CmoCh12G010660.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G010660.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr12: 9824623 .. 9829145 (+)
Sequence length	1300
RNA-Seq Expression	CmoCh12G010660.1
Synteny	CmoCh12G010660.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAATTACCTTTAAACAAAGTCTCTTCACCGCCCGGTTCTCCACGAGGGAAGTCTCTCTTTCACTTCTCTTCCTCTCTGTTTATTACGCCGCCTCCGCCGCCGTCCGGCCGGAATCTTCACGCTCTCTCTTCGCCATTGGTTGCTTTGAGTTCCATTACTTTGTTTCTCTTCGCCATCTCTTCTTGTTCCCTCGTAGATTAATCGGCGAACAAAACTCTCTCTCTCTGTCTCTCTCTCGCATTCTCCCCGTTTCAAGTGAAAAACAGCGGGCGACGGAATCCGTCTTGGACCGAACAAGCTGATTCGAGTTGGAGTAATTGGAAATTTCAAAGAAGGTAAGGAAAATTTACGAGTCAATTTTTTGAATTAGAATGTTAAATTCTGTTGTTGTCAATTGATTTTACCGAAGAGTTCAATAGGTGCTGTACGGTGCAGATTTAGTTTTTGAAATATTTTCTATTATGATTCTTATGCTGTTTGATTAATCTTCGTCATCGCTCACGCCCAATTTTGAAATTGTTGTATGATTTCATTAACTTCCAGATTGTTCATACGCCCAATTCTGAAATGCTCTAGCAATTACAAAACTTATTTATTGGATTTTCAGAAATGGAGTTGATCACGAATTTAATATCCCTTAACTTAGACTTTCGCTTATGGATTTAGTAGCGATTTAACACTTTTACCTTAATCATTTTGCAGAATTTGAATGGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGGTAACCTTAACATTTTCTTCATTAGTTTTATATGAAGATTCTACTGCCATTTTCTCAATAGCTTTTAAAGAATCTTCAGGAAAGGAAAATTTCAACTCTCTACTTATTGGTATATCAGCTGGCTTAGAAAATGTGATTTGTAATAAGCTTCTATCAATCAAGCACGGTTGAATTGGTCTAGTAGTCAATAATGGTCGTGTAAATAACGAAGGGCTCAAAGAAAATGAGTTCAAGCTATGGTGGTTACCTGTCTAAGATTTAATATCTTACGAGTTACCTTGACAACTGAACGAAGTAGGGTTGTAAGATGGTCCTGTGAGAATAGTTAAGGGGCCAGCAAGTTTTCCGGAACGCTCGTATAAATCAAAATAAGATAAAAAGGATAAGGAACCTCTCGTGCATGACTTAGATTTGTATGTCTTTTCTCTTATTTTGTTCCACTTGATTGGTGTAAATATTTGATATTGGTAGCATTCAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCAGTTGCTTTCTGGCGTTCAGCAAGGACTTGGTGTGTGTTCTTTATCTGATATGATACTTGTCATCTGCTTCTACTGTTAGGATGCAGTGTTGTGTTTTGTAGTTATTGTTTTCGCCTTTGCAGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGATGCATCACTACTCATGACGGGTTGCAAAGTTCAAAGAAGTGTATGTTTTTCTCCCGACTTTCAACAAGCTAGTTCGTCGACATTTTAATGCTCGTATTGGCAAAATTGTTCCCTTTTGTTTTACGAACGAATGAAAGGGTAGTATCATTCTCTTTCTTCCAATTCCTCTCGTTTTTTCTATCTCACGATTTGGCTGTTTCTGTCAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAAAGTGCGGAAACTTCTCCCTAGGAGACACGTTTTAAAAACCTTGAAGGGTAGTCTAAAAGGGGAAGCCCAAATAGGACAATATCTGCTGCTGGTGGGCTTGAGCCGTTACAAATGGTATCAGCAGACACCGGGTGGTGTGCCAGCGAGGACTTTGGGCCCCGAAGGGGGTGAATTGTAAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTACCGTTTTAAAAACCTTAAGGGGAATCCCAAAAGGAAAAACCCCAAGAGGACAATATCTGCTACTGGTGGGCTTAGGCCGTTATAGTTTCAATTTCAATAAGATATATTTCATACTTTTGTAACTAACCACTTGCTTAAACTGATATTGTTTCGTCTTTACATTTCTTTTGATCTTCATTTGTTATTTCCCTAATTTCGTCGATTCATTTCTCGTGAACATATGCAGTGCATACGTGCCGGGTTGGACTGGATGATCATTTGAAAAAAGGTAGATAAAATGTTTCTATCAAGATTGAAGCTGTTTGCTATTTGTTGCATCCTGTAAGCATGTATGTTTTGTAATGTTTCTATCAAGATTGAAGCTGTTCGCTATGTTTTGTGAAAATTTTGTGTCCTTATGTCCTAAGGCACATTCTTCTGTTCTTTTTGTGGTTTATCATGTATGATAGTACTTAGAAGTAAATTCTCTAACTTTGTTACTGATATTTAACTATTTCATGGAACAACAGTGAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGATGTAAATATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATGTAGAATTGAATGATGAAGAAGCAACCATTCCTGATAAGGTAAACTGTGACTTCTATCTCTTAATAATAAATTGATTTTAGATTATTAACGACATATTTGAGAGTAATTGTGAGATCCCACGTTGGTTGGAGAGTGGAACGAAGCATTCTTTGTAAGGGTGTGGAAACCTTTCCTTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAAGGAAGGCCCAAGGAGGACAATATCTGCTAGCGGTGGGGTTGGACTGTTACAAATGGTATCAGAGCCAAACACAGGGCGGTGTGCGAACGAGGAAGTTGGGCCCTGAAGGGGGGTAGATTGTGAGATCCCACATTGGTTGGAGAGTGGAACGAAACATTCTTTATAAGGGTTTTGAAACCTCTCCCTAGCAGATGCGTTTTAAAAACCTTTGGGGAAGAACCTTTGGGGAAGTTGGAAAAGGAAGGCCCAAAGAGGACAATATCTGCTAGCGGTGGATTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCGGGCGGTGTACCAGCGAGGATGTTGGGCTCTGAAAGGAGGTGGATTGTGAGATCCTACCTCGGTTGGAGAGGGGAACAAAACATTCTTTACAAGAGTGTGGAAACCTCTCCCTAGCATACACGTTTTAAAAATTTTGAGGGGAAATCTGAAAGGGAAGGCCCAAAGAGAACAATATCTGCTAGAAGTGGGCTTGGGCGGTTACAAATGGTATCAGAGTCAGACATCGGGCGGTGTGCCAACGAGGATACTGGGCCCTGAAGGGGGGTGAATTGTGAGATCCCACCTCGGTTCAAGAGGGGAATGAAGCCTTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGGCTTAAAGAGGACAATATCTGTTAGCGGTAAGCTTGGACTGTTACAGAATTGAAAAACAGAATCACTCTCAAGCACGTTCTTAGATGTTGAAAACGTCATTTCGGCATGCATTTTTCTGTCCTCTTTTTAATCAATTTCTGCTTTGTTCAGAAACCTGATGCTAACGAATATGCTTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGTAATGTTTTTCCTCCTCTGTTATTTTTCCAGGTGAACATACAATGCTGTCTTTTTCTTTTCCGATAATCGTCGATCGAGGGCTCTACTTCTTGCATTATGATTACGTTCTCTCTTAATCTCGGGAGGTATCTCCGGAGAAATGCTACGTTCATTATCTAAACTGAAACTCATTGCAGGAGAAGATTATTTCTGGTCTAAGCCTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGATGACGAAATTTTGAAACGAGCTTGGAAACTCATTCCGTGAGTGTTAATATCTTTAATTCTGAATGATTTGGTCTATAAGATTTTGCTAAGTTTTAGTAAATTCTTATGGATCAACAAAATTTTGAAGTTGATTATGTGCTGAACTTTTTATAGATTAAATTATTTTCTTTTCTTGTGATAGATGAATTGTGTTCGTTCATATTTTGCAATGAGAATAAACTGTGGGCCCCACTCGAACATCTCGTGTAATTTCATTCCCTTCAAAAGGTACTCGATCTCATTTCTGTTGATTATTAGTGAGTTTGATACCATCTTATTGATGTTACCTAAATATTGACCTCGGTCTCGATTCACATCTCTTAGCCTAGAGTACAACAAAAGTCATCCCAGACGTACTCGATGGACTCGTTAAGCTTGTTATGCCCTAAGATATGTTGCATGACTAGTATTAGAAGTGTTAGTTGGGTCTGATAAGCTGGTTATCACATAGTTAAGCAACA

mRNA sequence

TTTAAAATTACCTTTAAACAAAGTCTCTTCACCGCCCGGTTCTCCACGAGGGAAGTCTCTCTTTCACTTCTCTTCCTCTCTGTTTATTACGCCGCCTCCGCCGCCGTCCGGCCGGAATCTTCACGCTCTCTCTTCGCCATTGGTTGCTTTGAGTTCCATTACTTTGTTTCTCTTCGCCATCTCTTCTTGTTCCCTCGTAGATTAATCGGCGAACAAAACTCTCTCTCTCTGTCTCTCTCTCGCATTCTCCCCGTTTCAAGTGAAAAACAGCGGGCGACGGAATCCGTCTTGGACCGAACAAGCTGATTCGAGTTGGAGTAATTGGAAATTTCAAAGAAGAATTTGAATGGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCAGTTGCTTTCTGGCGTTCAGCAAGGACTTGTTATTGTTTTCGCCTTTGCAGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGATGCATCACTACTCATGACGGGTTGCAAATGAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGATGTAAATATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATGTAGAATTGAATGATGAAGAAGCAACCATTCCTGATAAGAAACCTGATGCTAACGAATATGCTTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGAGAAGATTATTTCTGGTCTAAGCCTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGATGACGAAATTTTGAAACGAGCTTGGAAACTCATTCCATGAATTGTGTTCGTTCATATTTTGCAATGAGAATAAACTGTGGGCCCCACTCGAACATCTCGTGTAATTTCATTCCCTTCAAAAGGTACTCGATCTCATTTCTGTTGATTATTAGTGAGTTTGATACCATCTTATTGATGTTACCTAAATATTGACCTCGGTCTCGATTCACATCTCTTAGCCTAGAGTACAACAAAAGTCATCCCAGACGTACTCGATGGACTCGTTAAGCTTGTTATGCCCTAAGATATGTTGCATGACTAGTATTAGAAGTGTTAGTTGGGTCTGATAAGCTGGTTATCACATAGTTAAGCAACA

Coding sequence (CDS)

ATGGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCAGTTGCTTTCTGGCGTTCAGCAAGGACTTGTTATTGTTTTCGCCTTTGCAGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGATGCATCACTACTCATGACGGGTTGCAAATGAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGATGTAAATATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATGTAGAATTGAATGATGAAGAAGCAACCATTCCTGATAAGAAACCTGATGCTAACGAATATGCTTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGAGAAGATTATTTCTGGTCTAAGCCTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGATGACGAAATTTTGAAACGAGCTTGGAAACTCATTCCATGA

Protein sequence

MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQMRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILKRAWKLIP

Homology

[Close]

BLAST of CmoCh12G010660.1 vs. ExPASy TrEMBL
Match: A0A6J1FDP7 (uncharacterized protein LOC111444445 OS=Cucurbita moschata OX=3662 GN=LOC111444445 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.0e-87
Identity = 181/207 (87.44%), Postives = 182/207 (87.92%), Query Frame = 0


Query: 24  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSY 83
           SVGQLEELGTLGSQLLSGVQQGL       ELLRRPAINRTSKLIENVVETNNTESLRSY
Sbjct: 124 SVGQLEELGTLGSQLLSGVQQGL-------ELLRRPAINRTSKLIENVVETNNTESLRSY 183

Query: 84  FEAGCITTHDGLQ------------------MRSLTNELERLLDDVNIALEMENRLCAST 143
           FEAGCITTHDGLQ                  +RSLTNELERLLDDVNIALEMENRLCAST
Sbjct: 184 FEAGCITTHDGLQSSKKLHTCRVGLDDHLKKVRSLTNELERLLDDVNIALEMENRLCAST 243

Query: 144 VSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGE 203
           VSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGE
Sbjct: 244 VSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGE 303

Query: 204 LETYRLMWSLRPYIDDEILKRAWKLIP 213
           LETYRLMWSLRPYIDDEILKRAWKLIP
Sbjct: 304 LETYRLMWSLRPYIDDEILKRAWKLIP 323

[Close]

BLAST of CmoCh12G010660.1 vs. ExPASy TrEMBL
Match: A0A6J1HNU3 (uncharacterized protein LOC111465322 OS=Cucurbita maxima OX=3661 GN=LOC111465322 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81
Identity = 171/207 (82.61%), Postives = 177/207 (85.51%), Query Frame = 0


Query: 24  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSY 83
           SVGQLEELGTLGSQLLSGVQQGL       ELLRRPA+NRTSKLIENVVETNNTESLRSY
Sbjct: 52  SVGQLEELGTLGSQLLSGVQQGL-------ELLRRPALNRTSKLIENVVETNNTESLRSY 111

Query: 84  FEAGCITTHDGLQ------------------MRSLTNELERLLDDVNIALEMENRLCAST 143
           FEAGCITTH+GLQ                  +RSLTNELERLLDDVNIALEMEN   AST
Sbjct: 112 FEAGCITTHNGLQSSKKLHVCGVGLDDHLKKVRSLTNELERLLDDVNIALEMENPPSAST 171

Query: 144 VSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGE 203
           VSDEDE VELN EEATIPDKKPDANEYALLMGIIKVM+KKDHIMQEKI+SGLSLKSSSGE
Sbjct: 172 VSDEDEGVELNAEEATIPDKKPDANEYALLMGIIKVMIKKDHIMQEKIVSGLSLKSSSGE 231

Query: 204 LETYRLMWSLRPYIDDEILKRAWKLIP 213
           LETYRLMWSLRPYIDDEI+KRAWKLIP
Sbjct: 232 LETYRLMWSLRPYIDDEIMKRAWKLIP 251

[Close]

BLAST of CmoCh12G010660.1 vs. ExPASy TrEMBL
Match: A0A1S4E157 (uncharacterized protein LOC103495347 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.0e-74
Identity = 158/229 (69.00%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 1   MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPA 60
           MEEVK +HE +EKIF+IFKEFMASV +L+ELGT GSQLLSG++QGLVI    AELLRRP+
Sbjct: 1   MEEVKFDHESKEKIFEIFKEFMASVAKLDELGTQGSQLLSGLKQGLVIC-TLAELLRRPS 60

Query: 61  INRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTN 120
           IN TSKLIENV+ET+NTE+LR+Y EAGCI THDG Q                   RSL +
Sbjct: 61  INGTSKLIENVIETSNTENLRAYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLID 120

Query: 121 ELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVM 180
           ELERL +DVNI LE EN LC ST+S  DED+EL++EEAT+P KK DAN+YALLMGI+KVM
Sbjct: 121 ELERLHNDVNIELETENPLCTSTMS--DEDLELDEEEATVPSKKLDANDYALLMGIVKVM 180

Query: 181 VKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILKRAWKLI 212
           +KK+HIMQEKIISGLSLKSSSGELETY LMWSL+PYIDD I+  AWKL+
Sbjct: 181 IKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDGIMSWAWKLV 226

[Close]

BLAST of CmoCh12G010660.1 vs. ExPASy TrEMBL
Match: A0A0A0K2B6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069170 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.6e-74
Identity = 156/229 (68.12%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 1   MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPA 60
           MEEV+ +HE +EKIF+IFKEFMASV +L+ELGTLGSQLLSG++QGL       ELLRRP+
Sbjct: 1   MEEVQFDHESKEKIFQIFKEFMASVAKLDELGTLGSQLLSGLRQGL-------ELLRRPS 60

Query: 61  INRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTN 120
           IN TSKLIENV+E +NTE+LRSY EAGCI THDG Q                   RSL +
Sbjct: 61  INGTSKLIENVIEMSNTENLRSYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLID 120

Query: 121 ELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVM 180
           ELERL +DVNI LE EN LC ST+S  DED+EL++EEAT+P KKPDAN+YA+LMGI+KVM
Sbjct: 121 ELERLHNDVNIELETENPLCNSTMS--DEDLELDEEEATVPSKKPDANDYAVLMGIVKVM 180

Query: 181 VKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILKRAWKLI 212
           +KK+HIMQEKIISGLSLKSSSGELETY LMWSL+PYIDDEI++ AWKL+
Sbjct: 181 IKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDEIMRWAWKLV 220

[Close]

BLAST of CmoCh12G010660.1 vs. ExPASy TrEMBL
Match: A0A6J1D9B8 (uncharacterized protein LOC111018794 OS=Momordica charantia OX=3673 GN=LOC111018794 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.6e-74
Identity = 159/229 (69.43%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 1   MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPA 60
           MEEV  +H  +EKIFKIF+EFMASV +LEELGTLGS+ LSG QQGL       ELLRRPA
Sbjct: 1   MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL-------ELLRRPA 60

Query: 61  INRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTN 120
           INR+SKLIE+V+ETNNTE+L+SYFEAGCI THDG+Q                   RSL +
Sbjct: 61  INRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLID 120

Query: 121 ELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVM 180
           ELE LL++ NIALE EN   ASTVS  DEDVEL++EEAT+PD+K DANEYAL MGIIK M
Sbjct: 121 ELEHLLNNANIALETENSPRASTVS--DEDVELDEEEATVPDEKLDANEYALFMGIIKFM 180

Query: 181 VKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILKRAWKLI 212
           VKKD+IMQEKIISGLSLKSSSGELETY +MWSLRPYIDDEI++RAWKL+
Sbjct: 181 VKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV 220

[Close]

BLAST of CmoCh12G010660.1 vs. TAIR 10
Match: AT3G49645.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 162.2 bits (409), Expect = 4.7e-40
Identity = 97/222 (43.69%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 9   EPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLI 68
           E ++KI +IFK+FM  + QLEELG   +  L   QQGL         L+RP I  +SKLI
Sbjct: 6   ELKKKISEIFKDFMTVITQLEELGNAANNFLLRFQQGL-------SFLQRPPIVTSSKLI 65

Query: 69  ENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELERLLDD 128
           EN+++ N T  L+SY EAGCI  HD  Q                   ++L  ELERL D+
Sbjct: 66  ENIIKKNETRRLKSYIEAGCINIHDAAQSTRALHTSLSGLSDHLIKAKNLLIELERLTDE 125

Query: 129 VNIALEMENRLCASTVSDEDEDVELNDEEATIP-DKKPDANEYALLMGIIKVMVKKDHIM 188
             +A+E   +L   + SD  + V  ++E  T+   + P+  EYA L+ +I  M+K++++M
Sbjct: 126 AALAIESATQLDKDS-SDGLQQVTCDEENETVQLPQGPEVTEYAALIAVIYSMMKQNYVM 185

Query: 189 QEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILKRAWKLI 212
           Q+KI+  LSLKSSSGELETY LMWSLRP+++DEI+ RAWK I
Sbjct: 186 QDKIVRSLSLKSSSGELETYSLMWSLRPFVEDEIVNRAWKWI 219

The following BLAST results are available for this feature:

BLAST of CmoCh12G010660.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh12G010660.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDP7	4.0e-87	87.44	uncharacterized protein LOC111444445 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]
A0A6J1HNU3	2.5e-81	82.61	uncharacterized protein LOC111465322 OS=Cucurbita maxima OX=3661 GN=LOC111465322...	[more]
A0A1S4E157	3.0e-74	69.00	uncharacterized protein LOC103495347 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K2B6	6.6e-74	68.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069170 PE=4 SV=1	[more]
A0A6J1D9B8	8.6e-74	69.43	uncharacterized protein LOC111018794 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of CmoCh12G010660.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49645.1	4.7e-40	43.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..117
None	No IPR available	PANTHER	PTHR35305	FAD-BINDING PROTEIN	coord: 1..212

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh12G010660	CmoCh12G010660	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010660.1:exon:2422	CmoCh12G010660.1:exon:2422	exon
CmoCh12G010660.1:exon:2423	CmoCh12G010660.1:exon:2423	exon
CmoCh12G010660.1:exon:2424	CmoCh12G010660.1:exon:2424	exon
CmoCh12G010660.1:exon:2425	CmoCh12G010660.1:exon:2425	exon
CmoCh12G010660.1:exon:2426	CmoCh12G010660.1:exon:2426	exon
CmoCh12G010660.1:exon:2427	CmoCh12G010660.1:exon:2427	exon
CmoCh12G010660.1:exon:2428	CmoCh12G010660.1:exon:2428	exon
CmoCh12G010660.1:exon:2429	CmoCh12G010660.1:exon:2429	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010660.1:five_prime_utr	CmoCh12G010660.1:five_prime_utr	five_prime_UTR
CmoCh12G010660.1:five_prime_utr	CmoCh12G010660.1:five_prime_utr_2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds	CDS
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds_2	CDS
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds_3	CDS
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds_4	CDS
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds_5	CDS
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds_6	CDS
CmoCh12G010660.1:cds	CmoCh12G010660.1:cds_7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010660.1:three_prime_utr	CmoCh12G010660.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010660.1	CmoCh12G010660.1-protein	polypeptide