CmoCh11G019700.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G019700.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr11: 13560940 .. 13561368 (-)
Sequence length	222
RNA-Seq Expression	CmoCh11G019700.1
Synteny	CmoCh11G019700.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTCAGCTTGTTTTGGGCGAAGGATTTTGTGGAGCTGAGGTTTGGATTAACCAGCATTTCTTGTGAAGCTTCCAACATCTTAACTTGTGAGTAACAATCACTCTAATCACCTGTTATTATGTTCATCTGAATCAGGTAATGAAATTTATAGTTGTGTTTTTTTTTTAATAGCTTTTATTTCTGAAGGAGAAAGAATTACAGCCTCCTGTTACACGTGCAAATGCAGGGGTATTCTTGTAAATTCAGGAAATATTCTCACGTGAGAAAGTGGCTTGTGTTATGCCTTGCTTTTGACCTGTGCATGCATGCGAAAGTGAAACCATTATTGTTCTGTTGAAATATTTTGTTAGGAATATTGGCAGAAATCTTTCTTCCAGGTTCCCCAGTCGCCACTTTACACTTTAAAAACAAAGCCTGCCATTAA

mRNA sequence

ATGATTTTCAGCTTGTTTTGGGCGAAGGATTTTGTGGAGCTGAGGTTTGGATTAACCAGCATTTCTTGTGAAGCTTCCAACATCTTAACTTCTTTTATTTCTGAAGGAGAAAGAATTACAGCCTCCTGTTACACGTGCAAATGCAGGGGAATATTGGCAGAAATCTTTCTTCCAGGTTCCCCAGTCGCCACTTTACACTTTAAAAACAAAGCCTGCCATTAA

Coding sequence (CDS)

ATGATTTTCAGCTTGTTTTGGGCGAAGGATTTTGTGGAGCTGAGGTTTGGATTAACCAGCATTTCTTGTGAAGCTTCCAACATCTTAACTTCTTTTATTTCTGAAGGAGAAAGAATTACAGCCTCCTGTTACACGTGCAAATGCAGGGGAATATTGGCAGAAATCTTTCTTCCAGGTTCCCCAGTCGCCACTTTACACTTTAAAAACAAAGCCTGCCATTAA

Protein sequence

MIFSLFWAKDFVELRFGLTSISCEASNILTSFISEGERITASCYTCKCRGILAEIFLPGSPVATLHFKNKACH

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh11G019700.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G019700.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G019700.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh11G019700	CmoCh11G019700	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G019700.1:exon:10215	CmoCh11G019700.1:exon:10215	exon
CmoCh11G019700.1:exon:10216	CmoCh11G019700.1:exon:10216	exon
CmoCh11G019700.1:exon:10217	CmoCh11G019700.1:exon:10217	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G019700.1:cds	CmoCh11G019700.1:cds_3	CDS
CmoCh11G019700.1:cds	CmoCh11G019700.1:cds_2	CDS
CmoCh11G019700.1:cds	CmoCh11G019700.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh11G019700.1	CmoCh11G019700.1-protein	polypeptide