CmoCh12G009740.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G009740.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transcription elongation factor spt6
Location	Cmo_Chr12: 9077260 .. 9088751 (-)
Sequence length	5050
RNA-Seq Expression	CmoCh12G009740.1
Synteny	CmoCh12G009740.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGGGCTCCATTGCAGGTGCTCTCTGCTTCCAATTTCCTCCCTCCCCAATTCGTTCATCAGTTCTACTTCTTTCATTACTCTTCCATCTCCGTCAATGGGCAAGGCGGTGATCTCCGATGAAGAAGGTTTGTTCTTGTCTTTGTTCTTTCACTTTTCGCTTGGATTTTCTGGTTCTCTTTGCATTCTTCCCTCTCTTCTCACTCGGTTGTTTCTGTAGATGAGGTCGAATTGGACGACCGAGAGCCGCTTGACGGTGATGATGTCGACGGTCGTAATATGGAGGACGAGGAAGATGAAGAAGATGGTTTGTGTCTTTTTTCTTTATTTTTATCTGAAATTGTTGGTTGTATTTTTTTCTCGGATTTTCTTTTAGTGTCTTGGATGTTTTTGGGTATCTGTGGGTCGATTGGTGGTCAGTGTGTCGGTTCTTTATTTCTTTAATCTTTTGTTAGTAATATATTACTCCTCCCACCCGCTCTATTGTTCTCCAATTCGGTTATAGAGGATGAGAAACAGTGACAATTTTTCAATTTATGGCCAGAATTGTTGAGCTGGGGTGAGGACTAAGGGTGAAACTGAGGGTGTGGCATATTTGTAACTCGTTAGGGTATGTGGCGTATCCTAAGAGTTTCGTGAGTCAGTGATTGTCTAATGTTTAGGTCTTGCATTATCTATCAGTAGGTTGACTCGGCTTGAAGAAATTCGGATAAGTAACTCTTTTCATGCCTTCGGGGTATTCCTTCTAGCCATGGGTGATTTAAGGGGCGAATAGAAACTTCATGACGACTTTATGTCTTTAGATGTGTTTTAGGAATGATAGAAGTAATGAGACGTAGCAGGAACTGTTTTCGTGACCACGATGAATCACAAAGTTTCTAGCTACCTTCTGATGGGTCTTCTATTTATGCTGTGATGGGTGATTGCTTTGTATTTATAGCATCAGATCGAACTTTGTGATTACTGAGTTCTAAATGGCACTCTGCTCAATGCTTTTTCAATATAAGGCTCTATATTACTGAAAACATGTTTACACGTGCTCGGGAACAGTCTGGAGTCTTAGTCTTATATAGGCCATTCGGTAGTTTTCTCAAAAGATTGTCAGTAGTTCATTGGAAGAAATATCTTTGCTTCATATAGAAAAAAGAGTACTTCTTTTTTTCTGGGTTCTTGATTGAACTAGGAACATTTGTAACTGAAGTGCAATTGATAACTGGTGTATTGTAATGTATAGAAAGTGAGATACTTTATTGTGAGTTTATTTGGGGGAAGAGGAATTTTTTCTTCTTAATCTTTTCTCAATCGTCTCAGTTGATTATAGGTCTTAAGGTGAATGTGGATGAATGTTTTATTCTTTGCGTTATCCATAACAAGGTGTTGCACCTTTGCATTTTATGCATACAGGTATGCCCTTAGGTTAGGTCATAATTCTCGAGTGTCTTCATGTTGTAGCTTGGTCATTGAAAAGATTTAGACAGTATTTTTGTCTGGGAGGAAGGCTTACTTCTTGAAAGGGGGAAACTTTACTTTTATTCTATTCATGTTGATTAGAACTCAAGATTTCCCTTAACTATTAAATGGCAATTGAGAAGGATCATGATAATGTTTTATGGGAAGGGGTTGAATCGGGGAGAGGATTCCCATTTAGTCAATTAGATTAGAAGTATGTTTCGAGATCTTGCGAGAGATGCATTTTTTGAATTGGGGGAGGGGGACTTAGATTATAAGAGTGTTACCCTTTCTGTATTAACTTCCCCTTCATTAACTTCCAATGGAATATTCTTAAGCTATTTGATTTTAATTGGTGATCCCACATAATAGACATGAGGCTTTTAACGTAACTGCTCATATTTATGGAGTGCTCTTTAATGGAAAAGCTAAAATTTGTTGGTTAAATGCGATTATGGAAACATGCTAGATCTTTAGCTTGTAAAGAATTGTAGGATTTTTGACAATGCATATGATCATACAATGGGGTGTTCATGTGTATTATGCTTTGAAATTGAGATTCCTGTTATAGGGGTTTTGTAGTATTTCTTGGTTGATTCAAGCTAATTAGGGAGCCTACAAGTAATCTTTTCCTGGCTTTGAATGGGAAAGGATATTTCATCTTCCTATCTATGCTTTTAGAATGCTTATTTAATAAAATGGTTTTGATCTAAAAGGAAGAGTTAACCCCCCAATGTAAGGCATTGGAATGAATTTGTGGTCAAATAGCAATTATTCATCTTATCTTTTTCATTGTCTCTGTTTGCGGCAACAATTAATTTTAAATGTACGGTATTTTCTTTTGCTGGTAATAAGTCCTTTTTTATTTTATAGAAGAAGGACAAGATGAGTATGAAAAGGATGGTTTCATAGTCGATGATATCGAAGAAGAAGATGAAGATGTAGAGGAGAGGGAAGACAGTGATGATGAAAGGCAGAAGAAGAAGAAAAGGAAGAAAAAGTGAAGTTTACTCTCTGACTTAGTATAATAAATATTATTTTTATCTGAAATGGATTTTTTTTTCAACCTGTTCAAATGAGTTTGGTCTGTAACCTGAACTAATATAGACAGTAGGTCGAAGGTTGGTGCTTTAATTTTATTTGAATTATAATTTGTCAAACTGAATTTAGCAGTAGTAAGTGACGTGCACTTGACCAAGAGGTCAATGGTTCTGTCACTGGGTGACTTATCTGTCTGTCTCCTTTTATATTGGGTTTAACACTTCTGTATGGGTACTGGCCTCTATGACTTTTTGTTATTATCAGTTAGGCGTAGTTCTTTTGCATTGGAGACCTTTTTTAGGTTTGGGATCCTCTTGTGCAGGTTGTTTATTTTGTATACCCTTGTACATCCTTTTATTTTTCTCAATTAAAGTCTGATTTCTTATTTTAAAAAATCTCTGTATTGACATGAGATGATCTTCACTTTCTTAGGGAGGAATATGTACTTGATGAAGATGACTATGAACTCCTTGAGGACAACAATATTAGCATTCAACGGCCGAAGGTAGTGGTATTGGATTTTTATAATATTGCTTCATATTATTTATTTCTGAGCATTTTTATCATCTTTTTCAGGGGAGCAAAAAGTTTAAGAGGCTTAAAAAAGCTCGAAGGGACAATGTCGAGCCTTCTGGATTTTCTGATGATGAGGATTTTGTCGAAAGTAGTAGAGGCGGACGAACTGCAGAGGAAAAACTTAAACGTAGTTTGTTTGGTGATGATGAAGGTATGCTTTTGATTTCTTTTTATTACTGCCTAATTTCTACTGTAAGTACGCTAGGTACGTTTCTCATTGAGGTATCACTCTTAGTTACGTTTTGAAACATTATGGTGATTATTTGAAGCTCCACTTGAGGATATTGCCGAAGAGGAGGAACAACCTGAAGAGGAAGAAGATGCTGACATAGGAGATGAGGATGAAATGGCTGATTTCATTGTGGATGAAGAAGTTGATGAAGATGGGGCTCCCTTAAGGTTTTTTTTCCTTCATATATTTAGGGATCTCAGTCCACATCTTCTGGTGTTTTTATTAATTTTGTTGCCAATAACCATCTTATTGTACATATTTAACCTTAATTTATTAATTGTACGATCTAGGCGGAGGAAATTGAAGAAAAAGAAATCCAGACAAGCGCCTGGTGTTTCATCAACTGCTTTGCAGGAGGCACATGAAATTTTTGGTGATGTCGATGAGCTTCTTCAGCTTCGCAAAAGAGAATTGGATACTCATGAGTGGCGTGAAAAGAGATTAGAAGATGAATTTGAACCAATTGTAATTTCTGAGAAGTATATGACAGAAAAAGATGACCAGATAAGGGAGATTGATATGCCCGAAAGAATGCAGGTTTCTTTTCATATCAGAATATAATTTCATGTTGTATATTGGCATCTTCATGGGTTATTTATTTATTTTGTTGCCTTTATTTTAGATTTCAGAGGAAAGCACTGGGCCTCCTCCTACTATGGACGAGAGGCTGGAGGATGAGGAGGCTTCTTGGATACATGGTCATATTGCTAATGGAATGAACTCTTTATTTGGCAATGCCAGTGGACAAGACCTATCTGTAACAAAGGGTGACATTCTGCGGTTTCTGGATCTTGTACATGTCCAGAAATTAGATGTTAGTGGTCTCTTATCATTTATTAGCCTTAGTATTCTCATCTATACTTGTTTGTTCTAATATTTTTCTGTTCTGTTCTGTTCTGTTCTTTCTTTTAGATACCATTCATTGCCATGTATAGGAAGGAGGAAATCCTAAGCTTATTAAAAGATACAGAACATGAATCTGGTGATGATCAGGATAGAAATGAAAAAACACCCTCGTTAAAGTGGCATAAGGTCAGTAAAATTGTACTTGGAAGTAATGCTCCACTTATATGGACTTGAAAAACGTGAGATGCAATGTATATTTACTTTTCGTTGTAGATACTTTGGGCAATTCAAGACTTGGACAAAAAGTGGCTGCTTCTTCAAAAGCGGAAAAATGCTCTTAAATCATACTACAAGAAGCGTAATGACGAGGAGGCATGTAGGATTTATGATGAAACTAGACTGTCATTGAATAAACAGCTTTTTGATTCGGTCATGAAATCTCTCAAGGCAGCTGAATCAGAGAGAGAGGTAGATGATGTTGACTCAAAGTTCAATTTGCATTTTCCCCCTGGTGAAGTTGGTGTTGATGAAGGACAGTTCAAAAGGCCTAAGAGGAAATCACTATACAGTATATGTAGTAAGGCTGGCTTATGGGAGGTTGCAGGAAAATTTGGTTATAGCTCTGAGCAATTCGGGTTGCAGCTCTCCTTAGAAAAGATGGTCAGTATTATTTGATATGATTTTATCTGGAATCTTGAATACGGTGATAACACCTGTTCCATTTTTTAGAGGAATGATGAGTTGGAGGATCCAAAGGAAACACCTGAAGAGATGGCATCAAACTTTACCTGTGCGATGTTTGAGACTCCTCAAGCTGTTCTCAAGGGAGCTAGGCATATGGTATTATAGTTTTGTTTCCCTAGATTTAATTATAGAATGCGGTATAGAATATTTTCATGGTCTTCTCTGTCTCTTGTGATTTCAGGCAGCTATTGAGATTAGTTGTGAACCTTGTGTGAGGAAGCATGTCAGGAGCTACTATATGGACTATGCCGTGATATCAACAAGTCCTACATCAGATGGAAATGTTACAATAGATTCTTTTCATCAATTTTCAGCTGTTAAGTGGCTCCGTGAAAAGCCACTGAGTAGATTTGAGGATGCACAGTGGCTTCTTATTCAGAAGGCTGAAGAAGAAAAACTTCTGACTGTTACTCTCAAGCTACCCGAAAAACATTTAAATAAGTTGATAAATGATTTTAATGAATATTATCTGAGTGATGGTGTTAGCAAATCTGCTCAGCTGTGGAATGAGCAGAGAAAGTTGATATTGCAGGATGCACTTTCTGGTTTTCTTCTGCCTTCAATGGAGAAAGAGGCAAGAACCCTGATGACTAGTAAAGCAAAAAACTGGTTACTTATGGAATATGGAAAGAATTTATGGAATAAAGTATCTGTTGGTCCATATCAACACAAAGAAAATGATATTAGTTCTGATGAAGAGGCTGCCCCAAGGGTAATGGCATGCTGTTGGGGTCCTGGAAAGCCAGCTACCACCTTTGTGATGTTAGATTCAGCTGGTGAGGTTCTTGATGTTCTTTACACTGGATCTCTCACCATACGTTCTCAAAATGTGAATGATCAACAGCGGAAGAAAAATGATCAAGAGCGAGTTTTGAAGTTCATGACAGACCATCAACCACATGTCGTTGTTCTAGGAGCAGTTAATTTATCTTGTACCCGATTGAAAGATGATATTTATGAGGTTAGTGATCCAATAACTAGTGGTGCTGGTGCATATATTCTATAATGAGATTATAGTTTTTCCCTCTTTTAGGAATGGTATGTGCTTGTTTAGCAGAGGAGTGCAGCACAAAATTCATCTAAACTTGCTTTAATGTTATTTCACTACTGCAATTTGTTACCATCAATTCTCTCTTGTTGTCTTTAGTTTCTTTGGGGGTTGTAAATATATCATATGTATGGTGCTATCTAGTTTCTTTGGAGCCATTTTCCTTTTCATTATATCAATGAAATATGGTGCTATCTGTTGAATTATAAAAGATCACATAACTATATTGTATATAAGGACCTCGTGCTAATAGAATCCATTTCACGTTATGGTTTGATAATTTAGAAGTTTCTGGTGAGTGTTCTCAATTTTTGGTGTGCTACTTTTGAGAAAGGCCTTTATGTTGGAGCAATAGGACTTCTTAGTGAAATGGATTTATTTATCGAGTCCTTGGAATTTGGGTTGTTGGGAAGATTTGAATCAGTAATCTCTAACATGATTTGGTACTAACCTTATGGGTTTAGGCGATAACAACAAAGACACTTGAATTAAACCAAGTCTTCAAAGGTCCTTGATACTGTCTTCGGGAGACCAATTATCTCACAAGTTTAGAAATTATAAAAAGAATTTGGAGCCCATTGGCATTTATAGGTTGGCGAATTTCTTGTTTAAGATAGAGGTGTGATGAAACAATCTCTCTTAGCTCTAGTCGGGGGATGTTTCTCTTCTTGGTTTATTCATGTTTCTCTTTTAATAATGAATTTTATTTTCCATAGAAAATAAGTAGGGTTCAGACGACTTTGTAGTGGTTGAATAATAATAGTAATCCTTCTCAAGGATTTATTAAGATTCTGCATTTCCGCTCATAATTATTGAGTCACATACATTTGTTGGTCTTGTTTGCTCAGTTTCTGTTTAAATGTACAACATTCCAGATGGTACATATCATGTTATCGTTCCAGATGGTATGTATCATGTCATTCATTTGCTATTTTATTATTTTGTCAGATTATTTTTAAGATGGTGGAGGAGAATCCTAGAGATGTTGGACATGAGATGGATGGATTAAGCATTGTATATGGCGATGAGTCCCTTCCTCGTTTGTATGAAAATTCTAGGATTTCCTCTGATCAATTACAAGGGCAATCAGGTAGTACACTGGCTCTTTTTTTCTGTATTGATTTCTTTTTACTTTTGAACTTCTATTTTATTGTAAGTGATTTTATAAATTTCTTTTCTTATTAGGCATTGTGAAGCGTGCTGTTGCTCTTGGACGCTATCTGCAAAATCCTCTCGCTATGGTTGCAACACTTTGTGGTCCAGGAAGGGAGATCTTATCTTGGAAACTACATCCTTTGGAGAACTTCCTGACCCCAGATGACAAATACGGAATGGTTGAACAGGTTATGGTTAATGTAACCAACCAGGTTGGCCTGGACACTAATTTGGCTATAAGCCATGAATGGTTGTTCAGCCCATTGCAATTTATAGCTGGACTTGGACCTAGGAAGGCAGCTTCTTTGCAGAGATCCTTGGTGAGGGCTGGATCAATTTTCACACGGAAGGACTTTGTTACAGCACATGGTCTTGGTAAAAAGGTATTTGTTAATGCAGTTGGGTTCTTGCGTGTAAGGCGGAGTGGATTGGCTGCAAGCAGCAGCCAATTTATAGATTTATTGGATAATACGAGAATTCATCCTGAATCTTATGCTTTAGCGCAAGAATTAGCAAAAGATGTTTTTGATGAAGATGTTAAAGGTGACGCTAACGATGATGAGGATGCAGAGATGGCCATAGAGCATGTTAGAGACCGGCCTCATTTACTGAGGACTCTTGATGTTGATGAATATTCTAAGAGCAAGAATCGGGAAGATAAACGAGATACTTTTCTTGACATAAAAAGAGAACTGATGCAGGGCTTTCAGGATTGGCGTAAGCAATATGAAGAGCCCAGTCAGGATGAAGAGTTTTACATGATATCTGGTGAAACAGAAGATACCCTTGCGGAAGGGAAAATTGTGCAAGCTACAGTCCGCAAAGTACAAGGGCAAAGAGCAATTTGTGGACTTGAATCTGGATTGACTGGAATGCTTATGAAAGAAGATTATGAAGATGATTCTAGAGATATTTCTGACTTGTCTGATAGGTTACACGAGGGGGATATTGTTACTTGCAAGATTAAATCAATTCAGAAGAATAGGTATCAAGTTTTCCTTGTTTGTAAAGAGAGTGAGATGAGAAGTAATCGGCACCAGGTTACTCGAAATCTTGATCCCTACTATCATGAAGATCGAAGCAGCCTACAGAGTGAGCAAGACAAGTCCCGAAAAGAGAAGGAACTTGCGAAAAAGCTTTTCAAGCCAAGAATGATTGTTCACCCTCGTTTCCAGAATATAACAGCAGATGAAGCAATGGAGGTTTGTTTTTCTCTAAGAAACTTTGTCTTATTTTAAATTTTAGGTGTACAAAGTTAGGGACCCGAATGTCAATGAGTGAAGATAAAAACATTTTAAGTGGCTATACTTTATTGTTTAGTCACTTTAAAAGTCATGATAAACACCTTTCATCTGGTAAAATGACGATGGACTACCCCATACTACACAATCACACTTAAGAGCCTCAATAGTTGATAGTTACTAAGAAAAGGGAAGAATATTCTTAAAAGGACTTTTACTTGAGCTGTTTTGATTTCTATCTTTTACCAAGATGCTGTTTTGGTTGCATTTAATTATTGGGGCTTTATGATTGTTTCATGATAGCATTAAATATAGTTTCTTTCCTTGTTTTCAAGGCATTTCTTGGTTCATGATAGTATTATTTTTGGTCCTTTGAAACTAACAAATTTTCTCTCGATTTATGATCCTTCAATTTTCGATAAAATTGTATCTTTTTTTGGAAGTTCAAGAAGTTTCATGGCATATCTCCTTTCTGTAGATTATAGATTACCCAATGATTTTGTTTTTTAGCTGAGGTGTAAGCGGAACCAAATTCCTCTACACAGAAAAACGCCCTGCCATCCCTTTTCAACCAAAAATTCCAGTGGACAGTTAAAAAAAAAAAACTACTTCAAGACTTCCTGTTTCCCATAAAATTCCTCCATATTTTCAACATTTTGCAAGGAGTGCAACTGAGAATTGAAAAGTCCATGCTCCCTAGTCCACATTTTTAGAATCATCATGCTTGCATAAGATGCATTACGGGAGAAAATGCGCCCTAGAAGAATTTTGTGTGAGATAATCCGTTAAGATATATAATTATTTTCCTCAAAGTTTTAATATCTATAACTTAGAAAAGAAAGGGGAATGGTGGAATTATGGAGGTCAACAAATGATTAAAGAGAGATTTGGATGAGAAAATTTCGATGAAAAGAAAAACAGAACTCTTTTTAGGGAAAGGTAATGAGAAATGAAAAGTCTTTATCAATGCTCCCAATTCCACCAGGATAATATATATGAAGCCAGATGATCAATAATTTTAGGATTGTGCTTGTGTAAGATGCATCGCTGGAGAAAATGCACCCTAGAAGATTTTTGCGTGAGATGACACGCTCTAGAGATATAATTATTTTCTCAAAATTTTAACGTTAATAACTTGGAAAAGAAATGGGAATGGTGGAATTATGGAGGTAAACAAATGATTAAAGAGAGATTTGGAAGAGAATTCCAGAGGGGTCTCAAGTTCAAATACGACTAATCTGGTACCTAAGATGTTAACTCCACAAAATTTTGACAGAGGTGAGGTCATAAGATGAAAAGACTGTTTTGTAGCATGTTCAGTTAGAGAGGATTTAGAGGAATGGTGTTTTGTGGAACTGATTTTGGGGTCCATGTAAACCTTCTAGTTTATATTTAATACACGAGGGAAGTGATTTTATTTCTTGAATTTCATTTAGTGAAGAATAATGAGTCTTCGAGGATATTTGTTTGAAAATGGTTGATTAGTTTTTCCCCATAAATGTTACTTCTCGTGCACTTCATTCTCTTGTGAAGTCTATTCTAACATTCTTTTCTTTATGGCAGCTCTTATCTGACAAGGATCCTGGTGAAAGTATTGTGCGACCAAGTTCTCGTGGACCTTCTTTTTTGACTTTGACACTTAAAATTTACAATGGAGTATATGCTCACAAAGATATAGTTGAAGGTGGAAAGGAACATAAAGACATAACTAGCTTGTTGCGTATTGGGAAGACCTTGAAAATTGGGGAGGACACGTTCGAGGATTTGGACGAGGTTAGTGGTGTTCTGGTGGTCATATGTCAGCCTTCAATGTGATGCATGTCATAAGTTGTAGAAATTGTTAACGGCCTTTTTGGAATTGTTAATCTCTGGGCTTCTGCATTTAATATTAGAGAACTATCATATGATTGTGCAACTAACGTCTGCATGTCTTGATTTTTTGTTGAAGTTGACATGGCACCTCTATTGAGTCTCTCTTGTATGCCTCCCATAAATGCAGGTGATGGATCGCTATGTTGATCCCTTAGTTGCTCACTTAAAGACGATGCTAAGTTATCGCAAGTTCAGGAAGGGCACAAAAGCAGAAGTTGACGAACTTATGAAGATTGAGAAGTCAGAGTATCCAATGAGAATAGTTTACGGTTTTGGAATTTCTCACGAACATCCGGGTACATTCATTTTGACATACATACGAAGTACAAATCCACACCACGAGTATATTGGGCTCTATCCGAAGGGATTTAAATTTAGGAAAAGAATGTTTGAAGATATTGATAGGCTTGTGGCCTATTTTCAAAGGCACATTGATGATCCCCAGCATGATTCAGCACCATCGATTAGATCAGTTGCTGCTATGGTACCAATGCGGAGCCCTGCAACTGGTGGCTCTTCCGCAGCATCTGCAGGTAGCCCTTGGGGTGGTTCATCGCATGATGGTGGCTGGAGAAGCCAGTCATATGACAGGGATCGTTCTTCTACTCCTGGGTCTAGAACAGGTGAGGTCCACAGAATGTTGCTTTCAAAACTTATTTAATATTTTATGAGAACTATGAACTGCATTCAAATTACTTCTCTGCTCTAGGAATGTTCAGGTTGAATAATGTGATTAAACTTTAGCCTTAGATGGCTGAATGTAGTTTTTCCTCTTTCCTTATTGGATCCCTGTGGTTTTGGGTCCTGCTAGAGTTTCATAGCATTGTATGCCATTTCTTCTCCCAATTCATTTTAACCTTTTGATTTGTCATTATATTGTCTTGCAGGGCGACATGACAACAGAAATTCTGGTAGTCGTGATGGACATCCTAGTGGTCTGCCTAGACCATACGGTGGACGTGGGCGTGGTCGAGGCTCATACAATAACAATAGAGGGAACAATGAGAGGCCAGATTCTAGTTACGATTCCTCCAGGTGGGATTCATCTTCCAAGGATGGGGATGATGGATTGAGCAACTTCCCAGGAGCCAAAATTCAAAATTCACCAGGCAAAGAAGCCTTCCCCGGTGGCTGGAGCTCTGGTGGGAGTGGGGGTGGTGGTGGTAATGGATTAAGCGACAGTGGTGGCGGTGGCGGTGGTTGGGGTGGGACTGGGAATTCCAAAGGGAATTGGGGTGGTGGTGGTGGTGGTTCTGGTCCAAGTAACAGTGGGGGATGGGGTTCTTAA

mRNA sequence

GTTAGGGCTCCATTGCAGGTGCTCTCTGCTTCCAATTTCCTCCCTCCCCAATTCGTTCATCAGTTCTACTTCTTTCATTACTCTTCCATCTCCGTCAATGGGCAAGGCGGTGATCTCCGATGAAGAAGATGAGGTCGAATTGGACGACCGAGAGCCGCTTGACGGTGATGATGTCGACGGTCGTAATATGGAGGACGAGGAAGATGAAGAAGATGAAGAAGGACAAGATGAGTATGAAAAGGATGGTTTCATAGTCGATGATATCGAAGAAGAAGATGAAGATGTAGAGGAGAGGGAAGACAGTGATGATGAAAGGCAGAAGAAGAAGAAAAGGAAGAAAAACATTCAACGGCCGAAGGGGAGCAAAAAGTTTAAGAGGCTTAAAAAAGCTCGAAGGGACAATGTCGAGCCTTCTGGATTTTCTGATGATGAGGATTTTGTCGAAAGTAGTAGAGGCGGACGAACTGCAGAGGAAAAACTTAAACGTAGTTTGTTTGGTGATGATGAAGGTATGCTTTTGATTTCTTTTTATTACTGCCTAATTTCTACTGTAAGTACGCTAGCTCCACTTGAGGATATTGCCGAAGAGGAGGAACAACCTGAAGAGGAAGAAGATGCTGACATAGGAGATGAGGATGAAATGGCTGATTTCATTGTGGATGAAGAAGTTGATGAAGATGGGGCTCCCTTAAGGGATCTCAGTCCACATCTTCTGGTGTTTTTATTAATTTTGTTGCCAATAACCATCTTATTGTACATATTTAACCTTAATTTATTAATTGTACGATCTAGGCGGAGGAAATTGAAGAAAAAGAAATCCAGACAAGCGCCTGGTGTTTCATCAACTGCTTTGCAGGAGGCACATGAAATTTTTGGTGATGTCGATGAGCTTCTTCAGCTTCGCAAAAGAGAATTGGATACTCATGAGTGGCGTGAAAAGAGATTAGAAGATGAATTTGAACCAATTGTAATTTCTGAGAAGTATATGACAGAAAAAGATGACCAGATAAGGGAGATTGATATGCCCGAAAGAATGCAGATTTCAGAGGAAAGCACTGGGCCTCCTCCTACTATGGACGAGAGGCTGGAGGATGAGGAGGCTTCTTGGATACATGGTCATATTGCTAATGGAATGAACTCTTTATTTGGCAATGCCAGTGGACAAGACCTATCTGTAACAAAGGGTGACATTCTGCGGTTTCTGGATCTTGTACATGTCCAGAAATTAGATATACCATTCATTGCCATGTATAGGAAGGAGGAAATCCTAAGCTTATTAAAAGATACAGAACATGAATCTGGTGATGATCAGGATAGAAATGAAAAAACACCCTCGTTAAAGTGGCATAAGATACTTTGGGCAATTCAAGACTTGGACAAAAAGTGGCTGCTTCTTCAAAAGCGGAAAAATGCTCTTAAATCATACTACAAGAAGCGTAATGACGAGGAGGCATGTAGGATTTATGATGAAACTAGACTGTCATTGAATAAACAGCTTTTTGATTCGGTCATGAAATCTCTCAAGGCAGCTGAATCAGAGAGAGAGGTAGATGATGTTGACTCAAAGTTCAATTTGCATTTTCCCCCTGGTGAAGTTGGTGTTGATGAAGGACAGTTCAAAAGGCCTAAGAGGAAATCACTATACAGTATATGTAGTAAGGCTGGCTTATGGGAGGTTGCAGGAAAATTTGGTTATAGCTCTGAGCAATTCGGGTTGCAGCTCTCCTTAGAAAAGATGAGGAATGATGAGTTGGAGGATCCAAAGGAAACACCTGAAGAGATGGCATCAAACTTTACCTGTGCGATGTTTGAGACTCCTCAAGCTGTTCTCAAGGGAGCTAGGCATATGGCAGCTATTGAGATTAGTTGTGAACCTTGTGTGAGGAAGCATGTCAGGAGCTACTATATGGACTATGCCGTGATATCAACAAGTCCTACATCAGATGGAAATGTTACAATAGATTCTTTTCATCAATTTTCAGCTGTTAAGTGGCTCCGTGAAAAGCCACTGAGTAGATTTGAGGATGCACAGTGGCTTCTTATTCAGAAGGCTGAAGAAGAAAAACTTCTGACTGTTACTCTCAAGCTACCCGAAAAACATTTAAATAAGTTGATAAATGATTTTAATGAATATTATCTGAGTGATGGTGTTAGCAAATCTGCTCAGCTGTGGAATGAGCAGAGAAAGTTGATATTGCAGGATGCACTTTCTGGTTTTCTTCTGCCTTCAATGGAGAAAGAGGCAAGAACCCTGATGACTAGTAAAGCAAAAAACTGGTTACTTATGGAATATGGAAAGAATTTATGGAATAAAGTATCTGTTGGTCCATATCAACACAAAGAAAATGATATTAGTTCTGATGAAGAGGCTGCCCCAAGGGTAATGGCATGCTGTTGGGGTCCTGGAAAGCCAGCTACCACCTTTGTGATGTTAGATTCAGCTGGTGAGGTTCTTGATGTTCTTTACACTGGATCTCTCACCATACGTTCTCAAAATGTGAATGATCAACAGCGGAAGAAAAATGATCAAGAGCGAGTTTTGAAGTTCATGACAGACCATCAACCACATGTCGTTGTTCTAGGAGCAGTTAATTTATCTTGTACCCGATTGAAAGATGATATTTATGAGATTATTTTTAAGATGGTGGAGGAGAATCCTAGAGATGTTGGACATGAGATGGATGGATTAAGCATTGTATATGGCGATGAGTCCCTTCCTCGTTTGTATGAAAATTCTAGGATTTCCTCTGATCAATTACAAGGGCAATCAGGCATTGTGAAGCGTGCTGTTGCTCTTGGACGCTATCTGCAAAATCCTCTCGCTATGGTTGCAACACTTTGTGGTCCAGGAAGGGAGATCTTATCTTGGAAACTACATCCTTTGGAGAACTTCCTGACCCCAGATGACAAATACGGAATGGTTGAACAGGTTATGGTTAATGTAACCAACCAGGTTGGCCTGGACACTAATTTGGCTATAAGCCATGAATGGTTGTTCAGCCCATTGCAATTTATAGCTGGACTTGGACCTAGGAAGGCAGCTTCTTTGCAGAGATCCTTGGTGAGGGCTGGATCAATTTTCACACGGAAGGACTTTGTTACAGCACATGGTCTTGGTAAAAAGGTATTTGTTAATGCAGTTGGGTTCTTGCGTGTAAGGCGGAGTGGATTGGCTGCAAGCAGCAGCCAATTTATAGATTTATTGGATAATACGAGAATTCATCCTGAATCTTATGCTTTAGCGCAAGAATTAGCAAAAGATGTTTTTGATGAAGATGTTAAAGGTGACGCTAACGATGATGAGGATGCAGAGATGGCCATAGAGCATGTTAGAGACCGGCCTCATTTACTGAGGACTCTTGATGTTGATGAATATTCTAAGAGCAAGAATCGGGAAGATAAACGAGATACTTTTCTTGACATAAAAAGAGAACTGATGCAGGGCTTTCAGGATTGGCGTAAGCAATATGAAGAGCCCAGTCAGGATGAAGAGTTTTACATGATATCTGGTGAAACAGAAGATACCCTTGCGGAAGGGAAAATTGTGCAAGCTACAGTCCGCAAAGTACAAGGGCAAAGAGCAATTTGTGGACTTGAATCTGGATTGACTGGAATGCTTATGAAAGAAGATTATGAAGATGATTCTAGAGATATTTCTGACTTGTCTGATAGGTTACACGAGGGGGATATTGTTACTTGCAAGATTAAATCAATTCAGAAGAATAGGTATCAAGTTTTCCTTGTTTGTAAAGAGAGTGAGATGAGAAGTAATCGGCACCAGGTTACTCGAAATCTTGATCCCTACTATCATGAAGATCGAAGCAGCCTACAGAGTGAGCAAGACAAGTCCCGAAAAGAGAAGGAACTTGCGAAAAAGCTTTTCAAGCCAAGAATGATTGTTCACCCTCGTTTCCAGAATATAACAGCAGATGAAGCAATGGAGCTCTTATCTGACAAGGATCCTGGTGAAAGTATTGTGCGACCAAGTTCTCGTGGACCTTCTTTTTTGACTTTGACACTTAAAATTTACAATGGAGTATATGCTCACAAAGATATAGTTGAAGGTGGAAAGGAACATAAAGACATAACTAGCTTGTTGCGTATTGGGAAGACCTTGAAAATTGGGGAGGACACGTTCGAGGATTTGGACGAGGTGATGGATCGCTATGTTGATCCCTTAGTTGCTCACTTAAAGACGATGCTAAGTTATCGCAAGTTCAGGAAGGGCACAAAAGCAGAAGTTGACGAACTTATGAAGATTGAGAAGTCAGAGTATCCAATGAGAATAGTTTACGGTTTTGGAATTTCTCACGAACATCCGGGTACATTCATTTTGACATACATACGAAGTACAAATCCACACCACGAGTATATTGGGCTCTATCCGAAGGGATTTAAATTTAGGAAAAGAATGTTTGAAGATATTGATAGGCTTGTGGCCTATTTTCAAAGGCACATTGATGATCCCCAGCATGATTCAGCACCATCGATTAGATCAGTTGCTGCTATGGTACCAATGCGGAGCCCTGCAACTGGTGGCTCTTCCGCAGCATCTGCAGGTAGCCCTTGGGGTGGTTCATCGCATGATGGTGGCTGGAGAAGCCAGTCATATGACAGGGATCGTTCTTCTACTCCTGGGTCTAGAACAGGGCGACATGACAACAGAAATTCTGGTAGTCGTGATGGACATCCTAGTGGTCTGCCTAGACCATACGGTGGACGTGGGCGTGGTCGAGGCTCATACAATAACAATAGAGGGAACAATGAGAGGCCAGATTCTAGTTACGATTCCTCCAGGTGGGATTCATCTTCCAAGGATGGGGATGATGGATTGAGCAACTTCCCAGGAGCCAAAATTCAAAATTCACCAGGCAAAGAAGCCTTCCCCGGTGGCTGGAGCTCTGGTGGGAGTGGGGGTGGTGGTGGTAATGGATTAAGCGACAGTGGTGGCGGTGGCGGTGGTTGGGGTGGGACTGGGAATTCCAAAGGGAATTGGGGTGGTGGTGGTGGTGGTTCTGGTCCAAGTAACAGTGGGGGATGGGGTTCTTAA

Coding sequence (CDS)

ATGGGCAAGGCGGTGATCTCCGATGAAGAAGATGAGGTCGAATTGGACGACCGAGAGCCGCTTGACGGTGATGATGTCGACGGTCGTAATATGGAGGACGAGGAAGATGAAGAAGATGAAGAAGGACAAGATGAGTATGAAAAGGATGGTTTCATAGTCGATGATATCGAAGAAGAAGATGAAGATGTAGAGGAGAGGGAAGACAGTGATGATGAAAGGCAGAAGAAGAAGAAAAGGAAGAAAAACATTCAACGGCCGAAGGGGAGCAAAAAGTTTAAGAGGCTTAAAAAAGCTCGAAGGGACAATGTCGAGCCTTCTGGATTTTCTGATGATGAGGATTTTGTCGAAAGTAGTAGAGGCGGACGAACTGCAGAGGAAAAACTTAAACGTAGTTTGTTTGGTGATGATGAAGGTATGCTTTTGATTTCTTTTTATTACTGCCTAATTTCTACTGTAAGTACGCTAGCTCCACTTGAGGATATTGCCGAAGAGGAGGAACAACCTGAAGAGGAAGAAGATGCTGACATAGGAGATGAGGATGAAATGGCTGATTTCATTGTGGATGAAGAAGTTGATGAAGATGGGGCTCCCTTAAGGGATCTCAGTCCACATCTTCTGGTGTTTTTATTAATTTTGTTGCCAATAACCATCTTATTGTACATATTTAACCTTAATTTATTAATTGTACGATCTAGGCGGAGGAAATTGAAGAAAAAGAAATCCAGACAAGCGCCTGGTGTTTCATCAACTGCTTTGCAGGAGGCACATGAAATTTTTGGTGATGTCGATGAGCTTCTTCAGCTTCGCAAAAGAGAATTGGATACTCATGAGTGGCGTGAAAAGAGATTAGAAGATGAATTTGAACCAATTGTAATTTCTGAGAAGTATATGACAGAAAAAGATGACCAGATAAGGGAGATTGATATGCCCGAAAGAATGCAGATTTCAGAGGAAAGCACTGGGCCTCCTCCTACTATGGACGAGAGGCTGGAGGATGAGGAGGCTTCTTGGATACATGGTCATATTGCTAATGGAATGAACTCTTTATTTGGCAATGCCAGTGGACAAGACCTATCTGTAACAAAGGGTGACATTCTGCGGTTTCTGGATCTTGTACATGTCCAGAAATTAGATATACCATTCATTGCCATGTATAGGAAGGAGGAAATCCTAAGCTTATTAAAAGATACAGAACATGAATCTGGTGATGATCAGGATAGAAATGAAAAAACACCCTCGTTAAAGTGGCATAAGATACTTTGGGCAATTCAAGACTTGGACAAAAAGTGGCTGCTTCTTCAAAAGCGGAAAAATGCTCTTAAATCATACTACAAGAAGCGTAATGACGAGGAGGCATGTAGGATTTATGATGAAACTAGACTGTCATTGAATAAACAGCTTTTTGATTCGGTCATGAAATCTCTCAAGGCAGCTGAATCAGAGAGAGAGGTAGATGATGTTGACTCAAAGTTCAATTTGCATTTTCCCCCTGGTGAAGTTGGTGTTGATGAAGGACAGTTCAAAAGGCCTAAGAGGAAATCACTATACAGTATATGTAGTAAGGCTGGCTTATGGGAGGTTGCAGGAAAATTTGGTTATAGCTCTGAGCAATTCGGGTTGCAGCTCTCCTTAGAAAAGATGAGGAATGATGAGTTGGAGGATCCAAAGGAAACACCTGAAGAGATGGCATCAAACTTTACCTGTGCGATGTTTGAGACTCCTCAAGCTGTTCTCAAGGGAGCTAGGCATATGGCAGCTATTGAGATTAGTTGTGAACCTTGTGTGAGGAAGCATGTCAGGAGCTACTATATGGACTATGCCGTGATATCAACAAGTCCTACATCAGATGGAAATGTTACAATAGATTCTTTTCATCAATTTTCAGCTGTTAAGTGGCTCCGTGAAAAGCCACTGAGTAGATTTGAGGATGCACAGTGGCTTCTTATTCAGAAGGCTGAAGAAGAAAAACTTCTGACTGTTACTCTCAAGCTACCCGAAAAACATTTAAATAAGTTGATAAATGATTTTAATGAATATTATCTGAGTGATGGTGTTAGCAAATCTGCTCAGCTGTGGAATGAGCAGAGAAAGTTGATATTGCAGGATGCACTTTCTGGTTTTCTTCTGCCTTCAATGGAGAAAGAGGCAAGAACCCTGATGACTAGTAAAGCAAAAAACTGGTTACTTATGGAATATGGAAAGAATTTATGGAATAAAGTATCTGTTGGTCCATATCAACACAAAGAAAATGATATTAGTTCTGATGAAGAGGCTGCCCCAAGGGTAATGGCATGCTGTTGGGGTCCTGGAAAGCCAGCTACCACCTTTGTGATGTTAGATTCAGCTGGTGAGGTTCTTGATGTTCTTTACACTGGATCTCTCACCATACGTTCTCAAAATGTGAATGATCAACAGCGGAAGAAAAATGATCAAGAGCGAGTTTTGAAGTTCATGACAGACCATCAACCACATGTCGTTGTTCTAGGAGCAGTTAATTTATCTTGTACCCGATTGAAAGATGATATTTATGAGATTATTTTTAAGATGGTGGAGGAGAATCCTAGAGATGTTGGACATGAGATGGATGGATTAAGCATTGTATATGGCGATGAGTCCCTTCCTCGTTTGTATGAAAATTCTAGGATTTCCTCTGATCAATTACAAGGGCAATCAGGCATTGTGAAGCGTGCTGTTGCTCTTGGACGCTATCTGCAAAATCCTCTCGCTATGGTTGCAACACTTTGTGGTCCAGGAAGGGAGATCTTATCTTGGAAACTACATCCTTTGGAGAACTTCCTGACCCCAGATGACAAATACGGAATGGTTGAACAGGTTATGGTTAATGTAACCAACCAGGTTGGCCTGGACACTAATTTGGCTATAAGCCATGAATGGTTGTTCAGCCCATTGCAATTTATAGCTGGACTTGGACCTAGGAAGGCAGCTTCTTTGCAGAGATCCTTGGTGAGGGCTGGATCAATTTTCACACGGAAGGACTTTGTTACAGCACATGGTCTTGGTAAAAAGGTATTTGTTAATGCAGTTGGGTTCTTGCGTGTAAGGCGGAGTGGATTGGCTGCAAGCAGCAGCCAATTTATAGATTTATTGGATAATACGAGAATTCATCCTGAATCTTATGCTTTAGCGCAAGAATTAGCAAAAGATGTTTTTGATGAAGATGTTAAAGGTGACGCTAACGATGATGAGGATGCAGAGATGGCCATAGAGCATGTTAGAGACCGGCCTCATTTACTGAGGACTCTTGATGTTGATGAATATTCTAAGAGCAAGAATCGGGAAGATAAACGAGATACTTTTCTTGACATAAAAAGAGAACTGATGCAGGGCTTTCAGGATTGGCGTAAGCAATATGAAGAGCCCAGTCAGGATGAAGAGTTTTACATGATATCTGGTGAAACAGAAGATACCCTTGCGGAAGGGAAAATTGTGCAAGCTACAGTCCGCAAAGTACAAGGGCAAAGAGCAATTTGTGGACTTGAATCTGGATTGACTGGAATGCTTATGAAAGAAGATTATGAAGATGATTCTAGAGATATTTCTGACTTGTCTGATAGGTTACACGAGGGGGATATTGTTACTTGCAAGATTAAATCAATTCAGAAGAATAGGTATCAAGTTTTCCTTGTTTGTAAAGAGAGTGAGATGAGAAGTAATCGGCACCAGGTTACTCGAAATCTTGATCCCTACTATCATGAAGATCGAAGCAGCCTACAGAGTGAGCAAGACAAGTCCCGAAAAGAGAAGGAACTTGCGAAAAAGCTTTTCAAGCCAAGAATGATTGTTCACCCTCGTTTCCAGAATATAACAGCAGATGAAGCAATGGAGCTCTTATCTGACAAGGATCCTGGTGAAAGTATTGTGCGACCAAGTTCTCGTGGACCTTCTTTTTTGACTTTGACACTTAAAATTTACAATGGAGTATATGCTCACAAAGATATAGTTGAAGGTGGAAAGGAACATAAAGACATAACTAGCTTGTTGCGTATTGGGAAGACCTTGAAAATTGGGGAGGACACGTTCGAGGATTTGGACGAGGTGATGGATCGCTATGTTGATCCCTTAGTTGCTCACTTAAAGACGATGCTAAGTTATCGCAAGTTCAGGAAGGGCACAAAAGCAGAAGTTGACGAACTTATGAAGATTGAGAAGTCAGAGTATCCAATGAGAATAGTTTACGGTTTTGGAATTTCTCACGAACATCCGGGTACATTCATTTTGACATACATACGAAGTACAAATCCACACCACGAGTATATTGGGCTCTATCCGAAGGGATTTAAATTTAGGAAAAGAATGTTTGAAGATATTGATAGGCTTGTGGCCTATTTTCAAAGGCACATTGATGATCCCCAGCATGATTCAGCACCATCGATTAGATCAGTTGCTGCTATGGTACCAATGCGGAGCCCTGCAACTGGTGGCTCTTCCGCAGCATCTGCAGGTAGCCCTTGGGGTGGTTCATCGCATGATGGTGGCTGGAGAAGCCAGTCATATGACAGGGATCGTTCTTCTACTCCTGGGTCTAGAACAGGGCGACATGACAACAGAAATTCTGGTAGTCGTGATGGACATCCTAGTGGTCTGCCTAGACCATACGGTGGACGTGGGCGTGGTCGAGGCTCATACAATAACAATAGAGGGAACAATGAGAGGCCAGATTCTAGTTACGATTCCTCCAGGTGGGATTCATCTTCCAAGGATGGGGATGATGGATTGAGCAACTTCCCAGGAGCCAAAATTCAAAATTCACCAGGCAAAGAAGCCTTCCCCGGTGGCTGGAGCTCTGGTGGGAGTGGGGGTGGTGGTGGTAATGGATTAAGCGACAGTGGTGGCGGTGGCGGTGGTTGGGGTGGGACTGGGAATTCCAAAGGGAATTGGGGTGGTGGTGGTGGTGGTTCTGGTCCAAGTAACAGTGGGGGATGGGGTTCTTAA

Protein sequence

MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEEDEDVEEREDSDDERQKKKKRKKNIQRPKGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYGGRGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGGNGLSDSGGGGGGWGGTGNSKGNWGGGGGGSGPSNSGGWGS

Homology

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BLAST of CmoCh12G009740.1 vs. ExPASy Swiss-Prot
Match: A8MS85 (Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=SPT6 PE=1 SV=1)

HSP 1 Score: 1974.5 bits (5114), Expect = 0.0e+00
Identity = 1123/1698 (66.14%), Postives = 1300/1698 (76.56%), Query Frame = 0


Query: 1    MGKAVISDEEDEVEL--DDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIV--DDI 60
            M +  ISD+E++ EL  DD EP+ GD  +    +DEED++D    +EYE DGFIV  +D 
Sbjct: 1    MARNAISDDEEDHELEDDDGEPVHGDPAEHDENDDEEDDDDV--GNEYENDGFIVNDEDE 60

Query: 61   EEEDEDVEEREDSDDERQKKKKRKK-----------------NIQRPKGSKKFKRLKKAR 120
            EEE+E+ EER+DSD+ERQKKKK++K                 N++  K  +++KRLKKA+
Sbjct: 61   EEEEEEDEERKDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK--RQYKRLKKAQ 120

Query: 121  RDNVEPSGFSDDEDFVESSRGG--RTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAP 180
            R+     G S D++F   SRGG  R+AE+K+K  LF D                V    P
Sbjct: 121  REQGNGQGESSDDEF--DSRGGTRRSAEDKIKDRLFDD----------------VDVDDP 180

Query: 181  LEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITI 240
             +D+ +EE+   EE+   +G EDEMADFIVDE+ DE G P                    
Sbjct: 181  PDDVGDEEDLVVEED--VVGSEDEMADFIVDED-DEHGPP-------------------- 240

Query: 241  LLYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHE 300
                          +R   KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L +++
Sbjct: 241  --------------KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQ 300

Query: 301  WREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASW 360
              E+RLEDEFEP V+SEKYMT  DD+IR++D+PERMQISEESTG PP +DE   +EE++W
Sbjct: 301  RMERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPP-VDEISIEEESNW 360

Query: 361  IHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDT 420
            I+  +A+ +    G   G+  SV K DI +FL+L HVQKL+IPFIAMYRKE+  SLL   
Sbjct: 361  IYAQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL--- 420

Query: 421  EHESGDDQDRNE-KTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIY 480
              ++GD    N+ K P  KWHK+ W I DLDKKWLLL+KRK AL  YY KR +EE+ R+Y
Sbjct: 421  --DTGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVY 480

Query: 481  DETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLY 540
            DETRL+LN+ LF+SV+KSLK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS Y
Sbjct: 481  DETRLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQY 540

Query: 541  SICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQA 600
            SICSKAGLWEVA KFGYS+EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   A
Sbjct: 541  SICSKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLA 600

Query: 601  VLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREK 660
            VLKGARHMAA+EISCEP V+K+VR  YM+ AV+STSPT+DGN  IDSFHQFS +KWLREK
Sbjct: 601  VLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREK 660

Query: 661  PLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQR 720
            PLS+FE AQWLLIQK EEEKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQR
Sbjct: 661  PLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQR 720

Query: 721  KLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDE 780
            KLIL+DAL  FLLPSMEKEAR+L+TS+AK+ LL EYG+ LWNKVS GPYQ KE DI+ DE
Sbjct: 721  KLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDE 780

Query: 781  EAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLK 840
            EAAPRVMACCWGPGKP  TFVMLDS+GEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLK
Sbjct: 781  EAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLK 840

Query: 841  FMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRL 900
            FM DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRL
Sbjct: 841  FMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRL 900

Query: 901  YENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPD 960
            YENSRIS +QL  QSG V+RAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFL  D
Sbjct: 901  YENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLD 960

Query: 961  DKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFT 1020
            +KYGMVEQVMV++TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF 
Sbjct: 961  EKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFV 1020

Query: 1021 RKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDV 1080
            RKD +  HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLD+TRIHPESY+LAQELAKD+
Sbjct: 1021 RKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDI 1080

Query: 1081 FDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQ 1140
            +DEDV+GD+NDDEDA EMAIEHVRDRP  LR + +DEY  SK RE+K++T+ +I REL  
Sbjct: 1081 YDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSC 1140

Query: 1141 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLM 1200
            GFQDWR  ++EPS DEEFYMISGETEDT+AEG+IVQA+VR++Q  RAIC L+SGLTGMLM
Sbjct: 1141 GFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLM 1200

Query: 1201 KEDYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDP 1260
            KED+ DD RDI DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ  +N+D 
Sbjct: 1201 KEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDA 1260

Query: 1261 YYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1320
            YYHEDR+SLQ  ++K+RKEKEL +K FK RMIVHPRFQNITAD+A E LSDKD GESIVR
Sbjct: 1261 YYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVR 1320

Query: 1321 PSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1380
            PSSRG +FLTLTLKIY+GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMD
Sbjct: 1321 PSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMD 1380

Query: 1381 RYVDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTY 1440
            RYVDPLV+HLKTML+YRKFRKGTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL+Y
Sbjct: 1381 RYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSY 1440

Query: 1441 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1500
            IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMR
Sbjct: 1441 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMR 1500

Query: 1501 SPATGGSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGL 1560
            SPA  GS   S GS WG S  +GGW+  S DR  S   G      + RN G RDGHPSG 
Sbjct: 1501 SPADHGS---SGGSGWGSSQSEGGWKGNS-DRSGSGRGG------EYRNGGGRDGHPSGA 1560

Query: 1561 PRPYGGRGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKE- 1620
            PRPYGGRGRGRG    +  N++R D + D    D+ + DG  G S   G     S GK+ 
Sbjct: 1561 PRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTADGGWGNSG-GGGWGSESAGKKT 1618

Query: 1621 --AFPGGW--SSGG--SGGGGGNGLSDSGGGGGGWG----------------GTGNSKGN 1651
                 GGW   SGG  S G G  G    GGG GGWG                G+G    +
Sbjct: 1621 GGGSTGGWGSESGGNKSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSD 1618

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BLAST of CmoCh12G009740.1 vs. ExPASy Swiss-Prot
Match: Q9CAM1 (Transcription elongation factor SPT6-like OS=Arabidopsis thaliana OX=3702 GN=At1g63210 PE=1 SV=2)

HSP 1 Score: 1538.1 bits (3981), Expect = 0.0e+00
Identity = 849/1446 (58.71%), Postives = 1067/1446 (73.79%), Query Frame = 0


Query: 15   LDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEEDEDVEEREDSDDERQ 74
            +D+   +  D V+ R    EED+EDE+ Q E++ DGF+V+  ++ +E+ E+R  S  E++
Sbjct: 4    IDEEPQIHEDPVENR----EEDDEDEDDQYEFD-DGFLVNGSDDGEEEEEQRHCS--EKK 63

Query: 75   KKKKRKKNIQRPKGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFG 134
             + +RKK+         +  LK             D+ D  +     R   ++LK+S   
Sbjct: 64   SRSRRKKDESFTLHEDDYLLLK-------------DNNDTFQ-----RNKYKRLKKS--- 123

Query: 135  DDEGMLLISFYYCLISTVSTLAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDED 194
                                       +EEE++   ++     D+D+++ FIVDE  D+ 
Sbjct: 124  ---------------------------SEEEDKINNDD-----DDDDLSHFIVDE--DDH 183

Query: 195  GAPLRDLSPHLLVFLLILLPITILLYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQE 254
            GA                                     + +++KK +   G  S AL+ 
Sbjct: 184  GA-------------------------------------QGMRRKKMKYKQGTDSNALRY 243

Query: 255  AHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQ 314
            A+++FGD +ELL+LRK++L  +E  E++LEDEFEP+V+SEKYMTEKDD+IR++D+PERMQ
Sbjct: 244  ANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPMVLSEKYMTEKDDEIRKLDVPERMQ 303

Query: 315  ISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHV 374
            I EE+ G   ++D+    EE++WI+  +            GQ   + K DI++FL++ HV
Sbjct: 304  IFEEAIG-IVSLDDMSIQEESNWIYARLL--------QEQGQGCLINKDDIVKFLEMFHV 363

Query: 375  QKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRN-EKTPSLKWHKILWAIQDLDKKWLLL 434
            QKL+IPFIAMYRKE+  SLL D+  +  D  D N +K    KWHK+LW IQDLD+KW+LL
Sbjct: 364  QKLEIPFIAMYRKEQCRSLL-DSSDDDHDGSDFNLDKKLETKWHKVLWMIQDLDRKWVLL 423

Query: 435  QKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNL 494
            +KRK AL  YY KR +EE C         LNK LF+SV+KSL+AAE+EREVDDVDSKFNL
Sbjct: 424  RKRKTALFGYYTKRFEEETC------MSDLNKSLFESVIKSLQAAETEREVDDVDSKFNL 483

Query: 495  HFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELE 554
            HFP  E  +DEGQ+KRP RKS YSICSK G+ E A KFGYS+EQ GL LSLEK+  DELE
Sbjct: 484  HFPHCE--IDEGQYKRPNRKSQYSICSKFGIKEFANKFGYSAEQLGLALSLEKVFVDELE 543

Query: 555  DPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSP 614
            D K+TPEEMA N+ CAMF   QAVLKGARHMAA+EISCEP +RK+VR  +M+ AV+STSP
Sbjct: 544  DAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPSIRKYVRGIFMENAVVSTSP 603

Query: 615  TSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLI 674
            T DGNV IDSFH+FSAVKWL EKPL +F+  QWLLIQKAEEEKLL VT KLPE  +N++I
Sbjct: 604  TPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEEEKLLQVTFKLPENQMNRII 663

Query: 675  NDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYG 734
            ++ +E+YLS GVSK AQLWNEQRKLIL+DA+ GF+LPSMEKEAR+L+TS+AK  LL EYG
Sbjct: 664  SECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEKEARSLLTSRAKTQLLSEYG 723

Query: 735  KNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGS 794
            + LWNKVS GPY+   N  +S+EEAAPRV+ACCWGPG P TTFVMLDS+GE++DVLY+GS
Sbjct: 724  QVLWNKVSSGPYRRNNN--TSEEEAAPRVLACCWGPGNPETTFVMLDSSGELVDVLYSGS 783

Query: 795  LTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEEN 854
            + +RS++VNDQ+RKK DQ+R LKF+ DHQP V+ L AVNLSC RLKD+IYE IF+MVEE 
Sbjct: 784  IGLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLSCVRLKDEIYEAIFQMVEEL 843

Query: 855  PRD-VGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVA 914
            P + V   +    +VY DESLPRLYENSRISS+QL  Q+GIVKRAV+LGRYLQNPLAM++
Sbjct: 844  PLNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAGIVKRAVSLGRYLQNPLAMIS 903

Query: 915  TLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQF 974
            TLCGPGR+ILSWKLH  ++FL PD+KY MVEQVMV++TNQVG+D NLA SHEWLFSPLQF
Sbjct: 904  TLCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQVGIDINLAASHEWLFSPLQF 963

Query: 975  IAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQF 1034
            ++GLGPRKAASLQ+SLVRAGSIF RK+ +  HG+GKKVFVNA GFLR+RRSGLA SSSQF
Sbjct: 964  VSGLGPRKAASLQKSLVRAGSIFVRKELIN-HGIGKKVFVNAAGFLRIRRSGLACSSSQF 1023

Query: 1035 IDLLDNTRIHPESYALAQELAKDVFDED-VKGDANDDEDAEMAIEHVRDRPHLLRTLDVD 1094
            IDLLD+TRIHPESY LAQELAKDV+  D V+GD  +D+  EMAIEHVRD P  LR + +D
Sbjct: 1024 IDLLDDTRIHPESYGLAQELAKDVYAHDTVRGD--EDDAIEMAIEHVRDEPASLRKIVLD 1083

Query: 1095 EYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQ 1154
            EY +SKN+E+K++T+  I REL  GFQDWR  ++E   DEEFYMISGET++T+ EG+IVQ
Sbjct: 1084 EYLRSKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEEFYMISGETKETIGEGRIVQ 1143

Query: 1155 ATVRKVQGQRAICGLESGLTGMLMKEDYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRY 1214
            ATV+KV   +A C L+ GL G+L+KEDY DD RDI DLS++L EGDIVTCK+KSI K RY
Sbjct: 1144 ATVKKVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNKLCEGDIVTCKVKSILKQRY 1203

Query: 1215 QVFLVCKESEMRSNRHQVTRNLDPYYHED-RSSLQSEQDKSRKEKELAKKLFKPRMIVHP 1274
             V LVCKESEMR  +H+   ++D YYHE+ R+S+  E++K  KE    KK FK RMIVHP
Sbjct: 1204 HVLLVCKESEMR--KHRNLGDVDDYYHEEKRNSVLIEKEKVPKE----KKQFKSRMIVHP 1263

Query: 1275 RFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDI 1334
            RFQNITA++A   LSDK+ GESIVRPSSRG + LTL +KI + VYA+K+I+EG KE+KDI
Sbjct: 1264 RFQNITAEQATVYLSDKNIGESIVRPSSRGLNHLTLMIKISDNVYANKEIIEGEKENKDI 1321

Query: 1335 TSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEK 1394
             SL RIGKTLKIG +TFEDLDEVMDRYVDPLV HL TML++RKFR GTK+E+D+L+++EK
Sbjct: 1324 VSLQRIGKTLKIGNETFEDLDEVMDRYVDPLVTHLMTMLNHRKFRTGTKSEIDDLLRVEK 1321

Query: 1395 SEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYF 1454
               P  +VY FG+SHEHPG+FIL+YIRS NPHHEYIGLYPKGFKFRKRMF D+D+L AYF
Sbjct: 1384 GVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIGLYPKGFKFRKRMFGDLDKLAAYF 1321

Query: 1455 QRHIDD 1457
            +RHID+
Sbjct: 1444 KRHIDN 1321

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy Swiss-Prot
Match: Q8UVK2 (Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 3.1e-144
Identity = 455/1651 (27.56%), Postives = 757/1651 (45.85%), Query Frame = 0


Query: 8    DEEDEVELDDREPLDGDDVDGRNMEDEEDEEDE--EGQDEYEKDGFIVDDIEEEDEDVEE 67
            + E+E E  D +P        R ME++E+EE+E  E QDE+     ++DD + E+E+ EE
Sbjct: 11   ESEEEFEEKDLKPKKTQ----RFMEEDEEEEEENTEDQDEHGNLRGLIDDDDVEEEEEEE 70

Query: 68   R------EDSDDERQKKKKRKKN-------------IQRPKGSKKFKRLKK-ARRDNVEP 127
            R      EDSD   + + +R+K              I+   G K  +R KK +R   ++ 
Sbjct: 71   RGEPPAGEDSDSGEEVRHRRRKRSFDDYLDDDDLDLIEENLGVKVKRRKKKYSRVKTMDD 130

Query: 128  SGFSDDEDFVESSRGGRTAEEKLKRSLF---GDDEGMLLISFYYCLISTVSTLAPLEDIA 187
             G  DDE            ++ +   +F   GD EG +           V TL P +D  
Sbjct: 131  EGDDDDE------------KDLIADEIFTGDGDGEGEVEDG------EAVDTLHPRDD-- 190

Query: 188  EEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLYIF 247
             EEE+ +EE D D        DFI    VD+DG P                         
Sbjct: 191  -EEEEDDEESDID--------DFI----VDDDGQP------------------------- 250

Query: 248  NLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKR 307
                         + KKK ++  G +  ALQEA EIFG   +  +      D  E  E+ 
Sbjct: 251  -------------ITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEED 310

Query: 308  LEDE---------------------FEPIVISEKYMTEKDDQIREIDMPERMQISEESTG 367
             +DE                     +EP  +   +MT++D++IR  DMPER Q+   +  
Sbjct: 311  QDDESWDRPKKQTKRRVSRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQL--RAIP 370

Query: 368  PPPTMDERLEDEEASWIH---------------GHIANGMNSLFGNASGQDLSVTKGDIL 427
              P  D+ LE EEA WI+                ++  G  + F       ++  K    
Sbjct: 371  VKPAEDDELE-EEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIK---- 430

Query: 428  RFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPSLKWHKILWAIQDL 487
              L+ +  Q  ++PFIA YRKE +                     P L  +  LW +   
Sbjct: 431  EALNFMRNQHFEVPFIAFYRKEYV--------------------EPELNIND-LWKVWQW 490

Query: 488  DKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSV-------MKSLKAAE 547
            D+KW  L+ RK  L   +++    +    +++     +K L DS        M+ LK  +
Sbjct: 491  DEKWTQLKTRKQNLTRLFQRMQSYQ----FEQISADPDKPLADSTRPLDTADMERLKDVQ 550

Query: 548  SEREVDDVDSKFNLHFPPG-------------------EVGVDEGQ-------------- 607
            S  E+ DV + F L++                      EV  ++G+              
Sbjct: 551  SIDELGDVYNHFLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEEEQK 610

Query: 608  ---FKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMA 667
                K+  R+ +YSIC  AGL  +A KFG + EQFG  L     R++  + P E P E+A
Sbjct: 611  GPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELA 670

Query: 668  SNFTCAMFETPQAVLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDS 727
             ++ C+ F TP+AVL+GAR+M A++I+ EP VR  +R  + + A I+  PT  G   +D 
Sbjct: 671  KDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDVDE 730

Query: 728  FHQFSAVKWLREKPLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHL-----NKLINDFNE 787
             H   + K+L+ KP+      Q+L +  AEEE LL + + +    +         ++  +
Sbjct: 731  AHFAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEIKQ 790

Query: 788  YYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWN 847
            +Y  D  S   Q WN+QR L ++ +L  FL P M KE +  + ++AK+ ++    K L+N
Sbjct: 791  FYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKLYN 850

Query: 848  KVSVGPY----QHKENDISSDEEAAP--RVMACCWGPGKPATTFV-MLDSAGEVLDVLYT 907
             + V PY    Q +E+D   DE      RV+   +  G+    F  +++  GEV+D L  
Sbjct: 851  WLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRL 910

Query: 908  GSLTIR--SQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKM 967
                 R  +   +++++K+ D E + KF+   +PHVV +   N     + +DI   I ++
Sbjct: 911  PYFLKRRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTISEL 970

Query: 968  VEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLA 1027
             + +   V     G+ +V  D  L  LY NS+ S    +    ++++AV++ R +Q+PL 
Sbjct: 971  EQNSSLPV----VGVELV--DNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLV 1030

Query: 1028 MVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSP 1087
              A +C    +IL  KLHPL+  +  ++    +    +N  N+VG+D N AI+H +  S 
Sbjct: 1031 EFAQVCSTDDDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSL 1090

Query: 1088 LQFIAGLGPRKAASLQRSLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAAS 1147
            +Q+I GLGPRK + L + L +  + +  R   VT   +G KVF+N  GF+++  + L  S
Sbjct: 1091 VQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDS 1150

Query: 1148 SSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTL 1207
            +  +I++LD +R+HPE+Y  A+++A D  + D   ++ +D +   A+E + + P  L+ L
Sbjct: 1151 TDSYIEVLDGSRVHPETYEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDL 1210

Query: 1208 DVDEYSKSKNRE---DKRDTFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLA 1267
            D+D +++   R+   +K  T  DI+ EL   ++D R  Y  P+ +E F M++ ET +T  
Sbjct: 1211 DLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFY 1270

Query: 1268 EGKIVQATV-----RKVQGQRAICGLESGLTGMLMKEDYEDDS----------------- 1327
             GK++   V     R+ QG+     + +  TG+      + D+                 
Sbjct: 1271 IGKLITCVVTNIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCP 1330

Query: 1328 -------------------------RDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCK 1387
                                     + +    +R+  G  V C+I  I   ++ V L C+
Sbjct: 1331 GQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCR 1390

Query: 1388 ESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITAD 1447
             S++    ++     D YY  D  +   +Q++ +K+K+      K R+I HP F NI   
Sbjct: 1391 TSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEEQKKKQQRTTYIK-RVIAHPSFHNINFK 1450

Query: 1448 EAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGK 1487
            +A +++   D G+ ++RPSS+G + LT+T K+ +G+Y H D+ E GKE     +   +G 
Sbjct: 1451 QAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKE-----NAFSLGH 1510

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy Swiss-Prot
Match: Q7KZ85 (Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2)

HSP 1 Score: 511.1 bits (1315), Expect = 4.5e-143
Identity = 484/1721 (28.12%), Postives = 788/1721 (45.79%), Query Frame = 0


Query: 10   EDEVELDDREPLDGDDVDGR------NMEDEEDEEDEEGQDEYEKD----GFIVDDIEEE 69
            E E E  + E  D  +V  R        ED+++EE+EE  D+ ++     GFI DD +E+
Sbjct: 6    ESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFINDDDDED 65

Query: 70   DEDVEEREDS----DDERQKKKKR---------------KKNI-QRPKGSKKFKRLKKAR 129
            + + +E  DS    DD   KK+KR               ++N+  + K  +K++R+KK  
Sbjct: 66   EGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRRVKK-- 125

Query: 130  RDNVEPSGFSDDEDFVESSRGGRTAE-EKLKRSLFGDDEGMLLISFYYCLISTVSTLAPL 189
                     SDDED  E   G    E E +   +F D EG              +  AP+
Sbjct: 126  --------MSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGE---------EGQEAMEAPM 185

Query: 190  EDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITIL 249
                EEEE+ +EE D D        DFI    VD+DG PL+                   
Sbjct: 186  AP-PEEEEEDDEESDID--------DFI----VDDDGQPLK------------------- 245

Query: 250  LYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFG---DVDELLQLRK--REL 309
                              K K  ++ PG +  ALQEA EIFG   D DE  +  +   EL
Sbjct: 246  ------------------KPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEL 305

Query: 310  -DTHEWREKRLEDE---------------------FEPIVISEKYMTEKDDQIREIDMPE 369
             + +E+ +   E E                     +EP  +   ++T++D++IR  D+PE
Sbjct: 306  EEEYEYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPE 365

Query: 370  RMQISEESTGPPPTMDERLEDEEASWIHGH-IANGMNSLFGNAS----GQDLS------- 429
            R Q+   S       D+ LE EEA WI+ +  A    SL  +      GQ  S       
Sbjct: 366  RFQL--RSIPVKGAEDDELE-EEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGP 425

Query: 430  VTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPSLKWHKI 489
             T   I   L  +  Q  ++PFIA YRKE +     + E    D                
Sbjct: 426  STIQKIKEALGFMRNQHFEVPFIAFYRKEYV-----EPELHIND---------------- 485

Query: 490  LWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSV-------M 549
            LW +   D+KW  L+ RK  L   ++K    +    Y++     +K L D +       M
Sbjct: 486  LWRVWQWDEKWTQLRIRKENLTRLFEKMQAYQ----YEQISADPDKPLADGIRALDTTDM 545

Query: 550  KSLKAAESEREVDDVDSKFNLHFPPG-------------------EVGVDEG-------- 609
            + LK  +S  E+ DV + F L++                      E G +EG        
Sbjct: 546  ERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDE 605

Query: 610  -----QFKRPKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPE 669
                 + K+  R+ +Y+IC  AGL  +A KFG + EQFG  L     R++  + P E P 
Sbjct: 606  EQRGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PL 665

Query: 670  EMASNFTCAMFETPQAVLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVT 729
            E+A ++ C+ F TP+AVL+GAR+M A++I+ EP VR+ +R  + + A ++ +PT  G   
Sbjct: 666  ELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKD 725

Query: 730  IDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLIND----- 789
            +D  H   + K+L+ KP+    D Q+L I  AE+E LLT  + +  K +    ND     
Sbjct: 726  VDEAHYAYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFE 785

Query: 790  -FNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGK 849
               ++Y  D  S   Q WN QR + ++ AL  FL   M KE +  + ++AK +++    +
Sbjct: 786  EIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSR 845

Query: 850  NLWNKVSVGPY----QHKENDISSDEEAAP--RVMACCWGPGKPATTF-VMLDSAGEVLD 909
             L+N + V PY    Q +E+D   DE      RV+   +   +    F  +++  GEV D
Sbjct: 846  KLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTD 905

Query: 910  VLYTGSLTIRSQNVNDQQRKK--NDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEI 969
             L     T R     +++R+K   D E + KF+ + +PHVV +   N     L +D+  I
Sbjct: 906  FLRLPHFTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRI 965

Query: 970  IFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQ 1029
            + ++      D G ++  + +   D  L  LY NS+ S  + +    ++++AV+L R +Q
Sbjct: 966  VHEL------DQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQ 1025

Query: 1030 NPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQVGLDTNLAISHEW 1089
            +PL   A +C    +IL  K HPL+  +  ++    +    +N  N+VG+D N AI+H +
Sbjct: 1026 DPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPY 1085

Query: 1090 LFSPLQFIAGLGPRKAASLQRSLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSG 1149
              + +Q++ GLGPRK   L + L +  + + +R   VT   +G KVF+N  GFL++  + 
Sbjct: 1086 SQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTAS 1145

Query: 1150 LAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHL 1209
            L  S+  +I++LD +R+HPE+Y  A+++A D  + D   ++ +D +   A+E + + P  
Sbjct: 1146 LGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYD---ESAEDANPAGALEEILENPER 1205

Query: 1210 LRTLDVDEYSKSKNRE---DKRDTFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETE 1269
            L+ LD+D +++   R+   DK  T  DI+ EL   ++D R  Y  P+ +E F M++ ET 
Sbjct: 1206 LKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETP 1265

Query: 1270 DTLAEGKIVQATV-----RKVQGQ------------------------------------ 1329
            +T   GK++   V     R+ QG+                                    
Sbjct: 1266 ETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDS 1325

Query: 1330 -----RAI---CGLESGLTGMLMKEDYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQ 1389
                 +AI     L++G+TG +  +   D  + +    +R+  G  V C+I  I   ++ 
Sbjct: 1326 GSCPGQAIGVKTRLDNGVTGFIPTKFLSD--KVVKRPEERVKVGMTVHCRIMKIDIEKFS 1385

Query: 1390 VFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRF 1449
              L C+ S++    ++     D YY  D  +   +Q++  K K+      K R+I HP F
Sbjct: 1386 ADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSF 1445

Query: 1450 QNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITS 1509
             NI   +A +++   D G+ I+RPSS+G + LT+T K+ +G+Y H D+ E GKE     +
Sbjct: 1446 HNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKE-----N 1505

Query: 1510 LLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYRKFRK---GTKAEVDELMKIE 1551
               +G TL I  + FEDLDE++ RYV P+ +  + +L+++ ++    G + +++EL+   
Sbjct: 1506 AFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKT 1565

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy Swiss-Prot
Match: Q62383 (Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2)

HSP 1 Score: 510.8 bits (1314), Expect = 5.9e-143
Identity = 471/1692 (27.84%), Postives = 775/1692 (45.80%), Query Frame = 0


Query: 32   EDEEDEEDEEGQDEYEKDG----FIVDDIEEEDEDVEEREDS----DDERQKKKKR---- 91
            ED+++EE+EE  D+ ++ G    FI DD +EE+ + +E  DS    DD   KK+KR    
Sbjct: 34   EDDDEEEEEENLDDQDERGNLKDFINDDDDEEEGEEDEGSDSGDSEDDVGHKKRKRPSFD 93

Query: 92   -----------KKNI-QRPKGSKKFKRLKKARRDNVEPSGFSDDEDFVESSRGGRTAEEK 151
                       ++N+  + K  +K++R+KK            DDED  E        +E 
Sbjct: 94   DRLEDDDFDLIEENLGVKVKRGQKYRRVKKMS---------DDDEDDEEEYGKEEHEKEA 153

Query: 152  LKRSLFGDDEGMLLISFYYCLISTVSTLAPLEDIAEEEEQPEEEEDADIGDEDEMADFIV 211
            +   +F D+EG                    E +      P+EEE+ D  +E ++ DFI 
Sbjct: 154  IAGEIFQDEEGE----------------EGQEAVEAPMAPPDEEEEDD--EESDIDDFI- 213

Query: 212  DEEVDEDGAPLRDLSPHLLVFLLILLPITILLYIFNLNLLIVRSRRRKLKKKKSRQAPGV 271
               VD+DG PL+                                     K K  ++ PG 
Sbjct: 214  ---VDDDGQPLK-------------------------------------KPKWRKKLPGY 273

Query: 272  SSTALQEAHEIFG---DVDELLQLRK--REL-DTHEWREKRLEDE--------------- 331
            +  ALQEA EIFG   D DE  +  +   EL + +E+ +   E E               
Sbjct: 274  TDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDYEYEDDETEGEIRVRPKKTTKKRVSR 333

Query: 332  ------FEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHG 391
                  +EP  +   ++T++D++IR  D+PER Q+   S       D+ LE EEA WI+ 
Sbjct: 334  RSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL--RSIPVKAAEDDELE-EEADWIYR 393

Query: 392  H-IANGMNSLFGNAS----GQDLS-------VTKGDILRFLDLVHVQKLDIPFIAMYRKE 451
            +  A    SL  +      GQ  S        T   I   L  +  Q  ++PFIA YRKE
Sbjct: 394  NAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQHFEVPFIAFYRKE 453

Query: 452  EILSLLKDTEHESGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRN 511
             +     + E    D                LW +   D+KW  L+ RK  L   ++K  
Sbjct: 454  YV-----EPELHIND----------------LWRVWQWDEKWTQLRIRKENLTRLFEKMQ 513

Query: 512  DEEACRIYDETRLSLNKQLFDSV-------MKSLKAAESEREVDDVDSKFNLHF------ 571
              +    Y++     +K L D +       M+ LK  +S  E+ DV + F L++      
Sbjct: 514  AYQ----YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPK 573

Query: 572  ----------------------PPGEVGVDEGQ----FKRPKRKSLYSICSKAGLWEVAG 631
                                    GE   DE Q     K+  R+ +Y+IC  AGL  +A 
Sbjct: 574  MQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAK 633

Query: 632  KFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEI 691
            KFG + EQFG  L     R++  + P E P E+A ++ C+ F TP+AVL+GAR+M A++I
Sbjct: 634  KFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFPTPEAVLEGARYMVALQI 693

Query: 692  SCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLI 751
            + EP VR+ +R  + + A ++ +PT  G   +D  H   + K+L+ KP+    D Q+L I
Sbjct: 694  AREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKI 753

Query: 752  QKAEEEKLLTVTLKLPEKHLNKLIND------FNEYYLSDGVSKSAQLWNEQRKLILQDA 811
              AE+E LLT+ + +  K +    ND        ++Y  D  S   Q WN QR + ++ A
Sbjct: 754  GLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERA 813

Query: 812  LSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPY----QHKENDISSDEEAA 871
            L  FL   M KE +  + ++A+  ++    + L+N + V PY    Q +E+D   DE   
Sbjct: 814  LQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQG 873

Query: 872  P--RVMACCWGPGKPATTF-VMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKK--NDQERV 931
               RV+   +   +    F  +++  GEV D L     T R     +++R+K   D E +
Sbjct: 874  KGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETL 933

Query: 932  LKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLP 991
             KF+ + +PHVV +   N     L +D+  I+ ++      D G ++  + +   D  L 
Sbjct: 934  KKFLVNKKPHVVTIAGENRDAQMLTEDVKRIVHEL------DQGQQLSSIGVELVDNELA 993

Query: 992  RLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLT 1051
             LY NS+ S  + +    ++++AV+L R +Q+PL   A +C    +IL  K HPL+  + 
Sbjct: 994  ILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVV 1053

Query: 1052 PDDKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGS- 1111
             ++    +    +N  N+VG+D N AI+H +  + +Q++ GLGPRK   L + L +  + 
Sbjct: 1054 KEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTR 1113

Query: 1112 IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELA 1171
            + +R   VT   +G KVF+N  GFL++  + L  S+  +I++LD +R+HPE+Y  A+++A
Sbjct: 1114 LESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMA 1173

Query: 1172 KDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNRE---DKRDTFLDIK 1231
             D  + D   ++ +D +   A+E + + P  L+ LD+D +++   R+   DK  T  DI+
Sbjct: 1174 VDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIR 1233

Query: 1232 RELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATV-----RKVQGQ----- 1291
             EL   ++D R  Y  P+ +E F M++ ET +T   GK++   V     R+ QG+     
Sbjct: 1234 AELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQA 1293

Query: 1292 ------------------------------------RAI---CGLESGLTGMLMKEDYED 1351
                                                +AI     L++G+TG +  +   D
Sbjct: 1294 IRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSD 1353

Query: 1352 DSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDR 1411
              + +    +R+  G  V C+I  I   ++   L C+ S++    ++     D YY  D 
Sbjct: 1354 --KVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDA 1413

Query: 1412 SSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGP 1471
             +   +Q++  K K+      K R+I HP F NI   +A +++   D G+ I+RPSS+G 
Sbjct: 1414 EAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGE 1473

Query: 1472 SFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPL 1531
            + LT+T K+  G+Y H D+ E GKE     +   +G TL I  + FEDLDE++ RYV P+
Sbjct: 1474 NHLTVTWKVSAGIYQHVDVREEGKE-----NAFSLGATLWINSEEFEDLDEIVARYVQPM 1533

Query: 1532 VAHLKTMLSYRKFRK---GTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRS 1551
             +  + +L+++ ++    G + +++EL+   K E P  I Y      E PG F+L Y   
Sbjct: 1534 ASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPR 1593

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy TrEMBL
Match: A0A6J1FBX2 (Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC111444018 PE=3 SV=1)

HSP 1 Score: 3045.8 bits (7895), Expect = 0.0e+00
Identity = 1598/1669 (95.75%), Postives = 1599/1669 (95.81%), Query Frame = 0


Query: 1    MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED 60
            MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED
Sbjct: 1    MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED 60

Query: 61   EDVEEREDSDDERQKKKKRKK-------------------NIQRPKGSKKFKRLKKARRD 120
            EDVEEREDSDDERQKKKKRKK                   +IQRPKGSKKFKRLKKARRD
Sbjct: 61   EDVEEREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRD 120

Query: 121  NVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAPLEDI 180
            NVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDE                  APLEDI
Sbjct: 121  NVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDE------------------APLEDI 180

Query: 181  AEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLYI 240
            AEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPL                       
Sbjct: 181  AEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPL----------------------- 240

Query: 241  FNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREK 300
                      RRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREK
Sbjct: 241  ----------RRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREK 300

Query: 301  RLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGH 360
            RLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGH
Sbjct: 301  RLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGH 360

Query: 361  IANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHES 420
            IANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHES
Sbjct: 361  IANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHES 420

Query: 421  GDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRL 480
            GDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRL
Sbjct: 421  GDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRL 480

Query: 481  SLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSK 540
            SLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSK
Sbjct: 481  SLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSK 540

Query: 541  AGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGA 600
            AGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGA
Sbjct: 541  AGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGA 600

Query: 601  RHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRF 660
            RHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRF
Sbjct: 601  RHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRF 660

Query: 661  EDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQ 720
            EDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQ
Sbjct: 661  EDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQ 720

Query: 721  DALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPR 780
            DALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPR
Sbjct: 721  DALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPR 780

Query: 781  VMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDH 840
            VMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDH
Sbjct: 781  VMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDH 840

Query: 841  QPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSR 900
            QPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSR
Sbjct: 841  QPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSR 900

Query: 901  ISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGM 960
            ISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGM
Sbjct: 901  ISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGM 960

Query: 961  VEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFV 1020
            VEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFV
Sbjct: 961  VEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFV 1020

Query: 1021 TAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDV 1080
            TAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDV
Sbjct: 1021 TAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDV 1080

Query: 1081 KGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWR 1140
            KGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWR
Sbjct: 1081 KGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWR 1140

Query: 1141 KQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYED 1200
            KQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYED
Sbjct: 1141 KQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYED 1200

Query: 1201 DSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDR 1260
            DSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDR
Sbjct: 1201 DSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDR 1260

Query: 1261 SSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGP 1320
            SSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGP
Sbjct: 1261 SSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGP 1320

Query: 1321 SFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPL 1380
            SFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPL
Sbjct: 1321 SFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPL 1380

Query: 1381 VAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNP 1440
            VAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNP
Sbjct: 1381 VAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNP 1440

Query: 1441 HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGG 1500
            HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGG
Sbjct: 1441 HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGG 1500

Query: 1501 SSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYGG 1560
            SSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYGG
Sbjct: 1501 SSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYGG 1560

Query: 1561 RGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWS 1620
            RGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWS
Sbjct: 1561 RGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWS 1618

Query: 1621 SGGSGGGGGNGLSDSGGGGGGWGGTGNSKGNWGGGGGGSGPSNSGGWGS 1651
            SGGSGGGGGNGLSDSGGGGGGWGGTGNSKGNWGGGGGGSGPSNSGGWGS
Sbjct: 1621 SGGSGGGGGNGLSDSGGGGGGWGGTGNSKGNWGGGGGGSGPSNSGGWGS 1618

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy TrEMBL
Match: A0A6J1HNV8 (Transcription elongation factor spt6 OS=Cucurbita maxima OX=3661 GN=LOC111465338 PE=3 SV=1)

HSP 1 Score: 3004.2 bits (7787), Expect = 0.0e+00
Identity = 1586/1670 (94.97%), Postives = 1591/1670 (95.27%), Query Frame = 0


Query: 1    MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED 60
            MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED
Sbjct: 1    MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED 60

Query: 61   -EDVEEREDSDDERQKKKKRKK-------------------NIQRPKGSKKFKRLKKARR 120
             EDVE+REDSDDERQKKKKRKK                   +IQRPKGSKKFKRLKKARR
Sbjct: 61   EEDVEQREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARR 120

Query: 121  DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAPLED 180
            DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDE                  APLED
Sbjct: 121  DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDE------------------APLED 180

Query: 181  IAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLY 240
            IAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPL                      
Sbjct: 181  IAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPL---------------------- 240

Query: 241  IFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWRE 300
                       RRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWRE
Sbjct: 241  -----------RRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWRE 300

Query: 301  KRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHG 360
            KRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHG
Sbjct: 301  KRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHG 360

Query: 361  HIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 420
            HIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE
Sbjct: 361  HIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 420

Query: 421  SGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETR 480
            SGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETR
Sbjct: 421  SGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETR 480

Query: 481  LSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 540
            LSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS
Sbjct: 481  LSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 540

Query: 541  KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG 600
            KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG
Sbjct: 541  KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG 600

Query: 601  ARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSR 660
            ARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSR
Sbjct: 601  ARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSR 660

Query: 661  FEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLIL 720
            FEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLIL
Sbjct: 661  FEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLIL 720

Query: 721  QDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAP 780
            QDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAP
Sbjct: 721  QDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAP 780

Query: 781  RVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTD 840
            RVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTD
Sbjct: 781  RVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTD 840

Query: 841  HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 900
            HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS
Sbjct: 841  HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 900

Query: 901  RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYG 960
            RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYG
Sbjct: 901  RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYG 960

Query: 961  MVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 1020
            M+EQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF
Sbjct: 961  MIEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 1020

Query: 1021 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDED 1080
            VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDED
Sbjct: 1021 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDED 1080

Query: 1081 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDW 1140
            VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDW
Sbjct: 1081 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDW 1140

Query: 1141 RKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYE 1200
            RKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDY 
Sbjct: 1141 RKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYA 1200

Query: 1201 DDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHED 1260
            DDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHED
Sbjct: 1201 DDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHED 1260

Query: 1261 RSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG 1320
            RSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG
Sbjct: 1261 RSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG 1320

Query: 1321 PSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1380
            PSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP
Sbjct: 1321 PSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1380

Query: 1381 LVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1440
            LVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN
Sbjct: 1381 LVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1440

Query: 1441 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATG 1500
            PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATG
Sbjct: 1441 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATG 1500

Query: 1501 GSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYG 1560
            GSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGR+DNRNSGSRDGHPSGLPRPYG
Sbjct: 1501 GSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRNDNRNSGSRDGHPSGLPRPYG 1560

Query: 1561 GRGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGW 1620
              GRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGW
Sbjct: 1561 --GRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGW 1614

Query: 1621 SSGGSGGGGGNGLSDSGGGGGGWGGTGNSKGNWGGGGGGSGPSNSGGWGS 1651
            SSGGSGGGGGNGLSDSGGGG G G +GNSKGNW  GGGGSGPSNSGGWGS
Sbjct: 1621 SSGGSGGGGGNGLSDSGGGGWG-GNSGNSKGNW--GGGGSGPSNSGGWGS 1614

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy TrEMBL
Match: A0A6J1D721 (Transcription elongation factor spt6 OS=Momordica charantia OX=3673 GN=LOC111018212 PE=3 SV=1)

HSP 1 Score: 2835.4 bits (7349), Expect = 0.0e+00
Identity = 1498/1679 (89.22%), Postives = 1552/1679 (92.44%), Query Frame = 0


Query: 1    MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED 60
            MGKAVISDEEDEVELDDREPLDG+DVD  NMED+EDE+DEEGQDEYEKDGFIVDDI+EED
Sbjct: 1    MGKAVISDEEDEVELDDREPLDGEDVDRHNMEDDEDEDDEEGQDEYEKDGFIVDDIDEED 60

Query: 61   -EDVEEREDSDDERQKKKKRKK-------------------NIQRPKGSKKFKRLKKARR 120
             EDVEEREDSD+ERQKKKKRKK                    IQRPKGSKKFKRLKKA+R
Sbjct: 61   EEDVEEREDSDEERQKKKKRKKKEEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQR 120

Query: 121  DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAPLED 180
            DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDE                  APLED
Sbjct: 121  DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDE------------------APLED 180

Query: 181  IAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLY 240
            IAEEEEQPEEEED DIGDEDEMADFIVDEEVDEDGAP+                      
Sbjct: 181  IAEEEEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPV---------------------- 240

Query: 241  IFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWRE 300
                       RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+HEW E
Sbjct: 241  -----------RRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWHE 300

Query: 301  KRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHG 360
            KRLEDEFEPIVISEKYMTEKDDQIREID+PERMQISEESTGPPP MDE   ++E SWIHG
Sbjct: 301  KRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPP-MDEISLEDETSWIHG 360

Query: 361  HIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 420
            H+ANG NSLFG ASGQDLSV K DILRFLDLVH+QKLDIPFI MYRKEEILSLLKDT+HE
Sbjct: 361  HLANGTNSLFGTASGQDLSVVKDDILRFLDLVHIQKLDIPFITMYRKEEILSLLKDTQHE 420

Query: 421  SGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETR 480
            + DDQ +NEK P+LKWHKILWAIQ+LDKKWLLLQKRKNAL+SYY KR +EE+ RIYDETR
Sbjct: 421  AVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETR 480

Query: 481  LSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 540
            LSLN QLF+SVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS
Sbjct: 481  LSLNNQLFESVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 540

Query: 541  KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG 600
            KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG
Sbjct: 541  KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG 600

Query: 601  ARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSR 660
            ARHMAAIEISCEPCVRKHVRSY+MDYAVISTSPT DGNV IDSFHQFS VKWLREKPLSR
Sbjct: 601  ARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR 660

Query: 661  FEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLIL 720
            FEDAQWLLIQKAEEEKLL VTLKLPEKHLNKLI DFNEYYLSDGVSKSAQLWNEQRKLIL
Sbjct: 661  FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLIL 720

Query: 721  QDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAP 780
            QDALSGFLLPSMEKEAR+LM S+AKNWLLMEYGK+LWNK+SVGPYQHKENDISSDEEAAP
Sbjct: 721  QDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAP 780

Query: 781  RVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTD 840
            RVMACCWGPGKPATTFVMLDS+GEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKFMTD
Sbjct: 781  RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD 840

Query: 841  HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 900
            HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS
Sbjct: 841  HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 900

Query: 901  RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYG 960
            RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPG+EILSWKL+PLENF+TPD+KYG
Sbjct: 901  RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYG 960

Query: 961  MVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 1020
            MVEQVMV+VTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF
Sbjct: 961  MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 1020

Query: 1021 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDED 1080
            VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVFDED
Sbjct: 1021 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED 1080

Query: 1081 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDW 1140
            VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEY+ SK REDKR+TFLDIKRELM GFQDW
Sbjct: 1081 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDW 1140

Query: 1141 RKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYE 1200
            RKQYEEPSQDEEFYMISGETEDTLAEG+IVQATVRKVQGQRAICGLESGLTGMLMKED+ 
Sbjct: 1141 RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFA 1200

Query: 1201 DDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHED 1260
            DDSR+ISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+Q+TR+LDPYYHED
Sbjct: 1201 DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHED 1260

Query: 1261 RSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG 1320
            RSSLQSEQ+KSRKEKELAKK FKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRG
Sbjct: 1261 RSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRG 1320

Query: 1321 PSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1380
            PSFLTLTLKIY+GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP
Sbjct: 1321 PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1380

Query: 1381 LVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1440
            LV+HLK MLSYRKFR+GTKAEVDELM+IEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN
Sbjct: 1381 LVSHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1440

Query: 1441 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATG 1500
            PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATG
Sbjct: 1441 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATG 1500

Query: 1501 GSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYG 1560
            GSSAASAGSPWGGSSHDGGWRSQS DRDRSSTPGSRTGR+DNRNSG RDGHPSGLPRPYG
Sbjct: 1501 GSSAASAGSPWGGSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYG 1560

Query: 1561 GRGRGRGSYNNNRG---NNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1620
            GRGRGRGSYNNNRG   NNER DSSYD SRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFP
Sbjct: 1561 GRGRGRGSYNNNRGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFP 1620

Query: 1621 GGWSSGGSGGGGGNGLSDS-----GGGGGGWGGT-GNSKGNWGGGGGGSGPSNSGGWGS 1651
            GGW SGGS GGGGNG SDS     GGGGGGWGG+ GNSKGNW    GGSG SNSGGWGS
Sbjct: 1621 GGWGSGGS-GGGGNGWSDSGGDGGGGGGGGWGGSGGNSKGNW----GGSGASNSGGWGS 1622

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy TrEMBL
Match: A0A6J1EUY6 (Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC111436171 PE=3 SV=1)

HSP 1 Score: 2819.6 bits (7308), Expect = 0.0e+00
Identity = 1490/1675 (88.96%), Postives = 1539/1675 (91.88%), Query Frame = 0


Query: 1    MGKAVISDEEDEVELDDREPLDGDDVDGRNM---EDEEDEEDEEGQDEYEKDGFIVDDIE 60
            MGKAVISD+EDEVEL+DREPLDGDDVDG NM   +DE+DEEDEE QDEYEKDGFIVDDIE
Sbjct: 1    MGKAVISDDEDEVELEDREPLDGDDVDGHNMRDEDDEDDEEDEEEQDEYEKDGFIVDDIE 60

Query: 61   EED-EDVEEREDSDDERQKKKKRKK-------------------NIQRPKGSKKFKRLKK 120
            EED EDVEEREDSDDE+Q+KKKRKK                   +IQRPKGSKKFKRLKK
Sbjct: 61   EEDEEDVEEREDSDDEKQRKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKK 120

Query: 121  ARRDNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAP 180
            ARRDNVEPSGFSDDEDF+ESSRGGRTAEEKLKRSLFGDDE                  AP
Sbjct: 121  ARRDNVEPSGFSDDEDFIESSRGGRTAEEKLKRSLFGDDE------------------AP 180

Query: 181  LEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITI 240
            LEDIAEE EQPEEEED DIGDEDEMADFIVDEEVDEDGAPL                   
Sbjct: 181  LEDIAEELEQPEEEEDVDIGDEDEMADFIVDEEVDEDGAPL------------------- 240

Query: 241  LLYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHE 300
                          RRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHE
Sbjct: 241  --------------RRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHE 300

Query: 301  WREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASW 360
            WRE RLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTG PP MDE   D+EASW
Sbjct: 301  WRENRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGSPP-MDEMSLDDEASW 360

Query: 361  IHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDT 420
            IHGHIANGMNSLFGNASGQDLSVTK DIL+FLDLVHVQKLDIPFIAMYRKEEILSLLKDT
Sbjct: 361  IHGHIANGMNSLFGNASGQDLSVTKDDILQFLDLVHVQKLDIPFIAMYRKEEILSLLKDT 420

Query: 421  EHESGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYD 480
            EH++G+DQD+N+KTP+LKWHK+LWAIQDLDKKWLLLQKRK AL  YY+KR +EE  R  D
Sbjct: 421  EHDAGNDQDKNDKTPTLKWHKVLWAIQDLDKKWLLLQKRKKALHLYYRKRFEEELRRDDD 480

Query: 481  ETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 540
             TR SLN QLF+SV KSL+AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 481  VTRQSLNSQLFESVKKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 540

Query: 541  ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAV 600
            ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAV
Sbjct: 541  ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 600

Query: 601  LKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKP 660
            LKGARHMAAIEISCEPCVRKHVRSY+MDYAVIST+PTSDGN  IDSFHQFS VKWLREKP
Sbjct: 601  LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTNPTSDGNAAIDSFHQFSVVKWLREKP 660

Query: 661  LSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRK 720
            LSRFEDAQWLLIQKAEEEKLL VTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 661  LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRK 720

Query: 721  LILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEE 780
            LILQDALSGFLLPSMEKEAR++MTSKAK WLL EYGKNLWNK+SVGPYQHKENDISSDEE
Sbjct: 721  LILQDALSGFLLPSMEKEARSVMTSKAKKWLLTEYGKNLWNKISVGPYQHKENDISSDEE 780

Query: 781  AAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKF 840
            AAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKF
Sbjct: 781  AAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 840

Query: 841  MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 900
            MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 841  MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 900

Query: 901  ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDD 960
            ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKL+P ENFLTPD+
Sbjct: 901  ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPFENFLTPDE 960

Query: 961  KYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 1020
            KYGMVEQVMV+VTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 961  KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 1020

Query: 1021 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVF 1080
            KDFVT HGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVF
Sbjct: 1021 KDFVTVHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1080

Query: 1081 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGF 1140
            DED+KGDANDDEDAEMAIEHVRDRPHLLRTLDVDEY+KSK  EDKR+TFLDIKREL+QGF
Sbjct: 1081 DEDIKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKWEDKRETFLDIKRELLQGF 1140

Query: 1141 QDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKE 1200
            QDWRKQYEEP+QDEEFYMISGETEDTLAEG+IVQATVRKV GQ+AICGLESGLTGMLMKE
Sbjct: 1141 QDWRKQYEEPNQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1200

Query: 1201 DYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYY 1260
            DY D SR+ISDLS+RLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQ+TRNLDPYY
Sbjct: 1201 DYADGSREISDLSERLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITRNLDPYY 1260

Query: 1261 HEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1320
            HEDRS LQSEQ+KS+KEKELAKK FKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1261 HEDRSRLQSEQEKSQKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1320

Query: 1321 SRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1380
            SRGPSFLTLTLKIY+GVYAHKDIVEGGKEHKDITSLLRIGKTLKIG+DTFEDLDEVMDRY
Sbjct: 1321 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGDDTFEDLDEVMDRY 1380

Query: 1381 VDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1440
            VDPLVAHLK MLSYRKFR+GTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR
Sbjct: 1381 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1440

Query: 1441 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1500
            STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1441 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1500

Query: 1501 ATGGSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPR 1560
            ATGGSSAASAGSPWGGSSHDG WRSQSYDRDRSSTPGSRTGR+DNRNS  RDGHPSGLPR
Sbjct: 1501 ATGGSSAASAGSPWGGSSHDGSWRSQSYDRDRSSTPGSRTGRNDNRNSSGRDGHPSGLPR 1560

Query: 1561 PYGGRGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1620
            PYGGRGRGRGSYNNNRGNNERPDSSYD SRWDSSSKDGDDGLSNFPGAK QNSPGKEAFP
Sbjct: 1561 PYGGRGRGRGSYNNNRGNNERPDSSYDGSRWDSSSKDGDDGLSNFPGAKTQNSPGKEAFP 1612

Query: 1621 GGWSSGG-SGGGGGNGLSDS-GGGGGGWGGTGNSKGNWGGGGGGSGPSNSGGWGS 1651
            GGWS+GG SGGGGGNG SDS GGGGGGWGGT           G S   NSGGWGS
Sbjct: 1621 GGWSAGGSSGGGGGNGWSDSKGGGGGGWGGT-----------GASSVGNSGGWGS 1612

[Close]

BLAST of CmoCh12G009740.1 vs. ExPASy TrEMBL
Match: A0A1S3B3S8 (Transcription elongation factor spt6 OS=Cucumis melo OX=3656 GN=LOC103485847 PE=3 SV=1)

HSP 1 Score: 2809.6 bits (7282), Expect = 0.0e+00
Identity = 1486/1664 (89.30%), Postives = 1535/1664 (92.25%), Query Frame = 0


Query: 16   DDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED-EDVEEREDSDDERQ 75
            DDREPLDGDDVDG NM DEEDEEDEEG+DEYEKDGFIVDD+EEED EDVEEREDSDDERQ
Sbjct: 8    DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEEREDSDDERQ 67

Query: 76   KKKKRKK-------------------NIQRPKGSKKFKRLKKARRDNVEPSGFSDDEDFV 135
            KKKKRKK                   +IQRPKGSKKFKRLKKARRDN+EPSGFSDDEDFV
Sbjct: 68   KKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFV 127

Query: 136  ESSRGGRTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAPLEDIAEEEEQPEEEEDAD 195
            ESSRGGRTAEEKLKRSLFGDDE                  APLEDIAEEEEQPEEEEDAD
Sbjct: 128  ESSRGGRTAEEKLKRSLFGDDE------------------APLEDIAEEEEQPEEEEDAD 187

Query: 196  IGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLYIFNLNLLIVRSRRRK 255
            IGDEDEMADFIVDEE DEDGAP+                                 RR+K
Sbjct: 188  IGDEDEMADFIVDEEEDEDGAPI---------------------------------RRKK 247

Query: 256  LKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVISEK 315
            LKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDT EWREKRLEDEFEPIVISEK
Sbjct: 248  LKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQEWREKRLEDEFEPIVISEK 307

Query: 316  YMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNASG 375
            YMTEKDDQIREID+PERMQISEESTG PPT D  L D+EASWIHGHIANGMNSLF NASG
Sbjct: 308  YMTEKDDQIREIDIPERMQISEESTGSPPTDDASL-DDEASWIHGHIANGMNSLFSNASG 367

Query: 376  QDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRNEKTPSLK 435
            QDLSVTK DILR+LDLVHVQKLDIPFIAMYRKEEILSLLKD EHE+GDDQD+N+K P+L+
Sbjct: 368  QDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDIEHEAGDDQDKNDKAPTLR 427

Query: 436  WHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSVMKSL 495
            WHK+LWAIQDLDKKWLLLQKRK AL+SYYK R  EE       TR +LN+QLFDSV +SL
Sbjct: 428  WHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTTLNRQLFDSVNRSL 487

Query: 496  KAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 555
            +AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS
Sbjct: 488  EAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 547

Query: 556  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPCV 615
            EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAVLKGARHMAAIEISCEPCV
Sbjct: 548  EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAIEISCEPCV 607

Query: 616  RKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAEEE 675
            RKHVRSY+MDYAVISTSPT DGNV IDSFHQFS VKWLREKPLSRFEDAQWLLIQKAEEE
Sbjct: 608  RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 667

Query: 676  KLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 735
            KLL VTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE
Sbjct: 668  KLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 727

Query: 736  ARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 795
            AR+LMTSKAK WLLMEYGKNLW+KVS+GPYQHKENDISSDEEAAPRVMACCWGPGKPATT
Sbjct: 728  ARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 787

Query: 796  FVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 855
            FVMLDS+GEVLDVLYTGSLT+RSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC
Sbjct: 788  FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 847

Query: 856  TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVK 915
            TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVK
Sbjct: 848  TRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIVK 907

Query: 916  RAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQVGL 975
            RAVALGRYLQNPLAMVATLCGPGREILSWKL+PLENFLTPD+KYGMVEQVMV+VTNQVGL
Sbjct: 908  RAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQVGL 967

Query: 976  DTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAV 1035
            DTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAV
Sbjct: 968  DTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNAV 1027

Query: 1036 GFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAI 1095
            GFLRVRRSGLAASSSQFIDLLD+TRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAI
Sbjct: 1028 GFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDEDVKGDANDDEDAEMAI 1087

Query: 1096 EHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEEFYM 1155
            EHVRDRPHLLRTLDVDEY+KSK REDK +TFLDIKRELMQGFQDWRKQYEEPSQDEEFYM
Sbjct: 1088 EHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGFQDWRKQYEEPSQDEEFYM 1147

Query: 1156 ISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYEDDSRDISDLSDRLHE 1215
            ISGETEDTLAEG+IVQATVRKV GQ+AICGLESGLTGMLMKEDY DDSR+ISDLSDRL E
Sbjct: 1148 ISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYADDSREISDLSDRLRE 1207

Query: 1216 GDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQSEQDKSRKEK 1275
            GDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQ+T+NLDPYYHEDRSSLQSEQ+KSRKEK
Sbjct: 1208 GDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRKEK 1267

Query: 1276 ELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYNGVY 1335
            ELAKK FKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIY+GVY
Sbjct: 1268 ELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDGVY 1327

Query: 1336 AHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSYRKFR 1395
            AHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLK MLSYRKFR
Sbjct: 1328 AHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFR 1387

Query: 1396 KGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKF 1455
            +GTKAEVDELM+IEKSEYPMRI+YGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKF
Sbjct: 1388 RGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKF 1447

Query: 1456 RKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSS 1515
            RKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSS
Sbjct: 1448 RKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSS 1507

Query: 1516 HDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGLPRPYGGRGRGRGSYNNNRGN 1575
            H+GGWRSQS+DRDRSSTPGSRTGR+DNRNSG RDGHPSGLPRPYGGRGRGRGSYNNNRGN
Sbjct: 1508 HEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYGGRGRGRGSYNNNRGN 1567

Query: 1576 NERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGS--GGGGGNGL 1635
            N+R DS YD SRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGS  GGGGGNG 
Sbjct: 1568 NDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGGGGNGW 1615

Query: 1636 SDS------GGGGGGWGGT-GNSKGNWGGGGGGSGPSNSGGWGS 1651
            +DS      G GGGGWGGT GNSKGNWGG GG    SNSGGWGS
Sbjct: 1628 NDSTGGSGGGSGGGGWGGTGGNSKGNWGGSGG----SNSGGWGS 1615

[Close]

BLAST of CmoCh12G009740.1 vs. TAIR 10
Match: AT1G65440.2 (global transcription factor group B1 )

HSP 1 Score: 1976.8 bits (5120), Expect = 0.0e+00
Identity = 1094/1636 (66.87%), Postives = 1270/1636 (77.63%), Query Frame = 0


Query: 1    MGKAVISDEEDEVEL--DDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIV--DDI 60
            M +  ISD+E++ EL  DD EP+ GD  +    +DEED++D    +EYE DGFIV  +D 
Sbjct: 1    MARNAISDDEEDHELEDDDGEPVHGDPAEHDENDDEEDDDDV--GNEYENDGFIVNDEDE 60

Query: 61   EEEDEDVEEREDSDDERQKKKKRKK-----------------NIQRPKGSKKFKRLKKAR 120
            EEE+E+ EER+DSD+ERQKKKK++K                 N++  K  +++KRLKKA+
Sbjct: 61   EEEEEEDEERKDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK--RQYKRLKKAQ 120

Query: 121  RDNVEPSGFSDDEDFVESSRGG--RTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAP 180
            R+     G S D++F   SRGG  R+AE+K+K  LF D                V    P
Sbjct: 121  REQGNGQGESSDDEF--DSRGGTRRSAEDKIKDRLFDD----------------VDVDDP 180

Query: 181  LEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITI 240
             +D+ +EE+   EE+   +G EDEMADFIVDE+ DE G P                    
Sbjct: 181  PDDVGDEEDLVVEED--VVGSEDEMADFIVDED-DEHGPP-------------------- 240

Query: 241  LLYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHE 300
                          +R   KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L +++
Sbjct: 241  --------------KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQ 300

Query: 301  WREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASW 360
              E+RLEDEFEP V+SEKYMT  DD+IR++D+PERMQISEESTG PP +DE   +EE++W
Sbjct: 301  RMERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPP-VDEISIEEESNW 360

Query: 361  IHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDT 420
            I+  +A+ +    G   G+  SV K DI +FL+L HVQKL+IPFIAMYRKE+  SLL   
Sbjct: 361  IYAQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL--- 420

Query: 421  EHESGDDQDRNE-KTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIY 480
              ++GD    N+ K P  KWHK+ W I DLDKKWLLL+KRK AL  YY KR +EE+ R+Y
Sbjct: 421  --DTGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVY 480

Query: 481  DETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLY 540
            DETRL+LN+ LF+SV+KSLK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS Y
Sbjct: 481  DETRLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQY 540

Query: 541  SICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQA 600
            SICSKAGLWEVA KFGYS+EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   A
Sbjct: 541  SICSKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLA 600

Query: 601  VLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREK 660
            VLKGARHMAA+EISCEP V+K+VR  YM+ AV+STSPT+DGN  IDSFHQFS +KWLREK
Sbjct: 601  VLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREK 660

Query: 661  PLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQR 720
            PLS+FE AQWLLIQK EEEKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQR
Sbjct: 661  PLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQR 720

Query: 721  KLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDE 780
            KLIL+DAL  FLLPSMEKEAR+L+TS+AK+ LL EYG+ LWNKVS GPYQ KE DI+ DE
Sbjct: 721  KLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDE 780

Query: 781  EAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLK 840
            EAAPRVMACCWGPGKP  TFVMLDS+GEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLK
Sbjct: 781  EAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLK 840

Query: 841  FMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRL 900
            FM DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRL
Sbjct: 841  FMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRL 900

Query: 901  YENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPD 960
            YENSRIS +QL  QSG V+RAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFL  D
Sbjct: 901  YENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLD 960

Query: 961  DKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFT 1020
            +KYGMVEQVMV++TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF 
Sbjct: 961  EKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFV 1020

Query: 1021 RKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDV 1080
            RKD +  HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLD+TRIHPESY+LAQELAKD+
Sbjct: 1021 RKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDI 1080

Query: 1081 FDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQ 1140
            +DEDV+GD+NDDEDA EMAIEHVRDRP  LR + +DEY  SK RE+K++T+ +I REL  
Sbjct: 1081 YDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSC 1140

Query: 1141 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLM 1200
            GFQDWR  ++EPS DEEFYMISGETEDT+AEG+IVQA+VR++Q  RAIC L+SGLTGMLM
Sbjct: 1141 GFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLM 1200

Query: 1201 KEDYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDP 1260
            KED+ DD RDI DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ  +N+D 
Sbjct: 1201 KEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDA 1260

Query: 1261 YYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1320
            YYHEDR+SLQ  ++K+RKEKEL +K FK RMIVHPRFQNITAD+A E LSDKD GESIVR
Sbjct: 1261 YYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVR 1320

Query: 1321 PSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1380
            PSSRG +FLTLTLKIY+GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMD
Sbjct: 1321 PSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMD 1380

Query: 1381 RYVDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTY 1440
            RYVDPLV+HLKTML+YRKFRKGTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL+Y
Sbjct: 1381 RYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSY 1440

Query: 1441 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1500
            IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMR
Sbjct: 1441 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMR 1500

Query: 1501 SPATGGSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGL 1560
            SPA  GS   S GS WG S  +GGW+  S DR  S   G      + RN G RDGHPSG 
Sbjct: 1501 SPADHGS---SGGSGWGSSQSEGGWKGNS-DRSGSGRGG------EYRNGGGRDGHPSGA 1534

Query: 1561 PRPYGGRGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA 1612
            PRPYGGRGRGRG    +  N++R D + D    D+ + D                     
Sbjct: 1561 PRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTAD--------------------- 1534

[Close]

BLAST of CmoCh12G009740.1 vs. TAIR 10
Match: AT1G65440.1 (global transcription factor group B1 )

HSP 1 Score: 1974.5 bits (5114), Expect = 0.0e+00
Identity = 1123/1698 (66.14%), Postives = 1300/1698 (76.56%), Query Frame = 0


Query: 1    MGKAVISDEEDEVEL--DDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIV--DDI 60
            M +  ISD+E++ EL  DD EP+ GD  +    +DEED++D    +EYE DGFIV  +D 
Sbjct: 1    MARNAISDDEEDHELEDDDGEPVHGDPAEHDENDDEEDDDDV--GNEYENDGFIVNDEDE 60

Query: 61   EEEDEDVEEREDSDDERQKKKKRKK-----------------NIQRPKGSKKFKRLKKAR 120
            EEE+E+ EER+DSD+ERQKKKK++K                 N++  K  +++KRLKKA+
Sbjct: 61   EEEEEEDEERKDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK--RQYKRLKKAQ 120

Query: 121  RDNVEPSGFSDDEDFVESSRGG--RTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAP 180
            R+     G S D++F   SRGG  R+AE+K+K  LF D                V    P
Sbjct: 121  REQGNGQGESSDDEF--DSRGGTRRSAEDKIKDRLFDD----------------VDVDDP 180

Query: 181  LEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITI 240
             +D+ +EE+   EE+   +G EDEMADFIVDE+ DE G P                    
Sbjct: 181  PDDVGDEEDLVVEED--VVGSEDEMADFIVDED-DEHGPP-------------------- 240

Query: 241  LLYIFNLNLLIVRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHE 300
                          +R   KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L +++
Sbjct: 241  --------------KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQ 300

Query: 301  WREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASW 360
              E+RLEDEFEP V+SEKYMT  DD+IR++D+PERMQISEESTG PP +DE   +EE++W
Sbjct: 301  RMERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPP-VDEISIEEESNW 360

Query: 361  IHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDT 420
            I+  +A+ +    G   G+  SV K DI +FL+L HVQKL+IPFIAMYRKE+  SLL   
Sbjct: 361  IYAQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL--- 420

Query: 421  EHESGDDQDRNE-KTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIY 480
              ++GD    N+ K P  KWHK+ W I DLDKKWLLL+KRK AL  YY KR +EE+ R+Y
Sbjct: 421  --DTGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVY 480

Query: 481  DETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLY 540
            DETRL+LN+ LF+SV+KSLK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS Y
Sbjct: 481  DETRLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQY 540

Query: 541  SICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQA 600
            SICSKAGLWEVA KFGYS+EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   A
Sbjct: 541  SICSKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLA 600

Query: 601  VLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREK 660
            VLKGARHMAA+EISCEP V+K+VR  YM+ AV+STSPT+DGN  IDSFHQFS +KWLREK
Sbjct: 601  VLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREK 660

Query: 661  PLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQR 720
            PLS+FE AQWLLIQK EEEKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQR
Sbjct: 661  PLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQR 720

Query: 721  KLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDE 780
            KLIL+DAL  FLLPSMEKEAR+L+TS+AK+ LL EYG+ LWNKVS GPYQ KE DI+ DE
Sbjct: 721  KLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDE 780

Query: 781  EAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLK 840
            EAAPRVMACCWGPGKP  TFVMLDS+GEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLK
Sbjct: 781  EAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLK 840

Query: 841  FMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRL 900
            FM DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRL
Sbjct: 841  FMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRL 900

Query: 901  YENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPD 960
            YENSRIS +QL  QSG V+RAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFL  D
Sbjct: 901  YENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLD 960

Query: 961  DKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFT 1020
            +KYGMVEQVMV++TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF 
Sbjct: 961  EKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFV 1020

Query: 1021 RKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDV 1080
            RKD +  HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLD+TRIHPESY+LAQELAKD+
Sbjct: 1021 RKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDI 1080

Query: 1081 FDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQ 1140
            +DEDV+GD+NDDEDA EMAIEHVRDRP  LR + +DEY  SK RE+K++T+ +I REL  
Sbjct: 1081 YDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSC 1140

Query: 1141 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLM 1200
            GFQDWR  ++EPS DEEFYMISGETEDT+AEG+IVQA+VR++Q  RAIC L+SGLTGMLM
Sbjct: 1141 GFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLM 1200

Query: 1201 KEDYEDDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDP 1260
            KED+ DD RDI DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ  +N+D 
Sbjct: 1201 KEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDA 1260

Query: 1261 YYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1320
            YYHEDR+SLQ  ++K+RKEKEL +K FK RMIVHPRFQNITAD+A E LSDKD GESIVR
Sbjct: 1261 YYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVR 1320

Query: 1321 PSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1380
            PSSRG +FLTLTLKIY+GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMD
Sbjct: 1321 PSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMD 1380

Query: 1381 RYVDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTY 1440
            RYVDPLV+HLKTML+YRKFRKGTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL+Y
Sbjct: 1381 RYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSY 1440

Query: 1441 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1500
            IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMR
Sbjct: 1441 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMR 1500

Query: 1501 SPATGGSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDGHPSGL 1560
            SPA  GS   S GS WG S  +GGW+  S DR  S   G      + RN G RDGHPSG 
Sbjct: 1501 SPADHGS---SGGSGWGSSQSEGGWKGNS-DRSGSGRGG------EYRNGGGRDGHPSGA 1560

Query: 1561 PRPYGGRGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGKE- 1620
            PRPYGGRGRGRG    +  N++R D + D    D+ + DG  G S   G     S GK+ 
Sbjct: 1561 PRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTADGGWGNSG-GGGWGSESAGKKT 1618

Query: 1621 --AFPGGW--SSGG--SGGGGGNGLSDSGGGGGGWG----------------GTGNSKGN 1651
                 GGW   SGG  S G G  G    GGG GGWG                G+G    +
Sbjct: 1621 GGGSTGGWGSESGGNKSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSD 1618

[Close]

BLAST of CmoCh12G009740.1 vs. TAIR 10
Match: AT1G65440.3 (global transcription factor group B1 )

HSP 1 Score: 1910.6 bits (4948), Expect = 0.0e+00
Identity = 1024/1484 (69.00%), Postives = 1182/1484 (79.65%), Query Frame = 0


Query: 68   DSDDERQKKKKRKKNIQRPKG-----------------SKKFKRLKKARRDNVEPSGFSD 127
            D   +++KKKK+KK  ++ +G                  +++KRLKKA+R+     G S 
Sbjct: 39   DLATKKKKKKKKKKRKKKDEGLDEDDYLLLQDNNVKFKKRQYKRLKKAQREQGNGQGESS 98

Query: 128  DEDFVESSRGG--RTAEEKLKRSLFGDDEGMLLISFYYCLISTVSTLAPLEDIAEEEEQP 187
            D++F   SRGG  R+AE+K+K  LF D                V    P +D+ +EE+  
Sbjct: 99   DDEF--DSRGGTRRSAEDKIKDRLFDD----------------VDVDDPPDDVGDEEDLV 158

Query: 188  EEEEDADIGDEDEMADFIVDEEVDEDGAPLRDLSPHLLVFLLILLPITILLYIFNLNLLI 247
             EE+   +G EDEMADFIVDE+ DE G P                               
Sbjct: 159  VEED--VVGSEDEMADFIVDED-DEHGPP------------------------------- 218

Query: 248  VRSRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFE 307
               +R   KKKK RQ  G   TA+++A+EIFGDVDELL +RK+ L +++  E+RLEDEFE
Sbjct: 219  ---KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQRMERRLEDEFE 278

Query: 308  PIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNS 367
            P V+SEKYMT  DD+IR++D+PERMQISEESTG PP +DE   +EE++WI+  +A+ +  
Sbjct: 279  PTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPP-VDEISIEEESNWIYAQLASQLRE 338

Query: 368  LFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRN 427
              G   G+  SV K DI +FL+L HVQKL+IPFIAMYRKE+  SLL     ++GD    N
Sbjct: 339  SDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL-----DTGDFDGAN 398

Query: 428  E-KTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQL 487
            + K P  KWHK+ W I DLDKKWLLL+KRK AL  YY KR +EE+ R+YDETRL+LN+ L
Sbjct: 399  QGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQYL 458

Query: 488  FDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEV 547
            F+SV+KSLK AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS YSICSKAGLWEV
Sbjct: 459  FESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEV 518

Query: 548  AGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAI 607
            A KFGYS+EQ GL LSLEK+  DELED KETPEEMA NF CAMFE   AVLKGARHMAA+
Sbjct: 519  ANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLAVLKGARHMAAV 578

Query: 608  EISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWL 667
            EISCEP V+K+VR  YM+ AV+STSPT+DGN  IDSFHQFS +KWLREKPLS+FE AQWL
Sbjct: 579  EISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWL 638

Query: 668  LIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGF 727
            LIQK EEEKLL VT KLPE ++N+LI+D NE+YLS GVSK AQLWNEQRKLIL+DAL  F
Sbjct: 639  LIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDALHAF 698

Query: 728  LLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCW 787
            LLPSMEKEAR+L+TS+AK+ LL EYG+ LWNKVS GPYQ KE DI+ DEEAAPRVMACCW
Sbjct: 699  LLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCW 758

Query: 788  GPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVV 847
            GPGKP  TFVMLDS+GEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLKFM DHQPHVV 
Sbjct: 759  GPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVA 818

Query: 848  LGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSDQL 907
            LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRLYENSRIS +QL
Sbjct: 819  LGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQL 878

Query: 908  QGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMV 967
              QSG V+RAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFL  D+KYGMVEQVMV
Sbjct: 879  PQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMV 938

Query: 968  NVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLG 1027
            ++TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF RKD +  HGLG
Sbjct: 939  DITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLG 998

Query: 1028 KKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDEDVKGDAND 1087
            KKVFVNA GFLR+RRSGLAASSSQFIDLLD+TRIHPESY+LAQELAKD++DEDV+GD+ND
Sbjct: 999  KKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSND 1058

Query: 1088 DEDA-EMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEE 1147
            DEDA EMAIEHVRDRP  LR + +DEY  SK RE+K++T+ +I REL  GFQDWR  ++E
Sbjct: 1059 DEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKE 1118

Query: 1148 PSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYEDDSRDI 1207
            PS DEEFYMISGETEDT+AEG+IVQA+VR++Q  RAIC L+SGLTGMLMKED+ DD RDI
Sbjct: 1119 PSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDI 1178

Query: 1208 SDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHEDRSSLQS 1267
             DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ  +N+D YYHEDR+SLQ 
Sbjct: 1179 VDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQL 1238

Query: 1268 EQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTL 1327
             ++K+RKEKEL +K FK RMIVHPRFQNITAD+A E LSDKD GESIVRPSSRG +FLTL
Sbjct: 1239 VKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFLTL 1298

Query: 1328 TLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLK 1387
            TLKIY+GVYAHK+I EGGKE+KDITSL  IGKTL IGEDTFEDLDEVMDRYVDPLV+HLK
Sbjct: 1299 TLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSHLK 1358

Query: 1388 TMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYI 1447
            TML+YRKFRKGTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL+YIRSTNPHHEYI
Sbjct: 1359 TMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHEYI 1418

Query: 1448 GLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAAS 1507
            GLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP  +SAPSIRS+AA VPMRSPA  GS   S
Sbjct: 1419 GLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGS---S 1449

Query: 1508 AGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRHDNRNSGSRDG 1531
             GS WG S  +GGW+  S   DRS +   R G + N   G+  G
Sbjct: 1479 GGSGWGSSQSEGGWKGNS---DRSGS--GRGGEYRNGGWGNSGG 1449

[Close]

BLAST of CmoCh12G009740.1 vs. TAIR 10
Match: AT1G63210.1 (Transcription elongation factor Spt6 )

HSP 1 Score: 1562.7 bits (4045), Expect = 0.0e+00
Identity = 804/1225 (65.63%), Postives = 985/1225 (80.41%), Query Frame = 0


Query: 236  LKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVISEK 295
            +++KK +   G  S AL+ A+++FGD +ELL+LRK++L  +E  E++LEDEFEP+V+SEK
Sbjct: 1    MRRKKMKYKQGTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPMVLSEK 60

Query: 296  YMTEKDDQIREIDMPERMQISEESTGPPPTMDERLEDEEASWIHGHIANGMNSLFGNASG 355
            YMTEKDD+IR++D+PERMQI EE+ G   ++D+    EE++WI+  +            G
Sbjct: 61   YMTEKDDEIRKLDVPERMQIFEEAIG-IVSLDDMSIQEESNWIYARLL--------QEQG 120

Query: 356  QDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHESGDDQDRN-EKTPSL 415
            Q   + K DI++FL++ HVQKL+IPFIAMYRKE+  SLL D+  +  D  D N +K    
Sbjct: 121  QGCLINKDDIVKFLEMFHVQKLEIPFIAMYRKEQCRSLL-DSSDDDHDGSDFNLDKKLET 180

Query: 416  KWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEEACRIYDETRLSLNKQLFDSVMKS 475
            KWHK+LW IQDLD+KW+LL+KRK AL  YY KR +EE C         LNK LF+SV+KS
Sbjct: 181  KWHKVLWMIQDLDRKWVLLRKRKTALFGYYTKRFEEETC------MSDLNKSLFESVIKS 240

Query: 476  LKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYS 535
            L+AAE+EREVDDVDSKFNLHFP  E  +DEGQ+KRP RKS YSICSK G+ E A KFGYS
Sbjct: 241  LQAAETEREVDDVDSKFNLHFPHCE--IDEGQYKRPNRKSQYSICSKFGIKEFANKFGYS 300

Query: 536  SEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKGARHMAAIEISCEPC 595
            +EQ GL LSLEK+  DELED K+TPEEMA N+ CAMF   QAVLKGARHMAA+EISCEP 
Sbjct: 301  AEQLGLALSLEKVFVDELEDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPS 360

Query: 596  VRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVKWLREKPLSRFEDAQWLLIQKAEE 655
            +RK+VR  +M+ AV+STSPT DGNV IDSFH+FSAVKWL EKPL +F+  QWLLIQKAEE
Sbjct: 361  IRKYVRGIFMENAVVSTSPTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEE 420

Query: 656  EKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEK 715
            EKLL VT KLPE  +N++I++ +E+YLS GVSK AQLWNEQRKLIL+DA+ GF+LPSMEK
Sbjct: 421  EKLLQVTFKLPENQMNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEK 480

Query: 716  EARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPAT 775
            EAR+L+TS+AK  LL EYG+ LWNKVS GPY+   N  +S+EEAAPRV+ACCWGPG P T
Sbjct: 481  EARSLLTSRAKTQLLSEYGQVLWNKVSSGPYRRNNN--TSEEEAAPRVLACCWGPGNPET 540

Query: 776  TFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLS 835
            TFVMLDS+GE++DVLY+GS+ +RS++VNDQ+RKK DQ+R LKF+ DHQP V+ L AVNLS
Sbjct: 541  TFVMLDSSGELVDVLYSGSIGLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLS 600

Query: 836  CTRLKDDIYEIIFKMVEENPRD-VGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGI 895
            C RLKD+IYE IF+MVEE P + V   +    +VY DESLPRLYENSRISS+QL  Q+GI
Sbjct: 601  CVRLKDEIYEAIFQMVEELPLNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAGI 660

Query: 896  VKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLTPDDKYGMVEQVMVNVTNQV 955
            VKRAV+LGRYLQNPLAM++TLCGPGR+ILSWKLH  ++FL PD+KY MVEQVMV++TNQV
Sbjct: 661  VKRAVSLGRYLQNPLAMISTLCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQV 720

Query: 956  GLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVN 1015
            G+D NLA SHEWLFSPLQF++GLGPRKAASLQ+SLVRAGSIF RK+ +  HG+GKKVFVN
Sbjct: 721  GIDINLAASHEWLFSPLQFVSGLGPRKAASLQKSLVRAGSIFVRKELIN-HGIGKKVFVN 780

Query: 1016 AVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQELAKDVFDED-VKGDANDDEDAE 1075
            A GFLR+RRSGLA SSSQFIDLLD+TRIHPESY LAQELAKDV+  D V+GD  +D+  E
Sbjct: 781  AAGFLRIRRSGLACSSSQFIDLLDDTRIHPESYGLAQELAKDVYAHDTVRGD--EDDAIE 840

Query: 1076 MAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKRELMQGFQDWRKQYEEPSQDEE 1135
            MAIEHVRD P  LR + +DEY +SKN+E+K++T+  I REL  GFQDWR  ++E   DEE
Sbjct: 841  MAIEHVRDEPASLRKIVLDEYLRSKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEE 900

Query: 1136 FYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLTGMLMKEDYEDDSRDISDLSDR 1195
            FYMISGET++T+ EG+IVQATV+KV   +A C L+ GL G+L+KEDY DD RDI DLS++
Sbjct: 901  FYMISGETKETIGEGRIVQATVKKVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNK 960

Query: 1196 LHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTRNLDPYYHED-RSSLQSEQDKS 1255
            L EGDIVTCK+KSI K RY V LVCKESEMR  +H+   ++D YYHE+ R+S+  E++K 
Sbjct: 961  LCEGDIVTCKVKSILKQRYHVLLVCKESEMR--KHRNLGDVDDYYHEEKRNSVLIEKEKV 1020

Query: 1256 RKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIY 1315
             KE    KK FK RMIVHPRFQNITA++A   LSDK+ GESIVRPSSRG + LTL +KI 
Sbjct: 1021 PKE----KKQFKSRMIVHPRFQNITAEQATVYLSDKNIGESIVRPSSRGLNHLTLMIKIS 1080

Query: 1316 NGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKTMLSY 1375
            + VYA+K+I+EG KE+KDI SL RIGKTLKIG +TFEDLDEVMDRYVDPLV HL TML++
Sbjct: 1081 DNVYANKEIIEGEKENKDIVSLQRIGKTLKIGNETFEDLDEVMDRYVDPLVTHLMTMLNH 1140

Query: 1376 RKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPK 1435
            RKFR GTK+E+D+L+++EK   P  +VY FG+SHEHPG+FIL+YIRS NPHHEYIGLYPK
Sbjct: 1141 RKFRTGTKSEIDDLLRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIGLYPK 1196

Query: 1436 GFKFRKRMFEDIDRLVAYFQRHIDD 1457
            GFKFRKRMF D+D+L AYF+RHID+
Sbjct: 1201 GFKFRKRMFGDLDKLAAYFKRHIDN 1196

The following BLAST results are available for this feature:

BLAST of CmoCh12G009740.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MS85	0.0e+00	66.14	Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9CAM1	0.0e+00	58.71	Transcription elongation factor SPT6-like OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q8UVK2	3.1e-144	27.56	Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1	[more]
Q7KZ85	4.5e-143	28.12	Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2	[more]
Q62383	5.9e-143	27.84	Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=...	[more]

BLAST of CmoCh12G009740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBX2	0.0e+00	95.75	Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC1114440...	[more]
A0A6J1HNV8	0.0e+00	94.97	Transcription elongation factor spt6 OS=Cucurbita maxima OX=3661 GN=LOC111465338...	[more]
A0A6J1D721	0.0e+00	89.22	Transcription elongation factor spt6 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1EUY6	0.0e+00	88.96	Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A1S3B3S8	0.0e+00	89.30	Transcription elongation factor spt6 OS=Cucumis melo OX=3656 GN=LOC103485847 PE=...	[more]

BLAST of CmoCh12G009740.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65440.2	0.0e+00	66.87	global transcription factor group B1	[more]
AT1G65440.1	0.0e+00	66.14	global transcription factor group B1	[more]
AT1G65440.3	0.0e+00	69.00	global transcription factor group B1	[more]
AT1G63210.1	0.0e+00	65.63	Transcription elongation factor Spt6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006641	YqgF/RNase H-like domain	SMART	SM00732	rnase_8s	coord: 760..878 e-value: 2.4E-20 score: 83.6
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 1145..1218 e-value: 2.8E-10 score: 50.1
IPR023323	Tex-like domain superfamily	GENE3D	1.10.3500.10		coord: 506..953 e-value: 1.6E-218 score: 729.9
IPR041692	HHH domain 9	PFAM	PF17674	HHH_9	coord: 1035..1121 e-value: 1.9E-7 score: 31.9
IPR028231	Transcription elongation factor Spt6, YqgF domain	PFAM	PF14639	YqgF	coord: 759..915 e-value: 2.5E-16 score: 59.8
IPR017072	Transcription elongation factor Spt6	PIRSF	PIRSF036947	Spt6	coord: 228..1512 e-value: 0.0 score: 1481.2 coord: 2..195 e-value: 4000.0 score: -23.0
IPR017072	Transcription elongation factor Spt6	PANTHER	PTHR10145	TRANSCRIPTION ELONGATION FACTOR SPT6	coord: 232..1612 coord: 89..191
IPR028088	Helix-turn-helix DNA-binding domain of Spt6	PFAM	PF14641	HTH_44	coord: 332..446 e-value: 8.9E-10 score: 39.0
IPR035420	Spt6, SH2 domain	PFAM	PF14633	SH2_2	coord: 1236..1453 e-value: 1.3E-71 score: 240.4
IPR036860	SH2 domain superfamily	GENE3D	3.30.505.10	SH2 domain	coord: 1367..1463 e-value: 1.1E-26 score: 94.7
IPR036860	SH2 domain superfamily	GENE3D	3.30.505.10	SH2 domain	coord: 1255..1366 e-value: 5.7E-33 score: 114.9
IPR036860	SH2 domain superfamily	SUPERFAMILY	55550	SH2 domain	coord: 1272..1358
None	No IPR available	GENE3D	2.40.50.140		coord: 1140..1228 e-value: 3.0E-9 score: 38.8
None	No IPR available	GENE3D	1.10.150.850		coord: 287..1023 e-value: 1.6E-218 score: 729.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1476..1650
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1228..1255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1512..1527
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1479..1511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1560..1574
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..68
None	No IPR available	PANTHER	PTHR10145:SF7	TRANSCRIPTION ELONGATION FACTOR SPT6	coord: 232..1612
None	No IPR available	PANTHER	PTHR10145:SF7	TRANSCRIPTION ELONGATION FACTOR SPT6	coord: 89..191
None	No IPR available	SUPERFAMILY	158832	Tex N-terminal region-like	coord: 356..739
IPR023319	Tex-like protein, HTH domain superfamily	GENE3D	1.10.10.650		coord: 320..505 e-value: 1.6E-218 score: 729.9
IPR032706	Transcription elongation factor Spt6, helix-hairpin-helix motif	PFAM	PF14635	HHH_7	coord: 919..1020 e-value: 2.2E-20 score: 72.9
IPR042066	Spt6, Death-like domain	GENE3D	1.10.10.2740		coord: 1029..1120 e-value: 1.6E-218 score: 729.9
IPR037027	YqgF/RNase H-like domain superfamily	GENE3D	3.30.420.140		coord: 750..1139 e-value: 1.6E-218 score: 729.9
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 1147..1218 score: 11.899143
IPR035019	Spt6, SH2 domain, N terminus	CDD	cd09918	SH2_Nterm_SPT6_like	coord: 1269..1357 e-value: 1.16732E-32 score: 120.035
IPR035018	Spt6, SH2 domain, C terminus	CDD	cd09928	SH2_Cterm_SPT6_like	coord: 1368..1454 e-value: 1.81269E-31 score: 116.941
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 931..1021
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 1034..1122
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1142..1224
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 760..915

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh12G009740	CmoCh12G009740	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G009740.1:exon:2318	CmoCh12G009740.1:exon:2318	exon
CmoCh12G009740.1:exon:2317	CmoCh12G009740.1:exon:2317	exon
CmoCh12G009740.1:exon:2316	CmoCh12G009740.1:exon:2316	exon
CmoCh12G009740.1:exon:2315	CmoCh12G009740.1:exon:2315	exon
CmoCh12G009740.1:exon:2314	CmoCh12G009740.1:exon:2314	exon
CmoCh12G009740.1:exon:2313	CmoCh12G009740.1:exon:2313	exon
CmoCh12G009740.1:exon:2312	CmoCh12G009740.1:exon:2312	exon
CmoCh12G009740.1:exon:2311	CmoCh12G009740.1:exon:2311	exon
CmoCh12G009740.1:exon:2310	CmoCh12G009740.1:exon:2310	exon
CmoCh12G009740.1:exon:2309	CmoCh12G009740.1:exon:2309	exon
CmoCh12G009740.1:exon:2308	CmoCh12G009740.1:exon:2308	exon
CmoCh12G009740.1:exon:2307	CmoCh12G009740.1:exon:2307	exon
CmoCh12G009740.1:exon:2306	CmoCh12G009740.1:exon:2306	exon
CmoCh12G009740.1:exon:2305	CmoCh12G009740.1:exon:2305	exon
CmoCh12G009740.1:exon:2304	CmoCh12G009740.1:exon:2304	exon
CmoCh12G009740.1:exon:2303	CmoCh12G009740.1:exon:2303	exon
CmoCh12G009740.1:exon:2302	CmoCh12G009740.1:exon:2302	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_17	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_16	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_15	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_14	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_13	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_12	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_11	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_10	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_9	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_8	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_7	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_6	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_5	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_4	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_3	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds_2	CDS
CmoCh12G009740.1:cds	CmoCh12G009740.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G009740.1:five_prime_utr	CmoCh12G009740.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh12G009740.1	CmoCh12G009740.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
biological_process	GO:0042789	mRNA transcription by RNA polymerase II
biological_process	GO:0034728	nucleosome organization
biological_process	GO:0050684	regulation of mRNA processing
biological_process	GO:0006414	translational elongation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008023	transcription elongation factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0042393	histone binding
molecular_function	GO:0031491	nucleosome binding
molecular_function	GO:0003746	translation elongation factor activity