CmoCh11G006530.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G006530.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DUF761 domain-containing protein
Location	Cmo_Chr11: 3130262 .. 3130849 (+)
Sequence length	588
RNA-Seq Expression	CmoCh11G006530.1
Synteny	CmoCh11G006530.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGAAGAAATTCTGGAATATGGTTCGAGCAATCGCGTTGATGCTGCGAAAAGAGTTATCAAAAGGCCGAATCATAATGTCCGATCTTAATTTGATGATGAAGAGAGGCAAGCTCGCCGGAAAGGCTATGCTCAATCTGATGCATCTCCACCAGAGCTCCGGTACTCTCAGCAGCCAGACCACCACCGATATAGCTAACTCCATCGCCATTGCTCCACAGGACTACGAGTTCAGTTGCAGTAACAGCCCTGCTTTTCCAGCGCTGCAGATCTACGGAAAGCGTGGTGGCAAGAACCGCCATCGATACAACGACGTAACCACCGTCGGCGCCGTGAAACGAGTACTACAGATGTTAAACCGCGAGGCAGCAACAGCGGATGTGGCGTCGCCGATGGTGAAGTTTGGAAAGAATCCGACGGTTAGAGTAACAGACTCGCCGTTTCCGGTGAAGGACGACGGGGACCACAAGGTGGACGAAGCGGCAGAGGCGTTTATCAAACGGTTTTACAGTAACCTGAAACAGCAGAGGATCACGCCGGGTATGGAATCTCCGTCGCCGTACCACGATATGTGGGGCCGATGA

mRNA sequence

ATGGCGGCGAAGAAATTCTGGAATATGGTTCGAGCAATCGCGTTGATGCTGCGAAAAGAGTTATCAAAAGGCCGAATCATAATGTCCGATCTTAATTTGATGATGAAGAGAGGCAAGCTCGCCGGAAAGGCTATGCTCAATCTGATGCATCTCCACCAGAGCTCCGGTACTCTCAGCAGCCAGACCACCACCGATATAGCTAACTCCATCGCCATTGCTCCACAGGACTACGAGTTCAGTTGCAGTAACAGCCCTGCTTTTCCAGCGCTGCAGATCTACGGAAAGCGTGGTGGCAAGAACCGCCATCGATACAACGACGTAACCACCGTCGGCGCCGTGAAACGAGTACTACAGATGTTAAACCGCGAGGCAGCAACAGCGGATGTGGCGTCGCCGATGGTGAAGTTTGGAAAGAATCCGACGGTTAGAGTAACAGACTCGCCGTTTCCGGTGAAGGACGACGGGGACCACAAGGTGGACGAAGCGGCAGAGGCGTTTATCAAACGGTTTTACAGTAACCTGAAACAGCAGAGGATCACGCCGGGTATGGAATCTCCGTCGCCGTACCACGATATGTGGGGCCGATGA

Coding sequence (CDS)

ATGGCGGCGAAGAAATTCTGGAATATGGTTCGAGCAATCGCGTTGATGCTGCGAAAAGAGTTATCAAAAGGCCGAATCATAATGTCCGATCTTAATTTGATGATGAAGAGAGGCAAGCTCGCCGGAAAGGCTATGCTCAATCTGATGCATCTCCACCAGAGCTCCGGTACTCTCAGCAGCCAGACCACCACCGATATAGCTAACTCCATCGCCATTGCTCCACAGGACTACGAGTTCAGTTGCAGTAACAGCCCTGCTTTTCCAGCGCTGCAGATCTACGGAAAGCGTGGTGGCAAGAACCGCCATCGATACAACGACGTAACCACCGTCGGCGCCGTGAAACGAGTACTACAGATGTTAAACCGCGAGGCAGCAACAGCGGATGTGGCGTCGCCGATGGTGAAGTTTGGAAAGAATCCGACGGTTAGAGTAACAGACTCGCCGTTTCCGGTGAAGGACGACGGGGACCACAAGGTGGACGAAGCGGCAGAGGCGTTTATCAAACGGTTTTACAGTAACCTGAAACAGCAGAGGATCACGCCGGGTATGGAATCTCCGTCGCCGTACCACGATATGTGGGGCCGATGA

