CmoCh10G002510.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G002510.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein CONSTANS-LIKE 6
Location	Cmo_Chr10: 1114572 .. 1116256 (-)
Sequence length	1505
RNA-Seq Expression	CmoCh10G002510.1
Synteny	CmoCh10G002510.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGACAAACCCCACTTGGGCTATGCTGCGAAGCGAGAGGAAGGCAGCGCCGGAGGCTGCGGCGGCGATGATGGCAGGGAGGACGGCGCGTGTGTGCGATGCTTGTTTATGCAAAAGGGCGCATTGGTTTTGTGCGGCGGACGATGCTTTCCTTTGTCAAGCTTGTGATGTGTCGGTCCATTCAGCTAATCAGCTTGCGAGAAGACACGACCGAATTCGGTTGGAAACGGCGTCGTTGAAGTCCACTCATCAAGCTCAAGCTCAATCTCAACCTCATCTCCCTCCATGGCTTAAGGGCTTTACTCGTAAGGCTAGAACTCCACGACCCAACAAACAAATTTCTTCAACAAAAGCTTCCGTTTTTTCTCTTGTTCCTGAGATTAGCAATGATGAAGGGTTCTCAATTGACGACAACGAAGACGAACACCGCCAATTTCATCACCACCACCATCATCAACAAGTTCCCGTGTTTGATCCATTATTCGACGACGAAAAATTCTCACTAACCCACGAATTGGACGATTTTGGAGATGGGTTTTTGCCGTCGGAGGTCGATCTTGCGGAATTCGTAGCGGACGTAGAGAATTTGTTAGTAAGACAAGAACAAGAACAAGAACAAAAACAAAAACAAGAACACGATCGAACTACAATACTTAAGGTCAAAGATGAAAAAGAAGAAGAAGAAGAATTAGTACAAGATTGGAATTTTAAAGGGGAGGAAATCGAAGAGGAAGAGATCAATAAGGTGGAGGATGAAGTGAAAGCATTTGAGCAAGAACTAAAGGTGAAGAAGAAGATCAAGAAGAAGAACATATTCTTGAGGCTAAATTACGATGCGATTATTACTGCTTGGGACACTCAATCTTCTCCATATACTACAGGAGATCGGCCGGAATACGACCTCGATGATTGTTGGGTAAAATTCTATCAACTTTCCGTCTTCAAAATTCATTCAAATACACGAAAACAAAGACGTTTCATAACCCTGATTCGATCAATGCGATCGAGTTTAGGTACTAAAAACGTAAACTTTTCATTGAACCCACAAATTTATAGCAATTGGGTGTACTCATAAACCCTAAATTGATGAGTGCAGGAGGAGGAATGGGGTTTGCATGAAAATGGAGAGAGAGGAGGATGGAGAAACGACGGGGAAAGGGAGGCAAGAGTGTCGAGGTACAGAGAGAAGCGAAGAACACGGCTGTTTTCGAAGAAAATAAGGTACCAAGTGAGGAAGCTCAACGCTGAGAAGAGACCGAGAATGAAAGGTCGGTTTGTGAAGAGAACAGCAACACCATTGTGTTAATCTTATTTGTGGTCTCCATCTGTGGAAGCTTCTTTGGTTTGGTTCCTGCAAAGTTTTTGGAAGCTTTGGATTTTAGGGTATAAGAATGACTGTAACATAATAGCACTTTGATGGAACGAACTTTGTTTAGATTACAACTTCCTTTCTCTTTCTCTTTCTACAACAAGTGAGGGAGTGGCAATATTAAGGACCTCCTCTGCTCTATCTGTTTGTATTTTTATTGATAAACAAAACCTAATACTATGTAATTCTTACAGAGTTGAACCTCCGACCTTGTAGTTAAGGTCCACACACTCTAATCAACTGAGCTATTCCAGCATGTATAATTTTGTAATTATGTTAATTAGGAGTGAATCAGTGGAAATCATTTTTTAGTGG

mRNA sequence

AATTGACAAACCCCACTTGGGCTATGCTGCGAAGCGAGAGGAAGGCAGCGCCGGAGGCTGCGGCGGCGATGATGGCAGGGAGGACGGCGCGTGTGTGCGATGCTTGTTTATGCAAAAGGGCGCATTGGTTTTGTGCGGCGGACGATGCTTTCCTTTGTCAAGCTTGTGATGTGTCGGTCCATTCAGCTAATCAGCTTGCGAGAAGACACGACCGAATTCGGTTGGAAACGGCGTCGTTGAAGTCCACTCATCAAGCTCAAGCTCAATCTCAACCTCATCTCCCTCCATGGCTTAAGGGCTTTACTCGTAAGGCTAGAACTCCACGACCCAACAAACAAATTTCTTCAACAAAAGCTTCCGTTTTTTCTCTTGTTCCTGAGATTAGCAATGATGAAGGGTTCTCAATTGACGACAACGAAGACGAACACCGCCAATTTCATCACCACCACCATCATCAACAAGTTCCCGTGTTTGATCCATTATTCGACGACGAAAAATTCTCACTAACCCACGAATTGGACGATTTTGGAGATGGGTTTTTGCCGTCGGAGGTCGATCTTGCGGAATTCGTAGCGGACGTAGAGAATTTGTTAGTAAGACAAGAACAAGAACAAGAACAAAAACAAAAACAAGAACACGATCGAACTACAATACTTAAGGTCAAAGATGAAAAAGAAGAAGAAGAAGAATTAGTACAAGATTGGAATTTTAAAGGGGAGGAAATCGAAGAGGAAGAGATCAATAAGGTGGAGGATGAAGTGAAAGCATTTGAGCAAGAACTAAAGGTGAAGAAGAAGATCAAGAAGAAGAACATATTCTTGAGGCTAAATTACGATGCGATTATTACTGCTTGGGACACTCAATCTTCTCCATATACTACAGGAGATCGGCCGGAATACGACCTCGATGATTGTTGGGAGGAGGAATGGGGTTTGCATGAAAATGGAGAGAGAGGAGGATGGAGAAACGACGGGGAAAGGGAGGCAAGAGTGTCGAGGTACAGAGAGAAGCGAAGAACACGGCTGTTTTCGAAGAAAATAAGGTACCAAGTGAGGAAGCTCAACGCTGAGAAGAGACCGAGAATGAAAGGTCGGTTTGTGAAGAGAACAGCAACACCATTGTGTTAATCTTATTTGTGGTCTCCATCTGTGGAAGCTTCTTTGGTTTGGTTCCTGCAAAGTTTTTGGAAGCTTTGGATTTTAGGGTATAAGAATGACTGTAACATAATAGCACTTTGATGGAACGAACTTTGTTTAGATTACAACTTCCTTTCTCTTTCTCTTTCTACAACAAGTGAGGGAGTGGCAATATTAAGGACCTCCTCTGCTCTATCTGTTTGTATTTTTATTGATAAACAAAACCTAATACTATGTAATTCTTACAGAGTTGAACCTCCGACCTTGTAGTTAAGGTCCACACACTCTAATCAACTGAGCTATTCCAGCATGTATAATTTTGTAATTATGTTAATTAGGAGTGAATCAGTGGAAATCATTTTTTAGTGG

Coding sequence (CDS)

ATGCTGCGAAGCGAGAGGAAGGCAGCGCCGGAGGCTGCGGCGGCGATGATGGCAGGGAGGACGGCGCGTGTGTGCGATGCTTGTTTATGCAAAAGGGCGCATTGGTTTTGTGCGGCGGACGATGCTTTCCTTTGTCAAGCTTGTGATGTGTCGGTCCATTCAGCTAATCAGCTTGCGAGAAGACACGACCGAATTCGGTTGGAAACGGCGTCGTTGAAGTCCACTCATCAAGCTCAAGCTCAATCTCAACCTCATCTCCCTCCATGGCTTAAGGGCTTTACTCGTAAGGCTAGAACTCCACGACCCAACAAACAAATTTCTTCAACAAAAGCTTCCGTTTTTTCTCTTGTTCCTGAGATTAGCAATGATGAAGGGTTCTCAATTGACGACAACGAAGACGAACACCGCCAATTTCATCACCACCACCATCATCAACAAGTTCCCGTGTTTGATCCATTATTCGACGACGAAAAATTCTCACTAACCCACGAATTGGACGATTTTGGAGATGGGTTTTTGCCGTCGGAGGTCGATCTTGCGGAATTCGTAGCGGACGTAGAGAATTTGTTAGTAAGACAAGAACAAGAACAAGAACAAAAACAAAAACAAGAACACGATCGAACTACAATACTTAAGGTCAAAGATGAAAAAGAAGAAGAAGAAGAATTAGTACAAGATTGGAATTTTAAAGGGGAGGAAATCGAAGAGGAAGAGATCAATAAGGTGGAGGATGAAGTGAAAGCATTTGAGCAAGAACTAAAGGTGAAGAAGAAGATCAAGAAGAAGAACATATTCTTGAGGCTAAATTACGATGCGATTATTACTGCTTGGGACACTCAATCTTCTCCATATACTACAGGAGATCGGCCGGAATACGACCTCGATGATTGTTGGGAGGAGGAATGGGGTTTGCATGAAAATGGAGAGAGAGGAGGATGGAGAAACGACGGGGAAAGGGAGGCAAGAGTGTCGAGGTACAGAGAGAAGCGAAGAACACGGCTGTTTTCGAAGAAAATAAGGTACCAAGTGAGGAAGCTCAACGCTGAGAAGAGACCGAGAATGAAAGGTCGGTTTGTGAAGAGAACAGCAACACCATTGTGTTAA

Protein sequence

MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTATPLC

Homology

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BLAST of CmoCh10G002510.1 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-52
Identity = 166/412 (40.29%), Postives = 232/412 (56.31%), Query Frame = 0


Query: 11  EAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETA 70
           ++ A+ + G+TAR CD+C+ +RA W+CAADDAFLC ACD SVHSAN LARRH+R+RL++A
Sbjct: 3   KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62

Query: 71  SLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISNDEGFSIDD 130
           S      A   S PH   W +GFTRKARTPR  K+  S       LVPE+S ++    + 
Sbjct: 63  SAGKYRHA---SPPHQATWHQGFTRKARTPRGGKK--SHTMVFHDLVPEMSTED--QAES 122

Query: 131 NEDEHRQFHHHHHHQQVPVFDPLFDDE-----------------KFSLTHELDDFG---- 190
            E E +         +VPV + + +++                  F  + E DD      
Sbjct: 123 YEVEEQLIF------EVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESC 182

Query: 191 -DGFLPSEVDLAEFVADVENLLVRQEQE-------------QEQKQKQEHDRTTILKVKD 250
            +G  P++++LA+F ADVE LL   ++E             + +K++ E +     +V D
Sbjct: 183 LNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHD 242

Query: 251 EKEEEE----ELVQDWNF-------KGEEIEEEEINKVEDEVKAFEQELKVKKKIKKKNI 310
           + E +E    E+  D+ +       +GEE E+E++ K   E+   E    +K++ K+K +
Sbjct: 243 QDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKAL 302

Query: 311 FLRLNYDAIITAWDTQSSPYTTGDRPEYDLD-DCWEE----EWGL---HENGERG----- 364
            LRL+Y+++I+ W  Q  P+T     E DLD  C+      E G    H N  RG     
Sbjct: 303 MLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHL 362

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 6.9e-52
Identity = 167/416 (40.14%), Postives = 229/416 (55.05%), Query Frame = 0


Query: 11  EAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETA 70
           ++ A  +  +TAR CD+C+ +RA W+CAADDAFLCQ+CD  VHSAN LARRH+R+RL+TA
Sbjct: 3   KSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62

Query: 71  S---LKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVF-SLVPEISNDEGF 130
           S   +K ++ + A     +  W  GFTRKARTPR + +     +S+F  LVP+I      
Sbjct: 63  SPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGK--KNNSSIFHDLVPDI------ 122

Query: 131 SIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFS----------------LTHELDDFGD 190
           SI+D  D +          QVPV DPL  ++  +                +  E +D  +
Sbjct: 123 SIEDQTDNYEL--EEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAE 182

Query: 191 ----GFLPSEVDLAEFVADVENLLVR-QEQEQEQKQKQEHDRTTILKV-KDEKEEEEELV 250
               GF P++++L EF ADVE LL R  + E    ++     + + K+ KDE EEE E +
Sbjct: 183 SCLNGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEEVEEI 242

Query: 251 Q------------------------DWNFKGEEIEEEEINKVEDEVKAFEQELKVKKKIK 310
           +                        D+    +  EEE +  VE    + E  +KVK++  
Sbjct: 243 KAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVE---SSGECVVKVKEEEH 302

Query: 311 KKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHENGER--------GG 364
           K  + LRLNYD++I+ W  Q  P+++G+ PE D+D      + + ENG          GG
Sbjct: 303 KNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGG 362

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-45
Identity = 161/399 (40.35%), Postives = 213/399 (53.38%), Query Frame = 0


Query: 11  EAAAAMMAGR--TARVCDACLCK-RAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRL 70
           E+  A + G    AR CDAC+ + RA W+C ADDAFLCQ+CD S+HSAN LA+RH+R+RL
Sbjct: 6   ESRTASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65

Query: 71  ETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFS---LVPEISNDE 130
           +++S   T      +      W +GF RKARTPR           + S   LVPE+  DE
Sbjct: 66  QSSSPTET------ADKTTSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELGGDE 125

Query: 131 G---FSIDDNEDEHRQFHHHHHHQQVPVFDPLFD-------------DEKFSLTHE---- 190
               FS    E+          +  VPVFDP  D             DE  + T      
Sbjct: 126 DDGFFSFSSVEETEESL-----NCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELG 185

Query: 191 ------LDDFG-DGFLPSEVDLAEFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEK 250
                 +DD G  GF+P ++DL +   DVE+LL   E+EQ     +E +   ++K ++ K
Sbjct: 186 EVEKAIMDDEGFMGFVPLDMDLEDLTMDVESLL---EEEQLCLGFKEPNDVGVIK-EENK 245

Query: 251 EEEEELVQDWNFKGEEIEEEEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAW 310
              E   +D     +E EEEE  K E+             K +K ++FLRL+Y A+I+AW
Sbjct: 246 VGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAW 305

Query: 311 DTQSSPYTTGDRPEYDL--DDCWEEEWGLHE-----------NGERGGWRNDGEREARVS 364
           D   SP+ TG +PE  L  + C     G +E              R G  +DGEREARV 
Sbjct: 306 DNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVL 365

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 5.4e-28
Identity = 118/360 (32.78%), Postives = 162/360 (45.00%), Query Frame = 0


Query: 23  RVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQAQAQS 82
           R C+ CL K A W+CA+DDAFLC  CD SVHSAN +A +H+R+ L T  + +  +     
Sbjct: 19  RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRG---G 78

Query: 83  QPHLPPWLKGFTRKARTPR------PNKQISSTKASVFSLVPEISNDEGFSIDDNEDEHR 142
                 W  GF RKARTPR      P ++I   +      VPEI  +  F I +      
Sbjct: 79  TTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAN---- 138

Query: 143 QFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGD-GFLPSEVDLAEFVADVENLLVRQEQ 202
                             DD+  SL  E + F + GF  S                    
Sbjct: 139 ------------------DDDMTSLVPEFEGFTEMGFFLS-------------------- 198

Query: 203 EQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE------------INKVE 262
                    H+ T     +   EEE + ++D  + GEE ++ +              K  
Sbjct: 199 --------NHNGTEETTKQFNFEEEADTMEDLYYNGEEEDKTDGAEACPGQYLMSCKKDY 258

Query: 263 DEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPY-TTGDRPEYDLDDCWEEEW 322
           D V    ++ +  +   + N   RLNY+ +I AWD Q SP     +   + L        
Sbjct: 259 DNVITVSEKTEEIEDCYENNARHRLNYENVIAAWDKQESPRDVKNNTSSFQL-----VPP 314

Query: 323 GLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT 363
           G+ E   R       EREARV RYR+KR+ RLF KKIRY+VRK+NA+KRPRMKGRFV+R+
Sbjct: 319 GIEEKRVR------SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10
Identity = 61/157 (38.85%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 208 TTILKVKDEKEEEEELV---QDWNFKGEEIEEEEINKVEDEVKAFEQELKVKKKIKKKNI 267
           T I  V +EK + +++V   +  N K ++ +      +  E K+ E     +  +K+   
Sbjct: 278 TAISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLED--TEETSLKRTGP 337

Query: 268 FLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHENGERGGWRNDGEREARVS 327
            L+L+YD ++ AW  ++SP+      E    +  +    L +    G   + G REA V 
Sbjct: 338 LLKLDYDGVLEAWSDKTSPFP----DEIQGSEAVDVNARLAQIDLFG---DSGMREASVL 397

Query: 328 RYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKR 362
           RY+EKRRTRLFSKKIRYQVRKLNA++RPRMKGRFV+R
Sbjct: 398 RYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy TrEMBL
Match: A0A6J1E0Y5 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC111429816 PE=3 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.4e-202
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR
Sbjct: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60

Query: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120
           RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI
Sbjct: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120

Query: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180
           SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA
Sbjct: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180

Query: 181 EFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEIN 240
           EFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEIN
Sbjct: 181 EFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEIN 240

Query: 241 KVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEE 300
           KVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEE
Sbjct: 241 KVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEE 300

Query: 301 EWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK 360
           EWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK
Sbjct: 301 EWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK 360

Query: 361 RTATPLC 368
           RTATPLC
Sbjct: 361 RTATPLC 367

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy TrEMBL
Match: A0A6J1JGM2 (zinc finger protein CONSTANS-LIKE 16 OS=Cucurbita maxima OX=3661 GN=LOC111484935 PE=3 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.3e-186
Identity = 347/369 (94.04%), Postives = 357/369 (96.75%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           MLRSERKAA EAAA MM GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR
Sbjct: 1   MLRSERKAAAEAAATMMGGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60

Query: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120
           RHDRIRLETASLKSTHQ QAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI
Sbjct: 61  RHDRIRLETASLKSTHQGQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120

Query: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180
           SNDEGFSIDDNEDEHRQF  HHHHQQVPVFDPLFD+EKFSLTHELDDFGDGFLPSEVDLA
Sbjct: 121 SNDEGFSIDDNEDEHRQF--HHHHQQVPVFDPLFDNEKFSLTHELDDFGDGFLPSEVDLA 180

Query: 181 EFVADVENLLVRQEQEQEQKQKQE--HDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE 240
           EFVADVE+LLVRQEQEQEQ+Q+QE  +DRTTI+KVKDE EEEEELVQDWNFKGEEIEEEE
Sbjct: 181 EFVADVESLLVRQEQEQEQEQEQEEQYDRTTIVKVKDE-EEEEELVQDWNFKGEEIEEEE 240

Query: 241 INKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCW 300
           INKVEDEVK FEQELKVKKKIKKKNIFLRLNYDAIITAWDT+SSPYTTGDRPE+DLDDCW
Sbjct: 241 INKVEDEVKVFEQELKVKKKIKKKNIFLRLNYDAIITAWDTRSSPYTTGDRPEFDLDDCW 300

Query: 301 EEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF 360
           EEEWG+HENGE+GGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF
Sbjct: 301 EEEWGVHENGEKGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF 360

Query: 361 VKRTATPLC 368
           VKRT TP C
Sbjct: 361 VKRTPTPSC 366

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy TrEMBL
Match: A0A6J1C2R7 (zinc finger protein CONSTANS-LIKE 16 OS=Momordica charantia OX=3673 GN=LOC111006910 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 2.1e-115
Identity = 250/375 (66.67%), Postives = 284/375 (75.73%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           +LRSE++      +A   GR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLAR
Sbjct: 3   LLRSEKQ------SAAAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLAR 62

Query: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120
           RHDRIRLETA  K        SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI
Sbjct: 63  RHDRIRLETAXFK--------SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEI 122

Query: 121 SN-DEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDL 180
            N D+G  +D NE+E+ QF HHHH  QVPVFDPL ++E F LT EL+DFGDGFLPSEVDL
Sbjct: 123 GNDDDGLLLDFNEEENPQFVHHHH--QVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDL 182

Query: 181 AEFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEEL----VQDWNFKGEEIE 240
           AEFVADVENLL  Q++EQE+          + KVKDE++EE  +       WNFKGEE+E
Sbjct: 183 AEFVADVENLLETQQEEQER---------LLRKVKDEEQEENGVKINGFLGWNFKGEEVE 242

Query: 241 EEEINK----VEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPE 300
           E++ NK    VEDE +   +++K KKK KK NIFLRLNYDA+I AWD QSSPYTTG+RPE
Sbjct: 243 EDQENKMVPMVEDEEELL-KKIKKKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPE 302

Query: 301 YDLDDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKR 360
           +DLD+CW        +G RG W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKR
Sbjct: 303 FDLDECWLGWSWAGASGGRGEWKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKR 347

Query: 361 PRMKGRFVKRTATPL 367
           PRMKGRFVKRTA PL
Sbjct: 363 PRMKGRFVKRTAPPL 347

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy TrEMBL
Match: A0A1S3BWX5 (zinc finger protein CONSTANS-LIKE 16 OS=Cucumis melo OX=3656 GN=LOC103494122 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 9.6e-113
Identity = 258/383 (67.36%), Postives = 286/383 (74.67%), Query Frame = 0


Query: 15  AMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKS 74
           AM  GRTARVCD+CLCKRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLET+S  S
Sbjct: 14  AMTGGRTARVCDSCLCKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETSSFNS 73

Query: 75  THQAQAQSQPHLP--PWLKGFTRKARTPRP-NKQISSTKASVFSLVPEISNDE--GFSID 134
           T         HLP  PWLKGFTRKARTPR  N +ISS+KASVFS+VPEI ND   GFSID
Sbjct: 74  T-------TDHLPPTPWLKGFTRKARTPRSNNNKISSSKASVFSIVPEIGNDNELGFSID 133

Query: 135 DNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVADVENL 194
           +N+DEH QF    H Q+VPVFDPLFDD+K  LTHEL+DFGDGFLPSEVDLAEFVADVENL
Sbjct: 134 ENDDEHHQF--LGHQQEVPVFDPLFDDQKLLLTHELEDFGDGFLPSEVDLAEFVADVENL 193

Query: 195 LVRQEQEQEQKQKQEHD-RTTILKVKDEKEEEEELVQ--------------DWNFKGEEI 254
           L ++E+E++Q   Q+HD  T I+KVKD     EELVQ              DW+FK EEI
Sbjct: 194 LGKEEEEEQQ---QQHDGNTIIVKVKD-----EELVQDCINKNNNHNGFWMDWDFK-EEI 253

Query: 255 EEEEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDL 314
           EEEE    ED     E+ELK+K   KK  I LRLNYDA+ITAWD QSSPYTTG+RP++DL
Sbjct: 254 EEEE----ED-----EEELKIKN--KKNIISLRLNYDAVITAWDAQSSPYTTGNRPQFDL 313

Query: 315 DDCWEEEWGLHENGERG------GWR-------NDGEREARVSRYREKRRTRLFSKKIRY 365
           DDC EE  G+   G R        WR       ++GEREARVSRYREKRRTRLFSKKIRY
Sbjct: 314 DDCLEEWSGICSKGGRNVAVDDQEWRRNYNGIISNGEREARVSRYREKRRTRLFSKKIRY 367

[Close]

BLAST of CmoCh10G002510.1 vs. ExPASy TrEMBL
Match: A0A0A0LSN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023050 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.8e-111
Identity = 250/381 (65.62%), Postives = 279/381 (73.23%), Query Frame = 0


Query: 13  AAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASL 72
           + AM  GRTARVCD+CLCKRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLET+S 
Sbjct: 4   STAMTGGRTARVCDSCLCKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETSSF 63

Query: 73  KSTHQAQAQSQPHLP--PWLKGFTRKARTPRP---NKQISSTKASVFSLVPEISNDE--G 132
            ST         HLP  PWLKGFTRKARTPR    N +ISS+KASVFS+VPEI ND   G
Sbjct: 64  NST--------DHLPPTPWLKGFTRKARTPRSNNNNNKISSSKASVFSIVPEIGNDNELG 123

Query: 133 FSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVAD 192
           FSID+N+DEH QF    H Q+VPVFDPLFDD+K  LT EL+DFGDGFLPSEVDLAEFVAD
Sbjct: 124 FSIDENDDEHHQF--LGHQQEVPVFDPLFDDQKLLLTDELEDFGDGFLPSEVDLAEFVAD 183

Query: 193 VENLLVRQEQEQEQKQKQEHDRTTILKVKDE---------KEEEEELVQDWNFKGEEIEE 252
           VENLL RQ+ E++Q+Q  + +   I+KVKDE                + DW+FK EEIEE
Sbjct: 184 VENLLGRQDDEEQQQQDHDGNTNIIVKVKDEDLVQDCINKNNNHNGYLMDWDFK-EEIEE 243

Query: 253 EEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDD 312
           EE           E+ELK+K   KK  I LRLNYDA+ITAWD QSSPYTTG+RP++DLDD
Sbjct: 244 EE-----------EEELKIKN--KKNIISLRLNYDAVITAWDAQSSPYTTGNRPQFDLDD 303

Query: 313 CWEEEWGLHENGERG---------GWRNDG----EREARVSRYREKRRTRLFSKKIRYQV 365
           CWEE  G+   G R          G  N+G    EREARVSRYREKRRTRLFSKKIRYQV
Sbjct: 304 CWEEWSGVCSKGGRNVVVDDQEWRGRNNNGISNEEREARVSRYREKRRTRLFSKKIRYQV 360

[Close]

BLAST of CmoCh10G002510.1 vs. NCBI nr
Match: XP_022921599.1 (zinc finger protein CONSTANS-LIKE 6 [Cucurbita moschata])

HSP 1 Score: 712.6 bits (1838), Expect = 1.7e-201
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR
Sbjct: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60

Query: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120
           RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI
Sbjct: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120

Query: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180
           SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA
Sbjct: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180

Query: 181 EFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEIN 240
           EFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEIN
Sbjct: 181 EFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEEIN 240

Query: 241 KVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEE 300
           KVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEE
Sbjct: 241 KVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEE 300

Query: 301 EWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK 360
           EWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK
Sbjct: 301 EWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK 360

Query: 361 RTATPLC 368
           RTATPLC
Sbjct: 361 RTATPLC 367

[Close]

BLAST of CmoCh10G002510.1 vs. NCBI nr
Match: KAG6589549.1 (Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699.9 bits (1805), Expect = 1.2e-197
Identity = 362/369 (98.10%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR
Sbjct: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60

Query: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120
           RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI
Sbjct: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120

Query: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180
           SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA
Sbjct: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180

Query: 181 EFVADVENLLVR--QEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE 240
           EFVADVENLLVR  QEQEQEQ+Q+QEH+RTTILKVKDEKEEEEELVQDWNFKGEEIEEEE
Sbjct: 181 EFVADVENLLVRQEQEQEQEQEQEQEHNRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE 240

Query: 241 INKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCW 300
           +NKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPE+DLDDCW
Sbjct: 241 MNKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEFDLDDCW 300

Query: 301 EEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF 360
           EEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF
Sbjct: 301 EEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF 360

Query: 361 VKRTATPLC 368
           VKRTATPLC
Sbjct: 361 VKRTATPLC 369

[Close]

BLAST of CmoCh10G002510.1 vs. NCBI nr
Match: KAG7023236.1 (Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 692.2 bits (1785), Expect = 2.4e-195
Identity = 362/373 (97.05%), Postives = 365/373 (97.86%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR
Sbjct: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60

Query: 61  RHDRIRLETASLKSTH----QAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSL 120
           RHDRIRLETASLKSTH    QAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSL
Sbjct: 61  RHDRIRLETASLKSTHQAQAQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSL 120

Query: 121 VPEISNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSE 180
           VPEISNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSE
Sbjct: 121 VPEISNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSE 180

Query: 181 VDLAEFVADVENLLVR--QEQEQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEI 240
           VDLAEFVADVENLLVR  Q Q QEQ+Q+QEHDRTTILKVKDEKEEEEELVQDWNFKGEEI
Sbjct: 181 VDLAEFVADVENLLVRQGQGQGQEQEQEQEHDRTTILKVKDEKEEEEELVQDWNFKGEEI 240

Query: 241 EEEEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDL 300
           EEEE+NKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDL
Sbjct: 241 EEEEMNKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDL 300

Query: 301 DDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRM 360
           DDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRM
Sbjct: 301 DDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRM 360

Query: 361 KGRFVKRTATPLC 368
           KGRFVKRTATPLC
Sbjct: 361 KGRFVKRTATPLC 373

[Close]

BLAST of CmoCh10G002510.1 vs. NCBI nr
Match: XP_022987355.1 (zinc finger protein CONSTANS-LIKE 16 [Cucurbita maxima])

HSP 1 Score: 662.1 bits (1707), Expect = 2.7e-186
Identity = 347/369 (94.04%), Postives = 357/369 (96.75%), Query Frame = 0


Query: 1   MLRSERKAAPEAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60
           MLRSERKAA EAAA MM GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR
Sbjct: 1   MLRSERKAAAEAAATMMGGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLAR 60

Query: 61  RHDRIRLETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120
           RHDRIRLETASLKSTHQ QAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI
Sbjct: 61  RHDRIRLETASLKSTHQGQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEI 120

Query: 121 SNDEGFSIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLA 180
           SNDEGFSIDDNEDEHRQF  HHHHQQVPVFDPLFD+EKFSLTHELDDFGDGFLPSEVDLA
Sbjct: 121 SNDEGFSIDDNEDEHRQF--HHHHQQVPVFDPLFDNEKFSLTHELDDFGDGFLPSEVDLA 180

Query: 181 EFVADVENLLVRQEQEQEQKQKQE--HDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE 240
           EFVADVE+LLVRQEQEQEQ+Q+QE  +DRTTI+KVKDE EEEEELVQDWNFKGEEIEEEE
Sbjct: 181 EFVADVESLLVRQEQEQEQEQEQEEQYDRTTIVKVKDE-EEEEELVQDWNFKGEEIEEEE 240

Query: 241 INKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCW 300
           INKVEDEVK FEQELKVKKKIKKKNIFLRLNYDAIITAWDT+SSPYTTGDRPE+DLDDCW
Sbjct: 241 INKVEDEVKVFEQELKVKKKIKKKNIFLRLNYDAIITAWDTRSSPYTTGDRPEFDLDDCW 300

Query: 301 EEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF 360
           EEEWG+HENGE+GGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF
Sbjct: 301 EEEWGVHENGEKGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRF 360

Query: 361 VKRTATPLC 368
           VKRT TP C
Sbjct: 361 VKRTPTPSC 366

[Close]

BLAST of CmoCh10G002510.1 vs. NCBI nr
Match: XP_023516130.1 (zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 630.9 bits (1626), Expect = 6.7e-177
Identity = 340/375 (90.67%), Postives = 347/375 (92.53%), Query Frame = 0


Query: 1   MLRSERKAAPE---AAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQ 60
           MLRSERKAA E   AAAAMM GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQ
Sbjct: 1   MLRSERKAAAEAAAAAAAMMGGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQ 60

Query: 61  LARRHDRIRLETASLKSTH--QAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFS 120
           LARRHDRIRLET+SLKS H  QAQ+QSQPHLPPWLKGFTRKARTPRPNK ISSTKASVFS
Sbjct: 61  LARRHDRIRLETSSLKSIHQGQAQSQSQPHLPPWLKGFTRKARTPRPNKPISSTKASVFS 120

Query: 121 LVPEISNDEGFSIDDNEDEHRQF--HHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFL 180
           LVPEIS DEGFSIDDNEDEHRQF  HHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFL
Sbjct: 121 LVPEISTDEGFSIDDNEDEHRQFHHHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFL 180

Query: 181 PSEVDLAEFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEK-EEEEELVQDWNFKGE 240
           PSEVDLAEFVA+VENLLV QEQEQE    QE+DRTT+LKVKDEK EEEEELVQDWNFKGE
Sbjct: 181 PSEVDLAEFVANVENLLVGQEQEQE----QEYDRTTMLKVKDEKEEEEEELVQDWNFKGE 240

Query: 241 EIEEEEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEY 300
           EIEEEEINKVEDE         VKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPE+
Sbjct: 241 EIEEEEINKVEDE---------VKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEF 300

Query: 301 DLDDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRP 360
           +LDDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRP
Sbjct: 301 ELDDCWEEEWGLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRP 360

Query: 361 RMKGRFVKRTATPLC 368
           RMKGRFVKRTATP C
Sbjct: 361 RMKGRFVKRTATPSC 362

[Close]

BLAST of CmoCh10G002510.1 vs. TAIR 10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-53
Identity = 166/412 (40.29%), Postives = 232/412 (56.31%), Query Frame = 0


Query: 11  EAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETA 70
           ++ A+ + G+TAR CD+C+ +RA W+CAADDAFLC ACD SVHSAN LARRH+R+RL++A
Sbjct: 3   KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62

Query: 71  SLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISNDEGFSIDD 130
           S      A   S PH   W +GFTRKARTPR  K+  S       LVPE+S ++    + 
Sbjct: 63  SAGKYRHA---SPPHQATWHQGFTRKARTPRGGKK--SHTMVFHDLVPEMSTED--QAES 122

Query: 131 NEDEHRQFHHHHHHQQVPVFDPLFDDE-----------------KFSLTHELDDFG---- 190
            E E +         +VPV + + +++                  F  + E DD      
Sbjct: 123 YEVEEQLIF------EVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESC 182

Query: 191 -DGFLPSEVDLAEFVADVENLLVRQEQE-------------QEQKQKQEHDRTTILKVKD 250
            +G  P++++LA+F ADVE LL   ++E             + +K++ E +     +V D
Sbjct: 183 LNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHD 242

Query: 251 EKEEEE----ELVQDWNF-------KGEEIEEEEINKVEDEVKAFEQELKVKKKIKKKNI 310
           + E +E    E+  D+ +       +GEE E+E++ K   E+   E    +K++ K+K +
Sbjct: 243 QDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKAL 302

Query: 311 FLRLNYDAIITAWDTQSSPYTTGDRPEYDLD-DCWEE----EWGL---HENGERG----- 364
            LRL+Y+++I+ W  Q  P+T     E DLD  C+      E G    H N  RG     
Sbjct: 303 MLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHL 362

[Close]

BLAST of CmoCh10G002510.1 vs. TAIR 10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 206.1 bits (523), Expect = 4.9e-53
Identity = 167/416 (40.14%), Postives = 229/416 (55.05%), Query Frame = 0


Query: 11  EAAAAMMAGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETA 70
           ++ A  +  +TAR CD+C+ +RA W+CAADDAFLCQ+CD  VHSAN LARRH+R+RL+TA
Sbjct: 3   KSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62

Query: 71  S---LKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVF-SLVPEISNDEGF 130
           S   +K ++ + A     +  W  GFTRKARTPR + +     +S+F  LVP+I      
Sbjct: 63  SPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGK--KNNSSIFHDLVPDI------ 122

Query: 131 SIDDNEDEHRQFHHHHHHQQVPVFDPLFDDEKFS----------------LTHELDDFGD 190
           SI+D  D +          QVPV DPL  ++  +                +  E +D  +
Sbjct: 123 SIEDQTDNYEL--EEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAE 182

Query: 191 ----GFLPSEVDLAEFVADVENLLVR-QEQEQEQKQKQEHDRTTILKV-KDEKEEEEELV 250
               GF P++++L EF ADVE LL R  + E    ++     + + K+ KDE EEE E +
Sbjct: 183 SCLNGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEEVEEI 242

Query: 251 Q------------------------DWNFKGEEIEEEEINKVEDEVKAFEQELKVKKKIK 310
           +                        D+    +  EEE +  VE    + E  +KVK++  
Sbjct: 243 KAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVE---SSGECVVKVKEEEH 302

Query: 311 KKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHENGER--------GG 364
           K  + LRLNYD++I+ W  Q  P+++G+ PE D+D      + + ENG          GG
Sbjct: 303 KNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGG 362

[Close]

BLAST of CmoCh10G002510.1 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 185.3 bits (469), Expect = 9.0e-47
Identity = 161/399 (40.35%), Postives = 213/399 (53.38%), Query Frame = 0


Query: 11  EAAAAMMAGR--TARVCDACLCK-RAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRL 70
           E+  A + G    AR CDAC+ + RA W+C ADDAFLCQ+CD S+HSAN LA+RH+R+RL
Sbjct: 6   ESRTASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65

Query: 71  ETASLKSTHQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFS---LVPEISNDE 130
           +++S   T      +      W +GF RKARTPR           + S   LVPE+  DE
Sbjct: 66  QSSSPTET------ADKTTSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELGGDE 125

Query: 131 G---FSIDDNEDEHRQFHHHHHHQQVPVFDPLFD-------------DEKFSLTHE---- 190
               FS    E+          +  VPVFDP  D             DE  + T      
Sbjct: 126 DDGFFSFSSVEETEESL-----NCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELG 185

Query: 191 ------LDDFG-DGFLPSEVDLAEFVADVENLLVRQEQEQEQKQKQEHDRTTILKVKDEK 250
                 +DD G  GF+P ++DL +   DVE+LL   E+EQ     +E +   ++K ++ K
Sbjct: 186 EVEKAIMDDEGFMGFVPLDMDLEDLTMDVESLL---EEEQLCLGFKEPNDVGVIK-EENK 245

Query: 251 EEEEELVQDWNFKGEEIEEEEINKVEDEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAW 310
              E   +D     +E EEEE  K E+             K +K ++FLRL+Y A+I+AW
Sbjct: 246 VGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAW 305

Query: 311 DTQSSPYTTGDRPEYDL--DDCWEEEWGLHE-----------NGERGGWRNDGEREARVS 364
           D   SP+ TG +PE  L  + C     G +E              R G  +DGEREARV 
Sbjct: 306 DNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVL 365

[Close]

BLAST of CmoCh10G002510.1 vs. TAIR 10
Match: AT1G49130.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-29
Identity = 118/360 (32.78%), Postives = 162/360 (45.00%), Query Frame = 0


Query: 23  RVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQAQAQS 82
           R C+ CL K A W+CA+DDAFLC  CD SVHSAN +A +H+R+ L T  + +  +     
Sbjct: 26  RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRG---G 85

Query: 83  QPHLPPWLKGFTRKARTPR------PNKQISSTKASVFSLVPEISNDEGFSIDDNEDEHR 142
                 W  GF RKARTPR      P ++I   +      VPEI  +  F I +      
Sbjct: 86  TTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAN---- 145

Query: 143 QFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGD-GFLPSEVDLAEFVADVENLLVRQEQ 202
                             DD+  SL  E + F + GF  S                    
Sbjct: 146 ------------------DDDMTSLVPEFEGFTEMGFFLS-------------------- 205

Query: 203 EQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE------------INKVE 262
                    H+ T     +   EEE + ++D  + GEE ++ +              K  
Sbjct: 206 --------NHNGTEETTKQFNFEEEADTMEDLYYNGEEEDKTDGAEACPGQYLMSCKKDY 265

Query: 263 DEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPY-TTGDRPEYDLDDCWEEEW 322
           D V    ++ +  +   + N   RLNY+ +I AWD Q SP     +   + L        
Sbjct: 266 DNVITVSEKTEEIEDCYENNARHRLNYENVIAAWDKQESPRDVKNNTSSFQL-----VPP 321

Query: 323 GLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT 363
           G+ E   R       EREARV RYR+KR+ RLF KKIRY+VRK+NA+KRPRMKGRFV+R+
Sbjct: 326 GIEEKRVR------SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321

[Close]

BLAST of CmoCh10G002510.1 vs. TAIR 10
Match: AT1G49130.2 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-29
Identity = 118/360 (32.78%), Postives = 162/360 (45.00%), Query Frame = 0


Query: 23  RVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQAQAQS 82
           R C+ CL K A W+CA+DDAFLC  CD SVHSAN +A +H+R+ L T  + +  +     
Sbjct: 19  RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRG---G 78

Query: 83  QPHLPPWLKGFTRKARTPR------PNKQISSTKASVFSLVPEISNDEGFSIDDNEDEHR 142
                 W  GF RKARTPR      P ++I   +      VPEI  +  F I +      
Sbjct: 79  TTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAN---- 138

Query: 143 QFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGD-GFLPSEVDLAEFVADVENLLVRQEQ 202
                             DD+  SL  E + F + GF  S                    
Sbjct: 139 ------------------DDDMTSLVPEFEGFTEMGFFLS-------------------- 198

Query: 203 EQEQKQKQEHDRTTILKVKDEKEEEEELVQDWNFKGEEIEEEE------------INKVE 262
                    H+ T     +   EEE + ++D  + GEE ++ +              K  
Sbjct: 199 --------NHNGTEETTKQFNFEEEADTMEDLYYNGEEEDKTDGAEACPGQYLMSCKKDY 258

Query: 263 DEVKAFEQELKVKKKIKKKNIFLRLNYDAIITAWDTQSSPY-TTGDRPEYDLDDCWEEEW 322
           D V    ++ +  +   + N   RLNY+ +I AWD Q SP     +   + L        
Sbjct: 259 DNVITVSEKTEEIEDCYENNARHRLNYENVIAAWDKQESPRDVKNNTSSFQL-----VPP 314

Query: 323 GLHENGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT 363
           G+ E   R       EREARV RYR+KR+ RLF KKIRY+VRK+NA+KRPRMKGRFV+R+
Sbjct: 319 GIEEKRVR------SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314

The following BLAST results are available for this feature:

BLAST of CmoCh10G002510.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG76	2.4e-52	40.29	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q8RWD0	6.9e-52	40.14	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9C9A9	1.3e-45	40.35	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q9M9B3	5.4e-28	32.78	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]
Q9LU68	2.3e-10	38.85	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]

BLAST of CmoCh10G002510.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0Y5	8.4e-202	100.00	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC11142981...	[more]
A0A6J1JGM2	1.3e-186	94.04	zinc finger protein CONSTANS-LIKE 16 OS=Cucurbita maxima OX=3661 GN=LOC111484935...	[more]
A0A6J1C2R7	2.1e-115	66.67	zinc finger protein CONSTANS-LIKE 16 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A1S3BWX5	9.6e-113	67.36	zinc finger protein CONSTANS-LIKE 16 OS=Cucumis melo OX=3656 GN=LOC103494122 PE=...	[more]
A0A0A0LSN3	1.8e-111	65.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023050 PE=3 SV=1	[more]

BLAST of CmoCh10G002510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921599.1	1.7e-201	100.00	zinc finger protein CONSTANS-LIKE 6 [Cucurbita moschata]	[more]
KAG6589549.1	1.2e-197	98.10	Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sor...	[more]
KAG7023236.1	2.4e-195	97.05	Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022987355.1	2.7e-186	94.04	zinc finger protein CONSTANS-LIKE 16 [Cucurbita maxima]	[more]
XP_023516130.1	6.7e-177	90.67	zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh10G002510.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68520.1	1.7e-53	40.29	B-box type zinc finger protein with CCT domain	[more]
AT1G25440.1	4.9e-53	40.14	B-box type zinc finger protein with CCT domain	[more]
AT1G73870.1	9.0e-47	40.35	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.1	3.8e-29	32.78	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.2	3.8e-29	32.78	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 217..259
None	No IPR available	COILS	Coil	Coil	coord: 183..206
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 12..363
None	No IPR available	PANTHER	PTHR31874:SF43	ZINC FINGER PROTEIN CONSTANS-LIKE 6	coord: 12..363
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 24..67 e-value: 2.51849E-16 score: 70.0191
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 20..67 e-value: 1.2E-8 score: 44.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 22..65 e-value: 8.4E-8 score: 32.2
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 20..67 score: 10.693852
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 319..361 e-value: 1.4E-17 score: 63.5
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 319..361 score: 16.042917

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh10G002510	CmoCh10G002510	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G002510.1:exon:7556	CmoCh10G002510.1:exon:7556	exon
CmoCh10G002510.1:exon:7555	CmoCh10G002510.1:exon:7555	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G002510.1:three_prime_utr	CmoCh10G002510.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G002510.1:cds	CmoCh10G002510.1:cds_2	CDS
CmoCh10G002510.1:cds	CmoCh10G002510.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G002510.1:five_prime_utr	CmoCh10G002510.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh10G002510.1	CmoCh10G002510.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding