CmoCh06G000560.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000560.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	myb family transcription factor PHL7-like
Location	Cmo_Chr06: 349595 .. 359369 (-)
Sequence length	1803
RNA-Seq Expression	CmoCh06G000560.1
Synteny	CmoCh06G000560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAAATGGCAACAATAGCAAACAGTTAGCTCACATTCAACACACGAGACTATCAACAACCAATCAGAAAAACAAACCGGAAAGAACAGCCCGTAGTGAATACCAACAGGGCAAGGGAGTAATCAACGCATGAAACAAGCAACAAGTCGTTTTTATAGTGAGAAGAAAGACGGATGGAGATCGGGAGTATACCAGTAATGACAATAGAGTAGAAAGTCGCGGGAAGCTGCGATACCACGATCGGAATAAAGACGGCGGCGAAACTGATCTGCGGGAGAAGGAGATGAAGACGGTGTGGGTTTAGGGTTCCTCTTTCTTTTATTTTATTTATTTATATAGTGGGCTGGGTTTTAATGGGCTTTATGATTGGACACAATTTTTTTCACATAGTGGGTTGGGTTTTATTGGGCTTTATGATTGGACAATTTTTTAATATAGTGGGCTGGGTTTCTTGGGCTGGGTCCTATTGGGCTTTTTATTGGACAATTTTTAATATAGTGGGCTGGGTCCTATTGGGCTTTTTGATTGGACAATTTTTCATATAGTGAGCTGGATTTTATTGGGCTTTATGATTGGACAATTTTTAATATAGTGGGCTGGGTTCTATTGGGCTGGGTCCTATTGGGCTTTTTGATTGGACAATTTTTCATATAGTGGGCTGGGTTCTATTGGGCTGGGTCCTATTGGGCTTTTTGATTGGACAATTTTTCATATAGTGGGCTGGGTTGTATTGGGCTTTATGATTGGACAGTTTTTAATATAGTGGGCTGGGTCCTATTGGGCTTTTTGATTGGACAATTTTTCATATAGTGGGCTGGGTTTTATTGGGCTTTATGATTGGACAATTTTTCATATAGTGGGCTGGGTTCTATTGGGCTTTATCATTGGACACAATTTTTCATATAGTGGGCTGGGTTTTATTGGGCTGATGATTGGTCACAATTTTTATTGGGCATCCTCTTGTACCCGGTTTCGTGGTGGGACCCACATTGTGACCCGAGATGCTATATAAATATCGCCGTCCTTTGTACGCTATGACACAATTAAAACTCCGTCTTTTATTATTTATCTATTTATTTGTTTGTTTTTGTATTTAAATAAATAAAAGGAGCAAAAAAGAATTAAAAAATAAACAAAAGGAGAGAGAAGAAGAAGAGAGAGAAGAAGAAGAGAGAGAAAGAGCTTCGTCCGGTCCTGACGAACCATCTTGCCAAAATCAGAATTCTTACTCTCTTGTCTTCCTTTCTCAAACCCTAAAACGGACAAATTCCAATTCCAGTTTGCTCCCCGGAGACCGGCTACCTGCCACCGTGTTCCACCACCACCGTCGCCGCCGCCGCCACACACTTCTACTCAAACCACTTGATCGTTGCCTCGACTTCGAAATTCATCGTCGGCTGCGTTTGCCCCCTAAAATTTGGAGATTTTGTTGTGTTTCTGTTGACTTTGGAGGTGATGGTTCTGAAGCTAATTCACCCGCCATCATCGTCCTTCTGAGTCCATTCCAGGTGTTGCATAGTTCATTAACTTCGTAGATTCTTGTTAGCTTACTCTTAATTTTGCTTCTTAATTATGCTGGGATTATCTGGGTTTTTATTTTATTTTATTTACTTAGTATTGCTTCTTTCAATAATATTTTCATCCATTGAATTGAAAGACGGTTTTTTAAGCATTTTGAAGCCGTGTAGCGTGAAGTGCATGGATCTTATTTTTCTAATTTTTGTTGCTGTGTGATTTGGAGCATTTCTTGTGACTTAAAATTGAATTTCATGTTATGTCTTAACAGACACAGAGCAATTGTTTTGTTGTGAATTTGAGAGATGGGTTCGATTGATTTTTTTGTTGTTGTTGGAGTATTGATAAGCTGTCATGTAAAATCCTATCCAGTTATCATTTCTGTGAAGCTGCTGAAGTAGATTATAATTTTTCGCAGGAATTTTTTTCAAGTTGTTTCTCCGCATCATGTATCATGCTAAGAAATTTTCAACTGCGAGCTTAGTTCCACATAAATCTCAAGGTGCCGAACAAAGTGCAAGTGTTGCGGTTCTTGGTGGATCTACAGCCAAAAGTCCAATGCCACCTGGGGGAGGTGGAAAACAACGGTTGCGATGGACATCTGATCTTCACGACCGTTTTGTGGATGCCATCACACAACTTGGTGGACCAGATAGTGGGTATTTTCTTTTTAGTAATGTTATTGTGCATTTTCTTTCATCTTAATTTTCAGGATTAGAAAAGGGGAAAATATTGAATGAAGCCATGCAACAATTTCTTCTCCGTACTAGCTTGATTAAATGTGGTTGTATGCACATTTGTAGGCTAGATGTTTCTATTTGATGAGTTCAAGGGGGTTTGAAATGAAGTAGTGTAGTAGAAGAGTTTACAAGGCACAACTCGGAAGTTGATATACGTATAGTCTTGAGTATTAAATGTGGTTCTATGGTCCTATGTTGAGGGGCTTGAGGTGTGCGCAAATTTGGTCCGGAGACTTGCCAGATGCCTTTATTTTTATGTTACAAAGCCACAAGAAACCATGAATTAGGGGAAAAAAGGAGTGCATGCTTACATTCTTGTGTTACCAAGATCCCTAGGGGATTGAAAAGCATTCTTCTAGGTCATTTATTATTGTAAATGCTATCAGTATTACTTTGGTAAGAAACAACTCCCCCTATATGTAATAATGCTTCACTAGTACTGAGCTTATGAAAAGCTATCGTATGGTATCAACAAGGAAGGAAACTAGCTACAAAATATAGGTTTCTGTAAGAGGAGAGTAATCTTGGCGTTGATGAAGCATTGTTTGCATTGGAATATGTTTATGAGATAACTTTTAACTTTTACTTTTCTGGCCTTGTACACATCATGAATGTTATCTTTTTTTATGTCATCTCAATCCTTCTGGCAATATTGCAAAGCCATCCTTACATCTTGTTAGGAGAAAACTAGCTTTGAAGTAGGATACATCATGAATGTTGTCTTTTTTTATGTCATCTCAATCCTTCTGGCAATATTGCAAAGCCATCCTTACATCTTGTTAGGAGAAAACTAGCTCTGAAGTAGGATAGAGTAAATGTATCCATGTCGAAAAGTGAACTTTATCAATTGACCACCACAACCAGTTCGCAAAAAAGTAATGATATTAGAATGATAAAATATAACTTATATTCTTAAACGTATAATTATATTTACAAAGAAGATTTTTAGCTTTTCTTTTCATACAATATAACTGAACAAAAAGGAAGAAATTCGTTCAGAAAATGAAATCAGGAAGAAAAGCGGGAAGAAAAACTCCAGTCCAAAAGAAATTACTGAACTGAGAGAAGTTATACTGCAATAAAAGAGAAGTCCTAAGCTTGCACCAAGTGGAAACCACAAAAAGTATTCCATCCAACAAAAATGAACTTTTTTTTTTCTGTTACTTTCGCTCTGAAAAGTCCCTTAGAGTGTGCTTCTAGTATTCGACCAAAGAGACCTTTCTTTGTCTTTAAGGGCTGTTCATCAAAGAAGAAATAAAGAAGGCTTGATATATCCTTATAAATTGGGGCCATCCATCCAAAAGAATTGGTTAGGTTGAGCCTAAAACGGGACAAAAGGGTGATTATAAAAGGAGAGAAAGGAAGGGTGGCATGTAAGCTGTTTGCATAAAAGTAATATAGTACTTTCACGTTAGATTATCCACCTATATATTCTACTTAATGGGATATCTAGGAGTCGAGTCTACCAATGGTCAAAGAGCTCCGGGGATTTTTTTTTTTTGGGGGGGGGGGGGGGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTGGGGGGGGGGGGAGGTACAATACCCAAGATGTTCTGCAAAAGCGTTTCCCCAATCTGGCCATCTCTCCAAATTGCTATATTGTGCATATAAAATCTTCGAATCATAGGAGCATCTCTTCATTTCCTGTCTCAGCATGCGAACAGGTTCTGGCTGACCACCCCCCCCCACTGTACATGAAAAAGTCAATCTTCTCCATACTTTCCTTGCTGACCATCCTTTCAAAAAGGAGAAATCAATCTTTTGAATCCAATTGAACAAAGCTTTCCTTTGGGCTCGTTGGAGGGAAATGAACAATAGAATCTTCAACAGAAAACTTCATACCATTGAAATCTTCATGTTTTTGTCAATGTACCTTGGTTGGTGGTTTTACTTTTTTACCATTCTTTTACAAATTATAGTCTTAATAATCTCCTGATTAACTGTTTTTTTTTTCTTCGCAATCCTCAGTTACTTGGTGTTTTATTCGGTGTTTGTGTATTTCATCATATCAATGAGATATCTGTTTCTCGTTAGAAAAAAACTGCCTGTATGTAGGATGAGTTTTTGCTCGACCACTTGAAAGTAAAATATTGTCAGTTTAATCTATTTTTAGTCAATTGGATATTTGCATATTGCCACTCTTATACTCGAGTGCATTATCTTTGTAGTGTTAATGTCTTTACTTAAAGATGATGGATAGTTCACCAAAAAAATTCCCTTCCCATTTTCTTGTAGGGGCAACTCCCAAAGGGGTTTTAAGAGTAATGGGGGTACCTGGTCTTACCATATATCATGTCAAAAGCCATTTACAGGTAATTCCATTCAGTGAATTTATCATGCTGCAGATATTCCAAAAGTGGTAATATGAAGTTGATTGTATTTTTATTCTTTCAGAAGTATCGTCTTGCAAAGTATTTGCCAGAATCTCCAGCAGATGGTAAAGCAATCTTTTTATTGTTGTTTCATTCTTTTATCCAGCAACTACTACTTGTCTGTCTATTAAGTGTATTGATTTCACTTGGATTATCCCCTACTGGCGTGTAGGTTCTAAGGATGAAAAAAGAAGCTCAGAGAGTCTCTCTGGAACAGATTCATCTTCGTGAGTGCCCATTCCTATTTAGAAATACTCTTGTGACTGTCCTTCTTTTGTTCCACTTTATGACTTGCATCTTTCTATTTGTTTTTCCATCTTTAAGGGGCCTGCAAATCAATGAGGCATTGAGGATGCAAATGGAAGTTCAGAAACGTCTTCAAGAACAGCTCGAGGTTTGACCTTCCTCATCATTTACCACTCTTCCTCTTTCCCTTCCGGAAAATTTCAAATAATCTTTTCTTGTTGGATTTAAGTAGAGCATTTTGACAAAAGAGGGGGTGATCAAACACCATTTCCATGTAAAAAACGTAGGATATAGAGAATGAGTTCAAGCAGTTGTCTCAAGAGAATGAGTTCAAGCAGTTGTCTCAGAAGAATAGTCGAGTTGTATGCAAGCTAGTCAATATAGGTGACTAGTCTAGATAGTCATCGAGTATGATCATTTCTTGTTCTTTGTTTTTACCCATCAAGTTTACTGTTTGTTGTAAAGTATACCATTATAACCTAAAATGAGTTTTGTTTGCTTGAATCCCATATCAGGTTCAAAGGCAATTACAAATGAGAATAGAAGCACAGGCCAAATATTTGCAGAAGATCATTGAGGAGCAGCAGAAACTAGGCGGTGAATCAAAAGACACCGAGGCCTTGCCCTCGACTGAAGATAATAAGCAAAAAACATGCCAGTCTGAGTCATATAGCGATGTATCTGCAGAGCCTTCTTCTCCTCGAAAGAAACAACGTGTCGATCATGGAAGGACAGATGATTCTGCCCCATCTATTAATTTACCTTAACTTACCTGAATAAATTTGTGGTCGATAGGACCAAGAATTGTACGAAAGCAACATTGGTCGGGTTTACGTCGGAGTTGGAAATCAAGTCTCACGAGAGAAAAAGGTCGACCAGTTGCATCAAATGTATGTTTGAAGTTAAGATCGAATGGTAGTGTCGTCGTCTTCAAGAAGTTGATGAGGTCTGTAACATTTGTATATAAATGTGCACATTTAAACCTATTTGTAAACCCTATTGAAATACTCAGACGTAAGCAGTTTCACTCTACTTAGCTGTTCGATGCTTCACTTTTTCTTTATATAAATTCGTTTATATCTTAAATCGATTTTATAGAATCTATGCCTTTGTTTTTTAAAATTTACTAATTTATTAGATAAAATTGAATATAATTTATTTGACATAATCTAATAAATAAAAATATTTAATTTATAAATTTAGTCTATAGTTTTAGAGTATAGAATAAAAAAAAAATTGATTTTTTGATTTTTTTTTATTTCTGACAGATGGGAATGACAGGTCCACGTGGCAGCTTCTAATTTGTCAAAAATAGTAAAATAAGGCTTCAACCTGGCAAGAACAGAGAAGCCGAATTTGGGTAAGTAGATCAGAAAAAATTAGGGCTGTGATGGTCAATGGCGATATAAAACCCTGGACTCGACTCTCAGTTCTAAGCTCCCACATTACACCTTCTCTTTCCATTTCCATGGCTTCTTCTGAGAAGGAAGCGGCTCTTGCAGCCGTCCCCTCCGATTCCCCCACCATGTAAGCTTCTTCAAGCATCATCGTTTTGTTCTCTCTCTATTTGAACATTCTGTGTTTCAAGTTTTATAGCCCCTGCAATTGGTATTTTTTTGTGTTTCTTTTGCTGAGAATTAGTTCGTGATTAGTTTCATGGCTATTGGGTTATCAGGAAATGTGGTTGTTGATTTTTCTTATAGTTGTGTATTATATTGGCTGTTTGGTGCATTTAGCTCATCATCAAAGTTGAAGGCTAATCGTTCTATGCATGAGATGGAGTATTGGACATATCTATATTATTTATCTAGTGTTTATTATCGACAGGGAACACATTATTGTACCTTAGACTTAATAAATGATGAAATTTCATGAATTGAACCCTAAACTTAATAAATGATGAAATTTAATTTGTGATTATTTAAGTTTATATATACATTTTGAAGATCCGTGACTCAATTTGAGCACTTTTTTGGTTGGTGATACTGTTTTTATTTAATTGATTCTTTTTGTCATGACAGAATTCTTTTGAGCTCAATGATTCTTCTGGTTGACATGATTCATTTTAGCTCATTTTTTCGTTTTATTTTATTTTATTTTATTGAAACTCAGCACCTACTTCCTTAGTTTGGTAATTTTCATAGTTCAATTTTTGTACTTTTGTGGCTTGATCTCAAGTATTTTAAAATTGAACTTTTTACTCAGAAGACATTTTGTATATTAGGGAAGTAGCATCATTATTTATTTTACCTCTTTCCTTTTGGAGTTAGGTCTATACTCTCCTTTGAGAAGTCCCTGCCATTCTCTAATATAGAACCAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAATCATTACGTCTCATGAAAACCTATTTCATGTTGCTAGTAATGTTTTGGGTTTGTTACTTTTGCAGATTTGACAAAATCATTAACAAAGAAATTCCATCTACGGTGGTCTTTGAGGATGACAAGGTTCCTTTTCATTATTACTATATAGTTTGTATTATTATGTAAAAGAATTCAAGAGGGAAGGAAATATTAAGTTTCAGCAATGGCCTCACAATGATTAATATTGTGAATAATGTATTTATTGAGTATGTTATATACTTTCAAGTGAGAAATTGTTAATATTGCCTGGTGGAAATATAATGCTGCTATCCATCATTAAAAGATATGATGCTGATGAAAAATGAGCTTTCATTTATAAAAACTTGTCTCTCTTTGATATTCCTCAATAATGGAAAGGTACCCGTCGTCCAGCTTGATGGATCCCCTATGGGAACTGAGATAGGGAGGCCTTTTATTTCCTCCAGCTGGGCACATTTTTTCTTAGAAGCCACTATTCTTTAAATGGTACATCGTGCAAGCATGTCAGGATTGGGGAGTTTTTTCAAAAGATTGTTCTGTCATTTATATTTCTCGGTTTGATACGTTCTTTAAAACTCCTAAGGGGAGTTCTGTGTTTGATTGGTGCTCTAAATTTCAGAAGTTTGCATTTTTTTTTTTTAAAAAAAAAAAGAAAAAAAAAATAGGACAATGACCGGAACTGAGTAAACTGATGGTAAAAGTAGATTAGAGTATTTTTTTTTCCTTTTTAGCCTTTTTATTTATATGATTATTTCTTCAAATCATTTCCATAATTTCCTTCATTCTTTCTGAAGGATACAATATATATCTATTTTTGGTTCCTTATGTTCTGATAATCACGGCCACTCATTGTTTTATAACCCTCGCTTTGATGTCCTCACGAGTGAGAATGCCTGTAATAACAGTCAAGCTATGTCATTGTGAATAATTAATTTTTATTGATTTTCCTTAAATTTTACTATCATAATGGCAGGTCCTTGCTTTTAGGGACATATCACCACAAGCTCCTACACATATTCTAATCATTCCAAAAGTTAAGGATGGGTTATCTGGATTATCTAAGGTATTACTTTGGTATTTACTCTCTGCTTTTACCTTTTCAATCAATAACATCTAGCTAGGATTGGAGATATCTTAGGGGGAAGTCTGGTCTACAGCTGGGTACAACACCTTCCTTTGTTGTCTTAATGTCTAGGAGTTTTGTTTTATCTTTGTTCTTAGTCTTGACAGCTGAAGCCCTTTCATTTATTCTTGTTTGGTTTTTTCCTTTGCTCCTGTCTTGGGTTCCCTTGATTTGGGCTGATTTTTTGTATTCCCCAGTTGTATATTCTTTTATTTAGTTCTATTTTACGCCATTAAGATAAACATGTAATACCATGGCACATAATTGGCTATTCTTATGTGACCTTAGCATACTTTCTTTGTATTTTCGTCATTTACTTAATGTACTTCATAGGCCGAGGAGAGGCACATGGAGATTCTCGGCCACCTTCTTTACACCGCCAAGCTCATAGCCGAGCAAGAAGGGCTGGACGATGGCTTTAGAATTGTAATTAACGATGGACCAAGTGGATGTTAG

mRNA sequence

ATGGTGCAAATGGCAACAATAGCAAACATGAGAAGAAAGACGGATGGAGATCGGGAGTATACCAGTAATGACAATAGAGTAGAAAGTCGCGGGAAGCTGCGATACCACGATCGGAATAAAGACGGCGGCGAAACTGATCTGCGGGAGAAGGAGATGAAGACGGAGAGAGAAGAAGAAGAGAGAGAAGAAGAAGAGAGAGAAAGAGCTTCGTCCGGTCCTGACGAACCATCTTGCCAAAATCAGAATTCTTACTCTCTTGTCTTCCTTTCTCAAACCCTAAAACGGACAAATTCCAATTCCAGTTTGCTCCCCGGAGACCGGCTACCTGCCACCGTGTTCCACCACCACCGTCGCCGCCGCCGCCACACACTTCTACTCAAACCACTTGATCGTTGCCTCGACTTCGAAATTCATCGTCGGCTGCGTTTGCCCCCTAAAATTTGGAGATTTTGTTGTGTTTCTGTTGACTTTGGAGGTGATGGTTCTGAAGCTAATTCACCCGCCATCATCGTCCTTCTGAGTCCATTCCAGGAATTTTTTTCAAGTGCCGAACAAAGTGCAAGTGTTGCGGTTCTTGGTGGATCTACAGCCAAAAGTCCAATGCCACCTGGGGGAGGTGGAAAACAACGGTTGCGATGGACATCTGATCTTCACGACCGTTTTGTGGATGCCATCACACAACTTGGTGGACCAGATAGGGCAACTCCCAAAGGGGTTTTAAGAGTAATGGGGGTACCTGGTCTTACCATATATCATGTCAAAAGCCATTTACAGAAGTATCGTCTTGCAAAGTATTTGCCAGAATCTCCAGCAGATGGTTCTAAGGATGAAAAAAGAAGCTCAGAGAGTCTCTCTGGAACAGATTCATCTTCGGGCCTGCAAATCAATGAGGCATTGAGGATGCAAATGGAAGTTCAGAAACGTCTTCAAGAACAGCTCGAGGTTCAAAGGCAATTACAAATGAGAATAGAAGCACAGGCCAAATATTTGCAGAAGATCATTGAGGAGCAGCAGAAACTAGGCGGTGAATCAAAAGACACCGAGGCCTTGCCCTCGACTGAAGATAATAAGCAAAAAACATGCCAGTCTGAGTCATATAGCGATGTATCTGCAGAGCCTTCTTCTCCTCGAAAGAAACAACGACCAAGAATTGTACGAAAGCAACATTGGTCGGGTTTACGTCGGAGTTGGAAATCAAGTCTCACGAGAGAAAAAGGTCGACCAGTTGCATCAAATGTATGTTTGAAGTTAAGATCGAATGGTAGTGTCGTCGTCTTCAAGAAGTTGATGAGGTCTGTAACATTTGTATATAAATGTGCACATTTAAACCTATTTGTAAACCCTATTGAAATACTCAGACATGGGAATGACAGATCAGAAAAAATTAGGGCTGTGATGGTCAATGGCGATATAAAACCCTGGACTCGACTCTCAGTTCTAAGCTCCCACATTACACCTTCTCTTTCCATTTCCATGGCTTCTTCTGAGAAGGAAGCGGCTCTTGCAGCCGTCCCCTCCGATTCCCCCACCATATTTGACAAAATCATTAACAAAGAAATTCCATCTACGGTGGTCTTTGAGGATGACAAGGTCCTTGCTTTTAGGGACATATCACCACAAGCTCCTACACATATTCTAATCATTCCAAAAGTTAAGGATGGGTTATCTGGATTATCTAAGGCCGAGGAGAGGCACATGGAGATTCTCGGCCACCTTCTTTACACCGCCAAGCTCATAGCCGAGCAAGAAGGGCTGGACGATGGCTTTAGAATTGTAATTAACGATGGACCAAGTGGATGTTAG

Coding sequence (CDS)

ATGGTGCAAATGGCAACAATAGCAAACATGAGAAGAAAGACGGATGGAGATCGGGAGTATACCAGTAATGACAATAGAGTAGAAAGTCGCGGGAAGCTGCGATACCACGATCGGAATAAAGACGGCGGCGAAACTGATCTGCGGGAGAAGGAGATGAAGACGGAGAGAGAAGAAGAAGAGAGAGAAGAAGAAGAGAGAGAAAGAGCTTCGTCCGGTCCTGACGAACCATCTTGCCAAAATCAGAATTCTTACTCTCTTGTCTTCCTTTCTCAAACCCTAAAACGGACAAATTCCAATTCCAGTTTGCTCCCCGGAGACCGGCTACCTGCCACCGTGTTCCACCACCACCGTCGCCGCCGCCGCCACACACTTCTACTCAAACCACTTGATCGTTGCCTCGACTTCGAAATTCATCGTCGGCTGCGTTTGCCCCCTAAAATTTGGAGATTTTGTTGTGTTTCTGTTGACTTTGGAGGTGATGGTTCTGAAGCTAATTCACCCGCCATCATCGTCCTTCTGAGTCCATTCCAGGAATTTTTTTCAAGTGCCGAACAAAGTGCAAGTGTTGCGGTTCTTGGTGGATCTACAGCCAAAAGTCCAATGCCACCTGGGGGAGGTGGAAAACAACGGTTGCGATGGACATCTGATCTTCACGACCGTTTTGTGGATGCCATCACACAACTTGGTGGACCAGATAGGGCAACTCCCAAAGGGGTTTTAAGAGTAATGGGGGTACCTGGTCTTACCATATATCATGTCAAAAGCCATTTACAGAAGTATCGTCTTGCAAAGTATTTGCCAGAATCTCCAGCAGATGGTTCTAAGGATGAAAAAAGAAGCTCAGAGAGTCTCTCTGGAACAGATTCATCTTCGGGCCTGCAAATCAATGAGGCATTGAGGATGCAAATGGAAGTTCAGAAACGTCTTCAAGAACAGCTCGAGGTTCAAAGGCAATTACAAATGAGAATAGAAGCACAGGCCAAATATTTGCAGAAGATCATTGAGGAGCAGCAGAAACTAGGCGGTGAATCAAAAGACACCGAGGCCTTGCCCTCGACTGAAGATAATAAGCAAAAAACATGCCAGTCTGAGTCATATAGCGATGTATCTGCAGAGCCTTCTTCTCCTCGAAAGAAACAACGACCAAGAATTGTACGAAAGCAACATTGGTCGGGTTTACGTCGGAGTTGGAAATCAAGTCTCACGAGAGAAAAAGGTCGACCAGTTGCATCAAATGTATGTTTGAAGTTAAGATCGAATGGTAGTGTCGTCGTCTTCAAGAAGTTGATGAGGTCTGTAACATTTGTATATAAATGTGCACATTTAAACCTATTTGTAAACCCTATTGAAATACTCAGACATGGGAATGACAGATCAGAAAAAATTAGGGCTGTGATGGTCAATGGCGATATAAAACCCTGGACTCGACTCTCAGTTCTAAGCTCCCACATTACACCTTCTCTTTCCATTTCCATGGCTTCTTCTGAGAAGGAAGCGGCTCTTGCAGCCGTCCCCTCCGATTCCCCCACCATATTTGACAAAATCATTAACAAAGAAATTCCATCTACGGTGGTCTTTGAGGATGACAAGGTCCTTGCTTTTAGGGACATATCACCACAAGCTCCTACACATATTCTAATCATTCCAAAAGTTAAGGATGGGTTATCTGGATTATCTAAGGCCGAGGAGAGGCACATGGAGATTCTCGGCCACCTTCTTTACACCGCCAAGCTCATAGCCGAGCAAGAAGGGCTGGACGATGGCTTTAGAATTGTAATTAACGATGGACCAAGTGGATGTTAG

Protein sequence

MVQMATIANMRRKTDGDREYTSNDNRVESRGKLRYHDRNKDGGETDLREKEMKTEREEEEREEEERERASSGPDEPSCQNQNSYSLVFLSQTLKRTNSNSSLLPGDRLPATVFHHHRRRRRHTLLLKPLDRCLDFEIHRRLRLPPKIWRFCCVSVDFGGDGSEANSPAIIVLLSPFQEFFSSAEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQMEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQSESYSDVSAEPSSPRKKQRPRIVRKQHWSGLRRSWKSSLTREKGRPVASNVCLKLRSNGSVVVFKKLMRSVTFVYKCAHLNLFVNPIEILRHGNDRSEKIRAVMVNGDIKPWTRLSVLSSHITPSLSISMASSEKEAALAAVPSDSPTIFDKIINKEIPSTVVFEDDKVLAFRDISPQAPTHILIIPKVKDGLSGLSKAEERHMEILGHLLYTAKLIAEQEGLDDGFRIVINDGPSGC

Homology

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BLAST of CmoCh06G000560.1 vs. ExPASy Swiss-Prot
Match: Q9SJW0 (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-50
Identity = 118/175 (67.43%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 208 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLP 267
           KQRLRWT +LH+RFVDA+ QLGGPDRATPKGVLRVMGV GLTIYHVKSHLQKYRLAKYLP
Sbjct: 15  KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLP 74

Query: 268 ESPADGSK-DEKRSSESLSGTDSSSGLQINEALRMQMEVQKRLQEQLEVQRQLQMRIEAQ 327
           +S ++G K D+K S + LSG D SSG+QI EAL++QMEVQKRL EQLEVQRQLQ+RIEAQ
Sbjct: 75  DSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQ 134

Query: 328 AKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQSESYS---DVSAEPSSPRK 379
            KYL+KIIEEQQ+L G   +  A P T D+   T    S S   D S +   P K
Sbjct: 135 GKYLKKIIEEQQRLSGVLGEPSA-PVTGDSDPATPAPTSESPLQDKSGKDCGPDK 188

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BLAST of CmoCh06G000560.1 vs. ExPASy Swiss-Prot
Match: Q8GUN2 (Adenylylsulfatase HINT1 OS=Arabidopsis thaliana OX=3702 GN=HINT1 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.1e-49
Identity = 97/125 (77.60%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 476 RLSVLSSHITPSLSISMASSEKEAALAAVPSDSPTIFDKIINKEIPSTVVFEDDKVLAFR 535
           R+S+LSSH +P+ ++   +SEKEAALAA PSDSPTIFDKII+KEIPSTVVFEDDKVLAFR
Sbjct: 4   RVSILSSHFSPASAV--MASEKEAALAATPSDSPTIFDKIISKEIPSTVVFEDDKVLAFR 63

Query: 536 DISPQAPTHILIIPKVKDGLSGLSKAEERHMEILGHLLYTAKLIAEQEGLDDGFRIVIND 595
           DI+PQ P HIL+IPKV+DGL+GLSKAEERH++ILG LLYTAKL+A+QEGL +GFRIVIND
Sbjct: 64  DITPQGPVHILLIPKVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAEGFRIVIND 123

Query: 596 GPSGC 601
           GP GC
Sbjct: 124 GPQGC 126

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BLAST of CmoCh06G000560.1 vs. ExPASy Swiss-Prot
Match: P42856 (14 kDa zinc-binding protein OS=Zea mays OX=4577 GN=ZBP14 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.1e-43
Identity = 87/107 (81.31%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 494 SSEKEAALAAVPSDSPTIFDKIINKEIPSTVVFEDDKVLAFRDISPQAPTHILIIPKVKD 553
           SSEKEAAL  +  DSPTIFDKII KEIPSTVV+ED+KVLAFRDI+PQAPTHILIIPKVKD
Sbjct: 2   SSEKEAALRRL-DDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKD 61

Query: 554 GLSGLSKAEERHMEILGHLLYTAKLIAEQEGLDDGFRIVINDGPSGC 601
           GL+GL+KAEERH+EILG+LLY AK++A+QEGL+DG+R+VINDGPSGC
Sbjct: 62  GLTGLAKAEERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGC 107

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy Swiss-Prot
Match: A2X0Q0 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 GN=PHR3 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.0e-39
Identity = 103/207 (49.76%), Postives = 132/207 (63.77%), Query Frame = 0


Query: 177 QEFFSSAEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATP 236
           QE    A   A V +   S+++S        K RLRWT +LH+RFVDA+ +L GP++ATP
Sbjct: 237 QEDLQDARSPAKVQL---SSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATP 296

Query: 237 KGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTD--SSSGLQ 296
           KGVL++M V GLTIYH+KSHLQKYRLAKYLPE+  D  ++EK++    +G D       Q
Sbjct: 297 KGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKKKSAQ 356

Query: 297 INEALRMQMEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTE 356
           + EALRMQMEVQK+L EQLEVQRQLQ+RIE  A+YLQKI+EEQQK       +    +TE
Sbjct: 357 MAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQK--ARESISSMTSTTE 416

Query: 357 DNKQKTCQSESYSDVSAEPSSPRKKQR 382
               +    E   D +   S+P  K R
Sbjct: 417 GESPEFAPMEKTEDKAETSSAPLSKCR 438

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy Swiss-Prot
Match: Q6YXZ4 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR3 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.0e-39
Identity = 103/207 (49.76%), Postives = 132/207 (63.77%), Query Frame = 0


Query: 177 QEFFSSAEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATP 236
           QE    A   A V +   S+++S        K RLRWT +LH+RFVDA+ +L GP++ATP
Sbjct: 237 QEDLQDARSPAKVQL---SSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATP 296

Query: 237 KGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTD--SSSGLQ 296
           KGVL++M V GLTIYH+KSHLQKYRLAKYLPE+  D  ++EK++    +G D       Q
Sbjct: 297 KGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKKKSAQ 356

Query: 297 INEALRMQMEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTE 356
           + EALRMQMEVQK+L EQLEVQRQLQ+RIE  A+YLQKI+EEQQK       +    +TE
Sbjct: 357 MAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQK--ARESISSMTSTTE 416

Query: 357 DNKQKTCQSESYSDVSAEPSSPRKKQR 382
               +    E   D +   S+P  K R
Sbjct: 417 GESPEFAPMEKTEDKAETSSAPLSKCR 438

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1G5N3 (myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC111451116 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-99
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 183 AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 242
           AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV
Sbjct: 20  AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 79

Query: 243 MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 302
           MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ
Sbjct: 80  MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 139

Query: 303 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ 362
           MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ
Sbjct: 140 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ 199

Query: 363 SESYSDVSAEPSSPRKKQR 382
           SESYSDVSAEPSSPRKKQR
Sbjct: 200 SESYSDVSAEPSSPRKKQR 218

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1I5A6 (myb family transcription factor PHL7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470045 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.9e-98
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 183 AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 242
           AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV
Sbjct: 20  AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 79

Query: 243 MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 302
           MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ
Sbjct: 80  MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 139

Query: 303 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ 362
           MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKD+EALPS EDNKQKTCQ
Sbjct: 140 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDSEALPSAEDNKQKTCQ 199

Query: 363 SESYSDVSAEPSSPRKKQR 382
           SESYSDVSAEPSSPRKKQR
Sbjct: 200 SESYSDVSAEPSSPRKKQR 218

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy TrEMBL
Match: A0A1S3B7F5 (protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486829 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.0e-96
Identity = 193/199 (96.98%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 183 AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 242
           AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV
Sbjct: 20  AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 79

Query: 243 MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 302
           MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ
Sbjct: 80  MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 139

Query: 303 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ 362
           MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKD+E +PS EDNKQKTCQ
Sbjct: 140 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDSEVVPSAEDNKQKTCQ 199

Query: 363 SESYSDVSAEPSSPRKKQR 382
           SESY DVSA PSSPRKKQR
Sbjct: 200 SESYGDVSAGPSSPRKKQR 218

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1DJV4 (myb family transcription factor PHL7-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021560 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.8e-96
Identity = 193/199 (96.98%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 183 AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 242
           AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV
Sbjct: 20  AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 79

Query: 243 MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 302
           MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALR+Q
Sbjct: 80  MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRLQ 139

Query: 303 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ 362
           MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTE LP  EDNKQKTCQ
Sbjct: 140 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEVLPPAEDNKQKTCQ 199

Query: 363 SESYSDVSAEPSSPRKKQR 382
           SESY DVSA PSSPRKKQR
Sbjct: 200 SESYGDVSAGPSSPRKKQR 218

[Close]

BLAST of CmoCh06G000560.1 vs. ExPASy TrEMBL
Match: A0A0A0LF93 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814340 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-95
Identity = 192/199 (96.48%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 183 AEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 242
           AEQ ASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV
Sbjct: 20  AEQGASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRV 79

Query: 243 MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 302
           MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ
Sbjct: 80  MGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKRSSESLSGTDSSSGLQINEALRMQ 139

Query: 303 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQ 362
           MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKD+E +PS EDNKQKTCQ
Sbjct: 140 MEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKLGGESKDSEVVPSAEDNKQKTCQ 199

Query: 363 SESYSDVSAEPSSPRKKQR 382
           SESY DVSA PSSPRKKQR
Sbjct: 200 SESYGDVSAGPSSPRKKQR 218

[Close]

BLAST of CmoCh06G000560.1 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-51
Identity = 118/175 (67.43%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 208 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLP 267
           KQRLRWT +LH+RFVDA+ QLGGPDRATPKGVLRVMGV GLTIYHVKSHLQKYRLAKYLP
Sbjct: 15  KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLP 74

Query: 268 ESPADGSK-DEKRSSESLSGTDSSSGLQINEALRMQMEVQKRLQEQLEVQRQLQMRIEAQ 327
           +S ++G K D+K S + LSG D SSG+QI EAL++QMEVQKRL EQLEVQRQLQ+RIEAQ
Sbjct: 75  DSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQ 134

Query: 328 AKYLQKIIEEQQKLGGESKDTEALPSTEDNKQKTCQSESYS---DVSAEPSSPRK 379
            KYL+KIIEEQQ+L G   +  A P T D+   T    S S   D S +   P K
Sbjct: 135 GKYLKKIIEEQQRLSGVLGEPSA-PVTGDSDPATPAPTSESPLQDKSGKDCGPDK 188

[Close]

BLAST of CmoCh06G000560.1 vs. TAIR 10
Match: AT3G56490.1 (HIS triad family protein 3 )

HSP 1 Score: 198.0 bits (502), Expect = 2.2e-50
Identity = 97/125 (77.60%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 476 RLSVLSSHITPSLSISMASSEKEAALAAVPSDSPTIFDKIINKEIPSTVVFEDDKVLAFR 535
           R+S+LSSH +P+ ++   +SEKEAALAA PSDSPTIFDKII+KEIPSTVVFEDDKVLAFR
Sbjct: 4   RVSILSSHFSPASAV--MASEKEAALAATPSDSPTIFDKIISKEIPSTVVFEDDKVLAFR 63

Query: 536 DISPQAPTHILIIPKVKDGLSGLSKAEERHMEILGHLLYTAKLIAEQEGLDDGFRIVIND 595
           DI+PQ P HIL+IPKV+DGL+GLSKAEERH++ILG LLYTAKL+A+QEGL +GFRIVIND
Sbjct: 64  DITPQGPVHILLIPKVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAEGFRIVIND 123

Query: 596 GPSGC 601
           GP GC
Sbjct: 124 GPQGC 126

[Close]

BLAST of CmoCh06G000560.1 vs. TAIR 10
Match: AT5G29000.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-36
Identity = 91/189 (48.15%), Postives = 124/189 (65.61%), Query Frame = 0


Query: 167 PAIIVLLSPFQEFFSSAEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAIT 226
           P + +  +  Q+  SS +Q      L G  + S +      KQR+RWT +LH+ FV+A+ 
Sbjct: 156 PRLDITANQQQQMVSSEDQ------LSGRNSSSSV---ATSKQRMRWTPELHEAFVEAVN 215

Query: 227 QLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPE-SPADGSKDEKR--SSES 286
           QLGG +RATPK VL+++  PGLTIYHVKSHLQKYR A+Y PE S   G   EK+  S E 
Sbjct: 216 QLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIED 275

Query: 287 LSGTDSSSGLQINEALRMQMEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKL-GG 346
           +   D  + ++I +ALR+QMEVQKRL EQLE+QR LQ++IE Q +YLQ + E+QQK+   
Sbjct: 276 IKSLDMKTSVEITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDN 335

Query: 347 ESKDTEALP 352
           +S  +EA P
Sbjct: 336 KSSSSEASP 335

[Close]

BLAST of CmoCh06G000560.1 vs. TAIR 10
Match: AT5G29000.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-36
Identity = 91/189 (48.15%), Postives = 124/189 (65.61%), Query Frame = 0


Query: 167 PAIIVLLSPFQEFFSSAEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAIT 226
           P + +  +  Q+  SS +Q      L G  + S +      KQR+RWT +LH+ FV+A+ 
Sbjct: 199 PRLDITANQQQQMVSSEDQ------LSGRNSSSSV---ATSKQRMRWTPELHEAFVEAVN 258

Query: 227 QLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPE-SPADGSKDEKR--SSES 286
           QLGG +RATPK VL+++  PGLTIYHVKSHLQKYR A+Y PE S   G   EK+  S E 
Sbjct: 259 QLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIED 318

Query: 287 LSGTDSSSGLQINEALRMQMEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKL-GG 346
           +   D  + ++I +ALR+QMEVQKRL EQLE+QR LQ++IE Q +YLQ + E+QQK+   
Sbjct: 319 IKSLDMKTSVEITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDN 378

Query: 347 ESKDTEALP 352
           +S  +EA P
Sbjct: 379 KSSSSEASP 378

[Close]

BLAST of CmoCh06G000560.1 vs. TAIR 10
Match: AT5G29000.3 (Homeodomain-like superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-36
Identity = 91/189 (48.15%), Postives = 124/189 (65.61%), Query Frame = 0


Query: 167 PAIIVLLSPFQEFFSSAEQSASVAVLGGSTAKSPMPPGGGGKQRLRWTSDLHDRFVDAIT 226
           P + +  +  Q+  SS +Q      L G  + S +      KQR+RWT +LH+ FV+A+ 
Sbjct: 156 PRLDITANQQQQMVSSEDQ------LSGRNSSSSV---ATSKQRMRWTPELHEAFVEAVN 215

Query: 227 QLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPE-SPADGSKDEKR--SSES 286
           QLGG +RATPK VL+++  PGLTIYHVKSHLQKYR A+Y PE S   G   EK+  S E 
Sbjct: 216 QLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIED 275

Query: 287 LSGTDSSSGLQINEALRMQMEVQKRLQEQLEVQRQLQMRIEAQAKYLQKIIEEQQKL-GG 346
           +   D  + ++I +ALR+QMEVQKRL EQLE+QR LQ++IE Q +YLQ + E+QQK+   
Sbjct: 276 IKSLDMKTSVEITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDN 335

Query: 347 ESKDTEALP 352
           +S  +EA P
Sbjct: 336 KSSSSEASP 335

The following BLAST results are available for this feature:

BLAST of CmoCh06G000560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW0	1.6e-50	67.43	Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=...	[more]
Q8GUN2	3.1e-49	77.60	Adenylylsulfatase HINT1 OS=Arabidopsis thaliana OX=3702 GN=HINT1 PE=1 SV=1	[more]
P42856	1.1e-43	81.31	14 kDa zinc-binding protein OS=Zea mays OX=4577 GN=ZBP14 PE=1 SV=1	[more]
A2X0Q0	1.0e-39	49.76	Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q6YXZ4	1.0e-39	49.76	Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CmoCh06G000560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5N3	4.4e-99	100.00	myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I5A6	4.9e-98	98.99	myb family transcription factor PHL7-like isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A1S3B7F5	6.0e-96	96.98	protein PHR1-LIKE 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486829 PE=3...	[more]
A0A6J1DJV4	7.8e-96	96.98	myb family transcription factor PHL7-like isoform X1 OS=Momordica charantia OX=3...	[more]
A0A0A0LF93	1.7e-95	96.48	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G81434...	[more]

BLAST of CmoCh06G000560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01060.1	1.2e-51	67.43	myb-like HTH transcriptional regulator family protein	[more]
AT3G56490.1	2.2e-50	77.60	HIS triad family protein 3	[more]
AT5G29000.1	1.4e-36	48.15	Homeodomain-like superfamily protein	[more]
AT5G29000.2	1.4e-36	48.15	Homeodomain-like superfamily protein	[more]
AT5G29000.3	1.4e-36	48.15	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 296..316
None	No IPR available	COILS	Coil	Coil	coord: 47..69
None	No IPR available	GENE3D	1.10.10.60		coord: 207..266 e-value: 7.8E-29 score: 101.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..72
None	No IPR available	PANTHER	PTHR31314:SF1	OS05G0491500 PROTEIN	coord: 182..382
None	No IPR available	CDD	cd01276	PKCI_related	coord: 509..600 e-value: 5.548E-41 score: 141.931
IPR001310	Histidine triad (HIT) protein	PRINTS	PR00332	HISTRIAD	coord: 532..550 score: 67.37 coord: 511..527 score: 55.53
IPR001310	Histidine triad (HIT) protein	PFAM	PF01230	HIT	coord: 518..599 e-value: 3.8E-18 score: 66.0
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 293..339 e-value: 1.5E-21 score: 75.8
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 211..261 e-value: 7.9E-6 score: 26.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 208..265 score: 11.315401
IPR036265	HIT-like superfamily	GENE3D	3.30.428.10		coord: 490..600 e-value: 1.3E-27 score: 98.5
IPR036265	HIT-like superfamily	SUPERFAMILY	54197	HIT-like	coord: 507..598
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 208..263 e-value: 1.4E-25 score: 87.4
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 182..382
IPR011146	HIT-like domain	PROSITE	PS51084	HIT_2	coord: 511..600 score: 10.463013
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 208..262

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh06G000560	CmoCh06G000560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000560.1:exon:8516	CmoCh06G000560.1:exon:8516	exon
CmoCh06G000560.1:exon:8515	CmoCh06G000560.1:exon:8515	exon
CmoCh06G000560.1:exon:8514	CmoCh06G000560.1:exon:8514	exon
CmoCh06G000560.1:exon:8513	CmoCh06G000560.1:exon:8513	exon
CmoCh06G000560.1:exon:8512	CmoCh06G000560.1:exon:8512	exon
CmoCh06G000560.1:exon:8511	CmoCh06G000560.1:exon:8511	exon
CmoCh06G000560.1:exon:8510	CmoCh06G000560.1:exon:8510	exon
CmoCh06G000560.1:exon:8509	CmoCh06G000560.1:exon:8509	exon
CmoCh06G000560.1:exon:8508	CmoCh06G000560.1:exon:8508	exon
CmoCh06G000560.1:exon:8507	CmoCh06G000560.1:exon:8507	exon
CmoCh06G000560.1:exon:8506	CmoCh06G000560.1:exon:8506	exon
CmoCh06G000560.1:exon:8505	CmoCh06G000560.1:exon:8505	exon
CmoCh06G000560.1:exon:8504	CmoCh06G000560.1:exon:8504	exon
CmoCh06G000560.1:exon:8503	CmoCh06G000560.1:exon:8503	exon
CmoCh06G000560.1:exon:8502	CmoCh06G000560.1:exon:8502	exon
CmoCh06G000560.1:exon:8501	CmoCh06G000560.1:exon:8501	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_16	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_15	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_14	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_13	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_12	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_11	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_10	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_9	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_8	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_7	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_6	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_5	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_4	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_3	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds_2	CDS
CmoCh06G000560.1:cds	CmoCh06G000560.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh06G000560.1	CmoCh06G000560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity