CmoCh10G002470.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G002470.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr10: 1098387 .. 1101390 (-)
Sequence length537
RNA-Seq ExpressionCmoCh10G002470.1
SyntenyCmoCh10G002470.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGAACTTGGAAGAAAAAATTTGGATCATTGGCTGAATTGATACATGAATCTTGCACTTCACTTCAGCTGCAGAAGAGAGAAGGAAACAATGAAGCCTTGAGGAATCCGTTGCTCCATTGTTCCTGTTCTAACGAGAAAATGAGTGATTCACAGGGAAAAATAGATCACACCCATTTTGGCTTGAACTTGAAGCAAATGACTGAGTGCTTCTTATAAGTTACCCAGCAGGCACAGTTTTGAAACCAGCTTTCATTGGAAAATGGCACGGTCGACTTCGGCAGGTATCGGGTCTGGGGTTGGTGGTACGTTTTCCACATCGTTCAACCTGGTACGGCCCGAAGTGAGGAGGTTCAACAGAGTTATGGATTGGACTTAGTTTAACTCTTTCATGGCAAGGGTAGAAGAAAGACAGGTCATTTCTGATTTGTGAAGAATCCTAGACTGAACAGTACTATAAAAGATAACGATGGATCTAAATATTTAGTAGTATTCTCACAGTTACTTGGAGAACCCGTTACCAGAATCATATAACCAGGGCTGTTCACTCATTAAAGCGGTACGTGAGTTGGGTAGCACCTAATGTAATATCTTAAGCTACGAAACAACATGCTTTAAGGGAAAGAATAAGGTACCTGAAATATGCAATTGCAATAAGAACACTCCATCTGTTCACAACTTGGATATACTCTCCCAACCTAGTTCAGAGGATCATCGGTGCTTTCCGAGTCGGAAAAATCAAAATCTTTATCCTCTTCGAACTCACTGTCTTCATCATTGCTATCTTCATCACTGTCATCGTCTGAAATCGCAGACAAAGATGCTTCCTCGTCCTACAGATCATAACACATATTTTGACTTCAAGCTTCTATTCAATTTTTATACAGGGAACAGAGGAAATAGCAGTCAGAAACTCACTTGGAAAGATTCTGAGACAAGTCCATCCTGAGACGGCCAGTTATTCTCATCATCTGAATCTTCAGTGACACCCTATGATTGCCAATTAACAATTATCTCAAACAAAGAATCGGGCGATCCGTGACAATATCCATTTTCTGTGGTGGGGTTGGTATAGGGATGTGATATCCCACATTGGTTGGGAAAGAGAACGAAACACCCTTTACAAGCATGTGAAAACCTTTCCTTAGCGGATGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGCGGTGGGTTTGGGCCGTTATAGGGGAGCTAAGGCCACCCCTTCCCACTCGAACCCGACAATCCCACATATGCAGAGAACTCATACGAGACGCTCCATAGTTTCTATCCTATGTAACATGGAAGAAAATGTTATGCAGAATTTGAGAAGTTTCAACTTACAATTTCTTTCTTCATTTCCTCTATGTTTTTCTCGAGTTCAGATATATGCTGACTGAGAGCCTACAAAGTTCCAGATAGATGATTCAAGGTGGACATCAGGGATCAAGAACAGTAGATGATTAACACCAAAAAAAAAATGGAGAAAAATGAAACCTCGTGACGCTGCATGGCAACCGAACGCTTCAATGCTTTTGCCTTCGTAAGCAAGTTTCTTGGCCTCAAGGCAATGGGTCGACGATAATTCTTTCCTCGATAGTAAATAAGGGTATATCCTTTTGGAACTCGATCGATCGAAACTAGTATCCCACCACTCTCATACTCTAACAATCTTGCTGTTTCTTCCACAAAAGCAAGTGTCTTTTGCTTGCTAATTAACTTAACGAGCTCCCTATGCTTCCAGTGTAAATGCATGTTTTCAACCACACCATCAAAGACACCACGAATGCCTGGAAAATCATGATTATTGTGTAAGAAAGAATATAGAAATTTAACTACATTTTCAAATTAATTTCACTCACCTATGGGTAGATATGCTGTCATTCGTAACCCAACTTTTCGAAACATGACCCGTTCCTCATCTGTTATTGTTTCCTGATCATCATCAGGGCCAGAAAGAACCATGGACGCTTCAATTCTAGATAGCAATCTTTCTGCTCTAAGTTTCTTAGCTTGGGCCTAACCATCAAGTTATTAAAAGATCGAAGTTGAGTATTCTATGAGAAGATCAATATCAGCAATCAAACATTCTCGGACCAAATAAAAGAAGATAATACTTACAACACCTAGCTTATGTTCAATTCGTCTCACAAGTTTTGCAGTTTTCGCTCTCGAGCTTTCTTCAATCATTTTTTGACGCTCTTCAGCAGATATTTCCCTTCCCCACCTGGACTGAGCCTCATAAAATTCAGCCAAGGTACCTGCAGGTGCCTGTCCATCATCGCTTGATGAAGTAGCCTCAACGACTTTACTTCGAGCTTTCTCTTCCAAGTCTTGAATCTGTTTTGTTAATTCCTGCCGTTCCGCCAACGCTGCAGCTACACTTGTTGGGAGAAAATCCTTCCCACGATATACGACGATAAAATACTTGTTCCTCAATAGTAACATGCCTCCTGTTAAATTCTGCAGCCATGTGAAAATGATATTAGTACAAGCAACAAATAACATGGCAGTTTGGTTCTAAACTTCTGCTTAAAAAGAAACCGCATTCATTACAGAAATATGAAACGCACCCTTATCTCCTCAGCCATGAGTTTATTATTGGTATTCTGTATACCTCTTTTAACAGCAATTTTAGCCACTAGGCTCTTTTCCCAAAGCTTAAGTATAGCAACAGCCAGGCCCTGATGGTTCCTGTTTCTCCCTGCATATACAGATTTGGAAATAGTATGTTCATAACAGAATCATGCAGCAAAATTAAAGGGCATTAGGAAATACCAAGAGCAAAATGACAAGGCAAGGATTTCGTAAGCTTCCTCATCTCAGTCATCTCTGCATTGGTAAGTCCCGACCGCATTCCAGTTGGGAGAAGCCTGAGAGGAGTTTTGTAACCGGGAATACTCGGAGGAAGCTGATCAGCATCAATAGGAAGCACTCCTGTGCCCCACCATTCAACAAAACGAGGACCTAA

mRNA sequence

ATGGTTAGAACTTGGAAGAAAAAATTTGGATCATTGGCTGAATTGATACATGAATCTTGCACTTCACTTCAGCTGCAGAAGAGAGAAGGAAACAATGAAGCCTTGAGGAATCCGTTGCTCCATTGTTCCTGTTCTAACGAGAAAATGAGTGATTCACAGGGAAAAATAGATCACACCCATTTTGGCTTGAACTTGAAGCAAATGACTGATTACTTGGAGAACCCGTTACCAGAATCATATAACCAGGGCTGTTCACTCATTAAAGCGGGAACAGAGGAAATAGCAGTCAGAAACTCACTTGGAAAGATTCTGAGACAAGTCCATCCTGAGACGGCCAGAAATACCAAGAGCAAAATGACAAGGCAAGGATTTCGTAAGCTTCCTCATCTCAGTCATCTCTGCATTGGTAAGTCCCGACCGCATTCCAGTTGGGAGAAGCCTGAGAGGAGTTTTGTAACCGGGAATACTCGGAGGAAGCTGATCAGCATCAATAGGAAGCACTCCTGTGCCCCACCATTCAACAAAACGAGGACCTAA

Coding sequence (CDS)

ATGGTTAGAACTTGGAAGAAAAAATTTGGATCATTGGCTGAATTGATACATGAATCTTGCACTTCACTTCAGCTGCAGAAGAGAGAAGGAAACAATGAAGCCTTGAGGAATCCGTTGCTCCATTGTTCCTGTTCTAACGAGAAAATGAGTGATTCACAGGGAAAAATAGATCACACCCATTTTGGCTTGAACTTGAAGCAAATGACTGATTACTTGGAGAACCCGTTACCAGAATCATATAACCAGGGCTGTTCACTCATTAAAGCGGGAACAGAGGAAATAGCAGTCAGAAACTCACTTGGAAAGATTCTGAGACAAGTCCATCCTGAGACGGCCAGAAATACCAAGAGCAAAATGACAAGGCAAGGATTTCGTAAGCTTCCTCATCTCAGTCATCTCTGCATTGGTAAGTCCCGACCGCATTCCAGTTGGGAGAAGCCTGAGAGGAGTTTTGTAACCGGGAATACTCGGAGGAAGCTGATCAGCATCAATAGGAAGCACTCCTGTGCCCCACCATTCAACAAAACGAGGACCTAA

Protein sequence

MVRTWKKKFGSLAELIHESCTSLQLQKREGNNEALRNPLLHCSCSNEKMSDSQGKIDHTHFGLNLKQMTDYLENPLPESYNQGCSLIKAGTEEIAVRNSLGKILRQVHPETARNTKSKMTRQGFRKLPHLSHLCIGKSRPHSSWEKPERSFVTGNTRRKLISINRKHSCAPPFNKTRT
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh10G002470.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh10G002470.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh10G002470.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh10G002470.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh10G002470CmoCh10G002470gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh10G002470.1:exon:7548CmoCh10G002470.1:exon:7548exon
CmoCh10G002470.1:exon:7549CmoCh10G002470.1:exon:7549exon
CmoCh10G002470.1:exon:7550CmoCh10G002470.1:exon:7550exon
CmoCh10G002470.1:exon:7551CmoCh10G002470.1:exon:7551exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh10G002470.1:cdsCmoCh10G002470.1:cds_4CDS
CmoCh10G002470.1:cdsCmoCh10G002470.1:cds_3CDS
CmoCh10G002470.1:cdsCmoCh10G002470.1:cds_2CDS
CmoCh10G002470.1:cdsCmoCh10G002470.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh10G002470.1CmoCh10G002470.1-proteinpolypeptide