Protein sequence

MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSSQTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQMLNREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRITPGMESPSPYHDMWGR

Homology

[Close]

BLAST of CmoCh11G006530.1 vs. ExPASy TrEMBL
Match: A0A6J1EGR3 (uncharacterized protein LOC111434034 OS=Cucurbita moschata OX=3662 GN=LOC111434034 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.4e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS
Sbjct: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML
Sbjct: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120

Query: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180
           NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT
Sbjct: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180

Query: 181 PGMESPSPYHDMWGR 196
           PGMESPSPYHDMWGR
Sbjct: 181 PGMESPSPYHDMWGR 195

[Close]

BLAST of CmoCh11G006530.1 vs. ExPASy TrEMBL
Match: A0A6J1KRJ8 (uncharacterized protein LOC111496990 OS=Cucurbita maxima OX=3661 GN=LOC111496990 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.3e-102
Identity = 192/195 (98.46%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS
Sbjct: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
            TTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML
Sbjct: 61  HTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120

Query: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180
           N EAA ADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT
Sbjct: 121 NSEAAAADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180

Query: 181 PGMESPSPYHDMWGR 196
           PGMESPSPYHDMWGR
Sbjct: 181 PGMESPSPYHDMWGR 195

[Close]

BLAST of CmoCh11G006530.1 vs. ExPASy TrEMBL
Match: A0A6J1H7V6 (uncharacterized protein LOC111461331 OS=Cucurbita moschata OX=3662 GN=LOC111461331 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.4e-85
Identity = 165/196 (84.18%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAI LMLRKELSK RIIMSDL+LMMKRGKLAGKAMLNLMHLHQ SG+LS 
Sbjct: 9   MAAKKFWNMVRAIVLMLRKELSKSRIIMSDLHLMMKRGKLAGKAMLNLMHLHQISGSLSR 68

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QT TDIA+S AIAPQDYEFSCSNSPAFPALQ+YGKRGGK+ H+Y+DVTTV AVKRVL+ML
Sbjct: 69  QTATDIAHSFAIAPQDYEFSCSNSPAFPALQLYGKRGGKHHHKYSDVTTVSAVKRVLEML 128

Query: 121 NREA-ATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRI 180
           N EA +T DVASPMV  G +P VRVTDSPFPVKD+GDHKVDEAAEAFIKRFYSNLKQQRI
Sbjct: 129 NNEATSTTDVASPMVTLGMSPMVRVTDSPFPVKDEGDHKVDEAAEAFIKRFYSNLKQQRI 188

Query: 181 TPGMESPSPYHDMWGR 196
              +ESPSPYH MWGR
Sbjct: 189 KAALESPSPYHRMWGR 204

[Close]

BLAST of CmoCh11G006530.1 vs. ExPASy TrEMBL
Match: A0A6J1JJK2 (uncharacterized protein LOC111485027 OS=Cucurbita maxima OX=3661 GN=LOC111485027 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.6e-85
Identity = 164/196 (83.67%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAI LMLRKELSK RIIM+DL+LMMKRGKLAGKAMLNLMHLHQ SG+LS 
Sbjct: 9   MAAKKFWNMVRAIVLMLRKELSKSRIIMADLHLMMKRGKLAGKAMLNLMHLHQISGSLSR 68

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QT TDIA+S AIAPQDYEFSCSNSPAFPALQ+YGKRGGK+ H+Y+DVTTV AVKRVL+ML
Sbjct: 69  QTATDIAHSFAIAPQDYEFSCSNSPAFPALQLYGKRGGKHHHKYSDVTTVSAVKRVLEML 128

Query: 121 NREA-ATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRI 180
           N EA +T DVASPMV  G +P VRVTDSPFPVKD+GDHKVDEAAEAFIKRFYSNLKQQRI
Sbjct: 129 NNEATSTTDVASPMVTLGMSPMVRVTDSPFPVKDEGDHKVDEAAEAFIKRFYSNLKQQRI 188

Query: 181 TPGMESPSPYHDMWGR 196
              +ESPSPYH MWGR
Sbjct: 189 KAALESPSPYHRMWGR 204

[Close]

BLAST of CmoCh11G006530.1 vs. ExPASy TrEMBL
Match: A0A5D3CIB8 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003010 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.5e-80
Identity = 168/208 (80.77%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAI LMLRKELSKGRI+MSDL+LMMKRGKLAGKAM NLMHLHQ+ G LS 
Sbjct: 1   MAAKKFWNMVRAIVLMLRKELSKGRIVMSDLHLMMKRGKLAGKAMFNLMHLHQTPGRLSC 60

Query: 61  QT-TTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKN--RHRYNDVTTVGAVKRVL 120
           +T TTDIA SIAIAPQDYEFSCSNSPAFPALQIYGKR GK+    +YNDVTTV AVKRVL
Sbjct: 61  RTATTDIAQSIAIAPQDYEFSCSNSPAFPALQIYGKRSGKHHQNQKYNDVTTVSAVKRVL 120

Query: 121 QMLNREAATA-------DVA--SPMVKFGKNPTVRVTDSPFPVKDD-GDHKVDEAAEAFI 180
           +MLN EA  A       +VA  SPMVKFG +P VRVTDSPFPVKD+ GDHKVDEAAEAFI
Sbjct: 121 EMLNNEAVPATATAVEVEVASPSPMVKFGMSPMVRVTDSPFPVKDECGDHKVDEAAEAFI 180

Query: 181 KRFYSNLKQQRITPGMESPSPYHDMWGR 196
           KRFYSNLKQQRIT GMESPSPYH MWGR
Sbjct: 181 KRFYSNLKQQRITAGMESPSPYHRMWGR 208

[Close]

BLAST of CmoCh11G006530.1 vs. NCBI nr
Match: XP_022927101.1 (uncharacterized protein LOC111434034 [Cucurbita moschata])

HSP 1 Score: 386.3 bits (991), Expect = 1.5e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS
Sbjct: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML
Sbjct: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120

Query: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180
           NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT
Sbjct: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180

Query: 181 PGMESPSPYHDMWGR 196
           PGMESPSPYHDMWGR
Sbjct: 181 PGMESPSPYHDMWGR 195

[Close]

BLAST of CmoCh11G006530.1 vs. NCBI nr
Match: KAG6587992.1 (hypothetical protein SDJN03_16557, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021886.1 hypothetical protein SDJN02_15614, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 7.5e-103
Identity = 194/195 (99.49%), Postives = 194/195 (99.49%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS
Sbjct: 9   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 68

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML
Sbjct: 69  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 128

Query: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180
           N EAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT
Sbjct: 129 NSEAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 188

Query: 181 PGMESPSPYHDMWGR 196
           PGMESPSPYHDMWGR
Sbjct: 189 PGMESPSPYHDMWGR 203

[Close]

BLAST of CmoCh11G006530.1 vs. NCBI nr
Match: XP_023003360.1 (uncharacterized protein LOC111496990 [Cucurbita maxima])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 192/195 (98.46%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS
Sbjct: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
            TTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML
Sbjct: 61  HTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120

Query: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180
           N EAA ADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT
Sbjct: 121 NSEAAAADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180

Query: 181 PGMESPSPYHDMWGR 196
           PGMESPSPYHDMWGR
Sbjct: 181 PGMESPSPYHDMWGR 195

[Close]

BLAST of CmoCh11G006530.1 vs. NCBI nr
Match: XP_023530378.1 (uncharacterized protein LOC111792972 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 9.2e-101
Identity = 191/195 (97.95%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAIALMLRKELSKGRIIMSDL+LMMKRGKLAGKAMLNLMHLHQSSGTLSS
Sbjct: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLHLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML
Sbjct: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120

Query: 121 NREAATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180
           N EAA ADVASPMVKF KNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT
Sbjct: 121 NSEAAAADVASPMVKFEKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRIT 180

Query: 181 PGMESPSPYHDMWGR 196
           PGMESPSPYHDMWGR
Sbjct: 181 PGMESPSPYHDMWGR 195

[Close]

BLAST of CmoCh11G006530.1 vs. NCBI nr
Match: XP_022960597.1 (uncharacterized protein LOC111461331 [Cucurbita moschata] >KAG7023611.1 hypothetical protein SDJN02_14637, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.3 bits (830), Expect = 7.1e-85
Identity = 165/196 (84.18%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           MAAKKFWNMVRAI LMLRKELSK RIIMSDL+LMMKRGKLAGKAMLNLMHLHQ SG+LS 
Sbjct: 9   MAAKKFWNMVRAIVLMLRKELSKSRIIMSDLHLMMKRGKLAGKAMLNLMHLHQISGSLSR 68

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
           QT TDIA+S AIAPQDYEFSCSNSPAFPALQ+YGKRGGK+ H+Y+DVTTV AVKRVL+ML
Sbjct: 69  QTATDIAHSFAIAPQDYEFSCSNSPAFPALQLYGKRGGKHHHKYSDVTTVSAVKRVLEML 128

Query: 121 NREA-ATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHKVDEAAEAFIKRFYSNLKQQRI 180
           N EA +T DVASPMV  G +P VRVTDSPFPVKD+GDHKVDEAAEAFIKRFYSNLKQQRI
Sbjct: 129 NNEATSTTDVASPMVTLGMSPMVRVTDSPFPVKDEGDHKVDEAAEAFIKRFYSNLKQQRI 188

Query: 181 TPGMESPSPYHDMWGR 196
              +ESPSPYH MWGR
Sbjct: 189 KAALESPSPYHRMWGR 204

[Close]

BLAST of CmoCh11G006530.1 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-18
Identity = 74/203 (36.45%), Postives = 110/203 (54.19%), Query Frame = 0


Query: 1   MAAKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSS 60
           +AAK+ W +VR +  +L+    K + +M DLNLM+KRG    KA+ NL     S+G    
Sbjct: 20  VAAKRLWKVVRIVFCVLKTGTVKNK-LMLDLNLMLKRG---NKAITNLRRRSSSTG---- 79

Query: 61  QTTTDIANSIAIAPQDYEFSCSNSPAFPALQIYGKRGGKNRHRYNDVTTVGAVKRVLQML 120
             + D+++S  +  +DY+       AF + +     GG +     +     AVK+V ++L
Sbjct: 80  --SHDVSSSSRV--RDYD-----PFAFISKRKRRVHGGYDN---EEDAVEAAVKKVFELL 139

Query: 121 NRE-----AATADVASPMVKFGKNPTVRVTDSPFPVKDDGDHK--VDEAAEAFIKRFYSN 180
                   A  +   SP++       +RVTDSPFP+ D GDH   VD+AAE FIK+FY N
Sbjct: 140 GENDKKTVATESARESPLIMSPAVRQLRVTDSPFPLDDGGDHDHVVDKAAEEFIKKFYKN 199

Query: 181 LK-QQRITPGMESPSPYHDMWGR 196
           LK Q+++T  +E  SPYHD W R
Sbjct: 200 LKLQKKMTNALE--SPYHDGWVR 200

[Close]

BLAST of CmoCh11G006530.1 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17
Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 0


Query: 3   AKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSSQT 62
           +KK WN+VR +  M+RK +SK ++I +D N  +KRGK       NLM  HQ     +  T
Sbjct: 8   SKKLWNIVRFLLYMIRKGVSKNKLI-ADFNATLKRGK-------NLM-FHQRRRVHAGST 67

Query: 63  TTDIAN---SIAIAPQDYEFSCSNSP--AFPALQIYGKRGGKNRHRYNDVTT-------V 122
            +   N   + A + Q+YEFSCSN+P  +FP   +   R   + + +    T       V
Sbjct: 68  ASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNLFTCGQTPQTLDDDV 127

Query: 123 GAVKRVLQMLNREAATADVA--------SPMVK-FGKNPTV---RVTDSPFPVK----DD 179
            A + VL++LN      +V         SP    FG+ P V   RVTDSPFP+     D 
Sbjct: 128 AAARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPLVRPLRVTDSPFPLTPENGDV 187

[Close]

BLAST of CmoCh11G006530.1 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.2e-12
Identity = 69/212 (32.55%), Postives = 106/212 (50.00%), Query Frame = 0


Query: 3   AKKFWNMVRAIALMLRKELSKGRIIMSDLNLMMKRGKLAGKAMLNLMHLHQSSGTLSSQT 62
           +KK  N+VR +  ML K +SK + +++D N  +KRGK       NLM  H       S  
Sbjct: 8   SKKLGNIVRFVLYMLHKGISKQK-LLADFNATLKRGK-------NLM-FHNRRRVPGS-- 67

Query: 63  TTDIANSIAIAPQ-DYEFSCSNSP--AFPALQIYGKRGGKNRHRYNDVTTVGAV------ 122
                 ++A  PQ +YEFSCS++P   FP    +     K +  +N + + G        
Sbjct: 68  ------AVASHPQNEYEFSCSDTPNYTFP----FNMAAFKKKSHHNSLFSCGQAPPTLDD 127

Query: 123 -----KRVLQMLNR---------------EAATADVASPMVKFGKNPT----VRVTDSPF 179
                + VL++LN                EA TA ++  +  FG++ +    +RVTDSPF
Sbjct: 128 DTSVSRAVLELLNSGGDHDQGSNTPAFSIEALTA-LSPYLPGFGRSTSSVRPLRVTDSPF 187

The following BLAST results are available for this feature:

BLAST of CmoCh11G006530.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G006530.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGR3	7.4e-104	100.00	uncharacterized protein LOC111434034 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1KRJ8	5.3e-102	98.46	uncharacterized protein LOC111496990 OS=Cucurbita maxima OX=3661 GN=LOC111496990...	[more]
A0A6J1H7V6	3.4e-85	84.18	uncharacterized protein LOC111461331 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JJK2	7.6e-85	83.67	uncharacterized protein LOC111485027 OS=Cucurbita maxima OX=3661 GN=LOC111485027...	[more]
A0A5D3CIB8	2.5e-80	80.77	DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CmoCh11G006530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927101.1	1.5e-103	100.00	uncharacterized protein LOC111434034 [Cucurbita moschata]	[more]
KAG6587992.1	7.5e-103	99.49	hypothetical protein SDJN03_16557, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023003360.1	1.1e-101	98.46	uncharacterized protein LOC111496990 [Cucurbita maxima]	[more]
XP_023530378.1	9.2e-101	97.95	uncharacterized protein LOC111792972 [Cucurbita pepo subsp. pepo]	[more]
XP_022960597.1	7.1e-85	84.18	uncharacterized protein LOC111461331 [Cucurbita moschata] >KAG7023611.1 hypothet...	[more]

BLAST of CmoCh11G006530.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29110.1	2.1e-18	36.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT1G52140.1	3.0e-17	36.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G16330.1	2.2e-12	32.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 158..193 e-value: 1.4E-7 score: 30.9
None	No IPR available	PANTHER	PTHR33265:SF26	AVR9/CF-9 RAPIDLY ELICITED PROTEIN	coord: 3..190
None	No IPR available	PANTHER	PTHR33265	AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED	coord: 3..190

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh11G006530	CmoCh11G006530	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G006530.1:exon:3803	CmoCh11G006530.1:exon:3803	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G006530.1:cds	CmoCh11G006530.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh11G006530.1	CmoCh11G006530.1-protein	polypeptide