CmoCh08G005670.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G005670.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
Location	Cmo_Chr08: 3480000 .. 3486967 (+)
Sequence length	1555
RNA-Seq Expression	CmoCh08G005670.1
Synteny	CmoCh08G005670.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAAAAAAAATCATATTTAAATCCGAAAATGCGGAATTCGGCTGAACAAAAATGGCTATCGCCATATCCGGCGTCTCCCTTCCCTCACTCTTTCACTACAAAAATTCAATTATCGCGCGAAAAAGCCGAATTCGTTCCTTCTCCATTCGATCTTGCAAGGATGTTTCCGGTGAAGGCGACGGCGGGGGCGGCGAGCCTTCGCAGAAGCCGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCTGAGGGCAAGGACTATCTCTATAGGCTTGGCAGCGAGGCAGATAACATGAACATCGCCGTCGGAGCTAGAGCTGGCGTCATCGACGATCTCTTCGCCGGGAACTTCCTTGGCAGAGACTGTAAGTGTCCGATTTATCACTGTTTTTTCCTTTTCATTTTGTGGTTATGGTTTCAGTTTTGTTAATGTTTTCGTTTTCGTGTTGATTTTCTTTGTAGCGGACATTGTGTTTGATTACCGCCAGAAGGTCACTAGATCGTTCGAGCACCTTCAAGGAGACTATTACATTGCCCCTGTTTTCATGGTAATTTTACCCGTTCTACCTCGTTCGGGATCAGTTTTCTTTAGCTATTGACTCTTCTTCTTTGTTCTTCACTATTGTTCTTATTGTTCAGTTGAATTGATATTTTCAGTTAGTGCATCGTCAACCAATCTCGTGCTCTTGATTTTGACATATTTAATTCCAGTACTTGGAATCAAACTGAGCCTGTTAACTTTAGTTAAAATTCGAGTAGAACTTGGGACATTTCCACCTTGGTTAATCGTTGCATCTTTTTTTTTTTTTTGAATCATGAAGGAGATTATTACATTGCTTCTGTTTTCATGGTAATTTTGTCGTTCTACTTCGTTCCACCTCAGTTTGTTTTTGAATTATCGATCCTTTTCTTTGTTCTTCATTATTGTTCAGTTGAATTGATACTTCCTGTAAGTGTAATGTACACTGTTCTTGTGCTCCTTGATTTTGAAATATTTAATTCCTGTACTTGGAATCGCAATTTGCCTTATAACTTTAACATTACAACGAGGAAAGAAATGTGAATTTTACCACCACTGGTTCATGGTCTAGATGCACATGTCTGTAGCATTCAGCTTCTTACTTTTTTTTTCTCTTTTTTATGTTTCTGCTATCTTTTGTGTTATTATTTGAAAATGATCATCTCTCAATAACCTGTCTTTTTACACTTGTTATCATTGGTTTTTTTTTTTTTTTTCTTTTGACAGGATAAAGTTGGTAAGTTCCTTGGATCTTGGTATTGACAAACGGCATGTGGTGAATTACATTTGAAGAAGTAATAAACTTCATTAATATCTGTGTTGCACTCCACTTTATTTGTTGCATTCTTTTTAGATTCGAACAGTAATTCAGTTGCCATTAGATGTAAGGTCATATTTAAATCTTAACAATTTAGTTATATAAATCCAATCAATGACAACTTCACTTTCAGCAATCTATGTATATATTGTTTGTTCATTCTGTATTGTACTCGATATCCTTTTAGAAACTTATGGCTGTGTTTTGGTTCTTTAAGCTCTCATCAAATATATTTATGTAGGCGAACTGCAGAATAACAGTGAATAAATTGCCAGCAGTTGAAATACAGATCTTAATTTGTGATACTTTTTTTGTTGAGTTTTTAGAAAGGGAATTCTTTTAAGCACTTAACCATCAACTACAACTTCTATGACAATTTAATTCACGACAAAATCAACAAAAATCCTCATTGTTGGATAAGAAAGTCATTATTTCATATTAAATGCTATAAATTGGTCATAAGATGGTCTGACCTCTTTCTATCTTCTATAGCTTTCGTCATGATATATTTGAACTCCACTTAAAGGACTAATGAGCCTTTCTGCTGATTGTAAGCTAGTATTTTTGTTGTAATCTGACTCACTGGAAGAGAAATGCAGCATGAAGATGTGATGGTAGTGCTTTTCTCTTTAGGAATTTAAAACGGAGAAGTTTTGCGGGAAGACTCTACCTTCTTTCTTGAAATGAGTACAAACAAGTAGCAGTTAAGTTAACACACGTTAACATGGTCTCTGTTGTTGTGCAGTATGCCACATTGTGAAGAACTTCATAGTTCACCTTCTCAATATCAAAGTTCCCCTTATCTTAGGTATGCATTTATTTAATTTACTGGTTTCAATGCAAAATTCTTTTATAGGAAAATTAATAGAACACAATGTTGAAAACCTATTATTGAAAGGTTCATCAATTTATGTGTCAATGGGAGTCTATTCCATTGCTTTGAATCTTCATCAGTTTTCCCTTTTTAGAATGGAATCAGTGTCTTATCAATCATGACATGGTTAACTTCATGATAGTGCTAGAAACTTTTTTTTTTTCTTTTCTTTTTTTGATTTGTAGGTTAGGCTGGATAAATTTCATCTTGACCAGTTCCACATTTTTCCATAAGAGATGAGTGCGTAGTTGGAAATATAAATGTTTTGTATTACAGGTATTTGGGGAGGAAAGGGTCAAGGAAAGTCATTTCAGACTGAACTTATATTCCAGGCTATGGGAGTGGAACCCGTGATAATGTCTGCTGGAGAATTAGAATCAGAAAGAGCTGGTAAGATAGGACCAAAATGACTTATTTGAATCTTTTAGTCCTTAACTTGATGGTGGATTAGTGGGTCAAGTTGAATAGGTTTCTCACCAAGTCTACGGCCTCTTGAAAAGCTTGAATGAAAATTTTGAAAGGTGAAAGCATTTCATATTCTTTAATCAGGTTATTTAGATATTTTTTGTAAATTAGCTATGTAATTATATCGATTAATATTCTCTCAGTTGTAGTCTCTCTATCTCTCTCTACTAAAACACGTATGAATTGGTCAACTCACACAGTTATTTGGTGCATGAAAAAGTTTGTGCGTCAGTTCCTAGAGCAAAAAATCCGGTTCTATGCATGCACAAGTCTGTAGCTTTTGTATTTATGTTTTGAGAGGAAATTGGAATGTCAATAGTGAACTTTCATCAACAGGTGAACCAGGAAAACTGATACGTGAACGCTATCGAACAGCTTCTCAAGTGGTCCAGAATCAAGTTAGAAACTTTACCACTTACAGTCTAGATATATGTATGTCTTGGGTTAAATCATAAATGTTGCCAAGTGCAGTTCTACATGCTCTATGTTCCATATTTTTCTATCGAGTATCCCTTCTTATTCTAGTGCTGAAAGTGTCACCCTTATGGTCTGTTCTTTTATATATTTAGTGATTTGACTGCAACTGCTCTGCGAAAAACATTGATTTGTGTAGACAACATTAGAAGGAAGGTCGAGAAAGTAGCTTTTTGATGAGCCTTCTATTATTTTATGTCCTCATTAACAGGAAAACTTACAAAAAGTATATATATTCTGGAAAGACATCCCCTGTTTCAATACGGCTGACAATATTACAAGGTGGACTTTGGATAAGTTCGTTTTAATTTAACTAGCTATAAATATCAATTATTTTTTGCGTGACTTATTTTAAACTTTTCATATTGTTCATTTATTTATTGATTGAACTTTCTCATAGGTCATGCGACTCATATCATTTTGTTTTTCTGACATTAGTTATGTTATTGGATCTTGCAAATCTGAAGTGTTTATTCAGACCTGTATTTGAATTGTCAAATGTCACTAGTCACTTTGTGGTCTACTCTATCATCATGGTCTCACTCTTACATATTTGAAAGATCTTTTGGATTCTTTTAGAAGTTTATGTGCAAATGAATTGGCGTTCTTTACTTTGTATTTCTTACTTGTTCATATAATTTGTACTTTCTGTGAGTTTCTTTGTGAATATAATGTGATACAAGGTGCAACTGCAAAGTGCAAAATGATTCATAATTAGTTGAAGAACATATTATAGATGCTTAATAAATAAAAATCATAACATGAGAGACGTTTATTGTTTTCGTAGGCCATGCAGTGTATGCACTTACCACTTAGGTGCCCGTTGAACAACTCTGTGTTCAGTTGGTCATGTTTTCATTCAGGGCTGCCCAAAAGTTTGTTTCAAACAGACTATCAGTTTTGAAATTGTATTTTTTTTTTTTTTTTTATGGTTGTTTTACTCTTTTGGTAATTCTACTGTCCAACTTTTTCTTCATTATAAATTATTTTCAATGCATTCAGAAATAATTCATGTATGACTTCGGGACTTTTCTTGACCATTTCAGGGGAAGTTGAGTTGTTTGATGATCAATGACATTGATGCTGGCATTGGTAGATTTGGTAAGATTATATTTACTTAAGACATAAAATTATAAAAAAAGTGAATAAAAATAACGTTAATGCATCATCTGTTACCTCTTTTAAAGATAATTCAAATTAACAACGTTAATGCATCATCTGTTACCTCTTTTAAAGATAATTCAAATTAACATTTGGAGTTCAATTTTATTAGATTATATTATATATTGAAGTATTTATTCAACCATATATAATAAGTATGCTTATATTTTGTTCTTGTCTAGAGAATACACAGGTGACAGTCAATAATCAAATTGTTGCTGGAACTCTGATGAATCTAGCTGACAATCCTAACAGAGTTAGCATTGGACAAGATTGGCGAGAAGCAGATATTACAAACAGAATTCCGATCATTCTTACTGGAAATGATTTTTCAACTATTTATGCTCCCTTAATTCGTGATGGCAGGATGGAAAAATTCTACTGGTATGAAATTAATTGTTTTCAAGATTATTACGTTGTTAACTTCTTAAAGAAGTTATAATATATTGTACTAGTATAAGTTATAATATATATTTAGATCTGTGATCATGTTTGGATCCTAATGTATAAGTTACATTCTATACTTGTGATACTCACCCTCTTGTTTCCTTTTGTTTTTCAAGTCATAAATAGTATTATAGCTAAACCTCCCTCTTCTAAAATGTGATTTGGTAACAGGCAGCCTAACCGCGAAGACATAGTGAATATTGTTCATAGAATGTATGAGAAGGATGGGATATCCAGGGCTCAGGTCATTGACATCGTAAACACGTTTCCTAACCAAGGTAAGAAACCTTTTTTGTGCAATTTTAAAGCTTTCAAATTGGGGTTGATACCACCAACAAGTTTGTGGAAAGCGACTCCTTTTCGCTTAGCGAGGATCAATTATAAATTCCAACAAGTTGAACCTGAAGTAGTATCATGGTCACTCTTGCTCTCTCGTTCTCTCTTTTTGTGTGTATTTTGTGGAGTGCTGGACGATGACCATGAAAATTCTTTATATTCATTTAGTCGTATCTTGTAAATTCAATATACTTAATGTAGCATTTTTGTTTCATCACAAATGTAAATAGCTGCCAACAATTGTATGTTTCACACAAACAGGGAAAATTTTGGTGTATGATTTGTGGGGAGTGAGGGAGGTTAGAAGGTCTCGGACGATATTTTTCTGTCTCTGACACTCTAATATCCACAACGTACAGCATTCTTAACTTTCAAAGCAAAGTTGTGAACGTATCATCATTATCTTACATTTAAAAATTGATCCTTTTCTTTTTTCTCAGCTTTGGATTTTTATGGAGCTCTAAGGTCACGGACATATGATACATCCATTTCTAAGGTATATAACATTATCATTGGCATTTGTAAGACCTTGATACTATCAATGTTTCTTATAAACCATTTATTGAACGAAGGTGTTAGGAACCATTCCATCCATTAGAAAAGTTGAATAATTTAATATTTTCACATTGAACTCCCTTTTTGTTTCAGTGGGTTGATGATATTGGAGGAATGGAAAAGCTAGGAGAAAAGCTTCTTAAGAGAAGGAAGAATGAAGAGCTTCCTACATTCACACCACCAGAGGTGATCAATCTATAACATTTCCAAATTCATGCTTATTTGGTTTGTCTATTCTGCTAGTCCTTTATTTGCTTGATGTTATCAATAGTTACTTAGTCGACTGATCAATCAACAAATACGTGGGTACTATTATATATATATATATATATATATATATTACATTTATAGATACATAATGTTGATGTATTCACAATGAAAGTACTCTATAGCACGTTAATTTATGAAAATTTTCTTAATTGTCAGTATGATAGAATAAATAATACTTAATCACATTGAAGCGAAGCTGTGTAGCTCTCTAAAGAAGTCTAGCATGAATATTCACACTATTTTATATCCTCGCTTCACCAATGTGATCATTATCTATCTTCACTGTACAGTAAGTTTTAATTGTTATAATAAAACGTACGTCTTCTTGTTCGTTCTGAAGATCTGTATGACATTCCAATTATTTATCTCTGAATCGAAAATGACTAGTTGCACATAATTACCTTTCGTCTATGGAATATTTAGGAAGTATATATGTAAATTTGTTCCACAATGGTAATATAATGATTTTTTTCTGTTAGTCTTCTGGAGTATACTGTCTGGATTTGCATAAAGTTAAAAGGAACGAACAGAACAGAACAGAACTTACTACTTTAGTTGAAAATTATATATAGTCCTTCTGCTCTTTTCTTTATTATTTAATACAGAATCAGTGAAGTATGTCATTCACTATTTCCATGTCCATCGTCTAGTTACTTGAACTTAAAGTATAGGTAGACATGGAGTGACTTTTGTATTTGGTTGAACAGCAAACAATGGACACCCTTCTTGAAGCAGGCTATTCTTTGATCAAAGAACAGCAATTTGTCATGGAGACTAAGCTTTCAAAAGAATACATGAAGAACATGGATGACTAGCTAGAAAAGTGAGATAGTGACTTAAATTTTTTTGTGATATCTGTTCACATCACATTTTTCATTGATTAACAAGCGAATTCATGTATTTTTATTGTCCACGGTATTCGTTACTTAATTCTCTTTTTTTTTATGAGCACATCTGAACCAAGCATTTATGGTTCACATCGTTAGTCACTGCATAAATATATGTTACATTTATGATTGCGACCTACTTAATTTCTCA

mRNA sequence

AAAAAGAAAAAAAAAATCATATTTAAATCCGAAAATGCGGAATTCGGCTGAACAAAAATGGCTATCGCCATATCCGGCGTCTCCCTTCCCTCACTCTTTCACTACAAAAATTCAATTATCGCGCGAAAAAGCCGAATTCGTTCCTTCTCCATTCGATCTTGCAAGGATGTTTCCGGTGAAGGCGACGGCGGGGGCGGCGAGCCTTCGCAGAAGCCGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCTGAGGGCAAGGACTATCTCTATAGGCTTGGCAGCGAGGCAGATAACATGAACATCGCCGTCGGAGCTAGAGCTGGCGTCATCGACGATCTCTTCGCCGGGAACTTCCTTGGCAGAGACTCGGACATTGTGTTTGATTACCGCCAGAAGGTCACTAGATCGTTCGAGCACCTTCAAGGAGACTATTACATTGCCCCTGTTTTCATGGATAAAGTTGTATGCCACATTGTGAAGAACTTCATAGTTCACCTTCTCAATATCAAAGTTCCCCTTATCTTAGGTATTTGGGGAGGAAAGGGTCAAGGAAAGTCATTTCAGACTGAACTTATATTCCAGGCTATGGGAGTGGAACCCGTGATAATGTCTGCTGGAGAATTAGAATCAGAAAGAGCTGGTGAACCAGGAAAACTGATACGTGAACGCTATCGAACAGCTTCTCAAGTGGTCCAGAATCAAGGGAAGTTGAGTTGTTTGATGATCAATGACATTGATGCTGGCATTGGTAGATTTGAGAATACACAGGTGACAGTCAATAATCAAATTGTTGCTGGAACTCTGATGAATCTAGCTGACAATCCTAACAGAGTTAGCATTGGACAAGATTGGCGAGAAGCAGATATTACAAACAGAATTCCGATCATTCTTACTGGAAATGATTTTTCAACTATTTATGCTCCCTTAATTCGTGATGGCAGGATGGAAAAATTCTACTGGCAGCCTAACCGCGAAGACATAGTGAATATTGTTCATAGAATGTATGAGAAGGATGGGATATCCAGGGCTCAGGTCATTGACATCGTAAACACGTTTCCTAACCAAGCTTTGGATTTTTATGGAGCTCTAAGGTCACGGACATATGATACATCCATTTCTAAGTGGGTTGATGATATTGGAGGAATGGAAAAGCTAGGAGAAAAGCTTCTTAAGAGAAGGAAGAATGAAGAGCTTCCTACATTCACACCACCAGAGCAAACAATGGACACCCTTCTTGAAGCAGGCTATTCTTTGATCAAAGAACAGCAATTTGTCATGGAGACTAAGCTTTCAAAAGAATACATGAAGAACATGGATGACTAGCTAGAAAAGTGAGATAGTGACTTAAATTTTTTTGTGATATCTGTTCACATCACATTTTTCATTGATTAACAAGCGAATTCATGTATTTTTATTGTCCACGGTATTCGTTACTTAATTCTCTTTTTTTTTATGAGCACATCTGAACCAAGCATTTATGGTTCACATCGTTAGTCACTGCATAAATATATGTTACATTTATGATTGCGACCTACTTAATTTCTCA

Coding sequence (CDS)

ATGGCTATCGCCATATCCGGCGTCTCCCTTCCCTCACTCTTTCACTACAAAAATTCAATTATCGCGCGAAAAAGCCGAATTCGTTCCTTCTCCATTCGATCTTGCAAGGATGTTTCCGGTGAAGGCGACGGCGGGGGCGGCGAGCCTTCGCAGAAGCCGAAGAGGCTGTCGGAGAAATCTTCCTGGGAAGCCAAGGACTCTGAGGGCAAGGACTATCTCTATAGGCTTGGCAGCGAGGCAGATAACATGAACATCGCCGTCGGAGCTAGAGCTGGCGTCATCGACGATCTCTTCGCCGGGAACTTCCTTGGCAGAGACTCGGACATTGTGTTTGATTACCGCCAGAAGGTCACTAGATCGTTCGAGCACCTTCAAGGAGACTATTACATTGCCCCTGTTTTCATGGATAAAGTTGTATGCCACATTGTGAAGAACTTCATAGTTCACCTTCTCAATATCAAAGTTCCCCTTATCTTAGGTATTTGGGGAGGAAAGGGTCAAGGAAAGTCATTTCAGACTGAACTTATATTCCAGGCTATGGGAGTGGAACCCGTGATAATGTCTGCTGGAGAATTAGAATCAGAAAGAGCTGGTGAACCAGGAAAACTGATACGTGAACGCTATCGAACAGCTTCTCAAGTGGTCCAGAATCAAGGGAAGTTGAGTTGTTTGATGATCAATGACATTGATGCTGGCATTGGTAGATTTGAGAATACACAGGTGACAGTCAATAATCAAATTGTTGCTGGAACTCTGATGAATCTAGCTGACAATCCTAACAGAGTTAGCATTGGACAAGATTGGCGAGAAGCAGATATTACAAACAGAATTCCGATCATTCTTACTGGAAATGATTTTTCAACTATTTATGCTCCCTTAATTCGTGATGGCAGGATGGAAAAATTCTACTGGCAGCCTAACCGCGAAGACATAGTGAATATTGTTCATAGAATGTATGAGAAGGATGGGATATCCAGGGCTCAGGTCATTGACATCGTAAACACGTTTCCTAACCAAGCTTTGGATTTTTATGGAGCTCTAAGGTCACGGACATATGATACATCCATTTCTAAGTGGGTTGATGATATTGGAGGAATGGAAAAGCTAGGAGAAAAGCTTCTTAAGAGAAGGAAGAATGAAGAGCTTCCTACATTCACACCACCAGAGCAAACAATGGACACCCTTCTTGAAGCAGGCTATTCTTTGATCAAAGAACAGCAATTTGTCATGGAGACTAAGCTTTCAAAAGAATACATGAAGAACATGGATGACTAG

Protein sequence

MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMKNMDD

Homology

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BLAST of CmoCh08G005670.1 vs. ExPASy Swiss-Prot
Match: P93431 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RCA PE=1 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 1.5e-90
Identity = 165/303 (54.46%), Postives = 220/303 (72.61%), Query Frame = 0


Query: 118 TRSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIF 177
           T  F++  G +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+F
Sbjct: 112 TYDFDNTMGGFYIAPAFMDKLVVHISKNFMT-LPNIKVPLILGIWGGKGQGKSFQCELVF 171

Query: 178 QAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRF- 237
             MG+ P++MSAGELES  AGEP KLIR+RYR A+ +++ +GK+ CL IND+DAG GR  
Sbjct: 172 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIK-KGKMCCLFINDLDAGAGRMG 231

Query: 238 ENTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRD 297
             TQ TVNNQ+V  TLMN+ADNP  V +   + + D   R+PII+TGNDFST+YAPLIRD
Sbjct: 232 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKED-NPRVPIIVTGNDFSTLYAPLIRD 291

Query: 298 GRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSI 357
           GRMEKFYW P R+D V +   ++  D +    ++ IV++FP Q++DF+GALR+R YD  +
Sbjct: 292 GRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEV 351

Query: 358 SKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSK 417
            KWV D  G+E +G++L+  R  E  P F  P+ T++ L+E GY L+KEQ+ V   +L++
Sbjct: 352 RKWVSDT-GVENIGKRLVNSR--EGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAE 408

Query: 418 EYM 420
           +Y+
Sbjct: 412 QYL 408

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BLAST of CmoCh08G005670.1 vs. ExPASy Swiss-Prot
Match: O49074 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii OX=28526 PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 6.3e-89
Identity = 196/429 (45.69%), Postives = 271/429 (63.17%), Query Frame = 0


Query: 1   MAIAIS--GVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSE 60
           MA ++S  G +  +     NS+        +F  +S K V  +G     + S +  R+  
Sbjct: 1   MAASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKG-VSSPKVSNRNLRVVA 60

Query: 61  KSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLF-AGNFLGRDSDIVFDYRQKV 120
           +   E K+   K  LY   S+ D  +IA G   G++D LF A    G    I+  Y + V
Sbjct: 61  QEVDETKEDRWKG-LYDNTSD-DQQDIARG--KGLVDSLFQAPTGTGTHHAIMNSY-EYV 120

Query: 121 TRSFEHLQGD-----YYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQ 180
           +++ +  Q D     +YIAP FMDK+V HI KNF+  L NIKVPLILG+WGGKGQGKSFQ
Sbjct: 121 SQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGVWGGKGQGKSFQ 180

Query: 181 TELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAG 240
            EL+F+ MG+ P++MSAGELES  AGEP KLIR+RYR A+++++ +G + CL IND+DAG
Sbjct: 181 CELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIR-KGNMCCLFINDLDAG 240

Query: 241 IGRF-ENTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYA 300
            GR    TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+PII+TGNDFST+YA
Sbjct: 241 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQE-NARVPIIVTGNDFSTLYA 300

Query: 301 PLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRT 360
           PLIRDGRMEKFYW P RED + +   ++  D +    V+ IV++FP Q++DF+GALR+R 
Sbjct: 301 PLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARV 360

Query: 361 YDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVME 420
           YD  + KWV    G+E +GEKLL  R     PTF  P+ T++ LLE G  L++EQ+ V  
Sbjct: 361 YDDEVRKWVSGT-GIELIGEKLLNSRDGP--PTFEQPKMTLEKLLEYGNMLVQEQENVKR 417

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BLAST of CmoCh08G005670.1 vs. ExPASy Swiss-Prot
Match: Q9ZT00 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays OX=4577 GN=RCA1 PE=2 SV=3)

HSP 1 Score: 328.9 bits (842), Expect = 8.2e-89
Identity = 170/335 (50.75%), Postives = 234/335 (69.85%), Query Frame = 0


Query: 92  GVIDDLFAGNFLGRDSDIV----FDYRQKVTRS--FEHLQGDYYIAPVFMDKVVCHIVKN 151
           G++D+LF    +G  + +     +DY  +  +S  F+++   +YIA  FMDK+V H+ KN
Sbjct: 86  GLVDNLFQAP-MGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKN 145

Query: 152 FIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIR 211
           F+  L NIKVPLILGIWGGKGQGKSFQ EL+F  MG+ P++MSAGELES  AGEP KLIR
Sbjct: 146 FMT-LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIR 205

Query: 212 ERYRTASQVVQNQGKLSCLMINDIDAGIGRF-ENTQVTVNNQIVAGTLMNLADNPNRVSI 271
           +RYR AS +++ +GK+SCL IND+DAG GR    TQ TVNNQ+V  TLMN+ADNP  V +
Sbjct: 206 QRYREASDLIK-KGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQL 265

Query: 272 GQDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGI 331
              + + D   R+PII+TGNDFST+YAPLIRDGRMEKFYW P RED + +   ++  DG+
Sbjct: 266 PGMYNKED-NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGV 325

Query: 332 SRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPT 391
               V+ +V+TFP Q++DF+GALR+R YD  + +WV +  G+E +  KL+  +  E  PT
Sbjct: 326 DEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSET-GVENIARKLVNSK--EGPPT 385

Query: 392 FTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYM 420
           F  P+ T++ LLE G+ L+ EQ+ V   +L+ +Y+
Sbjct: 386 FEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYL 413

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BLAST of CmoCh08G005670.1 vs. ExPASy Swiss-Prot
Match: Q40565 (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RCA PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.4e-88
Identity = 193/435 (44.37%), Postives = 269/435 (61.84%), Query Frame = 0


Query: 1   MAIAIS--GVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSE 60
           MA ++S  G +  +     NS+        +F  ++ K V G+     G  S K    S 
Sbjct: 1   MATSVSTIGAANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGK-----GVSSPKVTNRSL 60

Query: 61  KSSWEAKDSEGKDYLYR-------LGSEADNMNIAVGARAGVIDDLF-AGNFLGRDSDIV 120
           + + E KD++ K   Y             D  +IA G   G++D LF A    G    ++
Sbjct: 61  RIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARG--KGMVDSLFQAPTGTGTHHAVL 120

Query: 121 --FDYRQKVTRSF--EHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKG 180
             ++Y  +  R +  ++    +YIAP FMDK+V HI KNF+  L NIKVPLILG+WGGKG
Sbjct: 121 QSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFL-KLPNIKVPLILGVWGGKG 180

Query: 181 QGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMI 240
           QGKSFQ EL+F+ MG+ P++MSAGELES  AGEP KLIR+RYR A+++++ +G + CL I
Sbjct: 181 QGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIR-KGNICCLFI 240

Query: 241 NDIDAGIGRF-ENTQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGND 300
           ND+DAG GR    TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+PII+TGND
Sbjct: 241 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQE-NARVPIIVTGND 300

Query: 301 FSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYG 360
           FST+YAPLIRDGRMEKFYW P RED + +   ++  D +    VI IV+TFP Q++DF+G
Sbjct: 301 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFG 360

Query: 361 ALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKE 420
           ALR+R YD  + KWV    G+E +G+KLL     +  PTF  P+ T++ LLE G  L++E
Sbjct: 361 ALRARVYDDEVRKWVSGT-GIEAIGDKLL--NSFDGPPTFEQPKMTVEKLLEYGNMLVQE 420

[Close]

BLAST of CmoCh08G005670.1 vs. ExPASy Swiss-Prot
Match: Q7X999 (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata OX=66636 GN=RCA2 PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.1e-88
Identity = 166/334 (49.70%), Postives = 229/334 (68.56%), Query Frame = 0


Query: 92  GVIDDLFAGNFLGRDSDIV---FDYRQKVTRSF--EHLQGDYYIAPVFMDKVVCHIVKNF 151
           G++D LF           V   +DY  +  R +  ++    +YIAP FMDK+V HI KNF
Sbjct: 90  GMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNF 149

Query: 152 IVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRE 211
           +  L NIK+PLILGIWGGKGQGKSFQ EL+F  MG+ P++MSAGELES  AGEP KLIR+
Sbjct: 150 L-SLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 209

Query: 212 RYRTASQVVQNQGKLSCLMINDIDAGIGRF-ENTQVTVNNQIVAGTLMNLADNPNRVSIG 271
           RYR A+ +++ +GK+ CL IND+DAG GR    TQ TVNNQ+V  TLMN+ADNP  V + 
Sbjct: 210 RYREAADIIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLP 269

Query: 272 QDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGIS 331
             + + +   R+PII+TGNDFST+YAPLIRDGRMEKFYW P RED + +   ++  D + 
Sbjct: 270 GMYNKEE-NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP 329

Query: 332 RAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTF 391
              ++ +V+ FP Q++DF+GALR+R YD  + KWV ++ G++ +G+KL+  +  E  PTF
Sbjct: 330 EEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEV-GVDTIGKKLVNSK--EGPPTF 389

Query: 392 TPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYM 420
             P+ T+D LL+ G  L++EQ+ V   +L+ +YM
Sbjct: 390 EQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYM 417

[Close]

BLAST of CmoCh08G005670.1 vs. ExPASy TrEMBL
Match: A0A6J1H7W0 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461246 PE=4 SV=1)

HSP 1 Score: 846.3 bits (2185), Expect = 5.6e-242
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS
Sbjct: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360
           KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV
Sbjct: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360

Query: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420
           DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK
Sbjct: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420

Query: 421 NMDD 425
           NMDD
Sbjct: 421 NMDD 424

[Close]

BLAST of CmoCh08G005670.1 vs. ExPASy TrEMBL
Match: A0A6J1KVM6 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497605 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.0e-235
Identity = 416/424 (98.11%), Postives = 418/424 (98.58%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MAIAIS VSLPSLF YKN IIARKSRIRSFSIRSCKDVSGEGD GGGEP QKPKRLSEKS
Sbjct: 1   MAIAISAVSLPSLFQYKNLIIARKSRIRSFSIRSCKDVSGEGD-GGGEPLQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLG+EADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRF NTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFGNTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360
           KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV
Sbjct: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360

Query: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420
           DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSL+KEQQFVMETKLSKEYMK
Sbjct: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYMK 420

Query: 421 NMDD 425
           NMDD
Sbjct: 421 NMDD 423

[Close]

BLAST of CmoCh08G005670.1 vs. ExPASy TrEMBL
Match: A0A6J1DL15 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021429 PE=4 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 3.2e-221
Identity = 386/425 (90.82%), Postives = 407/425 (95.76%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGG-GEPSQKPKRLSEK 60
           MAI+ISG+SLPSLF YKNS IAR+ RIRSF+IRS KDV GE  GGG GEPS++ KRLSE+
Sbjct: 1   MAISISGLSLPSLFQYKNSTIAREIRIRSFAIRSSKDVPGETSGGGDGEPSERLKRLSEQ 60

Query: 61  SSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTR 120
           SSWEAKDSEG+DYLYRLG+EADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYR KVTR
Sbjct: 61  SSWEAKDSEGRDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRHKVTR 120

Query: 121 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 180
           SFE+LQGDYYIAPVFMDKVVCHIVKNFI HLLNIKVPLILGIWGGKGQGKSFQTELIFQ 
Sbjct: 121 SFEYLQGDYYIAPVFMDKVVCHIVKNFIAHLLNIKVPLILGIWGGKGQGKSFQTELIFQT 180

Query: 181 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENT 240
           MGVEPVIMSAGELESERAGEPGKLIRERYRTASQV+QNQGKLSCLMINDIDAGIGRF NT
Sbjct: 181 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVIQNQGKLSCLMINDIDAGIGRFGNT 240

Query: 241 QVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRM 300
           QVTVNNQI AGTLMNLADNP RVSIGQDWRE+DITNRIPIILTGNDFSTIYAPLIRDGRM
Sbjct: 241 QVTVNNQIAAGTLMNLADNPTRVSIGQDWRESDITNRIPIILTGNDFSTIYAPLIRDGRM 300

Query: 301 EKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKW 360
           EKFYWQPNREDIVNIVHRMYEKDGISR+QVIDIVNTFPNQALDFYGALRSRTYD ++SKW
Sbjct: 301 EKFYWQPNREDIVNIVHRMYEKDGISRSQVIDIVNTFPNQALDFYGALRSRTYDAAVSKW 360

Query: 361 VDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYM 420
           VDDIGG+EKLG+KLLKRRKNE+LPTFTPPEQTM+ LLEAGYSL+KEQQ +METKLSKEYM
Sbjct: 361 VDDIGGVEKLGDKLLKRRKNEKLPTFTPPEQTMEALLEAGYSLVKEQQLIMETKLSKEYM 420

Query: 421 KNMDD 425
           KNMDD
Sbjct: 421 KNMDD 425

[Close]

BLAST of CmoCh08G005670.1 vs. ExPASy TrEMBL
Match: A0A5A7UYP6 (Ribulose bisphosphate carboxylase/oxygenase activase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001550 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.4e-216
Identity = 375/426 (88.03%), Postives = 405/426 (95.07%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGE-GDGG-GGEPSQKPKRLSE 60
           MA +ISG+SLPS+F YK+SI+ARK R  SFS+RS  DVS E G GG G + S++PKRLSE
Sbjct: 1   MAFSISGLSLPSVFRYKSSILARKPRFHSFSVRSSNDVSSEVGSGGDGSDSSKRPKRLSE 60

Query: 61  KSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVT 120
           +S+WEAKDSEGKDYLYRLG+EADNMNIAVGARAGVIDDLFAGNFLG+DSDIVFDYRQKVT
Sbjct: 61  QSTWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFLGKDSDIVFDYRQKVT 120

Query: 121 RSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQ 180
           RSFEHLQGDYYIAP FMDKVVCHIVKNFIVHLLN+KVPLILG+WGGKGQGKSFQTELIFQ
Sbjct: 121 RSFEHLQGDYYIAPTFMDKVVCHIVKNFIVHLLNVKVPLILGVWGGKGQGKSFQTELIFQ 180

Query: 181 AMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFEN 240
            MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGK+SCLMINDIDAGIGRF  
Sbjct: 181 MMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGIGRFGQ 240

Query: 241 TQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGR 300
           TQVTVNNQIV+GTLMNLADNP RVS+GQDWREADI +RIPIILTGNDFSTIYAPLIRDGR
Sbjct: 241 TQVTVNNQIVSGTLMNLADNPTRVSVGQDWREADILHRIPIILTGNDFSTIYAPLIRDGR 300

Query: 301 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISK 360
           MEKFYWQPNREDIVNIVHRMYEKDGISRAQV+DIVNTFPNQALDFYGALRSRTYD++ISK
Sbjct: 301 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVVDIVNTFPNQALDFYGALRSRTYDSAISK 360

Query: 361 WVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEY 420
           WVDDIGG+EKLGEKLL+RRKNE+LPTFTPPEQT++ LL+AGYSL+KEQQ +METKLSKEY
Sbjct: 361 WVDDIGGVEKLGEKLLRRRKNEKLPTFTPPEQTLEALLKAGYSLVKEQQLIMETKLSKEY 420

Query: 421 MKNMDD 425
           MKNMDD
Sbjct: 421 MKNMDD 426

[Close]

BLAST of CmoCh08G005670.1 vs. ExPASy TrEMBL
Match: A0A1S3CFE2 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499863 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.4e-216
Identity = 375/426 (88.03%), Postives = 405/426 (95.07%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGE-GDGG-GGEPSQKPKRLSE 60
           MA +ISG+SLPS+F YK+SI+ARK R  SFS+RS  DVS E G GG G + S++PKRLSE
Sbjct: 1   MAFSISGLSLPSVFRYKSSILARKPRFHSFSVRSSNDVSSEVGSGGDGSDSSKRPKRLSE 60

Query: 61  KSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVT 120
           +S+WEAKDSEGKDYLYRLG+EADNMNIAVGARAGVIDDLFAGNFLG+DSDIVFDYRQKVT
Sbjct: 61  QSTWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFLGKDSDIVFDYRQKVT 120

Query: 121 RSFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQ 180
           RSFEHLQGDYYIAP FMDKVVCHIVKNFIVHLLN+KVPLILG+WGGKGQGKSFQTELIFQ
Sbjct: 121 RSFEHLQGDYYIAPTFMDKVVCHIVKNFIVHLLNVKVPLILGVWGGKGQGKSFQTELIFQ 180

Query: 181 AMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFEN 240
            MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGK+SCLMINDIDAGIGRF  
Sbjct: 181 MMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGIGRFGQ 240

Query: 241 TQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGR 300
           TQVTVNNQIV+GTLMNLADNP RVS+GQDWREADI +RIPIILTGNDFSTIYAPLIRDGR
Sbjct: 241 TQVTVNNQIVSGTLMNLADNPTRVSVGQDWREADILHRIPIILTGNDFSTIYAPLIRDGR 300

Query: 301 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISK 360
           MEKFYWQPNREDIVNIVHRMYEKDGISRAQV+DIVNTFPNQALDFYGALRSRTYD++ISK
Sbjct: 301 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVVDIVNTFPNQALDFYGALRSRTYDSAISK 360

Query: 361 WVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEY 420
           WVDDIGG+EKLGEKLL+RRKNE+LPTFTPPEQT++ LL+AGYSL+KEQQ +METKLSKEY
Sbjct: 361 WVDDIGGVEKLGEKLLRRRKNEKLPTFTPPEQTLEALLKAGYSLVKEQQLIMETKLSKEY 420

Query: 421 MKNMDD 425
           MKNMDD
Sbjct: 421 MKNMDD 426

[Close]

BLAST of CmoCh08G005670.1 vs. NCBI nr
Match: XP_022960536.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 846.3 bits (2185), Expect = 1.2e-241
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS
Sbjct: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360
           KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV
Sbjct: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360

Query: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420
           DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK
Sbjct: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420

Query: 421 NMDD 425
           NMDD
Sbjct: 421 NMDD 424

[Close]

BLAST of CmoCh08G005670.1 vs. NCBI nr
Match: XP_023515166.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 839.3 bits (2167), Expect = 1.4e-239
Identity = 422/424 (99.53%), Postives = 423/424 (99.76%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGD GGGEPSQKPKRLSEKS
Sbjct: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGD-GGGEPSQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360
           KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV
Sbjct: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360

Query: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420
           DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSL+KEQQFVMETKLSKEYMK
Sbjct: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYMK 420

Query: 421 NMDD 425
           NMDD
Sbjct: 421 NMDD 423

[Close]

BLAST of CmoCh08G005670.1 vs. NCBI nr
Match: KAG6593351.1 (hypothetical protein SDJN03_12827, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 830.1 bits (2143), Expect = 8.6e-237
Identity = 419/424 (98.82%), Postives = 419/424 (98.82%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MA AISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGD  GGEP QKPKRLSEKS
Sbjct: 1   MANAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGD--GGEPLQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCH VKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHTVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360
           KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV
Sbjct: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360

Query: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420
           DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK
Sbjct: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420

Query: 421 NMDD 425
           NMDD
Sbjct: 421 NMDD 422

[Close]

BLAST of CmoCh08G005670.1 vs. NCBI nr
Match: XP_023004209.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 825.5 bits (2131), Expect = 2.1e-235
Identity = 416/424 (98.11%), Postives = 418/424 (98.58%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MAIAIS VSLPSLF YKN IIARKSRIRSFSIRSCKDVSGEGD GGGEP QKPKRLSEKS
Sbjct: 1   MAIAISAVSLPSLFQYKNLIIARKSRIRSFSIRSCKDVSGEGD-GGGEPLQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLG+EADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGNEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRF NTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFGNTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360
           KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV
Sbjct: 301 KFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWV 360

Query: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMK 420
           DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSL+KEQQFVMETKLSKEYMK
Sbjct: 361 DDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLVKEQQFVMETKLSKEYMK 420

Query: 421 NMDD 425
           NMDD
Sbjct: 421 NMDD 423

[Close]

BLAST of CmoCh08G005670.1 vs. NCBI nr
Match: KAG7025696.1 (hypothetical protein SDJN02_12194, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 821.2 bits (2120), Expect = 4.0e-234
Identity = 420/441 (95.24%), Postives = 420/441 (95.24%), Query Frame = 0


Query: 1   MAIAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGDGGGGEPSQKPKRLSEKS 60
           MA AISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGD  GGEP QKPKRLSEKS
Sbjct: 1   MANAISGVSLPSLFHYKNSIIARKSRIRSFSIRSCKDVSGEGD--GGEPLQKPKRLSEKS 60

Query: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120
           SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS
Sbjct: 61  SWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRS 120

Query: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180
           FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM
Sbjct: 121 FEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAM 180

Query: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240
           GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ
Sbjct: 181 GVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQ 240

Query: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300
           VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME
Sbjct: 241 VTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGRME 300

Query: 301 KFYW-----------------QPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDF 360
           KFYW                 QPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDF
Sbjct: 301 KFYWYEINCFQDYYVVNFLKKQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDF 360

Query: 361 YGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLI 420
           YGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLI
Sbjct: 361 YGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLI 420

Query: 421 KEQQFVMETKLSKEYMKNMDD 425
           KEQQFVMETKLSKEYMKNMDD
Sbjct: 421 KEQQFVMETKLSKEYMKNMDD 439

[Close]

BLAST of CmoCh08G005670.1 vs. TAIR 10
Match: AT1G73110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 622.5 bits (1604), Expect = 2.6e-178
Identity = 304/399 (76.19%), Postives = 349/399 (87.47%), Query Frame = 0


Query: 31  SIRSCKDVSGEG-----DGGGGEPSQKPKRLSEKSSWEAKDSEGKDYLYRLGSEADNMNI 90
           SI   K  S +G     D GG +P    K+LSE+SSWE KDSEGKDYLYRLG+E+DN+NI
Sbjct: 37  SIVCSKPSSNDGGKVANDDGGAKPR---KKLSEQSSWEVKDSEGKDYLYRLGAESDNVNI 96

Query: 91  AVGARAGVIDDLFAGNFLGRDSDIVFDYRQKVTRSFEHLQGDYYIAPVFMDKVVCHIVKN 150
           AVGAR+G+IDD+F G+FLG+DSDIVFDYRQK TRSFEHLQGDYYIAP F+DKV  HIVKN
Sbjct: 97  AVGARSGMIDDVFIGDFLGKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHIVKN 156

Query: 151 FIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLIR 210
           ++   LNIK+PLILGIWGGKGQGK+FQTELIF+ MGVEPVIMSAGELES+RAGEPG+LIR
Sbjct: 157 YLAPSLNIKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIR 216

Query: 211 ERYRTASQVVQNQGKLSCLMINDIDAGIGRFENTQVTVNNQIVAGTLMNLADNPNRVSIG 270
           +RYRTASQV+QNQGK+S LMINDIDAG+GRF  TQ+TVNNQIV GTLMNLADNP RVS+G
Sbjct: 217 DRYRTASQVIQNQGKMSVLMINDIDAGLGRFGETQMTVNNQIVVGTLMNLADNPTRVSVG 276

Query: 271 QDWREADITNRIPIILTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVHRMYEKDGIS 330
           Q+WREAD+ NR+P+I+TGNDFST+YAPLIR+GRMEKFYWQP REDIVNIV RMYEKDGIS
Sbjct: 277 QEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIVNIVSRMYEKDGIS 336

Query: 331 RAQVIDIVNTFPNQALDFYGALRSRTYDTSISKWVDDIGGMEKLGEKLLKRRKNEELPTF 390
           R  VI IV+ FPNQALDFYGALRSRTYD SI KWVD+ GGME LG+ LL+R+K +E+P F
Sbjct: 337 RKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQF 396

Query: 391 TPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEYMKNMDD 425
           T PEQT++ LLE+GYSLI EQ+ +METKLSKEYMKNMDD
Sbjct: 397 TAPEQTVEALLESGYSLINEQKLIMETKLSKEYMKNMDD 432

[Close]

BLAST of CmoCh08G005670.1 vs. TAIR 10
Match: AT2G39730.1 (rubisco activase )

HSP 1 Score: 316.6 bits (810), Expect = 3.0e-86
Identity = 158/301 (52.49%), Postives = 214/301 (71.10%), Query Frame = 0


Query: 120 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 179
           + +++   +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+   
Sbjct: 123 NLDNMMDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGIWGGKGQGKSFQCELVMAK 182

Query: 180 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRF-EN 239
           MG+ P++MSAGELES  AGEP KLIR+RYR A+ +++ +GK+ CL IND+DAG GR    
Sbjct: 183 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIK-KGKMCCLFINDLDAGAGRMGGT 242

Query: 240 TQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGR 299
           TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+PII TGNDFST+YAPLIRDGR
Sbjct: 243 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEE-NARVPIICTGNDFSTLYAPLIRDGR 302

Query: 300 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISK 359
           MEKFYW P RED + +   ++  D I    ++ +V+ FP Q++DF+GALR+R YD  + K
Sbjct: 303 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRK 362

Query: 360 WVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEY 419
           +V+ + G+EK+G++L+  R  E  P F  PE T + L+E G  L+ EQ+ V   +L++ Y
Sbjct: 363 FVESL-GVEKIGKRLVNSR--EGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETY 417

[Close]

BLAST of CmoCh08G005670.1 vs. TAIR 10
Match: AT2G39730.2 (rubisco activase )

HSP 1 Score: 316.6 bits (810), Expect = 3.0e-86
Identity = 158/301 (52.49%), Postives = 214/301 (71.10%), Query Frame = 0


Query: 120 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 179
           + +++   +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+   
Sbjct: 123 NLDNMMDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGIWGGKGQGKSFQCELVMAK 182

Query: 180 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRF-EN 239
           MG+ P++MSAGELES  AGEP KLIR+RYR A+ +++ +GK+ CL IND+DAG GR    
Sbjct: 183 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIK-KGKMCCLFINDLDAGAGRMGGT 242

Query: 240 TQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGR 299
           TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+PII TGNDFST+YAPLIRDGR
Sbjct: 243 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEE-NARVPIICTGNDFSTLYAPLIRDGR 302

Query: 300 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISK 359
           MEKFYW P RED + +   ++  D I    ++ +V+ FP Q++DF+GALR+R YD  + K
Sbjct: 303 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRK 362

Query: 360 WVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEY 419
           +V+ + G+EK+G++L+  R  E  P F  PE T + L+E G  L+ EQ+ V   +L++ Y
Sbjct: 363 FVESL-GVEKIGKRLVNSR--EGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETY 417

[Close]

BLAST of CmoCh08G005670.1 vs. TAIR 10
Match: AT2G39730.3 (rubisco activase )

HSP 1 Score: 316.6 bits (810), Expect = 3.0e-86
Identity = 158/301 (52.49%), Postives = 214/301 (71.10%), Query Frame = 0


Query: 120 SFEHLQGDYYIAPVFMDKVVCHIVKNFIVHLLNIKVPLILGIWGGKGQGKSFQTELIFQA 179
           + +++   +YIAP FMDK+V HI KNF+  L NIKVPLILGIWGGKGQGKSFQ EL+   
Sbjct: 123 NLDNMMDGFYIAPAFMDKLVVHITKNFLT-LPNIKVPLILGIWGGKGQGKSFQCELVMAK 182

Query: 180 MGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKLSCLMINDIDAGIGRF-EN 239
           MG+ P++MSAGELES  AGEP KLIR+RYR A+ +++ +GK+ CL IND+DAG GR    
Sbjct: 183 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIK-KGKMCCLFINDLDAGAGRMGGT 242

Query: 240 TQVTVNNQIVAGTLMNLADNPNRVSIGQDWREADITNRIPIILTGNDFSTIYAPLIRDGR 299
           TQ TVNNQ+V  TLMN+ADNP  V +   + + +   R+PII TGNDFST+YAPLIRDGR
Sbjct: 243 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEE-NARVPIICTGNDFSTLYAPLIRDGR 302

Query: 300 MEKFYWQPNREDIVNIVHRMYEKDGISRAQVIDIVNTFPNQALDFYGALRSRTYDTSISK 359
           MEKFYW P RED + +   ++  D I    ++ +V+ FP Q++DF+GALR+R YD  + K
Sbjct: 303 MEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRK 362

Query: 360 WVDDIGGMEKLGEKLLKRRKNEELPTFTPPEQTMDTLLEAGYSLIKEQQFVMETKLSKEY 419
           +V+ + G+EK+G++L+  R  E  P F  PE T + L+E G  L+ EQ+ V   +L++ Y
Sbjct: 363 FVESL-GVEKIGKRLVNSR--EGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETY 417

The following BLAST results are available for this feature:

BLAST of CmoCh08G005670.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93431	1.5e-90	54.46	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sat...	[more]
O49074	6.3e-89	45.69	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum p...	[more]
Q9ZT00	8.2e-89	50.75	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays ...	[more]
Q40565	2.4e-88	44.37	Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotia...	[more]
Q7X999	3.1e-88	49.70	Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea ...	[more]

BLAST of CmoCh08G005670.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7W0	5.6e-242	100.00	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucurbita...	[more]
A0A6J1KVM6	1.0e-235	98.11	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucurbita...	[more]
A0A6J1DL15	3.2e-221	90.82	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 O...	[more]
A0A5A7UYP6	2.4e-216	88.03	Ribulose bisphosphate carboxylase/oxygenase activase OS=Cucumis melo var. makuwa...	[more]
A0A1S3CFE2	2.4e-216	88.03	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis m...	[more]

BLAST of CmoCh08G005670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960536.1	1.2e-241	100.00	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita m...	[more]
XP_023515166.1	1.4e-239	99.53	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita p...	[more]
KAG6593351.1	8.6e-237	98.82	hypothetical protein SDJN03_12827, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004209.1	2.1e-235	98.11	ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Cucurbita m...	[more]
KAG7025696.1	4.0e-234	95.24	hypothetical protein SDJN02_12194, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh08G005670.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73110.1	2.6e-178	76.19	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G39730.1	3.0e-86	52.49	rubisco activase	[more]
AT2G39730.2	3.0e-86	52.49	rubisco activase	[more]
AT2G39730.3	3.0e-86	52.49	rubisco activase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.8.1070		coord: 307..422 e-value: 6.7E-39 score: 134.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..63
None	No IPR available	PANTHER	PTHR32429:SF11	OSJNBA0011F23.7 PROTEIN	coord: 25..424
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 161..303 e-value: 3.2E-12 score: 47.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 121..306 e-value: 5.0E-32 score: 112.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 151..327
IPR044960	Ribulose bisphosphate carboxylase/oxygenase activase-like	PANTHER	PTHR32429	FAMILY NOT NAMED	coord: 25..424

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh08G005670	CmoCh08G005670	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005670.1:exon:7242	CmoCh08G005670.1:exon:7242	exon
CmoCh08G005670.1:exon:7243	CmoCh08G005670.1:exon:7243	exon
CmoCh08G005670.1:exon:7244	CmoCh08G005670.1:exon:7244	exon
CmoCh08G005670.1:exon:7245	CmoCh08G005670.1:exon:7245	exon
CmoCh08G005670.1:exon:7246	CmoCh08G005670.1:exon:7246	exon
CmoCh08G005670.1:exon:7247	CmoCh08G005670.1:exon:7247	exon
CmoCh08G005670.1:exon:7248	CmoCh08G005670.1:exon:7248	exon
CmoCh08G005670.1:exon:7249	CmoCh08G005670.1:exon:7249	exon
CmoCh08G005670.1:exon:7250	CmoCh08G005670.1:exon:7250	exon
CmoCh08G005670.1:exon:7251	CmoCh08G005670.1:exon:7251	exon
CmoCh08G005670.1:exon:7252	CmoCh08G005670.1:exon:7252	exon
CmoCh08G005670.1:exon:7253	CmoCh08G005670.1:exon:7253	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005670.1:five_prime_utr	CmoCh08G005670.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_2	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_3	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_4	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_5	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_6	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_7	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_8	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_9	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_10	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_11	CDS
CmoCh08G005670.1:cds	CmoCh08G005670.1:cds_12	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005670.1:three_prime_utr	CmoCh08G005670.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005670.1	CmoCh08G005670.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity