CmoCh08G006770.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G006770.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Isochorismatase domain-containing protein
Location	Cmo_Chr08: 4351239 .. 4353846 (-)
Sequence length	1083
RNA-Seq Expression	CmoCh08G006770.1
Synteny	CmoCh08G006770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGGATAAAATCTCGCAGGCCATCGTTCTTGCTGCCCATTCAATAATCTTTCTTGTTCTGTTGCATTATGGAAATGGCGAATGAATGGAGTCGCACTGCTCTTCTTATCATCGACTTCCAGGTTTTTCTTAATTTTCTTCCTAATTTTCGCTCTTCAAATTCATGCTCAAAATCAACCTTCTTCCAATTCTTGGTTGCAGAGAGATTTCTTTGATGAACGATCTGTGTTTGCTGTACCAGGAGCCTACGCCATACTTCCAAGCGTGTATGATGCCCTCGAATGTGCAAGGAAGCGAGGCATGTTCGTCGTTTGGGTCCGTTTCTTCCTTTGTCTGCTTTAATTTTGTTTTTTGGAATTGTAATCCCTACGAAATCCCTAAAGCATTTCAACAATCAAGAAAATGTTGTTTCTGGTAACTTTTCTGTTATAGATACATTAGTGGTTTCGGATTGCGAGAGATTATTCCCGTTCTTCTGAGATGCTTGTCAAGTTACTCTGATGTATGGAGAAATTGAACCCGAGAGCCCTGATTGTTAGTTGAGAAAATGTTTCATATAACGTTATATGGTAAGATATGAAAACTATTTGAAAGAATCTATAATTTCAACAATCTCCATATACTATCATGTATAATTTCAACAATCGAACTAGAAAAAGGGAAAAATGTTGTTTGTTGATGTGGATTCAGACCGAAGGTAGCTCTGCTCTCCAGTTAAGTAGTCAAAGCAGGCAGACCTAACCTTCAAGATAGGCTCACAAGACAAGTGTGGTGCTATGCCCAATGCTCGGATGCCTAATTTCTTAGATTGCAGAGGTTTTGAGCTTAGTTAGGATAGTTTGCATAACTGGTTAGTGGTATGAGTCCCTTCTATTTATATTTTTTCTCCTTCACTCGCGTGTTAGAGTCGTACGTTGAGTCACCTAGAATTAGAGCGAAGGGACACCTACCTCAACTTAGATGACACCCAGCTTGATAGGCATGGTATTCCTCTTGGCTTGGCCTTGGGAGCCTGGCCAGCGATTCTTCCTTCAATGTGCCCGTGGGCTTTCAAGTCACCCCATGACACTGTTATTTGTGGGTCTTTTATTATGTTTATGTGTTGAGGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTTAAGGAATGATTATGAGTTTATAAGTAAGGAATACATCTTCATTGGTACGAGGCCTTTTCGGGAAGCCCAAAGCAAAGTCATGTGAGCTTATGTTCAAAATGGACAATATCATACCATTGTGGAGATCCGTGATTCATAACATTATGCTGATTGTTGTACAAGTTGATTCTGATTATCACATGTTGCAGCATTGACTTCGTTAGTTAACTCTTATTATCCTTGAGTTTAATTGATTGCTGCTCATTACCCTGTTTGGTACTAATTGAAGAGTAAAGAGAGTGAAATTCGTACTAGCAAATTGGTAATATGCTGAATTAGTCTGTTTTAATCCAAGGTTGTGCGAGAGCATGATCCTGAAGGACGTGACGTTGAACGGTTTCGACGCCATCTCTACGGCAGTGGAAAGCAGAATCCGGTATCAAAGGGAAGCATAGGGGCAGAGTTAATAGAAGGCTTTGAAATAAAAGAAGGAGAATACAAGTTGGTGAAAACCAGGTTCAGTGCCTTCTTTAATACTAACTTGCATTCCCTTCTGCAAGCGACGGGTATTACTGATTTGGTCATCTGTGGTAAGATTCAATATGTACACATCTCCTGTTACCGATCGAATAAGAATTCAAAGAATGGAATAAATGGTTGATGGCTGATACATATTCTAGGTGTTCAAACGCCAAACTGTATCAGACAGACTGTTTTCGATGCTATATCTTTGGATTACCATTCTATCACTGTTCTTTATGATGCAACAGCAGCTGCTTCAGTCCAAATCCATCATGGTATGTGAATTTGCTGATCTAAATCCCTTCTCTTTCCAAGAACAATACATGTCTATGATTTTGCTATTGAAATCTCTTCATATATATGACAATGAAAATGCTGTGAGGAGGTGAAAAAAAAAACAGTGCTGATGAACTTTGTGAGATGAAATCAAATGAATGATGAGGGAATTTCTGAATTTTTTTTTTGTATCAGATAATATCACTGACATGGAGAATGTGGGAGTTGTGGTCGTAAGAGTCGATCAATGGGACGGGTCTGTTGTTGAACCCCTACCACCCCTACCTACCATGGGAAATGTAGTTAGTGCTGGTAAATGATCTCCTACGATAAATAATGGTTCGATCTCAACCCGTGCAAGATTGGATGTATCGAAATAATCAAACACTCCGTATTCCAGGTTATTGTCGTTTTTCTTCTTCTTTTCTTTTGGAGAAAGTATGACCATGGTGATGGAATAAGTGAAGTACGTTTTTCATATTTTCATGTAAGAGTCTAGTTGAGTGATTTGAAGATTTCATGTAGGTTTCAACCCTTCATAAAAGCAACACTTTTTAAATAACTTGTTTAAGCCTAAACATGTCTGCCTTCTTAAAGTAAGTTCCTTTGAAAATACTCTTCCCTCAGAGAGAACATAATTGACCGGTAGTCATGCATGCGCTATATCTGAGCGCTTGAGTTCGAACTCCA

mRNA sequence

ACTGGATAAAATCTCGCAGGCCATCGTTCTTGCTGCCCATTCAATAATCTTTCTTGTTCTGTTGCATTATGGAAATGGCGAATGAATGGAGTCGCACTGCTCTTCTTATCATCGACTTCCAGAGAGATTTCTTTGATGAACGATCTGTGTTTGCTGTACCAGGAGCCTACGCCATACTTCCAAGCGTGTATGATGCCCTCGAATGTGCAAGGAAGCGAGGCATGTTCGTCGTTTGGGTTGTGCGAGAGCATGATCCTGAAGGACGTGACGTTGAACGGTTTCGACGCCATCTCTACGGCAGTGGAAAGCAGAATCCGGTATCAAAGGGAAGCATAGGGGCAGAGTTAATAGAAGGCTTTGAAATAAAAGAAGGAGAATACAAGTTGGTGAAAACCAGGTTCAGTGCCTTCTTTAATACTAACTTGCATTCCCTTCTGCAAGCGACGGGTATTACTGATTTGGTCATCTGTGGTGTTCAAACGCCAAACTGTATCAGACAGACTGTTTTCGATGCTATATCTTTGGATTACCATTCTATCACTGTTCTTTATGATGCAACAGCAGCTGCTTCAGTCCAAATCCATCATGATAATATCACTGACATGGAGAATGTGGGAGTTGTGGTCGTAAGAGTCGATCAATGGGACGGGTCTGTTGTTGAACCCCTACCACCCCTACCTACCATGGGAAATGTAGTTAGTGCTGGTAAATGATCTCCTACGATAAATAATGGTTCGATCTCAACCCGTGCAAGATTGGATGTATCGAAATAATCAAACACTCCGTATTCCAGGTTATTGTCGTTTTTCTTCTTCTTTTCTTTTGGAGAAAGTATGACCATGGTGATGGAATAAGTGAAGTACGTTTTTCATATTTTCATGTAAGAGTCTAGTTGAGTGATTTGAAGATTTCATGTAGGTTTCAACCCTTCATAAAAGCAACACTTTTTAAATAACTTGTTTAAGCCTAAACATGTCTGCCTTCTTAAAGTAAGTTCCTTTGAAAATACTCTTCCCTCAGAGAGAACATAATTGACCGGTAGTCATGCATGCGCTATATCTGAGCGCTTGAGTTCGAACTCCA

Coding sequence (CDS)

ATGGAAATGGCGAATGAATGGAGTCGCACTGCTCTTCTTATCATCGACTTCCAGAGAGATTTCTTTGATGAACGATCTGTGTTTGCTGTACCAGGAGCCTACGCCATACTTCCAAGCGTGTATGATGCCCTCGAATGTGCAAGGAAGCGAGGCATGTTCGTCGTTTGGGTTGTGCGAGAGCATGATCCTGAAGGACGTGACGTTGAACGGTTTCGACGCCATCTCTACGGCAGTGGAAAGCAGAATCCGGTATCAAAGGGAAGCATAGGGGCAGAGTTAATAGAAGGCTTTGAAATAAAAGAAGGAGAATACAAGTTGGTGAAAACCAGGTTCAGTGCCTTCTTTAATACTAACTTGCATTCCCTTCTGCAAGCGACGGGTATTACTGATTTGGTCATCTGTGGTGTTCAAACGCCAAACTGTATCAGACAGACTGTTTTCGATGCTATATCTTTGGATTACCATTCTATCACTGTTCTTTATGATGCAACAGCAGCTGCTTCAGTCCAAATCCATCATGATAATATCACTGACATGGAGAATGTGGGAGTTGTGGTCGTAAGAGTCGATCAATGGGACGGGTCTGTTGTTGAACCCCTACCACCCCTACCTACCATGGGAAATGTAGTTAGTGCTGGTAAATGA

Protein sequence

MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLHSLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMENVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK

Homology

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BLAST of CmoCh08G006770.1 vs. ExPASy Swiss-Prot
Match: Q93Z51 (Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana OX=3702 GN=At3g16190 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-61
Identity = 114/191 (59.69%), Postives = 146/191 (76.44%), Query Frame = 0


Query: 3   MANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 62
           MA  W  TALL+ID Q DF +E +V  V G  +I+P+V   +E AR+RG+ V+WVVREHD
Sbjct: 1   MAERWRNTALLVIDMQNDFIEEGAVTQVKGGKSIVPNVIRVVELARQRGILVIWVVREHD 60

Query: 63  PEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEI-KEGEYKLVKTRFSAFFNTNLHS 122
            +GRDVE FRRH Y S K  PV KG++GAEL++G  I +E +YK+VKTRFSAFF+TNLHS
Sbjct: 61  RQGRDVELFRRHNYSSEKVGPVIKGTVGAELVDGLMINEEDDYKIVKTRFSAFFSTNLHS 120

Query: 123 LLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMEN 182
            LQ +G+T LVI GVQTPNCIRQTVFDA++LDY ++TV+ DATAAA+ +IH  NI DM+N
Sbjct: 121 FLQTSGVTKLVIAGVQTPNCIRQTVFDAVALDYPNVTVITDATAAATPEIHTANILDMKN 180

Query: 183 VGVVVVRVDQW 193
           +GV    + +W
Sbjct: 181 IGVKTPTLHEW 191

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BLAST of CmoCh08G006770.1 vs. ExPASy Swiss-Prot
Match: D0LI56 (Ureidoacrylate amidohydrolase RutB OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) OX=502025 GN=rutB PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.3e-13
Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = 0


Query: 2   EMANEWSRTALLIIDFQRDF-----FDERSVFAVPGAYAILPSVYDALECARKRGMFVVW 61
           ++A + + TA+++ID Q  +     + + + F + GA  ++  +   LE AR  GM VV+
Sbjct: 24  DIALDVAHTAVVVIDMQNAYASPGGYVDLAGFDIAGAAGVIGRIATVLESARTAGMQVVF 83

Query: 62  VVREHDPEGRDVERFRRHLYGSGKQNP---------------------VSKGSIGAELIE 121
           +    DP+         ++   G Q+P                     +++G     L++
Sbjct: 84  LQNGWDPD---------YVEAGGPQSPNWHKSNALKTMRARPELEGKLLARGGWDYALVD 143

Query: 122 GFEIKEGEYKLVKTRFSAFFNTNLHSLLQATGITDLVICGVQTPNCIRQTVFDAISLDYH 165
           G + + G+ ++ K R+SAFF++ L S+L+A GI +LV  G+ T  C+  T+ D   L+Y 
Sbjct: 144 GLKPQPGDIQVHKPRYSAFFHSQLDSVLRARGIRNLVFVGIATNVCVESTLRDGFHLEYF 202

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BLAST of CmoCh08G006770.1 vs. ExPASy Swiss-Prot
Match: B0SW60 (Ureidoacrylate amidohydrolase RutB OS=Caulobacter sp. (strain K31) OX=366602 GN=rutB PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 52/180 (28.89%), Postives = 86/180 (47.78%), Query Frame = 0


Query: 9   RTALLIIDFQRDF-----FDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE--- 68
           +TA+++ID Q  +     + + + F + GA A++  +   L+ AR  GM V++       
Sbjct: 22  KTAVIVIDMQNAYASPGGYLDLAGFDISGAAAVIDKIKGVLDVARGAGMPVIYFQNGWDS 81

Query: 69  -------------HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLV 128
                        H        R R  L G      +++G    +L++  + + G+ +L 
Sbjct: 82  DYVEAGGPGSPNWHKSNALKTMRARPELQG----KLLARGGWDYDLVDALKPEPGDIQLH 141

Query: 129 KTRFSAFFNTNLHSLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAA 168
           KTR+S FFN+ L S+L++ GI  LV  G+ T  C+  T+ D   L+Y   TVL DAT  A
Sbjct: 142 KTRYSGFFNSQLDSVLRSRGIRHLVFVGIATNVCVESTLRDGFFLEYFG-TVLEDATHQA 196

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BLAST of CmoCh08G006770.1 vs. ExPASy Swiss-Prot
Match: D5VGV1 (Ureidoacrylate amidohydrolase RutB OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) OX=509190 GN=rutB PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 52/175 (29.71%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 10  TALLIIDFQRDF-----FDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHDPE 69
           TA+++ID Q  +     + + + F + GA  ++  +   LE AR  GM V++     D +
Sbjct: 29  TAVIVIDMQNAYASPGGYLDLAGFDISGAAKVIHEIKGVLEVARSAGMQVIYFQNGWDDQ 88

Query: 70  GRDV------ERFRRHLYGSGKQNPVSKGSIGA------ELIEGFEIKEGEYKLVKTRFS 129
             +         ++ +   + +  P  +G + A      EL++  + + G+ +L KTR+S
Sbjct: 89  YVEAGGPGSPNWWKSNALKTMRAKPELQGKLLARGQWDYELVDELKPQPGDIQLHKTRYS 148

Query: 130 AFFNTNLHSLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAA 168
            FFN+ L S+L+A GI  LV  G+ T  C+  T+ D   L+Y   TVL DAT  A
Sbjct: 149 GFFNSQLDSVLRARGIRHLVFVGIATNVCVESTLRDGFFLEYFG-TVLEDATHQA 202

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BLAST of CmoCh08G006770.1 vs. ExPASy Swiss-Prot
Match: B9JLT8 (Ureidoacrylate amidohydrolase RutB OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=rutB PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12
Identity = 47/174 (27.01%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 8   SRTALLIIDFQRDFFDERSV-----FAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 67
           S TA++++D Q  +  E        F + GA   + ++   L+ AR  G+ V++     D
Sbjct: 33  SETAVVVVDMQNAYSTEGGYVDLAGFDIAGAKGTIANIKKTLDAARAAGVQVIYFQNGWD 92

Query: 68  PEGRDV------ERFRRHLYGSGKQNP------VSKGSIGAELIEGFEIKEGEYKLVKTR 127
            +  +          + +   + +Q P      ++KG+    +++  + + G+  + KTR
Sbjct: 93  KDYVEAGGPGSPNYHKSNALKTMRQRPELQGQLLAKGTWDYAIVDELQPQPGDILVPKTR 152

Query: 128 FSAFFNTNLHSLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDAT 165
           +S FFNTN+ S+L+A GI +LV  G+ T  C+  ++ DA  L+Y  + +L DAT
Sbjct: 153 YSGFFNTNMDSVLRARGIRNLVFVGIATNVCVESSLRDAFHLEYFGV-MLEDAT 205

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BLAST of CmoCh08G006770.1 vs. ExPASy TrEMBL
Match: A0A6J1HLA4 (probable inactive nicotinamidase At3g16190 OS=Cucurbita moschata OX=3662 GN=LOC111464568 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.6e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60
           MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE
Sbjct: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60

Query: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120
           HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH
Sbjct: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120

Query: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180
           SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME
Sbjct: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180

Query: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 215
           NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK
Sbjct: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 214

[Close]

BLAST of CmoCh08G006770.1 vs. ExPASy TrEMBL
Match: A0A6J1KI74 (probable inactive nicotinamidase At3g16190 OS=Cucurbita maxima OX=3661 GN=LOC111494647 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.0e-114
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60
           MEMANEWS TALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE
Sbjct: 1   MEMANEWSHTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60

Query: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120
           HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH
Sbjct: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120

Query: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180
           SLLQA+GITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME
Sbjct: 121 SLLQASGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180

Query: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 215
           NVGVVVVRVDQWDGSVVEPLPPLP+ GN VSAGK
Sbjct: 181 NVGVVVVRVDQWDGSVVEPLPPLPSTGN-VSAGK 213

[Close]

BLAST of CmoCh08G006770.1 vs. ExPASy TrEMBL
Match: A0A6J1DJ62 (probable inactive nicotinamidase At3g16190 OS=Momordica charantia OX=3673 GN=LOC111021389 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.9e-85
Identity = 154/193 (79.79%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 3   MANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 62
           MAN+W+ TALL+ID QRDFFDERSV A+PGAYAI+PSV DA+E ARKR M +VWVVREHD
Sbjct: 1   MANQWNHTALLVIDMQRDFFDERSVIAIPGAYAIVPSVVDAVEIARKRRMLIVWVVREHD 60

Query: 63  PEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLHSL 122
           PEGRDVERFRRH YGSGKQNPV+KGS GAEL++G EIKEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  PEGRDVERFRRHFYGSGKQNPVAKGSRGAELVDGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 123 LQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMENV 182
           LQ  GI +LV+ GVQTPNCIRQTVFDA++LDYHSIT+L+DATAAA+ + HHDNI DMENV
Sbjct: 121 LQREGINNLVVAGVQTPNCIRQTVFDAVALDYHSITLLHDATAAATPKTHHDNIADMENV 180

Query: 183 GVVVVRVDQWDGS 196
           GVV  RVDQW  S
Sbjct: 181 GVVAKRVDQWGES 193

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BLAST of CmoCh08G006770.1 vs. ExPASy TrEMBL
Match: A0A0A0K7E5 (Isochorismatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447030 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.5e-83
Identity = 150/190 (78.95%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 3   MANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 62
           M ++W RTALL+ID Q DFFDE S FAVPGA  I+PSV +A+E AR RG+F++WVVREHD
Sbjct: 1   MTDQWKRTALLVIDMQTDFFDEHSAFAVPGASTIIPSVSNAIEIARNRGLFIIWVVREHD 60

Query: 63  PEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLHSL 122
            EGRDVERFRRH YG+GK NP  KGS GAEL+EG EIKEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPSVKGSKGAELVEGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 123 LQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMENV 182
           LQ  GITDLV+CGVQTPNCIRQTVFDA++LDYHSIT+LYDATAAA+ +IHHDN TDMENV
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVFDAVALDYHSITLLYDATAAATPKIHHDNTTDMENV 180

Query: 183 GVVVVRVDQW 193
           GVVV RVDQW
Sbjct: 181 GVVVKRVDQW 190

[Close]

BLAST of CmoCh08G006770.1 vs. ExPASy TrEMBL
Match: A0A1S3CP26 (probable inactive nicotinamidase At3g16190 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503139 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.5e-81
Identity = 148/193 (76.68%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 3   MANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 62
           MA++W RTALL+ID QRDF DE SVFAVPGA  I+PSV  A+E AR RG+F++WVVREHD
Sbjct: 1   MADQWKRTALLVIDMQRDFIDEHSVFAVPGASTIIPSVSTAVEIARNRGLFIIWVVREHD 60

Query: 63  PEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLHSL 122
            EGRDVERFRRH YG+GK NP+ KGS GAEL++G EIKEGEYKLVKTRFSAFFNTNL SL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPLVKGSKGAELVQGLEIKEGEYKLVKTRFSAFFNTNLRSL 120

Query: 123 LQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMENV 182
           LQ  GITDLV+CGVQTPNCIRQTVFDA++LDYHSIT+LYDATAAA+ ++HHDNITDM NV
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVFDAVALDYHSITLLYDATAAATPKVHHDNITDMVNV 180

Query: 183 GVVVVRVDQWDGS 196
           GV V RVD+W  S
Sbjct: 181 GVEVKRVDEWGES 193

[Close]

BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: XP_022964605.1 (probable inactive nicotinamidase At3g16190 [Cucurbita moschata])

HSP 1 Score: 434.5 bits (1116), Expect = 5.3e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60
           MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE
Sbjct: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60

Query: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120
           HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH
Sbjct: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120

Query: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180
           SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME
Sbjct: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180

Query: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 215
           NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK
Sbjct: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 214

[Close]

BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: KAG6593471.1 (putative inactive nicotinamidase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025814.1 putative inactive nicotinamidase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 432.2 bits (1110), Expect = 2.6e-117
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60
           MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE
Sbjct: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60

Query: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120
           HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH
Sbjct: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120

Query: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180
           SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME
Sbjct: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180

Query: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 215
           NVGVVVVRVDQWDGSVVEPLPPLPT GNVVSAGK
Sbjct: 181 NVGVVVVRVDQWDGSVVEPLPPLPTTGNVVSAGK 214

[Close]

BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: XP_023515292.1 (probable inactive nicotinamidase At3g16190 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.3 bits (1105), Expect = 1.0e-116
Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60
           MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE
Sbjct: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60

Query: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120
           HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFF+TNLH
Sbjct: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFDTNLH 120

Query: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180
           SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME
Sbjct: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180

Query: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 215
           NVGVVVVRVDQWDGSVVEPLPPLPT GNVVSAGK
Sbjct: 181 NVGVVVVRVDQWDGSVVEPLPPLPTTGNVVSAGK 214

[Close]

BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: XP_023000390.1 (probable inactive nicotinamidase At3g16190 [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 6.1e-114
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 1   MEMANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60
           MEMANEWS TALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE
Sbjct: 1   MEMANEWSHTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVRE 60

Query: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120
           HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH
Sbjct: 61  HDPEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLH 120

Query: 121 SLLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180
           SLLQA+GITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME
Sbjct: 121 SLLQASGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDME 180

Query: 181 NVGVVVVRVDQWDGSVVEPLPPLPTMGNVVSAGK 215
           NVGVVVVRVDQWDGSVVEPLPPLP+ GN VSAGK
Sbjct: 181 NVGVVVVRVDQWDGSVVEPLPPLPSTGN-VSAGK 213

[Close]

BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: XP_022154038.1 (probable inactive nicotinamidase At3g16190 [Momordica charantia])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 154/193 (79.79%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 3   MANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 62
           MAN+W+ TALL+ID QRDFFDERSV A+PGAYAI+PSV DA+E ARKR M +VWVVREHD
Sbjct: 1   MANQWNHTALLVIDMQRDFFDERSVIAIPGAYAIVPSVVDAVEIARKRRMLIVWVVREHD 60

Query: 63  PEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEIKEGEYKLVKTRFSAFFNTNLHSL 122
           PEGRDVERFRRH YGSGKQNPV+KGS GAEL++G EIKEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  PEGRDVERFRRHFYGSGKQNPVAKGSRGAELVDGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 123 LQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMENV 182
           LQ  GI +LV+ GVQTPNCIRQTVFDA++LDYHSIT+L+DATAAA+ + HHDNI DMENV
Sbjct: 121 LQREGINNLVVAGVQTPNCIRQTVFDAVALDYHSITLLHDATAAATPKTHHDNIADMENV 180

Query: 183 GVVVVRVDQWDGS 196
           GVV  RVDQW  S
Sbjct: 181 GVVAKRVDQWGES 193

[Close]

BLAST of CmoCh08G006770.1 vs. TAIR 10
Match: AT3G16190.1 (Isochorismatase family protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62
Identity = 114/191 (59.69%), Postives = 146/191 (76.44%), Query Frame = 0


Query: 3   MANEWSRTALLIIDFQRDFFDERSVFAVPGAYAILPSVYDALECARKRGMFVVWVVREHD 62
           MA  W  TALL+ID Q DF +E +V  V G  +I+P+V   +E AR+RG+ V+WVVREHD
Sbjct: 1   MAERWRNTALLVIDMQNDFIEEGAVTQVKGGKSIVPNVIRVVELARQRGILVIWVVREHD 60

Query: 63  PEGRDVERFRRHLYGSGKQNPVSKGSIGAELIEGFEI-KEGEYKLVKTRFSAFFNTNLHS 122
            +GRDVE FRRH Y S K  PV KG++GAEL++G  I +E +YK+VKTRFSAFF+TNLHS
Sbjct: 61  RQGRDVELFRRHNYSSEKVGPVIKGTVGAELVDGLMINEEDDYKIVKTRFSAFFSTNLHS 120

Query: 123 LLQATGITDLVICGVQTPNCIRQTVFDAISLDYHSITVLYDATAAASVQIHHDNITDMEN 182
            LQ +G+T LVI GVQTPNCIRQTVFDA++LDY ++TV+ DATAAA+ +IH  NI DM+N
Sbjct: 121 FLQTSGVTKLVIAGVQTPNCIRQTVFDAVALDYPNVTVITDATAAATPEIHTANILDMKN 180

Query: 183 VGVVVVRVDQW 193
           +GV    + +W
Sbjct: 181 IGVKTPTLHEW 191

The following BLAST results are available for this feature:

BLAST of CmoCh08G006770.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z51	3.7e-61	59.69	Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
D0LI56	8.3e-13	26.98	Ureidoacrylate amidohydrolase RutB OS=Haliangium ochraceum (strain DSM 14365 / J...	[more]
B0SW60	3.1e-12	28.89	Ureidoacrylate amidohydrolase RutB OS=Caulobacter sp. (strain K31) OX=366602 GN=...	[more]
D5VGV1	3.1e-12	29.71	Ureidoacrylate amidohydrolase RutB OS=Caulobacter segnis (strain ATCC 21756 / DS...	[more]
B9JLT8	5.3e-12	27.01	Ureidoacrylate amidohydrolase RutB OS=Agrobacterium radiobacter (strain K84 / AT...	[more]

BLAST of CmoCh08G006770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLA4	2.6e-118	100.00	probable inactive nicotinamidase At3g16190 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KI74	3.0e-114	97.66	probable inactive nicotinamidase At3g16190 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DJ62	4.9e-85	79.79	probable inactive nicotinamidase At3g16190 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0K7E5	3.5e-83	78.95	Isochorismatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G44...	[more]
A0A1S3CP26	1.5e-81	76.68	probable inactive nicotinamidase At3g16190 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CmoCh08G006770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964605.1	5.3e-118	100.00	probable inactive nicotinamidase At3g16190 [Cucurbita moschata]	[more]
KAG6593471.1	2.6e-117	99.53	putative inactive nicotinamidase, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023515292.1	1.0e-116	99.07	probable inactive nicotinamidase At3g16190 [Cucurbita pepo subsp. pepo]	[more]
XP_023000390.1	6.1e-114	97.66	probable inactive nicotinamidase At3g16190 [Cucurbita maxima]	[more]
XP_022154038.1	1.0e-84	79.79	probable inactive nicotinamidase At3g16190 [Momordica charantia]	[more]

BLAST of CmoCh08G006770.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16190.1	2.6e-62	59.69	Isochorismatase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000868	Isochorismatase-like	PFAM	PF00857	Isochorismatase	coord: 10..190 e-value: 1.4E-37 score: 129.6
IPR036380	Isochorismatase-like superfamily	GENE3D	3.40.50.850		coord: 2..198 e-value: 2.0E-51 score: 176.7
IPR036380	Isochorismatase-like superfamily	SUPERFAMILY	52499	Isochorismatase-like hydrolases	coord: 6..192
None	No IPR available	PANTHER	PTHR47044	OS02G0276400 PROTEIN	coord: 1..193
None	No IPR available	CDD	cd00431	cysteine_hydrolases	coord: 11..180 e-value: 1.28638E-41 score: 136.63

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh08G006770	CmoCh08G006770	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G006770.1:exon:7671	CmoCh08G006770.1:exon:7671	exon
CmoCh08G006770.1:exon:7670	CmoCh08G006770.1:exon:7670	exon
CmoCh08G006770.1:exon:7669	CmoCh08G006770.1:exon:7669	exon
CmoCh08G006770.1:exon:7668	CmoCh08G006770.1:exon:7668	exon
CmoCh08G006770.1:exon:7667	CmoCh08G006770.1:exon:7667	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G006770.1:three_prime_utr	CmoCh08G006770.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G006770.1:cds	CmoCh08G006770.1:cds_5	CDS
CmoCh08G006770.1:cds	CmoCh08G006770.1:cds_4	CDS
CmoCh08G006770.1:cds	CmoCh08G006770.1:cds_3	CDS
CmoCh08G006770.1:cds	CmoCh08G006770.1:cds_2	CDS
CmoCh08G006770.1:cds	CmoCh08G006770.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G006770.1:five_prime_utr	CmoCh08G006770.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh08G006770.1	CmoCh08G006770.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane