CmoCh06G000750.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000750.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Basic helix-loop-helix transcription factor
Location	Cmo_Chr06: 459745 .. 465150 (-)
Sequence length	2604
RNA-Seq Expression	CmoCh06G000750.1
Synteny	CmoCh06G000750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACTGTAGAGGGTAAAATCCGTAGAAACCATTTTCTCTCTGCTTCTTTTTCTCTCATCTTTGTAAACAAAACTCCGTTTTGCGTATAATTATGCACTCCAAGTTGAACGGTACCATCAAGCAACGTTGCTTTCGCCATACTTCAAATGGGTTCCAGAAGTAATCTCGACTGATTATTAAGAGGAAGAAGAAGGTAGATTGGCTGCCATTGAAGATAGTTTCCTTTTCCTTCATTCCCCTCCATTTCCCCTCTGATTGATCGATTAGCTCTGTAATCCCACATTTGAGGAGCTGGGTTTTGCTCCGAATTTGGTGAAGGTGAAGGGGAATTTGTGAAGTTGTTGTTACTGTAAATGGAGATTGAAGTGGGGACTGTTGGTGGATCCAGTCCCATCGGGCGTCAGTTCAATTACACTGGACTTGAATCGCATCAATTCTGTGAAGAAATTCAGGGGTTGATGACGATTCCGTCGGAAAATGCTAGCTCCTTCACCGCGCTTCTTGAACTTCCGGCAACGCAGGCTTTAGAGCTTCTCCACTCGCCGGATTCCGCGGAGGTTAAGAAGGATGATTCCGTTCACTACCGTGTCAAAGACGTTCCGAAACCCTACTTCAGTGCCTTAAATTGCAATTTGACCTTCCCGACGAACTCGCCTCTAAACGAACACGACGCCAAATTCTCTGTCGTGGCTGAAGAACACTCGCCGGAGACGACGAGTTCAGTGCCGTTGAATTCGAGCGTCAGTTTGGAGAAAGTGAAGAACGAGCCCACCATTGAAACCGATTCGAACCCTAATCACTTGTATCCGAAAATCTCCGACCCGACGGTGGAGAACAACACGAATCAGAGATCGGTGAAGAGGAAGGAGCGCGAGAAAAAGGTAACCGATAATAAAAAATTTCAAAAGAACAAAAACAAAGAAACCTAGGGCTTTGATTTCTACATCAATTTCCATGTCTGAATTTCAATCAATTACAATCTTTAACCAATTCAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAGAGCCAGGAAGATGCAGAGAAGCTCCCGTACGTTCATGTCCGAGCCGGCCGTGGTCAAGCGACAGACAAACATAGCCTAGCAGAGCGAGTAATTTTCTTAATTAATCAGTACTTAAGATCTGATTATCAAATTTAGTCTGATTAACTGTGCTGAATTAACACTTCATTCCCTTTTGGTTTGAAAAGGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGGTCAGTAGTCTTCGTAGTTATGCAGTCTTTATCATAATTAAATGTTCTTTGATTCAATCTGTGGAGCTTTATTATGATTTCTCTCTAATTGTCTGCCAAAAAGTGGAATTATGGTTCTTGGATTATGAACTTTAATAACGGTTCTTGTCATTGTCACCTTTTCTGTAATAAAGTGGTTGCTTTTGAGCCAAGGGAAGTGCCCAGTAGGTCTTTTTCTTCATCTTTCCTTTCTTACCTTCTCTCGACCATCTCTCGAGAATCTGAATTCTACCCATGTGAGCTTAGTTCAATGGTAATTGACATATACTCTCGATCAAAAGGTCAAAAATTCGAATTCCGGGAAGATGGAGTTAGATGTTATTTGTTTATTTTGGTTCGGGAAGAGCTCAAATGAGTAAAAGTTCGCAGTCAACTTTATCGTGTATTCTACTCGCACGATGTTCGCTTAATATTTCTTATATTCATAGAGATTGCTTGAAATCTCAGCAATTTTCACTTTGATTGGCTGGGAAATTTAGTTCCAAAGGAATGCAAGCTGGACTTACCTTGAAGGAGTTGGGGGAATCAGAAGGGGTCCCATATGCTTGTTGGGTTGTTGGTACTCATTTGAGGGTCCATGCTATTTTCCATCTATTTTAAGTTAGGCATCCATCATAAACTGGATGCAAATATGGGATGACAGAACAGCAACTTCCTCACCTAACTTCTCGAGGACGTGGAAAATGTGAGCGTTTTTAGAAAAAGATATGCATCCCAGAGTTGTGAATAGCCACGATAGAGTGAGTCGAAGAATTACGAGACGTTTTGAAATAAACAGATTGAGACTGACCCCGACTCGTTTGTAATGTACCGTGTAGTTTAATGAACATTATAGTCTTATGAAGATTCAGTAGTTGAGAGAGGAAGATTAGATGTCGTCGTTAAGCACTGAACTGTTCTTTTTCTATTCATATCAAATGTAATGAAGTAGTCTGCAAGTTAGAAACTGAGTTCTTTATTTGTCTTCTTCCTTCCTCTGTGTCTCTGTAGATCTCAGGTACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCGCTGCAGCGTCAAGTGGAGGTCAGAATCTTACTTAAACGTTTTGAGATTCGTTCTGGAATGATACGTATATGATACGACTGGGTAGATAGAAATGTATAAGCTCGACAAGAATACGTATATGTACCTTGTTTTATGTATGTCAGCTCCTGGAGTTGTTCTTTTCGGTGGCTCTATCGATGATTGTTCGGACTAGCTTGCGTGTTCCTCGATTCAAAATAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCAATATGCATAATTTTCAGTAGTTATTTTCTTTTTATATATCAACCAACTTGTGTTGAACTTGCTGTGTTGCAGTTCTTGTCAATGAGGCTTGCAGCCGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAGTAAGTATATCAGCGCATCTGCTTCTTTTTCTTTGTCAACTTTCTGTGAACTAGCGACTGAGATTTAACGTCGTGTTATCGTTTACTGAAATCTCAGAACGAACCCGTACACGAAAGCAACCTTCCAACCATGGTTACGCCATTGATGTGGTCAGAAATCTCCCCAAGTGGAAGCAGACAACAATATCAACAGCAATGGCATTTTGATGCAGCAGTAGTTAACCAGCTAGCCGGGGCGAGGGACGAGCATAACCTTCATACTTTCAGCACTCCTGAAAACTCTCTTTTAAGTTACGACTCTTCAGCAAATTCAGGTATACAACTCTTACTCTATGACCTTATTTTGTAATACACTGACCAATTTAACTATGTATGAAACAGCAACCGTACGCTCAAAATCAGTTGAAGATGGAGGCGCGAAGGCAGCATTATATTTTAGTTGTAGGTAGCAGCAGTGTATATAGGGGGAAATATATTAATAGTGATAGGAGTAAGCAGAGAAGTAGAGAATCTGCCTCCACGTTCAACTGGGTGTTCAAGGGGAAGAAGACGACGAAGAAGACGACGAAGAAGACGAAGCCGGGAGGAATTTGATTTGGTATCTAAATTTTTAATGTGTATACTAATTTGGAGGCTGCTTTGATTGAAGCCAATACTCAAGACTGTCAGACTAAAATTCTACTGATTGTTATTGCTACTCTTTCTCCCATCTTTGTTGTTCCCAATATTCAGATGAAGAACACACAACTTGATGATATCAAAACCGAACGCCATCGATTCAACTAAGAATTTCTTCGGTGATCTTAATGAAATCTAACGTAATCCATTATCCGCCCACCAAGTATGGACCGGAGTGTTTTTCTTTAAAAGAAGAATTCTAATAAAATAATAATATAACTAAAAGGGAAACGAAAAATCAGAATCAAGAGATGAAGATGAATCAACGTCCAATGGCAATTCTATTCTTTTTCTTCTCTCTCATCATCCTTTCACACTGCGTTGTTCCCTCAATCAGACTTCCCGGCGGATCAACCTCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAGTCCGCTATTAACAACTGCCCCTCGCCGGTCCGCTGCTACGTTATATTTCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTGGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTTGAGATCACCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGGTGCGTGCGACACTCTCCCTCCCTCTCTCTTACATAATTACTGCATTTCTCTAAGTGAAATTTGATGCAGCTTGCACCTGGTTCGATGCGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACCGGAGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGTCAGTTTTTCATTCCCTTCTTAGTTGTGATGCTCAAACTTCAGTCTTTTTGGAGACATTATATATAAACAGTTTTCTGCTTTTTAGAACAAGATTTCAACTTTTTAGAAGTGGGGTTAGAGCAAAATACAGAAATTCAGACAAATGAAACCTATTTTTATATTACCAACTTGAAGATAACTCGATTAGTTTAGACAATTTCTCAACCAAAAGGTCGAAATGGTTTGAATCTCCACTCCTTTCCTATCCCATTAAGAAATTCTGTCTTCATATTCTCCTGTAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCAGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCAAACATAAACTTCATAAACATCACAGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCACATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAACAATCCTTTGGATTTCAGACCATCAACTGTGAGTAA

mRNA sequence

AGAACTGTAGAGGGTAAAATCCGTAGAAACCATTTTCTCTCTGCTTCTTTTTCTCTCATCTTTGTAAACAAAACTCCGTTTTGCGTATAATTATGCACTCCAAGTTGAACGGTACCATCAAGCAACGTTGCTTTCGCCATACTTCAAATGGGTTCCAGAAGTAATCTCGACTGATTATTAAGAGGAAGAAGAAGGTAGATTGGCTGCCATTGAAGATAGTTTCCTTTTCCTTCATTCCCCTCCATTTCCCCTCTGATTGATCGATTAGCTCTGTAATCCCACATTTGAGGAGCTGGGTTTTGCTCCGAATTTGGTGAAGGTGAAGGGGAATTTGTGAAGTTGTTGTTACTGTAAATGGAGATTGAAGTGGGGACTGTTGGTGGATCCAGTCCCATCGGGCGTCAGTTCAATTACACTGGACTTGAATCGCATCAATTCTGTGAAGAAATTCAGGGGTTGATGACGATTCCGTCGGAAAATGCTAGCTCCTTCACCGCGCTTCTTGAACTTCCGGCAACGCAGGCTTTAGAGCTTCTCCACTCGCCGGATTCCGCGGAGGTTAAGAAGGATGATTCCGTTCACTACCGTGTCAAAGACGTTCCGAAACCCTACTTCAGTGCCTTAAATTGCAATTTGACCTTCCCGACGAACTCGCCTCTAAACGAACACGACGCCAAATTCTCTGTCGTGGCTGAAGAACACTCGCCGGAGACGACGAGTTCAGTGCCGTTGAATTCGAGCGTCAGTTTGGAGAAAGTGAAGAACGAGCCCACCATTGAAACCGATTCGAACCCTAATCACTTGTATCCGAAAATCTCCGACCCGACGGTGGAGAACAACACGAATCAGAGATCGGTGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAGAGCCAGGAAGATGCAGAGAAGCTCCCGTACGTTCATGTCCGAGCCGGCCGTGGTCAAGCGACAGACAAACATAGCCTAGCAGAGCGAGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGGTCAGTAGTCTTCGTAGTTATGCAGTCTTTATCATAATTAAATGTTCTTTGATTCAATCTGTGGAGCTTTATTATGATTTCTCTCTAATTATCTCAGGTACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCGCTGCAGCGTCAAGTGGAGTTCTTGTCAATGAGGCTTGCAGCCGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAACGAACCCGTACACGAAAGCAACCTTCCAACCATGGTTACGCCATTGATGTGGTCAGAAATCTCCCCAAGTGGAAGCAGACAACAATATCAACAGCAATGGCATTTTGATGCAGCAGTAGTTAACCAGCTAGCCGGGGCGAGGGACGAGCATAACCTTCATACTTTCAGCACTCCTGAAAACTCTCTTTTAAGTTACGACTCTTCAGCAAATTCAGGGGAAGAAGACGACGAAGAAGACGACGAAGAAGACGAAGCCGGGAGGAATTTGATTTGACTTCCCGGCGGATCAACCTCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAGTCCGCTATTAACAACTGCCCCTCGCCGGTCCGCTGCTACGTTATATTTCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTGGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTTGAGATCACCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGCTTGCACCTGGTTCGATGCGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACCGGAGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGTGGAACAATCCTTTGGATTTCAGACCATCAACTGTGAGTAA

Coding sequence (CDS)

ATGGAGATTGAAGTGGGGACTGTTGGTGGATCCAGTCCCATCGGGCGTCAGTTCAATTACACTGGACTTGAATCGCATCAATTCTGTGAAGAAATTCAGGGGTTGATGACGATTCCGTCGGAAAATGCTAGCTCCTTCACCGCGCTTCTTGAACTTCCGGCAACGCAGGCTTTAGAGCTTCTCCACTCGCCGGATTCCGCGGAGGTTAAGAAGGATGATTCCGTTCACTACCGTGTCAAAGACGTTCCGAAACCCTACTTCAGTGCCTTAAATTGCAATTTGACCTTCCCGACGAACTCGCCTCTAAACGAACACGACGCCAAATTCTCTGTCGTGGCTGAAGAACACTCGCCGGAGACGACGAGTTCAGTGCCGTTGAATTCGAGCGTCAGTTTGGAGAAAGTGAAGAACGAGCCCACCATTGAAACCGATTCGAACCCTAATCACTTGTATCCGAAAATCTCCGACCCGACGGTGGAGAACAACACGAATCAGAGATCGGTGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAGAGCCAGGAAGATGCAGAGAAGCTCCCGTACGTTCATGTCCGAGCCGGCCGTGGTCAAGCGACAGACAAACATAGCCTAGCAGAGCGAGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGGTCAGTAGTCTTCGTAGTTATGCAGTCTTTATCATAATTAAATGTTCTTTGATTCAATCTGTGGAGCTTTATTATGATTTCTCTCTAATTATCTCAGGTACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCGCTGCAGCGTCAAGTGGAGTTCTTGTCAATGAGGCTTGCAGCCGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAACGAACCCGTACACGAAAGCAACCTTCCAACCATGGTTACGCCATTGATGTGGTCAGAAATCTCCCCAAGTGGAAGCAGACAACAATATCAACAGCAATGGCATTTTGATGCAGCAGTAGTTAACCAGCTAGCCGGGGCGAGGGACGAGCATAACCTTCATACTTTCAGCACTCCTGAAAACTCTCTTTTAAGTTACGACTCTTCAGCAAATTCAGGGGAAGAAGACGACGAAGAAGACGACGAAGAAGACGAAGCCGGGAGGAATTTGATTTGA

Protein sequence

MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQLAGARDEHNLHTFSTPENSLLSYDSSANSGEEDDEEDDEEDEAGRNLI

Homology

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BLAST of CmoCh06G000750.1 vs. ExPASy Swiss-Prot
Match: Q3EAI1 (Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.5e-66
Identity = 198/407 (48.65%), Postives = 242/407 (59.46%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLM-TIPSEN-ASSFTALLELPATQAL 60
           M++  G    S  +G      GLES    +E + L+ T+P EN   SFTALLELP TQA+
Sbjct: 1   MDLTGGFGARSGGVGPCREPIGLESLHLGDEFRQLVTTLPPENPGGSFTALLELPPTQAV 60

Query: 61  ELLHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEH-- 120
           ELLH  DS+   +  +V     ++P P  S     L FP+NS L E  A+FSV+A E   
Sbjct: 61  ELLHFTDSSS-SQQAAVTGIGGEIPPPLHS-FGGTLAFPSNSVLMERAARFSVIATEQQN 120

Query: 121 ---SPET-TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVEN-----NTNQRS 180
              S ET TSSVP NSS +L++VK EP  ETDS+       ISD  +EN     N N R+
Sbjct: 121 GNISGETPTSSVPSNSSANLDRVKTEPA-ETDSSQR----LISDSAIENQIPCPNQNNRN 180

Query: 181 VKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMK 240
            KRK+ EKKGK S+K  KN+S E+ EKLPYVHVRA RGQATD HSLAERARREKINARMK
Sbjct: 181 GKRKDFEKKGKSSTK--KNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMK 240

Query: 241 LLQELVPGCNKVSSLRS-------YAVFIII----KCSLI---QSVELYYDFSLI---IS 300
           LLQELVPGC+K +           + V +++    K ++     S E   D S     I 
Sbjct: 241 LLQELVPGCDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQ 300

Query: 301 GTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVTP 360
           GTALVLDEIINHVQSLQRQVE LSMRLAAVNPR+DFN+D+ILA+EN  + + +       
Sbjct: 301 GTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQ 360

Query: 361 LMWS----EISPSGSRQQYQ----QQWHFDAAVVNQLAGARDEHNLH 370
           L W     E   S   +Q Q    QQW FD   +NQ    R+E   H
Sbjct: 361 LAWPQQAIETEQSFHHRQLQQPPTQQWPFDG--LNQPVWGREEDQAH 396

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy Swiss-Prot
Match: Q8VZ02 (Transcription factor bHLH48 OS=Arabidopsis thaliana OX=3702 GN=BHLH48 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.9e-60
Identity = 169/358 (47.21%), Postives = 205/358 (57.26%), Query Frame = 0


Query: 22  GLESHQFCEEIQGLMTI--PSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHYRV 81
           GLES  F +E + L+T   P     SFTALLE+P TQA+ELLH PDS+  +        +
Sbjct: 19  GLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDI 78

Query: 82  KDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEH----SPETTSSVPLNSSVSLEKV 141
                  F A    LTFP+NS L +  A+FSV+A E     S ET +S+P N   +L++V
Sbjct: 79  SPTTLHPFGA----LTFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRV 138

Query: 142 KNEPTIETDSNPNHLYPKISDPTVEN-NTNQRSVKRKEREKKGKGSSKKSKNESQEDAEK 201
           K EP  ETDS             VEN N +  S KRKEREKK K S+K  KN+S  +++K
Sbjct: 139 KAEPA-ETDS------------MVENQNQSYSSGKRKEREKKVKSSTK--KNKSSVESDK 198

Query: 202 LPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCS 261
           LPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGC+K                
Sbjct: 199 LPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDK---------------- 258

Query: 262 LIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAA 321
                         I GTALVLDEIINHVQ+LQRQVE LSMRLAAVNPR+DFN+DSILA+
Sbjct: 259 --------------IQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILAS 312

Query: 322 ENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQLAGARDEHNLHTFS 373
           EN  + + +               +       QQW FD     +  G  ++H+   FS
Sbjct: 319 ENGSLMDGSF--------------NAESYHQLQQWPFDGYHQPEW-GREEDHHQANFS 312

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-26
Identity = 98/265 (36.98%), Postives = 133/265 (50.19%), Query Frame = 0


Query: 86  YFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPETTSSVPL-------NSSVSLEKVKNE 145
           Y S    NL         E D++ S+     SPETT              +    + K +
Sbjct: 55  YLSTAGLNLPMMYGETTVEGDSRLSI-----SPETTLGTGNFKKRKFDTETKDCNEKKKK 114

Query: 146 PTIETDSNPNHLYPKISDPTVENNTNQRSVKR-KEREKKGKGSSKKSKNESQEDAEKLPY 205
            T+  D        + S  T +NN + +S+K+ K + KK + +     ++  ++ EK  Y
Sbjct: 115 MTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDY 174

Query: 206 VHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCSLIQ 265
           +HVRA RGQATD HS+AER RREKI+ RMK LQ+LVPGC+K                   
Sbjct: 175 IHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDK------------------- 234

Query: 266 SVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAE-- 325
                      I+G A +LDEIIN+VQSLQRQ+EFLSM+LA VNPR DF++D I A E  
Sbjct: 235 -----------ITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVA 284

Query: 326 NEPVHESNLPTMVTPLMWSEISPSG 341
           + P+     P MV      E+  SG
Sbjct: 295 STPMTVVPSPEMVLSGYSHEMVHSG 284

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.2e-26
Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 155 SDPTVENNTNQRSVKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLA 214
           S  + E    +R  +  + E++G+G   KS N    +  K  Y+HVRA RGQATD HSLA
Sbjct: 257 SKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLA 316

Query: 215 ERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTAL 274
           ER RREKI  RMKLLQ+LVPGCNKV                              +G AL
Sbjct: 317 ERVRREKIGERMKLLQDLVPGCNKV------------------------------TGKAL 376

Query: 275 VLDEIINHVQSLQRQVEFLSMRLAAVN-PRVDFNIDSILA------AENEPVHESNL 325
           +LDEIIN+VQSLQRQVEFLSM+L++VN  R+DFN+D++++      + N  +HE  L
Sbjct: 377 MLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGL 402

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-25
Identity = 92/237 (38.82%), Postives = 122/237 (51.48%), Query Frame = 0


Query: 104 EHDAKFSVV-AEEHSPETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENN 163
           E  A+FS   +   +  T S  P+N+   +    NE      S+P    P  S      +
Sbjct: 143 ERAARFSCFGSRSFNSRTNSPFPINNEPPI--TTNEKMPRVSSSP-VFKPLASHVPAGES 202

Query: 164 TNQRSVKRKEREKKGKGSSKKSKNESQEDAEKLP---------------------YVHVR 223
           + + S KRK + K+   S+  S  E +E  +  P                     Y+HVR
Sbjct: 203 SGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVR 262

Query: 224 AGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCSLIQSVEL 283
           A RGQATD HSLAER RREKI+ RMKLLQ+LVPGCNKV                      
Sbjct: 263 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV---------------------- 322

Query: 284 YYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEP 319
                   +G AL+LDEIIN+VQSLQRQVEFLSM+L++VN R+DFN+D++L+ +  P
Sbjct: 323 --------TGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP 346

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy TrEMBL
Match: A0A6J1EUQ6 (transcription factor bHLH48-like OS=Cucurbita moschata OX=3662 GN=LOC111438040 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.6e-190
Identity = 357/387 (92.25%), Postives = 357/387 (92.25%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL 60
           MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL
Sbjct: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL 60

Query: 61  LHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPET 120
           LHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPET
Sbjct: 61  LHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPET 120

Query: 121 TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGKGS 180
           TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGKGS
Sbjct: 121 TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGKGS 180

Query: 181 SKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVS 240
           SKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK  
Sbjct: 181 SKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK-- 240

Query: 241 SLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAV 300
                                       ISGTALVLDEIINHVQSLQRQVEFLSMRLAAV
Sbjct: 241 ----------------------------ISGTALVLDEIINHVQSLQRQVEFLSMRLAAV 300

Query: 301 NPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQLA 360
           NPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQLA
Sbjct: 301 NPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQLA 357

Query: 361 GARDEHNLHTFSTPENSLLSYDSSANS 388
           GARDEHNLHTFSTPENSLLSYDSSANS
Sbjct: 361 GARDEHNLHTFSTPENSLLSYDSSANS 357

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy TrEMBL
Match: A0A0A0LEI6 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810530 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.8e-149
Identity = 300/389 (77.12%), Postives = 317/389 (81.49%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL 60
           MEI+VGTVGGSSPIGRQ + TGLES QFCEEIQGLMTIP+ENASSFTALLELPATQALEL
Sbjct: 1   MEIKVGTVGGSSPIGRQSDDTGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALEL 60

Query: 61  LHSPDS--AEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSP 120
           LHSPDS  A V  DDSVH+ +KDVPKPYFSA NCNLTFPTNS L E   K SV+A+EHSP
Sbjct: 61  LHSPDSATAAVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSVLAKEHSP 120

Query: 121 ETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGK 180
           ETTSSVPLNSSV+LEKVKNEPT +TDSNPN L   ISDPTVE NTNQRS KRKEREKKG+
Sbjct: 121 ETTSSVPLNSSVNLEKVKNEPTTDTDSNPNPLQTLISDPTVE-NTNQRSAKRKEREKKGR 180

Query: 181 GSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK 240
           GS+KKSKNES EDAEKLPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGCNK
Sbjct: 181 GSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 240

Query: 241 VSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLA 300
                                         ISGTALVLDEIINHVQSLQRQVEFLSMRLA
Sbjct: 241 ------------------------------ISGTALVLDEIINHVQSLQRQVEFLSMRLA 300

Query: 301 AVNPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQ 360
           AVNPRVDFNI+SILA ENEP+ ESN PTMV+PLMW EI  +G+RQQYQ QWHFD + VN 
Sbjct: 301 AVNPRVDFNIESILATENEPILESNFPTMVSPLMWPEIPVNGTRQQYQPQWHFDGS-VNH 357

Query: 361 LAGARDEHNLHTFSTPENSLLSYDSSANS 388
              ARDEHN H FS PENSLLSYDSSANS
Sbjct: 361 QGWARDEHNHHNFSPPENSLLSYDSSANS 357

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy TrEMBL
Match: A0A5D3DPK9 (Transcription factor bHLH48 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005680 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 7.8e-148
Identity = 297/389 (76.35%), Postives = 315/389 (80.98%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL 60
           MEI+VGTVGGSS IGRQ + TGLES QFCEEIQGLMTIP+ENASSFTALLELPATQALEL
Sbjct: 1   MEIKVGTVGGSSTIGRQSDDTGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALEL 60

Query: 61  LHSPDS--AEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSP 120
           LHSPDS  A V  DDSVH+ +KDVPKPYFSA NCNLTFPTNS L E   K S++A+EHSP
Sbjct: 61  LHSPDSAAAAVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSILAKEHSP 120

Query: 121 ETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGK 180
           ETTSSVPLNSSV+ EKVKNEPT +TDSNPN L   ISDP VE NTNQRS KRKEREKKG+
Sbjct: 121 ETTSSVPLNSSVNFEKVKNEPTTDTDSNPNPLQTLISDPKVE-NTNQRSAKRKEREKKGR 180

Query: 181 GSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK 240
           GS+KKSKNES EDAEKLPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGCNK
Sbjct: 181 GSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 240

Query: 241 VSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLA 300
                                         ISGTALVLDEIINHVQSLQRQVEFLSMRLA
Sbjct: 241 ------------------------------ISGTALVLDEIINHVQSLQRQVEFLSMRLA 300

Query: 301 AVNPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQ 360
           AVNPRVDFNI+SILA ENEP+ ESN PTMV+PLMW EI  +G+RQQYQ QWHFD + VNQ
Sbjct: 301 AVNPRVDFNIESILATENEPILESNFPTMVSPLMWPEIPVNGTRQQYQPQWHFDGS-VNQ 357

Query: 361 LAGARDEHNLHTFSTPENSLLSYDSSANS 388
              ARDEHN H FS PENSLLSYDSSANS
Sbjct: 361 QGWARDEHNHHNFSPPENSLLSYDSSANS 357

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy TrEMBL
Match: A0A1S3B815 (transcription factor bHLH48 OS=Cucumis melo OX=3656 GN=LOC103486793 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 7.8e-148
Identity = 297/389 (76.35%), Postives = 315/389 (80.98%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL 60
           MEI+VGTVGGSS IGRQ + TGLES QFCEEIQGLMTIP+ENASSFTALLELPATQALEL
Sbjct: 1   MEIKVGTVGGSSTIGRQSDDTGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALEL 60

Query: 61  LHSPDS--AEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSP 120
           LHSPDS  A V  DDSVH+ +KDVPKPYFSA NCNLTFPTNS L E   K S++A+EHSP
Sbjct: 61  LHSPDSAAAAVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSILAKEHSP 120

Query: 121 ETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGK 180
           ETTSSVPLNSSV+ EKVKNEPT +TDSNPN L   ISDP VE NTNQRS KRKEREKKG+
Sbjct: 121 ETTSSVPLNSSVNFEKVKNEPTTDTDSNPNPLQTLISDPKVE-NTNQRSAKRKEREKKGR 180

Query: 181 GSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK 240
           GS+KKSKNES EDAEKLPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGCNK
Sbjct: 181 GSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 240

Query: 241 VSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLA 300
                                         ISGTALVLDEIINHVQSLQRQVEFLSMRLA
Sbjct: 241 ------------------------------ISGTALVLDEIINHVQSLQRQVEFLSMRLA 300

Query: 301 AVNPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQ 360
           AVNPRVDFNI+SILA ENEP+ ESN PTMV+PLMW EI  +G+RQQYQ QWHFD + VNQ
Sbjct: 301 AVNPRVDFNIESILATENEPILESNFPTMVSPLMWPEIPVNGTRQQYQPQWHFDGS-VNQ 357

Query: 361 LAGARDEHNLHTFSTPENSLLSYDSSANS 388
              ARDEHN H FS PENSLLSYDSSANS
Sbjct: 361 QGWARDEHNHHNFSPPENSLLSYDSSANS 357

[Close]

BLAST of CmoCh06G000750.1 vs. ExPASy TrEMBL
Match: A0A6J1DL95 (transcription factor bHLH48-like OS=Momordica charantia OX=3673 GN=LOC111021563 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 3.2e-141
Identity = 297/393 (75.57%), Postives = 311/393 (79.13%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLMTIPSENASSFTALLELPATQALEL 60
           MEI+ GTV GSSPIGRQ + TGLES QFCEEIQGLMTIP+ENASSFTALLELPATQALEL
Sbjct: 1   MEIKAGTVAGSSPIGRQSDDTGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALEL 60

Query: 61  LHSPDS-----AEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEE 120
           LHSPDS     A V  D+++      VPKPYFSA   NLTFP +S L E  AK SV+A E
Sbjct: 61  LHSPDSGGGATAAVATDEAI------VPKPYFSAFGSNLTFPADSALIERAAKLSVLAGE 120

Query: 121 HSPETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREK 180
           HSPETTSSVPLNSSV+LEKVKNEPT E+DSNPN L   ISDPTVE N NQRS KRKEREK
Sbjct: 121 HSPETTSSVPLNSSVNLEKVKNEPTTESDSNPNPLQTLISDPTVE-NANQRSAKRKEREK 180

Query: 181 KGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPG 240
           KGKGSSKKSKNES EDAEKLPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPG
Sbjct: 181 KGKGSSKKSKNESLEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 240

Query: 241 CNKVSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSM 300
           C+K                              ISGTALVLDEIINHVQSLQRQVEFLSM
Sbjct: 241 CDK------------------------------ISGTALVLDEIINHVQSLQRQVEFLSM 300

Query: 301 RLAAVNPRVDFNIDSILAAENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQ-QWHFDAA 360
           RLAAVNPRVDFNIDSILAAENEPV ES+ P+MVTPLMW EI  SG+RQQYQQ QWHFDAA
Sbjct: 301 RLAAVNPRVDFNIDSILAAENEPVLESSFPSMVTPLMWPEIPLSGNRQQYQQPQWHFDAA 355

Query: 361 VVNQLAGARDEHNLHTFSTPENSLLSYDSSANS 388
            VNQ A  RDEHN H FSTPENSLLSYDSSANS
Sbjct: 361 -VNQQAWVRDEHNHHNFSTPENSLLSYDSSANS 355

[Close]

BLAST of CmoCh06G000750.1 vs. TAIR 10
Match: AT3G57800.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 3.5e-68
Identity = 192/390 (49.23%), Postives = 229/390 (58.72%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLM-TIPSEN-ASSFTALLELPATQAL 60
           M++  G    S  +G      GLES    +E + L+ T+P EN   SFTALLELP TQA+
Sbjct: 1   MDLTGGFGARSGGVGPCREPIGLESLHLGDEFRQLVTTLPPENPGGSFTALLELPPTQAV 60

Query: 61  ELLHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEH-- 120
           ELLH  DS+   +  +V     ++P P  S     L FP+NS L E  A+FSV+A E   
Sbjct: 61  ELLHFTDSSS-SQQAAVTGIGGEIPPPLHS-FGGTLAFPSNSVLMERAARFSVIATEQQN 120

Query: 121 ---SPET-TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVEN-----NTNQRS 180
              S ET TSSVP NSS +L++VK EP  ETDS+       ISD  +EN     N N R+
Sbjct: 121 GNISGETPTSSVPSNSSANLDRVKTEPA-ETDSSQR----LISDSAIENQIPCPNQNNRN 180

Query: 181 VKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMK 240
            KRK+ EKKGK S+K  KN+S E+ EKLPYVHVRA RGQATD HSLAERARREKINARMK
Sbjct: 181 GKRKDFEKKGKSSTK--KNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMK 240

Query: 241 LLQELVPGCNKVSSLRSYAVFIIIKCSLIQSVELYYDFSLIISGTALVLDEIINHVQSLQ 300
           LLQELVPGC+K                              I GTALVLDEIINHVQSLQ
Sbjct: 241 LLQELVPGCDK------------------------------IQGTALVLDEIINHVQSLQ 300

Query: 301 RQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVTPLMWS----EISPSGSRQ 360
           RQVE LSMRLAAVNPR+DFN+D+ILA+EN  + + +       L W     E   S   +
Sbjct: 301 RQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAIETEQSFHHR 349

Query: 361 QYQ----QQWHFDAAVVNQLAGARDEHNLH 370
           Q Q    QQW FD   +NQ    R+E   H
Sbjct: 361 QLQQPPTQQWPFDG--LNQPVWGREEDQAH 349

[Close]

BLAST of CmoCh06G000750.1 vs. TAIR 10
Match: AT3G57800.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-67
Identity = 198/407 (48.65%), Postives = 242/407 (59.46%), Query Frame = 0


Query: 1   MEIEVGTVGGSSPIGRQFNYTGLESHQFCEEIQGLM-TIPSEN-ASSFTALLELPATQAL 60
           M++  G    S  +G      GLES    +E + L+ T+P EN   SFTALLELP TQA+
Sbjct: 1   MDLTGGFGARSGGVGPCREPIGLESLHLGDEFRQLVTTLPPENPGGSFTALLELPPTQAV 60

Query: 61  ELLHSPDSAEVKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEH-- 120
           ELLH  DS+   +  +V     ++P P  S     L FP+NS L E  A+FSV+A E   
Sbjct: 61  ELLHFTDSSS-SQQAAVTGIGGEIPPPLHS-FGGTLAFPSNSVLMERAARFSVIATEQQN 120

Query: 121 ---SPET-TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPTVEN-----NTNQRS 180
              S ET TSSVP NSS +L++VK EP  ETDS+       ISD  +EN     N N R+
Sbjct: 121 GNISGETPTSSVPSNSSANLDRVKTEPA-ETDSSQR----LISDSAIENQIPCPNQNNRN 180

Query: 181 VKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMK 240
            KRK+ EKKGK S+K  KN+S E+ EKLPYVHVRA RGQATD HSLAERARREKINARMK
Sbjct: 181 GKRKDFEKKGKSSTK--KNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMK 240

Query: 241 LLQELVPGCNKVSSLRS-------YAVFIII----KCSLI---QSVELYYDFSLI---IS 300
           LLQELVPGC+K +           + V +++    K ++     S E   D S     I 
Sbjct: 241 LLQELVPGCDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQ 300

Query: 301 GTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVTP 360
           GTALVLDEIINHVQSLQRQVE LSMRLAAVNPR+DFN+D+ILA+EN  + + +       
Sbjct: 301 GTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQ 360

Query: 361 LMWS----EISPSGSRQQYQ----QQWHFDAAVVNQLAGARDEHNLH 370
           L W     E   S   +Q Q    QQW FD   +NQ    R+E   H
Sbjct: 361 LAWPQQAIETEQSFHHRQLQQPPTQQWPFDG--LNQPVWGREEDQAH 396

[Close]

BLAST of CmoCh06G000750.1 vs. TAIR 10
Match: AT2G42300.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 4.2e-61
Identity = 169/358 (47.21%), Postives = 205/358 (57.26%), Query Frame = 0


Query: 22  GLESHQFCEEIQGLMTI--PSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHYRV 81
           GLES  F +E + L+T   P     SFTALLE+P TQA+ELLH PDS+  +        +
Sbjct: 19  GLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDI 78

Query: 82  KDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEH----SPETTSSVPLNSSVSLEKV 141
                  F A    LTFP+NS L +  A+FSV+A E     S ET +S+P N   +L++V
Sbjct: 79  SPTTLHPFGA----LTFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRV 138

Query: 142 KNEPTIETDSNPNHLYPKISDPTVEN-NTNQRSVKRKEREKKGKGSSKKSKNESQEDAEK 201
           K EP  ETDS             VEN N +  S KRKEREKK K S+K  KN+S  +++K
Sbjct: 139 KAEPA-ETDS------------MVENQNQSYSSGKRKEREKKVKSSTK--KNKSSVESDK 198

Query: 202 LPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCS 261
           LPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGC+K                
Sbjct: 199 LPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDK---------------- 258

Query: 262 LIQSVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAA 321
                         I GTALVLDEIINHVQ+LQRQVE LSMRLAAVNPR+DFN+DSILA+
Sbjct: 259 --------------IQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILAS 312

Query: 322 ENEPVHESNLPTMVTPLMWSEISPSGSRQQYQQQWHFDAAVVNQLAGARDEHNLHTFS 373
           EN  + + +               +       QQW FD     +  G  ++H+   FS
Sbjct: 319 ENGSLMDGSF--------------NAESYHQLQQWPFDGYHQPEW-GREEDHHQANFS 312

[Close]

BLAST of CmoCh06G000750.1 vs. TAIR 10
Match: AT2G42300.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 3.3e-42
Identity = 120/227 (52.86%), Postives = 144/227 (63.44%), Query Frame = 0


Query: 22  GLESHQFCEEIQGLMTI--PSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHYRV 81
           GLES  F +E + L+T   P     SFTALLE+P TQA+ELLH PDS+  +        +
Sbjct: 19  GLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDI 78

Query: 82  KDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEH----SPETTSSVPLNSSVSLEKV 141
                  F A    LTFP+NS L +  A+FSV+A E     S ET +S+P N   +L++V
Sbjct: 79  SPTTLHPFGA----LTFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRV 138

Query: 142 KNEPTIETDSNPNHLYPKISDPTVEN-NTNQRSVKRKEREKKGKGSSKKSKNESQEDAEK 201
           K EP  ETDS             VEN N +  S KRKEREKK K S+K  KN+S  +++K
Sbjct: 139 KAEPA-ETDS------------MVENQNQSYSSGKRKEREKKVKSSTK--KNKSSVESDK 198

Query: 202 LPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSS 242
           LPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGC+KV S
Sbjct: 199 LPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKVYS 226

[Close]

BLAST of CmoCh06G000750.1 vs. TAIR 10
Match: AT4G34530.1 (cryptochrome-interacting basic-helix-loop-helix 1 )

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-27
Identity = 98/265 (36.98%), Postives = 133/265 (50.19%), Query Frame = 0


Query: 86  YFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPETTSSVPL-------NSSVSLEKVKNE 145
           Y S    NL         E D++ S+     SPETT              +    + K +
Sbjct: 55  YLSTAGLNLPMMYGETTVEGDSRLSI-----SPETTLGTGNFKKRKFDTETKDCNEKKKK 114

Query: 146 PTIETDSNPNHLYPKISDPTVENNTNQRSVKR-KEREKKGKGSSKKSKNESQEDAEKLPY 205
            T+  D        + S  T +NN + +S+K+ K + KK + +     ++  ++ EK  Y
Sbjct: 115 MTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDY 174

Query: 206 VHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKVSSLRSYAVFIIIKCSLIQ 265
           +HVRA RGQATD HS+AER RREKI+ RMK LQ+LVPGC+K                   
Sbjct: 175 IHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDK------------------- 234

Query: 266 SVELYYDFSLIISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAE-- 325
                      I+G A +LDEIIN+VQSLQRQ+EFLSM+LA VNPR DF++D I A E  
Sbjct: 235 -----------ITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVA 284

Query: 326 NEPVHESNLPTMVTPLMWSEISPSG 341
           + P+     P MV      E+  SG
Sbjct: 295 STPMTVVPSPEMVLSGYSHEMVHSG 284

The following BLAST results are available for this feature:

BLAST of CmoCh06G000750.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EAI1	5.5e-66	48.65	Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1	[more]
Q8VZ02	5.9e-60	47.21	Transcription factor bHLH48 OS=Arabidopsis thaliana OX=3702 GN=BHLH48 PE=2 SV=1	[more]
Q8GY61	2.5e-26	36.98	Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1	[more]
Q9FJL4	7.2e-26	45.20	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]
Q9SRT2	2.8e-25	38.82	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]

BLAST of CmoCh06G000750.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUQ6	1.6e-190	92.25	transcription factor bHLH48-like OS=Cucurbita moschata OX=3662 GN=LOC111438040 P...	[more]
A0A0A0LEI6	1.8e-149	77.12	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810530 PE=4 S...	[more]
A0A5D3DPK9	7.8e-148	76.35	Transcription factor bHLH48 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B815	7.8e-148	76.35	transcription factor bHLH48 OS=Cucumis melo OX=3656 GN=LOC103486793 PE=4 SV=1	[more]
A0A6J1DL95	3.2e-141	75.57	transcription factor bHLH48-like OS=Momordica charantia OX=3673 GN=LOC111021563 ...	[more]

BLAST of CmoCh06G000750.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57800.2	3.5e-68	49.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G57800.1	3.9e-67	48.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G42300.1	4.2e-61	47.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G42300.2	3.3e-42	52.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G34530.1	1.8e-27	36.98	cryptochrome-interacting basic-helix-loop-helix 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..406
None	No IPR available	PANTHER	PTHR12565:SF112	TRANSCRIPTION FACTOR BHLH60	coord: 21..389
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 196..311 e-value: 6.55924E-51 score: 164.152
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 212..292 e-value: 9.1E-4 score: 28.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 210..235 e-value: 1.2E-4 score: 22.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 206..286 score: 12.487064
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 203..306 e-value: 2.0E-10 score: 42.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 204..305
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 21..389

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh06G000750	CmoCh06G000750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000750.1:exon:8480	CmoCh06G000750.1:exon:8480	exon
CmoCh06G000750.1:exon:8479	CmoCh06G000750.1:exon:8479	exon
CmoCh06G000750.1:exon:8478	CmoCh06G000750.1:exon:8478	exon
CmoCh06G000750.1:exon:8477	CmoCh06G000750.1:exon:8477	exon
CmoCh06G000750.1:exon:8476	CmoCh06G000750.1:exon:8476	exon
CmoCh06G000750.1:exon:8475	CmoCh06G000750.1:exon:8475	exon
CmoCh06G000750.1:exon:8474	CmoCh06G000750.1:exon:8474	exon
CmoCh06G000750.1:exon:8473	CmoCh06G000750.1:exon:8473	exon
CmoCh06G000750.1:exon:8472	CmoCh06G000750.1:exon:8472	exon
CmoCh06G000750.1:exon:8471	CmoCh06G000750.1:exon:8471	exon
CmoCh06G000750.1:exon:8470	CmoCh06G000750.1:exon:8470	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000750.1:three_prime_utr	CmoCh06G000750.1:three_prime_utr_4	three_prime_UTR
CmoCh06G000750.1:three_prime_utr	CmoCh06G000750.1:three_prime_utr_3	three_prime_UTR
CmoCh06G000750.1:three_prime_utr	CmoCh06G000750.1:three_prime_utr_2	three_prime_UTR
CmoCh06G000750.1:three_prime_utr	CmoCh06G000750.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_8	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_7	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_6	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_5	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_4	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_3	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds_2	CDS
CmoCh06G000750.1:cds	CmoCh06G000750.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000750.1:five_prime_utr	CmoCh06G000750.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000750.1	CmoCh06G000750.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	DNA-binding transcription factor activity