CmoCh06G001840.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G001840.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	serine/threonine-protein kinase HT1-like
Location	Cmo_Chr06: 1004284 .. 1005904 (-)
Sequence length	868
RNA-Seq Expression	CmoCh06G001840.1
Synteny	CmoCh06G001840.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACGACTCTCCCTCTTCTCCAGATCCATAATCTCGATGTCGAGTGGTTTGTCGATCTGTTTTTGGAGGATTACTTGTTGATTGGTTTGTGAATCCTGCACAGTTTCTTTCTAAGATGAAGTTTTATTGGCTATCTTGTCTGTCCCTGTAGTTGTATAGCACTGTGACCTTGCGCCAGGGAGAGAAGAAGCATTACAACAACAAGGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCTTGACGAATCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGGTACTAAAAGCTGCAATTTTTTTATTCTGTTCATCTTATCACATATTTGTTCAGATTCAATCGCATGCAATAAACGGTTGAGGATTGTTGGGAAAGGAGTCACAGATTGGCTAATTAAAGGGTTGATCATGGGTTTATAAGTAAGGAATACTATTTCCATTGGTATTGGTATGAGGCTTTTTGGAGAAACTAAAAGCAAAGCCATGAGAACTTATGCTCAAAGTGGACAATATTATACTATTGTGGAGAGTCGTGATTCCTAACATAGTATTAGAGTCATGCCCTTAACTTAGCCATGTCAATGGAATTCTCAAATGTCGAACAAAGAAGTTGTGAACCTCGAACGTATAGTCAAGTGTCAAATGGAAGATGTATTTTGTTCAAGGGCTTCAGACAAAGAGTCGAGCCTCGGTTAAGGAGAGGCTGTTCGAGGGTAGAGGAGGCTCTATGGTGTACATTGTTCAAGGTTAGGATTGTTGGGAAAGGAGTCCCACATCGGCTAATTAAAGGGTTGATCGTAGGTTTATAAGTAAGGAATATATCTCTGTTGGTATGAGGTTTTTTGGAGAAACTAAAAGCAAAGCCACGAGAGTTTATGCTCAAACTGAACAATATTATACTATCCATGTTCTTTTGGACTGTTTTCTTCTGTCATATTATACGTTTGTTTTCTGAAATATCTAACCTAACCATTTGAGGCTATGGTCTGGAAATGCAGCAAGAGAGGCCTAGTATTCCAGGCGACATACCTCCTGATCTAGCATTTATAGTTCAGTCGTGTTGGGTTGAAGATCCCAACATGAGGCCCAGCTTCAGCCAGATCATCCGGATGCTTAATGAATATCTATTTACACTCCCACCTCCTTTGTTATCTTCACAAGCATCTTATACAACCGAGACAGCAACGACTAGCGACGGTGCTGTAACCGAGTTCTCCGCTCGAGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAAAAGGCTAAGGGCTCGCAATAAGGGGTATAATTTTTGAATAGCTTGTTCTCTTTTCCACATGGAGAAAAAGACATGCCTGTGGTAGTGTATCCATATGTATTTTGACTACCCGGATTCTAGGACTCAAAGACGATGATGAATACAATGAAGGCTGTGGAAAAGAGAGGATGTCAATGGGAGAACCCATTCACCAAATAATTGTTCAACTGATTTGGGTTGTAAAGCCACATTGCTAATTTGCTAAATATTAAGGATATATCATACTCATGTGTAGAGTATCTGACTCGTAGTGGATAAAACGTCAATTATCATTCTAAAA

mRNA sequence

ATGAACACGACTCTCCCTCTTCTCCAGATCCATAATCTCGATGTCGAGTGGTTTGTCGATCTGTTTTTGGAGGATTACTTGTTGATTGATGAAGTTTTATTGGCTATCTTGTCTGTCCCTTTGTATAGCACTGTGACCTTGCGCCAGGGAGAGAAGAAGCATTACAACAACAAGGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCTTGACGAATCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGGCCTAGTATTCCAGGCGACATACCTCCTGATCTAGCATTTATAGTTCAGTCGTGTTGGGTTGAAGATCCCAACATGAGGCCCAGCTTCAGCCAGATCATCCGGATGCTTAATGAATATCTATTTACACTCCCACCTCCTTTGTTATCTTCACAAGCATCTTATACAACCGAGACAGCAACGACTAGCGACGGTGCTGTAACCGAGTTCTCCGCTCGAGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAAAAGGCTAAGGGCTCGCAATAAGGGGTATAATTTTTGAATAGCTTGTTCTCTTTTCCACATGGAGAAAAAGACATGCCTGTGGTAGTGTATCCATATGTATTTTGACTACCCGGATTCTAGGACTCAAAGACGATGATGAATACAATGAAGGCTGTGGAAAAGAGAGGATGTCAATGGGAGAACCCATTCACCAAATAATTGTTCAACTGATTTGGGTTGTAAAGCCACATTGCTAATTTGCTAAATATTAAGGATATATCATACTCATGTGTAGAGTATCTGACTCGTAGTGGATAAAACGTCAATTATCATTCTAAAA

Coding sequence (CDS)

ATGAACACGACTCTCCCTCTTCTCCAGATCCATAATCTCGATGTCGAGTGGTTTGTCGATCTGTTTTTGGAGGATTACTTGTTGATTGATGAAGTTTTATTGGCTATCTTGTCTGTCCCTTTGTATAGCACTGTGACCTTGCGCCAGGGAGAGAAGAAGCATTACAACAACAAGGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCTTGACGAATCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGGCCTAGTATTCCAGGCGACATACCTCCTGATCTAGCATTTATAGTTCAGTCGTGTTGGGTTGAAGATCCCAACATGAGGCCCAGCTTCAGCCAGATCATCCGGATGCTTAATGAATATCTATTTACACTCCCACCTCCTTTGTTATCTTCACAAGCATCTTATACAACCGAGACAGCAACGACTAGCGACGGTGCTGTAACCGAGTTCTCCGCTCGAGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAAAAGGCTAAGGGCTCGCAATAA

Protein sequence

MNTTLPLLQIHNLDVEWFVDLFLEDYLLIDEVLLAILSVPLYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDGAVTEFSARARGKFGFLRQLFAAKKAKGSQ

Homology

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy Swiss-Prot
Match: Q2MHE4 (Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 56/121 (46.28%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 51  EKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFI 110
           ++K Y  KVDVYSFGIVLWEL T  +PF+GM+ +QAA+A A K ERP +P    P LA +
Sbjct: 259 KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHL 318

Query: 111 VQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPL-LSSQASYTTETATTSD---GAVTEFS 168
           ++ CW E+P+ RP FS I+ +L +Y   +   L L+S AS T       D   G VT  S
Sbjct: 319 IKRCWSENPSKRPDFSNIVAVLEKYDECVKEGLPLTSHASLTKTKKAILDHLKGCVTSIS 378

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy Swiss-Prot
Match: Q55GU0 (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 40  PLYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSI 99
           P++ +  L  GE   Y  KVDVY+FGI+LWEL T  +P+ G+ ++Q A A   K  RP I
Sbjct: 822 PIWMSPELLMGE--DYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPI 881

Query: 100 PGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNE 135
           P   P  L+ ++Q+CW +DP  RPSF++I+ +LNE
Sbjct: 882 PNAWPYQLSHLIQACWHQDPLKRPSFTEILNLLNE 914

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy Swiss-Prot
Match: Q54I36 (Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum OX=44689 GN=pyk3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-18
Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 12   NLDVEWFVDLFLEDY----LLIDEVLLAILSVPLYSTVTLRQGEKKHYNNKVDVYSFGIV 71
            N+ ++ F ++ + D+     L D++ L+ ++ P + +  L +G    YN KVDVYSFG+V
Sbjct: 1179 NILLDEFKNIKIADFGLATTLSDDMTLSGITNPRWRSPELTKG--LVYNEKVDVYSFGLV 1238

Query: 72   LWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQ 131
            ++E+ T ++PFEG+    +A  AAF+  RP+IP D P  L  ++  CW  DP+ RPSF++
Sbjct: 1239 VYEIYTGKIPFEGLDGTASAAKAAFENYRPAIPPDCPVSLRKLITKCWASDPSQRPSFTE 1298

Query: 132  IIRML 133
            I+  L
Sbjct: 1299 ILTEL 1301

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy Swiss-Prot
Match: Q9ZQ31 (Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-18
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 51  EKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFI 110
           + + YN KVDVYSFGIVLWEL+T  +PF+ M+ +QAA+A   +  RP++P D  P L+ I
Sbjct: 303 QHRAYNQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNRGVRPTVPNDCLPVLSDI 362

Query: 111 VQSCWVEDPNMRPSFSQIIRML 133
           +  CW  +P +RP F +++++L
Sbjct: 363 MTRCWDANPEVRPCFVEVVKLL 384

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy Swiss-Prot
Match: Q8RWL6 (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 51  EKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFI 110
           E K Y+++ DV+S+ IVLWELLT  +P+  ++ LQAA     K  RP IP +  P L  +
Sbjct: 460 EHKPYDHRADVFSYAIVLWELLTGELPYSYLTPLQAAVGVVQKGLRPKIPKETHPKLTEL 519

Query: 111 VQSCWVEDPNMRPSFSQIIRMLNEYL 137
           ++ CW +DP +RP+F++II MLN+ +
Sbjct: 520 LEKCWQQDPALRPNFAEIIEMLNQLI 545

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy TrEMBL
Match: A0A6J1GBU9 (serine/threonine-protein kinase HT1-like OS=Cucurbita moschata OX=3662 GN=LOC111452745 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.1e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP
Sbjct: 226 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 285

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG 160
           GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG
Sbjct: 286 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG 345

Query: 161 AVTEFSARARGKFGFLRQLFAAKKAKGSQ 190
           AVTEFSARARGKFGFLRQLFAAKKAKGSQ
Sbjct: 346 AVTEFSARARGKFGFLRQLFAAKKAKGSQ 374

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy TrEMBL
Match: A0A6J1I1J9 (serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470052 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP
Sbjct: 226 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 285

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG 160
           GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG
Sbjct: 286 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG 345

Query: 161 AVTEFSARARGKFGFLRQLFAAKKAKGSQ 190
           AVTEFSAR RGKFGFLRQLFAAKKAKGSQ
Sbjct: 346 AVTEFSARTRGKFGFLRQLFAAKKAKGSQ 374

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy TrEMBL
Match: A0A6J1DXN1 (serine/threonine-protein kinase HT1 OS=Momordica charantia OX=3673 GN=LOC111024033 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.1e-71
Identity = 138/149 (92.62%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP
Sbjct: 225 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 284

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG 160
           GDIP DLAFIVQSCWVEDPNMRPSFSQIIRMLN YLFTLPPP  SS AS TT+TATTS+G
Sbjct: 285 GDIPADLAFIVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPPPSPSSPASDTTDTATTSNG 344

Query: 161 AVTEFSARARGKFGFLRQLFAAKKAKGSQ 190
           A+TEFSARARGKFGFLRQLFAAK+AK SQ
Sbjct: 345 AITEFSARARGKFGFLRQLFAAKRAKNSQ 373

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy TrEMBL
Match: A0A5A7TLL1 (Serine/threonine-protein kinase HT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005820 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 138/152 (90.79%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP
Sbjct: 222 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 281

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQA---SYTTETATT 160
           GDIPP+LAFIVQSCWVEDPNMRPSFSQIIRMLN YLFTLPPP LSS +   S TTETATT
Sbjct: 282 GDIPPELAFIVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPPPSLSSPSSPKSDTTETATT 341

Query: 161 SDGAVTEFSARARGKFGFLRQLFAAKKAKGSQ 190
           S+GA+TEFS+RARGKFGFLRQLFAAK+AK SQ
Sbjct: 342 SNGAITEFSSRARGKFGFLRQLFAAKRAKNSQ 373

[Close]

BLAST of CmoCh06G001840.1 vs. ExPASy TrEMBL
Match: A0A5D3DMQ1 (Serine/threonine-protein kinase HT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00270 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.7e-70
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP
Sbjct: 222 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 281

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQA---SYTTETATT 160
           GDIPP+LAFIVQSCWVEDPNMRPSFSQIIRMLN YLFTLPPP LSS +   S TTETATT
Sbjct: 282 GDIPPELAFIVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPPPSLSSPSSPKSDTTETATT 341

Query: 161 SDGAVTEFSARARGKFGFLRQLFAAKKAKGSQ 190
           S+GA+TEF++RARGKFGFLRQLFAAK+AK SQ
Sbjct: 342 SNGAITEFTSRARGKFGFLRQLFAAKRAKNSQ 373

[Close]

BLAST of CmoCh06G001840.1 vs. TAIR 10
Match: AT5G01850.1 (Protein kinase superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-58
Identity = 113/144 (78.47%), Postives = 121/144 (84.03%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERP +P
Sbjct: 188 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPVMP 247

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDG 160
             I P LAFIVQSCWVEDPNMRPSFSQIIR+LNE+L TL PP    Q    T T  T+  
Sbjct: 248 EGISPSLAFIVQSCWVEDPNMRPSFSQIIRLLNEFLLTLTPP--PPQPLPETATNRTNGR 307

Query: 161 AVTEFSARARGKFGFLRQLFAAKK 185
           A+TEFS R +GKF F+RQLFAAK+
Sbjct: 308 AITEFSIRPKGKFAFIRQLFAAKR 329

[Close]

BLAST of CmoCh06G001840.1 vs. TAIR 10
Match: AT3G27560.1 (Protein kinase superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 7.4e-37
Identity = 81/139 (58.27%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLRQGEKKHYN+KVD YSF IVLWEL+ N++PFEGMSNLQAAYAAAFK  RPS  
Sbjct: 196 LYSTVTLRQGEKKHYNHKVDAYSFAIVLWELILNKLPFEGMSNLQAAYAAAFKNLRPSAE 255

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFT------LPPP----------LL 160
            D+P DL  IV SCW EDPN RP+F++II+ML  YL T      +PPP          +L
Sbjct: 256 -DLPGDLEMIVTSCWKEDPNERPNFTEIIQMLLRYLTTVSAPQIIPPPNRRVFSSENIVL 315

Query: 161 SSQASYTTETATTSDGAVT 164
           S ++  T    +  DG V+
Sbjct: 316 SPESPGTCSLMSVRDGDVS 333

[Close]

BLAST of CmoCh06G001840.1 vs. TAIR 10
Match: AT5G40540.1 (Protein kinase superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-35
Identity = 78/134 (58.21%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLR GEKKHYN+KVD YSF IVLWEL+ N++PFEGMSNLQAAYAAAFK  RPS  
Sbjct: 196 LYSTVTLRHGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPS-A 255

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTL------PPPLLSSQASYTTET 160
            D+P DLA IV SCW EDPN RP+F++II+ML   L T+      PP +    +S  T  
Sbjct: 256 DDLPKDLAMIVTSCWKEDPNDRPNFTEIIQMLLRCLSTISSTELVPPAIKRVFSSENTVL 315

Query: 161 ATTSDGAVTEFSAR 169
              S G  +  + R
Sbjct: 316 PPESPGTCSLMTVR 328

[Close]

BLAST of CmoCh06G001840.1 vs. TAIR 10
Match: AT5G50180.1 (Protein kinase superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-34
Identity = 69/103 (66.99%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           LYSTVTLR GEKKHYN+KVD YSF IVLWELL N++PFEGMSNLQAAYAAAFK  RPS  
Sbjct: 190 LYSTVTLRLGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAE 249

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPL 144
             +P +L  IV SCW EDPN RP+F+ II +L  YL  +  P+
Sbjct: 250 -SLPEELGDIVTSCWNEDPNARPNFTHIIELLLNYLSKVGSPI 291

[Close]

BLAST of CmoCh06G001840.1 vs. TAIR 10
Match: AT5G66710.1 (Protein kinase superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 5.5e-24
Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 41  LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIP 100
           L+S  TL  GEKKHY++KVDVYSF IV WELLTN+ PF+G +N+  AYAA+ K +RPS+ 
Sbjct: 241 LFSYDTLEIGEKKHYDHKVDVYSFAIVFWELLTNKTPFKGKNNIFVAYAAS-KNQRPSVE 300

Query: 101 GDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPL----LSSQASYTTETAT 159
            ++P  +  I+QSCW E+P+ RP F +I   L   L +L         +S+A+  TE +T
Sbjct: 301 -NLPEGVVSILQSCWAENPDARPEFKEITYSLTNLLRSLSSDTDATSSNSKANIATEDST 360

The following BLAST results are available for this feature:

BLAST of CmoCh06G001840.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2MHE4	1.1e-21	46.28	Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q55GU0	3.1e-19	45.26	Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideu...	[more]
Q54I36	5.8e-18	37.60	Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum OX=44689 GN=pyk...	[more]
Q9ZQ31	5.8e-18	46.34	Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 P...	[more]
Q8RWL6	2.2e-17	44.19	Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 P...	[more]

BLAST of CmoCh06G001840.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBU9	5.1e-78	100.00	serine/threonine-protein kinase HT1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I1J9	1.5e-77	99.33	serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1DXN1	6.1e-71	92.62	serine/threonine-protein kinase HT1 OS=Momordica charantia OX=3673 GN=LOC1110240...	[more]
A0A5A7TLL1	3.0e-70	90.79	Serine/threonine-protein kinase HT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3DMQ1	6.7e-70	90.13	Serine/threonine-protein kinase HT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmoCh06G001840.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01850.1	1.5e-58	78.47	Protein kinase superfamily protein	[more]
AT3G27560.1	7.4e-37	58.27	Protein kinase superfamily protein	[more]
AT5G40540.1	2.4e-35	58.21	Protein kinase superfamily protein	[more]
AT5G50180.1	5.9e-34	66.99	Protein kinase superfamily protein	[more]
AT5G66710.1	5.5e-24	47.54	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020635	Tyrosine-protein kinase, catalytic domain	SMART	SM00219	tyrkin_6	coord: 5..132 e-value: 0.0023 score: -125.5
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	PK_Tyr_Ser-Thr	coord: 52..132 e-value: 2.1E-17 score: 63.3
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 31..161 e-value: 9.3E-26 score: 92.4
None	No IPR available	PANTHER	PTHR23257:SF864	SERINE/THREONINE-PROTEIN KINASE HT1-LIKE	coord: 42..167
None	No IPR available	PANTHER	PTHR23257	SERINE-THREONINE PROTEIN KINASE	coord: 42..167
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..136 score: 12.711427
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 53..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh06G001840	CmoCh06G001840	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G001840.1:exon:8117	CmoCh06G001840.1:exon:8117	exon
CmoCh06G001840.1:exon:8116	CmoCh06G001840.1:exon:8116	exon
CmoCh06G001840.1:exon:8115	CmoCh06G001840.1:exon:8115	exon
CmoCh06G001840.1:exon:8114	CmoCh06G001840.1:exon:8114	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G001840.1:three_prime_utr	CmoCh06G001840.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G001840.1:cds	CmoCh06G001840.1:cds_4	CDS
CmoCh06G001840.1:cds	CmoCh06G001840.1:cds_3	CDS
CmoCh06G001840.1:cds	CmoCh06G001840.1:cds_2	CDS
CmoCh06G001840.1:cds	CmoCh06G001840.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh06G001840.1	CmoCh06G001840.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004713	protein tyrosine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity