CmoCh12G008330.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G008330.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	tetraspanin-8-like
Location	Cmo_Chr12: 7632520 .. 7635001 (-)
Sequence length	813
RNA-Seq Expression	CmoCh12G008330.1
Synteny	CmoCh12G008330.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGAATAAGCAACAGCCTGGTCGGAGTCCTGAACTTCATCACCTTCTTACTCTCAATCCCAATTCTGCTGGTCGGCATTTGGCTGAGCACACAAGCCACCACCGAATGCGCCAAGTACTTAGACAAACCCGTAATCATAATCGGCGTTTTTCTAATGTTCATATCACTCGCCGGCGTTTGCGGCGCGTGGTGTAGAATCTCTTGGCTTCTATGGCTATACCTTTTGGTCATGTTTGTTCTTATTGCTGTGCTCTTTGCTTTCACTATCTTTGCTTTTGTGGTCACCAATAAGGGCGCCGGCGAGGCCTTGTCGCACCGGGGGTATAAGGAGTATAGGCTTGGGGATTACTCTGATTGGCTGCAGAATAGGGTGAGTTCTAAGGACAATTGGAGCACAATTAAGAGCTGCTTGATTGATGCCAAGATTTGCAACAGATTTTCTGAGAAGTATTCTATGGATAATGTTGAAGAGTTCTATAAGGAGAGCTTGTCTTCCTTTCAGGTAACAATGCTATTCAATTTGAGTTTTTGAGCTGGTGGGAATTTGGTTAATGTTAGAAAGATGTGTTTAAAACACGCTATTGTAGATTTTTTATAGCGTTTTTCGTATGTTGTGATAGTCTACGTTGTTCAAAGTTTGAGATTTTTTTATAGGGCTCTTTTTTATAGCTATAATAGATGCTATAGTAGAGTAGAAAATTATAGCTTCTGTATGTTGCTATGAAAATGTTTTATAACGTTTTTTTTGTATGTTTGTGTGACAGCCCATGTTATTAAAAGTCTGAGATTTTGTTTTTTTGTTTTTTTTTATAGCTGTAATGGATGCTATAATAGAGTAGGAAACTATAGGTTATATATTATGAAAACGTTTTATAGCTTTTTTTTTTTTGTATGTCGTGACAGCCCATGTTATTAAAAGTATGAGACTTTGTTTTTTTATAGCGGTAATGGATGCTATGATAGAGTAAGAAATTATAGTTTATATATGTTTCTACGAAAACATTTTATAGCGTTTTTCGTATGTCATGACTACCTATGTTATTAAAAGTTTGAGACTCTATTTTTTTTTCTAGCTGTAATGGATGCTATAATAGAGTAGGAAACTATAGTTTATATATGTTGCTATGAAAACATTTTATAGCGTTTTTCACATGTCGTGACCGCCTATGTTATTAAAAGTCTGAGACTTTGTTTTTTTTATAACTATACTGGATGCTATAATAGAGTAGGAAACTATATCTTATATATGTTACTATTGAACATTTTATAGCGTATTTTGTATGTCGTGACAGCCTATGTTATTAAAAGTTTGAGACTTTATTTTTTTTCATAGCTATAATTGATGCTATAAAGAGTAGGAAACTATATATTCTATATGTTGCTATGAAAACGTATTATAGCGTTTTTCGACCGTCCATGTTATTCAAAGTCTGAGACTTTTTTTTTTTTTTTTTAATAGCGGTAATGGATGCTATAATAAAATAGGAAACTATAGCTTATATATGTTGCTATGAAAATATTTTATAGCGCTTTTCGTATGTCGTGACAGTCCAGGTTATTAAAAGGTTGAGACTTCGTTTTTTTATAGCTATAATGGATGCTATAATAGAGTAGGAAACTATAGCTTATATTATGAAAACATTTTATAGCGTTTTATTTATTTTTGTTTAATATTTGTTTACTTTTTTGATTTATTTTTTATTGGGTTAGCTCGACCGACCCTTTGCGGGTTAACATTTTTTTATTAGGTCAACTAGACACACACTGTGAGATACCACTTCAGTTGAGGGAGGAGAACAAATATTCTTTATATGAGTGTGAAATCTTCTTTTTAGCATACTCGTTTTAAAAACCAAGGTTAAAAGGGAAAACTCAAAGAGAACACTATCGGTTAGTGGTGGGTTTAGGCTGTTACTAACCGAAAAATAGGGTTACAACCCAACCTTACCTTATTTTTAAGATTATTATGATGATTACGAATATTTGATGTTTATAATTAATGTTAGTGATGCATTTTAATTTTTGAATATTTGATAATCCAACCTTACCTTATTTTTAAGATCATTATAATGATTACGAATATTTAACGTTTATAATCAATATTAGTGTTCTTTATATACATCACCTTCTAATTTTGTTTCTACACTAATTTTGTTTCTTCTAACGTGCAGTTTGGTTGTTGTAAACCTTCAAACGACTGCGATTTCAAGTATGTGAGCCCAATTGTGTGGGACAAGAACAACGCTACAACCTCGCCCAACCCCGACTGTAAATTATGGGGAAATGAGCCCGACGTTTTGTGCTTCAACTGCTTGGCCTGCAAGGCTGGCTTGCTCGATAATATTAAGACAAACTGGAAGAAGGTTGCCTTAGTCAACATCGTATTCTTCGTCTTCCTCATCATCGTCTACTCGGTCGGTTGCTGTGCTTTTCGAAACAATAGAGAATACAATGCCTATCATCGACAAAGGAAGTGA

mRNA sequence

ATGCCTCGAATAAGCAACAGCCTGGTCGGAGTCCTGAACTTCATCACCTTCTTACTCTCAATCCCAATTCTGCTGGTCGGCATTTGGCTGAGCACACAAGCCACCACCGAATGCGCCAAGTACTTAGACAAACCCGTAATCATAATCGGCGTTTTTCTAATGTTCATATCACTCGCCGGCGTTTGCGGCGCGTGGTGTAGAATCTCTTGGCTTCTATGGCTATACCTTTTGGTCATGTTTGTTCTTATTGCTGTGCTCTTTGCTTTCACTATCTTTGCTTTTGTGGTCACCAATAAGGGCGCCGGCGAGGCCTTGTCGCACCGGGGGTATAAGGAGTATAGGCTTGGGGATTACTCTGATTGGCTGCAGAATAGGGTGAGTTCTAAGGACAATTGGAGCACAATTAAGAGCTGCTTGATTGATGCCAAGATTTGCAACAGATTTTCTGAGAAGTATTCTATGGATAATGTTGAAGAGTTCTATAAGGAGAGCTTGTCTTCCTTTCAGTTTGGTTGTTGTAAACCTTCAAACGACTGCGATTTCAAGTATGTGAGCCCAATTGTGTGGGACAAGAACAACGCTACAACCTCGCCCAACCCCGACTGTAAATTATGGGGAAATGAGCCCGACGTTTTGTGCTTCAACTGCTTGGCCTGCAAGGCTGGCTTGCTCGATAATATTAAGACAAACTGGAAGAAGGTTGCCTTAGTCAACATCGTATTCTTCGTCTTCCTCATCATCGTCTACTCGGTCGGTTGCTGTGCTTTTCGAAACAATAGAGAATACAATGCCTATCATCGACAAAGGAAGTGA

Coding sequence (CDS)

ATGCCTCGAATAAGCAACAGCCTGGTCGGAGTCCTGAACTTCATCACCTTCTTACTCTCAATCCCAATTCTGCTGGTCGGCATTTGGCTGAGCACACAAGCCACCACCGAATGCGCCAAGTACTTAGACAAACCCGTAATCATAATCGGCGTTTTTCTAATGTTCATATCACTCGCCGGCGTTTGCGGCGCGTGGTGTAGAATCTCTTGGCTTCTATGGCTATACCTTTTGGTCATGTTTGTTCTTATTGCTGTGCTCTTTGCTTTCACTATCTTTGCTTTTGTGGTCACCAATAAGGGCGCCGGCGAGGCCTTGTCGCACCGGGGGTATAAGGAGTATAGGCTTGGGGATTACTCTGATTGGCTGCAGAATAGGGTGAGTTCTAAGGACAATTGGAGCACAATTAAGAGCTGCTTGATTGATGCCAAGATTTGCAACAGATTTTCTGAGAAGTATTCTATGGATAATGTTGAAGAGTTCTATAAGGAGAGCTTGTCTTCCTTTCAGTTTGGTTGTTGTAAACCTTCAAACGACTGCGATTTCAAGTATGTGAGCCCAATTGTGTGGGACAAGAACAACGCTACAACCTCGCCCAACCCCGACTGTAAATTATGGGGAAATGAGCCCGACGTTTTGTGCTTCAACTGCTTGGCCTGCAAGGCTGGCTTGCTCGATAATATTAAGACAAACTGGAAGAAGGTTGCCTTAGTCAACATCGTATTCTTCGTCTTCCTCATCATCGTCTACTCGGTCGGTTGCTGTGCTTTTCGAAACAATAGAGAATACAATGCCTATCATCGACAAAGGAAGTGA

Protein sequence

MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAGVCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSDWLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCDFKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIVFFVFLIIVYSVGCCAFRNNREYNAYHRQRK

Homology

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 4.0e-97
Identity = 162/267 (60.67%), Postives = 211/267 (79.03%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           M R SN+LVG+LNF+ FLLSIPIL  GIWLS + +TEC ++LDKPVI +GVFLM +++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + G+ CR++WLLW+YL VMF+LI ++F  T+FAFVVTNKGAGEA+  +GYKEY+LGDYS 
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV +  NW+ I+SCL+++K+C++   K+    V  FYKE L++ Q GCCKPS++C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           F+YV+P  W KN   T  NPDC+ W N  + LCF+C +CKAGLLDN+K+ WKKVA+VNIV
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHR 268
           F VFLIIVYSVGCCAFRNN+  ++Y R
Sbjct: 241 FLVFLIIVYSVGCCAFRNNKRDDSYSR 267

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-93
Identity = 161/263 (61.22%), Postives = 205/263 (77.95%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           M + SN+L+G+LNF TFLLSIPIL  GIWL   A TEC ++LDKP++++G+FLMF+S+AG
Sbjct: 1   MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + GA CR+S LLWLYL  MF+LI + F FTIFAF VTN+GAGE +S RGYKEY + DYS+
Sbjct: 61  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV++  NW  I+SCL+ + +C+ +  +Y+  NVE+FYK +L++ Q GCCKPSNDC+
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180

Query: 181 FKYVSPIVWDKNNATTSP--NPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVN 240
           F YV+P  W K   T  P  N DC +W N+P  LC++C ACKAGLLDNIK +WKKVA VN
Sbjct: 181 FTYVNPTTWTK---TPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVN 240

Query: 241 IVFFVFLIIVYSVGCCAFRNNRE 262
           IVF +FLIIVYSVGCCAFRNNR+
Sbjct: 241 IVFLIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 6.2e-90
Identity = 152/261 (58.24%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           M R SNSLVG+LNF  FLLS+PIL  GIWLS +ATT+C ++LDKP+I +GVFLM I++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           V G+ CR++WLLW YL VMF LI ++  FTIFAFVVT+KG+GE +  + YKEYRL  YSD
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV++  +W++I+SCL ++K C       +   V +FYKE L++F+ GCCKPSNDCD
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           F Y++   W+K +  T  N DC+LW NE   LC+NC ACKAG LDN+K  WK+VA+VNI+
Sbjct: 181 FTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNII 240

Query: 241 FFVFLIIVYSVGCCAFRNNRE 262
           F V L++VY++GCCAFRNN+E
Sbjct: 241 FLVLLVVVYAMGCCAFRNNKE 260

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-64
Identity = 118/259 (45.56%), Postives = 172/259 (66.41%), Query Frame = 0


Query: 3   RISNSLVGVLNFITFLLSIPILLVGIWLSTQA-TTECAKYLDKPVIIIGVFLMFISLAGV 62
           R SN L+G++NF+TFLLSIPIL  GIWLS++A +T+C ++L  P+I+IG+ +M +SLAG 
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  CGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSDW 122
            GA  R  +L+WLYL+VM ++IA L  F IFA+ VT+KG+G  + +RGY +Y L DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 123 LQNRVSSKDNWSTIKSCLIDAKICNRFSEKYS--MDNVEEFYKESLSSFQFGCCKPSNDC 182
           L++RVS    W  I SCL D+  C +    ++   +  + F+   LS  + GCCKP  DC
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181

Query: 183 DFKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNI 242
            F YV+   WD       PN DC +W N+  +LC+ C +CKAG+L ++K +W+KV+++NI
Sbjct: 182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFFVFLIIVYSVGCCAFRN 259
           V  + L+I Y +   A+RN
Sbjct: 242 VVLIILVIFYVIAYAAYRN 260

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-64
Identity = 121/265 (45.66%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 3   RISNSLVGVLNFITFLLSIPILLVGIWLSTQA-TTECAKYLDKPVIIIGVFLMFISLAGV 62
           R  ++L+G++NF TFLLSIPIL  GIWLS++A +T+C ++L  P+IIIG+ +M ISLAG+
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  CGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSDW 122
            GA  +  +L+WLYL  MF +IA L  FTIFA+VVT+KG+G  + +R Y +Y L DYS W
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121

Query: 123 LQNRVSSKDNWSTIKSCLIDAKICNRFSEKYS--MDNVEEFYKESLSSFQFGCCKPSNDC 182
           L++RV+    W  I SC+ D+ +C +     +   +    FY  +LS  + GCCKP  DC
Sbjct: 122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181

Query: 183 DFKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNI 242
            + YV+  VW        PNPDC LW N+  +LC+ C +CKAG+L ++K +W+KV+++NI
Sbjct: 182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFFVFLIIVYSVGCCAFRN-NREYN 264
           V  + L+I Y + C A++N  R YN
Sbjct: 242 VVVIILVIFYVIACAAYQNVKRMYN 266

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy TrEMBL
Match: A0A6J1FHK9 (tetraspanin-8-like OS=Cucurbita moschata OX=3662 GN=LOC111444215 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 3.7e-154
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG
Sbjct: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD
Sbjct: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD
Sbjct: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV
Sbjct: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 271
           FFVFLIIVYSVGCCAFRNNREYNAYHRQRK
Sbjct: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 270

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy TrEMBL
Match: A0A6J1HYG8 (tetraspanin-8-like OS=Cucurbita maxima OX=3661 GN=LOC111468629 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 253/270 (93.70%), Postives = 261/270 (96.67%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           MP ISNSLVGVLNFITFLLSIP+LLVGIWLSTQATTECAKYLDKP+IIIGVFLMFISLAG
Sbjct: 1   MPGISNSLVGVLNFITFLLSIPVLLVGIWLSTQATTECAKYLDKPIIIIGVFLMFISLAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           VCGAWCRISWLLW+YLLVMFVLI VLFAF+IF+FVVTNKGAGEALSHRGYKEYRLGDYSD
Sbjct: 61  VCGAWCRISWLLWVYLLVMFVLIVVLFAFSIFSFVVTNKGAGEALSHRGYKEYRLGDYSD 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQNRVSSKDNWS IKSCLID KICNRFS+KYSMDN E FYKE LSS Q GCCKPSNDC+
Sbjct: 121 WLQNRVSSKDNWSKIKSCLIDGKICNRFSKKYSMDNDEHFYKERLSSIQSGCCKPSNDCN 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           FKYVSPIVWDKNN+TTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV
Sbjct: 181 FKYVSPIVWDKNNSTTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 271
           FFVFLIIVYSVGCCAFRNNREYNAYHRQRK
Sbjct: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 270

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy TrEMBL
Match: A0A6J1DIW9 (tetraspanin-8-like OS=Momordica charantia OX=3673 GN=LOC111020891 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119
Identity = 213/270 (78.89%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           MPRISN+LVG+LNFITFLLSIPIL  G+WLS Q +TEC KYLDKPVIIIGVFLM ISLAG
Sbjct: 1   MPRISNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKYLDKPVIIIGVFLMLISLAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + GA CRISWLLW+YLLVMFVLI +LFAFTIFAFVVTNKGAGE LS+RGYKEYRLGDYSD
Sbjct: 61  LLGACCRISWLLWVYLLVMFVLIVILFAFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSD 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RVS+  NW+ IKSCLID KIC+ F++KY  D VE+FYKE LS+ Q GCCKPSNDC+
Sbjct: 121 WLQKRVSNAKNWNKIKSCLIDGKICSSFADKYVKDTVEDFYKEHLSALQSGCCKPSNDCN 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           F YVSP  W+K  AT SPNPDC  W N+P++LCFNC ACKAGLLDNIK+NWKKVA+VNIV
Sbjct: 181 FDYVSPTFWNK-TATNSPNPDCNFWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 271
           F VFLIIVYSVGCCAFRNNRE NAYHRQ K
Sbjct: 241 FLVFLIIVYSVGCCAFRNNREDNAYHRQWK 269

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy TrEMBL
Match: A0A6J1K7I5 (tetraspanin-8-like OS=Cucurbita maxima OX=3661 GN=LOC111492367 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 9.5e-118
Identity = 209/270 (77.41%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           MPR SN+LVG+LNFITFLLSIPIL  G+WLS Q +TEC K+LDKPVIIIGVFLM ISLAG
Sbjct: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + GA CRISWLLW+YLLVMFVLI +LF+FTIFAFVVTNKGAGE LS+RGYKEYRLGDYS 
Sbjct: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV+S  NW+ IKSCLID KIC+ F++KY  D VE+FY+E LS+ Q GCCKPSNDC+
Sbjct: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           + YVSPI W++ NATTS NPDC LW N+P++LCFNC ACKAGLLDNIK+NWKKVA+VNIV
Sbjct: 181 YTYVSPIFWNR-NATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 271
           F VFLIIVYSVGCCAFRNNRE NAYHRQ K
Sbjct: 241 FLVFLIIVYSVGCCAFRNNREDNAYHRQWK 269

[Close]

BLAST of CmoCh12G008330.1 vs. ExPASy TrEMBL
Match: A0A6J1EPQ8 (tetraspanin-8-like OS=Cucurbita moschata OX=3662 GN=LOC111436259 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 9.5e-118
Identity = 209/270 (77.41%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           MPR SN+LVG+LNFITFLLSIPIL  G+WLS Q +TEC K+LDKPVIIIGVFLM ISLAG
Sbjct: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + GA CRISWLLW+YLLVMFVLI +LF+FTIFAFVVTNKGAGE LS+RGYKEYRLGDYS 
Sbjct: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV+S  NW+ IKSCLID KIC+ F++KY  D VE+FY+E LS+ Q GCCKPSNDC+
Sbjct: 121 WLQKRVNSAKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           + YVSPI W++ NATTS NPDC LW N+P++LCFNC ACKAGLLDNIK+NWKKVA+VNIV
Sbjct: 181 YTYVSPIFWNR-NATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHRQRK 271
           F VFLIIVYSVGCCAFRNNRE NAYHRQ K
Sbjct: 241 FLVFLIIVYSVGCCAFRNNREDNAYHRQWK 269

[Close]

BLAST of CmoCh12G008330.1 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 355.9 bits (912), Expect = 2.8e-98
Identity = 162/267 (60.67%), Postives = 211/267 (79.03%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           M R SN+LVG+LNF+ FLLSIPIL  GIWLS + +TEC ++LDKPVI +GVFLM +++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + G+ CR++WLLW+YL VMF+LI ++F  T+FAFVVTNKGAGEA+  +GYKEY+LGDYS 
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV +  NW+ I+SCL+++K+C++   K+    V  FYKE L++ Q GCCKPS++C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           F+YV+P  W KN   T  NPDC+ W N  + LCF+C +CKAGLLDN+K+ WKKVA+VNIV
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

Query: 241 FFVFLIIVYSVGCCAFRNNREYNAYHR 268
           F VFLIIVYSVGCCAFRNN+  ++Y R
Sbjct: 241 FLVFLIIVYSVGCCAFRNNKRDDSYSR 267

[Close]

BLAST of CmoCh12G008330.1 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 )

HSP 1 Score: 344.4 bits (882), Expect = 8.5e-95
Identity = 161/263 (61.22%), Postives = 205/263 (77.95%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           M + SN+L+G+LNF TFLLSIPIL  GIWL   A TEC ++LDKP++++G+FLMF+S+AG
Sbjct: 1   MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           + GA CR+S LLWLYL  MF+LI + F FTIFAF VTN+GAGE +S RGYKEY + DYS+
Sbjct: 61  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV++  NW  I+SCL+ + +C+ +  +Y+  NVE+FYK +L++ Q GCCKPSNDC+
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180

Query: 181 FKYVSPIVWDKNNATTSP--NPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVN 240
           F YV+P  W K   T  P  N DC +W N+P  LC++C ACKAGLLDNIK +WKKVA VN
Sbjct: 181 FTYVNPTTWTK---TPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVN 240

Query: 241 IVFFVFLIIVYSVGCCAFRNNRE 262
           IVF +FLIIVYSVGCCAFRNNR+
Sbjct: 241 IVFLIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of CmoCh12G008330.1 vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 )

HSP 1 Score: 332.0 bits (850), Expect = 4.4e-91
Identity = 152/261 (58.24%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 1   MPRISNSLVGVLNFITFLLSIPILLVGIWLSTQATTECAKYLDKPVIIIGVFLMFISLAG 60
           M R SNSLVG+LNF  FLLS+PIL  GIWLS +ATT+C ++LDKP+I +GVFLM I++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  VCGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSD 120
           V G+ CR++WLLW YL VMF LI ++  FTIFAFVVT+KG+GE +  + YKEYRL  YSD
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query: 121 WLQNRVSSKDNWSTIKSCLIDAKICNRFSEKYSMDNVEEFYKESLSSFQFGCCKPSNDCD 180
           WLQ RV++  +W++I+SCL ++K C       +   V +FYKE L++F+ GCCKPSNDCD
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180

Query: 181 FKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNIV 240
           F Y++   W+K +  T  N DC+LW NE   LC+NC ACKAG LDN+K  WK+VA+VNI+
Sbjct: 181 FTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNII 240

Query: 241 FFVFLIIVYSVGCCAFRNNRE 262
           F V L++VY++GCCAFRNN+E
Sbjct: 241 FLVLLVVVYAMGCCAFRNNKE 260

[Close]

BLAST of CmoCh12G008330.1 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65
Identity = 118/259 (45.56%), Postives = 172/259 (66.41%), Query Frame = 0


Query: 3   RISNSLVGVLNFITFLLSIPILLVGIWLSTQA-TTECAKYLDKPVIIIGVFLMFISLAGV 62
           R SN L+G++NF+TFLLSIPIL  GIWLS++A +T+C ++L  P+I+IG+ +M +SLAG 
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  CGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSDW 122
            GA  R  +L+WLYL+VM ++IA L  F IFA+ VT+KG+G  + +RGY +Y L DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 123 LQNRVSSKDNWSTIKSCLIDAKICNRFSEKYS--MDNVEEFYKESLSSFQFGCCKPSNDC 182
           L++RVS    W  I SCL D+  C +    ++   +  + F+   LS  + GCCKP  DC
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181

Query: 183 DFKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNI 242
            F YV+   WD       PN DC +W N+  +LC+ C +CKAG+L ++K +W+KV+++NI
Sbjct: 182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFFVFLIIVYSVGCCAFRN 259
           V  + L+I Y +   A+RN
Sbjct: 242 VVLIILVIFYVIAYAAYRN 260

[Close]

BLAST of CmoCh12G008330.1 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65
Identity = 121/265 (45.66%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 3   RISNSLVGVLNFITFLLSIPILLVGIWLSTQA-TTECAKYLDKPVIIIGVFLMFISLAGV 62
           R  ++L+G++NF TFLLSIPIL  GIWLS++A +T+C ++L  P+IIIG+ +M ISLAG+
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  CGAWCRISWLLWLYLLVMFVLIAVLFAFTIFAFVVTNKGAGEALSHRGYKEYRLGDYSDW 122
            GA  +  +L+WLYL  MF +IA L  FTIFA+VVT+KG+G  + +R Y +Y L DYS W
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121

Query: 123 LQNRVSSKDNWSTIKSCLIDAKICNRFSEKYS--MDNVEEFYKESLSSFQFGCCKPSNDC 182
           L++RV+    W  I SC+ D+ +C +     +   +    FY  +LS  + GCCKP  DC
Sbjct: 122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181

Query: 183 DFKYVSPIVWDKNNATTSPNPDCKLWGNEPDVLCFNCLACKAGLLDNIKTNWKKVALVNI 242
            + YV+  VW        PNPDC LW N+  +LC+ C +CKAG+L ++K +W+KV+++NI
Sbjct: 182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFFVFLIIVYSVGCCAFRN-NREYN 264
           V  + L+I Y + C A++N  R YN
Sbjct: 242 VVVIILVIFYVIACAAYQNVKRMYN 266

The following BLAST results are available for this feature:

BLAST of CmoCh12G008330.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8Q6	4.0e-97	60.67	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9SUD4	1.2e-93	61.22	Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1	[more]
Q9M0B7	6.2e-90	58.24	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
Q9M1E7	1.5e-64	45.56	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	1.5e-64	45.66	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]

BLAST of CmoCh12G008330.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHK9	3.7e-154	100.00	tetraspanin-8-like OS=Cucurbita moschata OX=3662 GN=LOC111444215 PE=3 SV=1	[more]
A0A6J1HYG8	2.4e-145	93.70	tetraspanin-8-like OS=Cucurbita maxima OX=3661 GN=LOC111468629 PE=3 SV=1	[more]
A0A6J1DIW9	1.3e-119	78.89	tetraspanin-8-like OS=Momordica charantia OX=3673 GN=LOC111020891 PE=3 SV=1	[more]
A0A6J1K7I5	9.5e-118	77.41	tetraspanin-8-like OS=Cucurbita maxima OX=3661 GN=LOC111492367 PE=3 SV=1	[more]
A0A6J1EPQ8	9.5e-118	77.41	tetraspanin-8-like OS=Cucurbita moschata OX=3662 GN=LOC111436259 PE=3 SV=1	[more]

BLAST of CmoCh12G008330.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23810.1	2.8e-98	60.67	tetraspanin8	[more]
AT4G28050.1	8.5e-95	61.22	tetraspanin7	[more]
AT4G30430.1	4.4e-91	58.24	tetraspanin9	[more]
AT3G45600.1	1.1e-65	45.56	tetraspanin3	[more]
AT5G60220.1	1.1e-65	45.66	tetraspanin4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 66..94 score: 18.34 coord: 7..30 score: 31.29 coord: 39..65 score: 24.35
None	No IPR available	PANTHER	PTHR32191:SF69	TETRASPANIN-8	coord: 1..267
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 7..255 e-value: 8.1E-33 score: 114.0
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..267

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh12G008330	CmoCh12G008330	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G008330.1:exon:3559	CmoCh12G008330.1:exon:3559	exon
CmoCh12G008330.1:exon:3558	CmoCh12G008330.1:exon:3558	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G008330.1:cds	CmoCh12G008330.1:cds_2	CDS
CmoCh12G008330.1:cds	CmoCh12G008330.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh12G008330.1	CmoCh12G008330.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma