Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAACGAAAGAATGGGGCTTAATTAAGAAACTCTCCACTGTGGTTAAGACTGATTCAGTGGGCAGTAAGGCTCAAAGTAAGCGTTTAGTTTACGCTCAAATGGACATTTCATTTGAATATGAGTGATAGAAGCTGCAGGAACTTTTACCAACCCTTTAGAAAATTCCGGACCCCATAAAGACAGCTTTGAAGAACATGCTCACTCACAGCTCTACAAGTCTTGGTTTGCAAATGAAGGGCTGAACTTGAGGAAAGAGTGGGTTTTATTTGTGTGCGTAGTAGATGATGAGGAGTTGTGGGTAAGATCAAGCAATGGGGAAGTGGATTAG mRNA sequence ATGAAAACGAAAGAATGGGGCTTAATTAAGAAACTCTCCACTGTGGTTAAGACTGATTCAGTGGGCAGTAAGGCTCAAAGAACTTTTACCAACCCTTTAGAAAATTCCGGACCCCATAAAGACAGCTTTGAAGAACATGCTCACTCACAGCTCTACAAGTCTTGGTTTGCAAATGAAGGGCTGAACTTGAGGAAAGAGTGGGTTTTATTTGTGTGCGTAGTAGATGATGAGGAGTTGTGGGTAAGATCAAGCAATGGGGAAGTGGATTAG Coding sequence (CDS) ATGAAAACGAAAGAATGGGGCTTAATTAAGAAACTCTCCACTGTGGTTAAGACTGATTCAGTGGGCAGTAAGGCTCAAAGAACTTTTACCAACCCTTTAGAAAATTCCGGACCCCATAAAGACAGCTTTGAAGAACATGCTCACTCACAGCTCTACAAGTCTTGGTTTGCAAATGAAGGGCTGAACTTGAGGAAAGAGTGGGTTTTATTTGTGTGCGTAGTAGATGATGAGGAGTTGTGGGTAAGATCAAGCAATGGGGAAGTGGATTAG Protein sequence MKTKEWGLIKKLSTVVKTDSVGSKAQRTFTNPLENSGPHKDSFEEHAHSQLYKSWFANEGLNLRKEWVLFVCVVDDEELWVRSSNGEVD
Homology
BLAST of CmoCh14G000780.1 vs. ExPASy TrEMBL
Match: A0A0A0LDH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732450 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.9e-04 Identity = 41/109 (37.61%), Postives = 54/109 (49.54%), Query Frame = 0
Query: 1 MKTKEWGLIKKLSTVVK---TDSVGSKAQ-----------------------RTFTNPLE 60
MKTKEWGLIK+LS V + DSVGSKAQ TFT PLE
Sbjct: 1 MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60
Query: 61 NSGPHKDSFEEHAHSQLYKSWFANEGLNLRKEWV-LFVCVVDDEELWVR 83
N GPHK + + + L + LR+++V L+V + EE W++
Sbjct: 61 NFGPHKKTLKNMLTTPLI---LGLQLKGLREDYVFLYVQIATGEEFWLK 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDH1 | 3.9e-04 | 37.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732450 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CmoCh14G000780.1:exon:6197 | CmoCh14G000780.1:exon:6197 | exon |
| CmoCh14G000780.1:exon:6196 | CmoCh14G000780.1:exon:6196 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CmoCh14G000780.1:cds | CmoCh14G000780.1:cds | CDS |
| CmoCh14G000780.1:cds | CmoCh14G000780.1:cds_2 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CmoCh14G000780.1 | CmoCh14G000780.1-protein | polypeptide |
|
