CmoCh06G000770.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000770.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	OTU domain-containing protein
Location	Cmo_Chr06: 468145 .. 471125 (-)
Sequence length	1254
RNA-Seq Expression	CmoCh06G000770.1
Synteny	CmoCh06G000770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTGAATTTCCATTTTTTTTTTTTAATGTCTAAAACAAAATGGTAGGAAAATATCTTGTGGAAGCGGCTGATCGAAGGCGCCTAATGTTTTACCTAGTTCTGCGAAGGTTGCTTAATTGGAACAGCTACTGTTCGAGAAGATTTGATCTTCGAGCAAACGCCTGGATGAAGCTACAGAACGAAACGAGTGGAAATTCAGAAGCAGCGTCTTCATTACAAATCCGACAAGGTAACATATGGATCATTGCCCTAATCTAATTCCGAAGCAATGCGTCTCAAGAAAGGGGCCTTGTGTTCGTGGCTCAAAATTAATCGCAAAGTTACCGTTGCAGGTATTCTTTCCTTTAATCCCATTTCTTGAATCTTATGCCATTTTTGGGGTTTGCTTTTGTTGTTTCTTTCTTCCACGTGCTCGGGTTTTTCTTCGAATTTTAAATCTCCTCCCCTCTTCGATTTGATCCTCTGCTGCTTGCCTTCTGTTGATCTTTCGCTGTTTGATTTTGTTCTTTCTCAAGCTTTGTTCAGGGTTTTCAGATTCTTGACCTTCGTGTTTTTCCTTGCTCAATGGTAATGGGGACTCTTATTATCTTCGTTCTAGTTCTTTTTCTTTTTCCCCTTTCCTTGTTCGTTGTTAATCTTCTTTTGGGTGTGTGCATTTATAGCCATCTGCTTGAACTTTGGTTTATATTTCAGTAACATAATGTGAATTCATATTGGCAGAGCATGAGCTATTGCAGCTGAAATGTAATTCTTAGTCATGGATATTTGTGATTTTAAGGCTGTTTATTGTACTGCATCATATTCTATATTACAAAAAAGAAACATGTTCATTTTGTAGTATTCCTGAACAAAGGTTTTGTTTAAGTGGATATGATTTTTGGACTGTATGTTAATGTTTTTGTAGACATCGAATCCGTTTTCGTTCTTGGTTTGGTTTGATCGTAGTTAGGAAGGTGGAAGGAGTCTAAATCAATGGACATTAATGAACCATCATCGATGGACGTTGCACATGACACACAATCAATTTGACTCAAGGTCCAGCACTAGTAGAAGTAGCGTATGTTAATGCTTTTGTAAACATCGATTTTTCGTTGACTCAGAGTAAGTATACATCCTTGTATTTATAGGAGGGCTTTCCTGTGACTAAGATCAAAACTGTTCAAGGAAATTAAAAAGGGGATATCATCAACAATTCCAACTTGGAAATTATTTGCTGAAGGAGTGTAATTAAATATACGAGAGGCATCCCTATCATATGATTAGGGGCTCCAACTCCACGATATATCGACACGTATACTTCATTGTTACTTTCAGCGAATTTAGATAGCTACTTCTTTGGCCATTGTAGCTATAGATGATATACCAGCATTGGTTTGTTCATGTTAAGCATCAGAGATAAAAGAAGGGCGTTCAAATTTTTTGGTCCAAATTATGGAATGCTTTCAATTTCTGACTTGTTTCCTCTTTCTTTGTTCTGTTAATTTCTCAGGCTACACCAGCATGCCTATTGGCTCAATAAGCGTTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGACCAAAGTGTTCGGATCAAACCATCTCCACAATGTCATCTTGTTCACCAAATACTAGCCAGAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCACTATCATGCAAAGGTATGAATATGAAACTCTCAATCCCCAATGATGATCAAATATAACATACGATGGCCAGAAAGATGTGCATCTGATGGCTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCAAGTATTCTGTTATAGGTGAGCTTTGAAGCCTTCTACGTCTTCTTTTACGTTAAACGGTCAAATCGACAATTGATTGTAGCAAATTGTTTGTTCTGGGCAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAACCTTCAGAGAGAGTTGGCAGATGAGTTGCGGACTAAAGTAAGTTCTATTAGTTTGTTTTTGAGAGAATACCATGGTGACAAGAATCCATATTTCAGACCAATTTCTTTTCAGGTTGCAGATGAGTTTATCAAAAGACGAGAGGAAACAGAATGGTGACTCTCTCTCTCTGTCTCTGTCTCTCTTAAAAAGAATGTTAAGTTTGTGAGGAACGTTCAGGAACTTATTAGATATTTTTAAAGTTTAAAGATCTATCAAAACACATTTTAAAGTCCAAGAACATTTTAGACACAAATTTAAAAGTTCAATGACTAAACTATCTCTACCGTATAGAACAAGATGAGGTTCAATAACATCCTGCCTGTGTTGACAATAGGTTCATTGAAGGCGATTTCGATTTGTACGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCTGAGCTATTCATGGCTTCTCATATTCTTCAGTAAGCGCTTCCTCTCAATACTTGTTTCTCTACTGTGGTATATGAATGAATTGCTTGTTAAGATTGGAGGCTGTGGTTGCTGCTGCAGTGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCCGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCACATCAAGGGGTCAGTATATCAAAACTTTAGTGTTCCTTAGTCAAATATTGTGAATTAATACACCC

mRNA sequence

AAATTTGAATTTCCATTTTTTTTTTTTAATGTCTAAAACAAAATGGTAGGAAAATATCTTGTGGAAGCGGCTGATCGAAGGCGCCTAATGTTTTACCTAGTTCTGCGAAGGTTGCTTAATTGGAACAGCTACTGTTCGAGAAGATTTGATCTTCGAGCAAACGCCTGGATGAAGCTACAGAACGAAACGAGTGGAAATTCAGAAGCAGCGTCTTCATTACAAATCCGACAAGGTAACATATGGATCATTGCCCTAATCTAATTCCGAAGCAATGCGTCTCAAGAAAGGGGCCTTGTGTTCGTGGCTCAAAATTAATCGCAAAGTTACCGTTGCAGGCTACACCAGCATGCCTATTGGCTCAATAAGCGTTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGACCAAAGTGTTCGGATCAAACCATCTCCACAATGTCATCTTGTTCACCAAATACTAGCCAGAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCACTATCATGCAAAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCAAGTATTCTGTTATAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAACCTTCAGAGAGAGTTGGCAGATGAGTTGCGGACTAAAGTTGCAGATGAGTTTATCAAAAGACGAGAGGAAACAGAATGGTTCATTGAAGGCGATTTCGATTTGTACGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCTGAGCTATTCATGGCTTCTCATATTCTTCATGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCCGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCACATCAAGGGGTCAGTATATCAAAACTTTAGTGTTCCTTAGTCAAATATTGTGAATTAATACACCC

Coding sequence (CDS)

ATGCGTCTCAAGAAAGGGGCCTTGTGTTCGTGGCTCAAAATTAATCGCAAAGTTACCGTTGCAGGCTACACCAGCATGCCTATTGGCTCAATAAGCGTTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGACCAAAGTGTTCGGATCAAACCATCTCCACAATGTCATCTTGTTCACCAAATACTAGCCAGAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCACTATCATGCAAAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCAAGTATTCTGTTATAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAACCTTCAGAGAGAGTTGGCAGATGAGTTGCGGACTAAAGTTGCAGATGAGTTTATCAAAAGACGAGAGGAAACAGAATGGTTCATTGAAGGCGATTTCGATTTGTACGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCTGAGCTATTCATGGCTTCTCATATTCTTCATGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCCGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCACATCAAGGGGTCAGTATATCAAAACTTTAG

Protein sequence

MRLKKGALCSWLKINRKVTVAGYTSMPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSSCSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRELADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPAHQGVSISKL

Homology

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy Swiss-Prot
Match: Q8LBZ4 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thaliana OX=3702 GN=OTU4 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 120/173 (69.36%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 130 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 131 STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 190

Query: 190 RSGKPAPSQNLQRELADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPE 249
           RSGK AP + +QRELADELRT+VADEFI+RR+ETEWF+EGDFD YV  +R P VWGGEPE
Sbjct: 191 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 250

Query: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDAL 303
           LFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDAL
Sbjct: 251 LFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDAL 303

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy Swiss-Prot
Match: Q8GYW0 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thaliana OX=3702 GN=OTU3 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.9e-14
Identity = 56/175 (32.00%), Postives = 81/175 (46.29%), Query Frame = 0


Query: 152 SSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRELADELRTK 211
           +S +  S   K   KY+V  + GDGRCLFR++  G     G     Q  +R+ ADELR  
Sbjct: 61  NSSMNRSPAAKKVEKYAVDRVKGDGRCLFRALVKGMAFNKGITLNPQR-ERDDADELRMA 120

Query: 212 VADEFIKRREETEWF--------IEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIV 271
           V +      +E E +        ++     +   + +   WGGE EL + S +   PIIV
Sbjct: 121 VKEVICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLVLSKLCKQPIIV 180

Query: 272 YMYDKASG-------GLISIAEYGDEY------GK--QNPITVLYHGFGHYDALQ 304
           Y+ +   G       G I I EYG E+      GK  +N + +LY G  HYD L+
Sbjct: 181 YIPEHEHGRGGGYGPGFIPIQEYGSEFRGGWGKGKTNKNVVRLLYSGRNHYDLLR 234

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy Swiss-Prot
Match: Q6GM06 (Deubiquitinase OTUD6B OS=Xenopus laevis OX=8355 GN=otud6b PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-08
Identity = 46/183 (25.14%), Postives = 85/183 (46.45%), Query Frame = 0


Query: 138 EAACEKEDNEENSDSSHVKLSHGKKVYT----------KYSVIGIPGDGRCLFRSVAHGA 197
           +AA EKE ++  +++    LS  + + +          +  +  IP DG C++R++ H  
Sbjct: 111 KAAQEKERDDRIAEAEIANLSGARHLESQKLAQILAERELQIRQIPSDGHCMYRAIEH-Q 170

Query: 198 CLRSGKPAPSQNLQRELADELRTKVAD--EFIKRREETEWFIEGDFDLYVSNMRKPRVWG 257
               G      NL+ + AD ++ +  D   F+      + + + +F  Y +++     WG
Sbjct: 171 LNEQGNSLTVANLRSQTADYMQKRAEDFLPFLTNSSTGDMYTQEEFQKYCTDIVNTPAWG 230

Query: 258 GEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLY--HGFG---HYD 304
           G+ EL   SHIL  PI V   +            G+EY  + PIT++Y  H +G   HY+
Sbjct: 231 GQLELRALSHILKTPIEVIQAESLP------IVIGEEYSNK-PITLVYMRHAYGLGEHYN 285

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy Swiss-Prot
Match: Q9UUK3 (Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=otu2 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-04
Identity = 38/143 (26.57%), Postives = 58/143 (40.56%), Query Frame = 0


Query: 170 IGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRELADELRTKVADEFIKRREETEWFIEG 229
           + IP DG CLF S++H           SQ         LR K AD  +K  E+ E F+  
Sbjct: 188 VDIPADGNCLFASISHQLNYHHNVKLNSQ--------ALRNKSADYVLKHCEQFEGFLLD 247

Query: 230 D-------FDLYVSNMRKPRVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAEYGDE 289
           +          Y + +R    WG + E+   ++ L  P+ VY      G ++       +
Sbjct: 248 EESGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVY---NTEGPVLKFNPSTVK 307

Query: 290 YGKQNPITVLYHGFG---HYDAL 303
           + K   I    H FG   HY++L
Sbjct: 308 FEKPLCIAYYQHLFGLGAHYNSL 319

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy TrEMBL
Match: A0A1S3B7A9 (OTU domain-containing protein At3g57810 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.8e-134
Identity = 239/292 (81.85%), Postives = 262/292 (89.73%), Query Frame = 0


Query: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 85
           M IGSIS+CTRN VPLN R+ +QMGSNICTVLSRRTS SCCSYGISRPK +DQ+++T+SS
Sbjct: 1   MSIGSISICTRNAVPLNLRIYTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISS 60

Query: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCKVHAEAACEK 145
           CSPNTSQRFQGGCLS CFSR+ I+ ++F  KDLITD G  GR +EISL+CK     A EK
Sbjct: 61  CSPNTSQRFQGGCLSTCFSRRSIDFQAFTVKDLITDGGSPGREVEISLACK-----AYEK 120

Query: 146 EDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRE 205
           +DNEENSDSSHVKLSHGKKVYT YSVIGIPGDGRCLFRSVAHGACLRSGKPAPS++LQR+
Sbjct: 121 DDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRD 180

Query: 206 LADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIV 265
           LADELR+ VADEFIKRREETEWF+EGDFD YVSNMRKP VWGGEPELFMASH+L APIIV
Sbjct: 181 LADELRSNVADEFIKRREETEWFVEGDFDTYVSNMRKPHVWGGEPELFMASHVLQAPIIV 240

Query: 266 YMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPAHQGVSISKL 316
           YMYDK SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIPA+QGV  SKL
Sbjct: 241 YMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIPANQGVGRSKL 287

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy TrEMBL
Match: A0A1S3B6T1 (OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.7e-132
Identity = 244/337 (72.40%), Postives = 267/337 (79.23%), Query Frame = 0


Query: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 85
           M IGSIS+CTRN VPLN R+ +QMGSNICTVLSRRTS SCCSYGISRPK +DQ+++T+SS
Sbjct: 1   MSIGSISICTRNAVPLNLRIYTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISS 60

Query: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCK--------- 145
           CSPNTSQRFQGGCLS CFSR+ I+ ++F  KDLITD G  GR +EISL+CK         
Sbjct: 61  CSPNTSQRFQGGCLSTCFSRRSIDFQAFTVKDLITDGGSPGREVEISLACKGMNVKLSIP 120

Query: 146 ------------------------------------VHAEAACEKEDNEENSDSSHVKLS 205
                                               VHAEAA EK+DNEENSDSSHVKLS
Sbjct: 121 NDGTFSKIKYNMRWPERWASAGLVFGWVVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLS 180

Query: 206 HGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRELADELRTKVADEFIK 265
           HGKKVYT YSVIGIPGDGRCLFRSVAHGACLRSGKPAPS++LQR+LADELR+ VADEFIK
Sbjct: 181 HGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRDLADELRSNVADEFIK 240

Query: 266 RREETEWFIEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAE 316
           RREETEWF+EGDFD YVSNMRKP VWGGEPELFMASH+L APIIVYMYDK SGGLISIAE
Sbjct: 241 RREETEWFVEGDFDTYVSNMRKPHVWGGEPELFMASHVLQAPIIVYMYDKDSGGLISIAE 300

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy TrEMBL
Match: A0A5D3DP86 (OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005670 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.7e-132
Identity = 244/337 (72.40%), Postives = 267/337 (79.23%), Query Frame = 0


Query: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 85
           M IGSIS+CTRN VPLN R+ +QMGSNICTVLSRRTS SCCSYGISRPK +DQ+++T+SS
Sbjct: 1   MSIGSISICTRNAVPLNLRIYTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISS 60

Query: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCK--------- 145
           CSPNTSQRFQGGCLS CFSR+ I+ ++F  KDLITD G  GR +EISL+CK         
Sbjct: 61  CSPNTSQRFQGGCLSTCFSRRSIDFQAFTVKDLITDGGSPGREVEISLACKGMNVKLSIP 120

Query: 146 ------------------------------------VHAEAACEKEDNEENSDSSHVKLS 205
                                               VHAEAA EK+DNEENSDSSHVKLS
Sbjct: 121 NDGTFSKIKYNMRWPERWASAGLVFGWVVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLS 180

Query: 206 HGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRELADELRTKVADEFIK 265
           HGKKVYT YSVIGIPGDGRCLFRSVAHGACLRSGKPAPS++LQR+LADELR+ VADEFIK
Sbjct: 181 HGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRDLADELRSNVADEFIK 240

Query: 266 RREETEWFIEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIVYMYDKASGGLISIAE 316
           RREETEWF+EGDFD YVSNMRKP VWGGEPELFMASH+L APIIVYMYDK SGGLISIAE
Sbjct: 241 RREETEWFVEGDFDTYVSNMRKPHVWGGEPELFMASHVLQAPIIVYMYDKDSGGLISIAE 300

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy TrEMBL
Match: A0A6J1J4D1 (OTU domain-containing protein At3g57810-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481658 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.9e-132
Identity = 243/351 (69.23%), Postives = 268/351 (76.35%), Query Frame = 0


Query: 8   LCSWLKINRKVTVAGYTSMPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCS 67
           +CSWL INRK  V GYT+M IGSISVCTRNV+PLNFRV +QMGSNICTVLSRRT  SCCS
Sbjct: 37  VCSWLNINRKPIVVGYTTMSIGSISVCTRNVIPLNFRVCTQMGSNICTVLSRRTPTSCCS 96

Query: 68  YGISRPKCSDQTISTMSSCSPNTSQRFQGGCLSYCFSRQP--IELKSFKDLITDEGLCGR 127
           YGISRPK +DQ+++ +SSCSPNT QR QGGCLSYCFSR+P   E  + KDL+T+ G  GR
Sbjct: 97  YGISRPKYTDQSVTIISSCSPNTCQRIQGGCLSYCFSRRPNDFEALTVKDLVTNRGSRGR 156

Query: 128 GLEISLSCK-----------------------------------------------VHAE 187
           GLEISL+CK                                               VHAE
Sbjct: 157 GLEISLACKGMNAKISVPSDGMCSKIKYNMRWPERCASASAGLVFGWVVCCSNSEPVHAE 216

Query: 188 AACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQ 247
           AA +K+ NEEN DSSHVK S GKKVY  YSVIGIPGDGRCLFRSVAHGACLRSGK AP++
Sbjct: 217 AAYDKKGNEENYDSSHVKFSRGKKVYIDYSVIGIPGDGRCLFRSVAHGACLRSGKSAPTE 276

Query: 248 NLQRELADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPELFMASHILH 307
           +LQRELADELRTKVA+EFIKRREETEWF+EGDFD YVSNMRK  VWGGEPELFMASH+L 
Sbjct: 277 SLQRELADELRTKVANEFIKRREETEWFVEGDFDTYVSNMRKSHVWGGEPELFMASHVLQ 336

Query: 308 APIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIPAHQG 310
           APIIVYMYDK +GGLISIAEYGDEYGK NPI VLYHGFGHYDALQIP++QG
Sbjct: 337 APIIVYMYDKDAGGLISIAEYGDEYGKHNPIRVLYHGFGHYDALQIPSNQG 387

[Close]

BLAST of CmoCh06G000770.1 vs. ExPASy TrEMBL
Match: A0A6J1DJ08 (OTU domain-containing protein At3g57810 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021529 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 238/294 (80.95%), Postives = 257/294 (87.41%), Query Frame = 0


Query: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 85
           M IGSIS CTRNVV LN RV  QMGSNIC+VLS R SNSCCSYGISRPK +DQ+++T+SS
Sbjct: 1   MNIGSISACTRNVVHLNSRVPMQMGSNICSVLSPRISNSCCSYGISRPKYADQSVTTISS 60

Query: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCKVHAEAACEK 145
           C+PNTSQRF GGCLSYCFSRQPI+ K+   KDLITD G  GRGLEISL+CK     ACEK
Sbjct: 61  CTPNTSQRFPGGCLSYCFSRQPIDFKNLTVKDLITDGGSHGRGLEISLACK-----ACEK 120

Query: 146 EDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRE 205
           EDNEENSDSS VK SHGK VYT YSVIGIPGDGRCLFRSVAHGACLRSGK APS++LQR+
Sbjct: 121 EDNEENSDSSPVKFSHGKTVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKAAPSESLQRD 180

Query: 206 LADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIV 265
           LADELR KVADEFIKRR+ETEWF+EGDFD YVSNMRKP +WGGEPELFMASH+LHAPIIV
Sbjct: 181 LADELRNKVADEFIKRRKETEWFVEGDFDRYVSNMRKPHIWGGEPELFMASHVLHAPIIV 240

Query: 266 YMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDALQIP--AHQGVSISKL 316
           YMYDK SGGLISIAEYGDEYGK+NPI VLYHGFGHYDALQIP  A +GV  SKL
Sbjct: 241 YMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIPATASKGVRRSKL 289

[Close]

BLAST of CmoCh06G000770.1 vs. TAIR 10
Match: AT3G57810.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 7.9e-68
Identity = 120/173 (69.36%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 130 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 88  STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 147

Query: 190 RSGKPAPSQNLQRELADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPE 249
           RSGK AP + +QRELADELRT+VADEFI+RR+ETEWF+EGDFD YV  +R P VWGGEPE
Sbjct: 148 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 207

Query: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDAL 303
           LFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDAL
Sbjct: 208 LFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDAL 260

[Close]

BLAST of CmoCh06G000770.1 vs. TAIR 10
Match: AT3G57810.2 (Cysteine proteinases superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 7.9e-68
Identity = 120/173 (69.36%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 130 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 131 STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 190

Query: 190 RSGKPAPSQNLQRELADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPE 249
           RSGK AP + +QRELADELRT+VADEFI+RR+ETEWF+EGDFD YV  +R P VWGGEPE
Sbjct: 191 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 250

Query: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDAL 303
           LFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDAL
Sbjct: 251 LFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDAL 303

[Close]

BLAST of CmoCh06G000770.1 vs. TAIR 10
Match: AT3G57810.3 (Cysteine proteinases superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 7.9e-68
Identity = 120/173 (69.36%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 130 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 189
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 131 STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 190

Query: 190 RSGKPAPSQNLQRELADELRTKVADEFIKRREETEWFIEGDFDLYVSNMRKPRVWGGEPE 249
           RSGK AP + +QRELADELRT+VADEFI+RR+ETEWF+EGDFD YV  +R P VWGGEPE
Sbjct: 191 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 250

Query: 250 LFMASHILHAPIIVYMYDKASGGLISIAEYGDEYGKQNPITVLYHGFGHYDAL 303
           LFMASH+L  PI VYM D  +GGLISIAEYG EYGK +PI VLYHGFGHYDAL
Sbjct: 251 LFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKDDPIRVLYHGFGHYDAL 303

[Close]

BLAST of CmoCh06G000770.1 vs. TAIR 10
Match: AT2G38025.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-15
Identity = 56/175 (32.00%), Postives = 81/175 (46.29%), Query Frame = 0


Query: 152 SSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRELADELRTK 211
           +S +  S   K   KY+V  + GDGRCLFR++  G     G     Q  +R+ ADELR  
Sbjct: 61  NSSMNRSPAAKKVEKYAVDRVKGDGRCLFRALVKGMAFNKGITLNPQR-ERDDADELRMA 120

Query: 212 VADEFIKRREETEWF--------IEGDFDLYVSNMRKPRVWGGEPELFMASHILHAPIIV 271
           V +      +E E +        ++     +   + +   WGGE EL + S +   PIIV
Sbjct: 121 VKEVICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLVLSKLCKQPIIV 180

Query: 272 YMYDKASG-------GLISIAEYGDEY------GK--QNPITVLYHGFGHYDALQ 304
           Y+ +   G       G I I EYG E+      GK  +N + +LY G  HYD L+
Sbjct: 181 YIPEHEHGRGGGYGPGFIPIQEYGSEFRGGWGKGKTNKNVVRLLYSGRNHYDLLR 234

The following BLAST results are available for this feature:

BLAST of CmoCh06G000770.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBZ4	1.1e-66	69.36	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thalian...	[more]
Q8GYW0	4.9e-14	32.00	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thalian...	[more]
Q6GM06	3.1e-08	25.14	Deubiquitinase OTUD6B OS=Xenopus laevis OX=8355 GN=otud6b PE=2 SV=1	[more]
Q9UUK3	7.9e-04	26.57	Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of CmoCh06G000770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7A9	3.8e-134	81.85	OTU domain-containing protein At3g57810 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3B6T1	2.7e-132	72.40	OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3DP86	2.7e-132	72.40	OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1J4D1	7.9e-132	69.23	OTU domain-containing protein At3g57810-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1DJ08	1.1e-130	80.95	OTU domain-containing protein At3g57810 isoform X2 OS=Momordica charantia OX=367...	[more]

BLAST of CmoCh06G000770.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57810.1	7.9e-68	69.36	Cysteine proteinases superfamily protein	[more]
AT3G57810.2	7.9e-68	69.36	Cysteine proteinases superfamily protein	[more]
AT3G57810.3	7.9e-68	69.36	Cysteine proteinases superfamily protein	[more]
AT2G38025.1	3.5e-15	32.00	Cysteine proteinases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003323	OTU domain	PFAM	PF02338	OTU	coord: 173..299 e-value: 3.1E-26 score: 92.3
IPR003323	OTU domain	PROSITE	PS50802	OTU	coord: 167..305 score: 16.575676
None	No IPR available	GENE3D	3.90.70.80		coord: 145..313 e-value: 2.5E-35 score: 123.5
None	No IPR available	PANTHER	PTHR12419	OTU DOMAIN CONTAINING PROTEIN	coord: 133..309
None	No IPR available	PANTHER	PTHR12419:SF8	OS09G0487700 PROTEIN	coord: 133..309
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 166..302

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh06G000770	CmoCh06G000770	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000770.1:exon:8469	CmoCh06G000770.1:exon:8469	exon
CmoCh06G000770.1:exon:8468	CmoCh06G000770.1:exon:8468	exon
CmoCh06G000770.1:exon:8467	CmoCh06G000770.1:exon:8467	exon
CmoCh06G000770.1:exon:8466	CmoCh06G000770.1:exon:8466	exon
CmoCh06G000770.1:exon:8465	CmoCh06G000770.1:exon:8465	exon
CmoCh06G000770.1:exon:8464	CmoCh06G000770.1:exon:8464	exon
CmoCh06G000770.1:exon:8463	CmoCh06G000770.1:exon:8463	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000770.1:three_prime_utr	CmoCh06G000770.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds_7	CDS
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds_6	CDS
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds_5	CDS
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds_4	CDS
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds_3	CDS
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds_2	CDS
CmoCh06G000770.1:cds	CmoCh06G000770.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000770.1:five_prime_utr	CmoCh06G000770.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000770.1	CmoCh06G000770.1-protein	polypeptide