CmoCh05G004420.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G004420.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF3511)
Location	Cmo_Chr05: 2060011 .. 2062571 (+)
Sequence length	906
RNA-Seq Expression	CmoCh05G004420.1
Synteny	CmoCh05G004420.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGACAGAAGAGGTTCTTACGGAAGCTCGTCGATGCAGATCGAGAGCTATTACGGGCCACCGAAGAGCCAGATTCCTGGGAAAAAAGACAAGAGAAGTTCTGGATCTTCTTCAAAATCATTCAAATTTTCAGATCCTGAGTTTCAAAGGAAGAAAAGGGTTGCCAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAAGGCTCCTTCAGAAAGAGCTTCAGATGGCTCAAGGATAAGTACACCCAAATGCTTTATGGCTGGTGGTGAGTTTCTTATGGAAGATCCAACAAAATTCTGTATCTGGGATGATTTCCTTCGATTAAGTAGTCTTCTTTTTGTGATTTTTTCTGGGAAATTTCTGTTCATGTTCTTCATTGTTCATCATTGTTCATCATCGTTCATCATCGTTCATCATCTGATCTGCTTGTTTTGGTTGGATACTCTTTTGGGAGTTATGAATGTTGAAATGTAAACAAGTCATCAGTCAAACTTTGCAAATAAAAGCTATCTTTTTTCTCTTTTCATTTCGTTTCATTCTTTGAATCAGTCAATAGTGTTTGATATCATATGAAGATGATGGCATTATTTTGTTCTATGCCCACTGTTCTTCTCAGCCACTCATTTTGTTAAATGAATTATGAACAAAATTATGGCAAAAAGTCATGATTGATCAAGAAAAGGAAACATAGTTTTCAAAAATCTATTGGAATTGTAAATGAACTTGAGCTCGGTTTGATAACTAATTCACGGGTTTTGCTTTGTTGGGGTCTTTCTTATTTAGGTTGTAAGGGGATGCTCGGCTTAGAATATCAACCCTTCTCTTGTTCACCAACTCTCGCCTCATTCTGTGCTTCTAGACATGTCGAGCTCCACATATTCTTGTACAGGGACAAAAGACTAATTGCGATGTGCACGAATTATTACCGGGATTACTTTAGAATTCAAGAGAGCCATTGAGCTTCAGACCACAACCATGTAGTTAGATAGGGACAATCAATCGACCAAAGAAGACAAAAATCTGTGCTGATCTTCCGCCCGAAATAATTACCTCACTTCACTTACGAAGTAGTTTGTACCACCATCCACTACTCTTGATGATGCCTCAGATAACTATGCAATTGTTTGAAAATATTGATTTTTATTTTAAATGTGTTTTTAGTTCGAGGTTGGATCGAGCCCAGTTGAGACATTTTTAAACCAACTTAATTGTTCAGAGTTTTGTAAATTTTTATTTCGAAATGTTTAAATTTTATTATTATTTTTTTAGAAATAAAAGTAAACTATTTTGTAAAACATTTATTTATTTTCGATCATTGATTTAAATTTAAACATTCATGTCCTGAACTTTTTAAAAAAAAATAATGGGTCACTGTCCATACTGTGTTATAACTGTAAATTAAATTTATTTAACTCTCTACATCAAATTAACTAGTAAGATCGAAAAATTTGAATATCTGACCTCTTAGTCAACTACTCATTCTAGAAATTTATTCATTTCAGACTACAAATTTACTTATAAGAACCTCGGACTTTAAAAAAGAAATACATATAATTTTGTTGGATGAAATTGGTTGGGTAGAAAAGAGGCAAAAACTCTGTTTCTCTCCCATTTTCCCCTGTATTTTCGCCTTCTCTTTCGCCTTCTTTTATTGTGAAAACAGACCAAAAAAACAGAGCCAAAAACGCCAAAAAAAACTCATCCAATCCCTTCTTCTTCATCATCCTCCTTTCAATTCCTCATTTCCTTGCAGAAACTAATCAATTTCTGCCATTGTTATTCGATTTCCCAGCTCCAACCAGACAAAAAACAAGACAAGATTAAAAAACAGAGCATCCCAAAATGAACAGATGAAAGCAGAGCTCCTCATTGGGTTTCATTTTCCTCTGTTTTTTTTAATGTTTTAGTCATGGTGAGAAGCTTTCCGACGGATGAGAACCCGTTAATTCATCCGGCGATTTCCCTCTCCCTTCTAGCGGCTGGGATGGCAGCCGCCATCGCTATGATCACCACCTTATGCGGTGACCGATCCCGGAAAACACCCACAGCCTCTGAAGCTTCATCTCCAACCGCCGCCGATAACAAACCAGACGAAAACGCTTCCCCGACGGTGAACCCATCCGGCGGAGAAACAGGAAACGACGGCGACGAACAGGGTGTGAAAGAACTTCCCCTGCCTCCGAAAATGCAACAGCTCGGGAGTGCGAGCCCGCCGACGCAAATTTCTAAATCGGCGTCGGAAAGGAAATTGACCCATATGAAAAGTATGAACGTTAATGTTCCGAGAAGCCTGTCGGTGGCGCGGCACAATTTAGACGATGGTCGGCATAAGAAAAAGGATAAGATTAAAGGGGAAGATTCGATTTGGACGAAGACCATAATTTTAGGGGAGAAATGCAAAGTTACAGATGAAGAAGATGGGATTATTTATGAAGGAAAAGGGAAGAAGATATCGGCGTATCATCCGAGAGCTCCGAGTTCGATGTCGACGTCGCTTTCTAGGCAGGGATCCGCCATTGATGCGGAAGCTCTGCCCAGCACAGAAGATAAGTAG

mRNA sequence

ATGGATGATGACAGAAGAGGTTCTTACGGAAGCTCGTCGATGCAGATCGAGAGCTATTACGGGCCACCGAAGAGCCAGATTCCTGGGAAAAAAGACAAGAGAAGTTCTGGATCTTCTTCAAAATCATTCAAATTTTCAGATCCTGAGTTTCAAAGGAAGAAAAGGGTTGCCAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAAGGCTCCTTCAGAAAGAGCTTCAGATGGCTCAAGGATAAGTACACCCAAATGCTTTATGGCTGGTGCTTTCCGACGGATGAGAACCCGTTAATTCATCCGGCGATTTCCCTCTCCCTTCTAGCGGCTGGGATGGCAGCCGCCATCGCTATGATCACCACCTTATGCGGTGACCGATCCCGGAAAACACCCACAGCCTCTGAAGCTTCATCTCCAACCGCCGCCGATAACAAACCAGACGAAAACGCTTCCCCGACGGTGAACCCATCCGGCGGAGAAACAGGAAACGACGGCGACGAACAGGGTGTGAAAGAACTTCCCCTGCCTCCGAAAATGCAACAGCTCGGGAGTGCGAGCCCGCCGACGCAAATTTCTAAATCGGCGTCGGAAAGGAAATTGACCCATATGAAAAGTATGAACGTTAATGTTCCGAGAAGCCTGTCGGTGGCGCGGCACAATTTAGACGATGGTCGGCATAAGAAAAAGGATAAGATTAAAGGGGAAGATTCGATTTGGACGAAGACCATAATTTTAGGGGAGAAATGCAAAGTTACAGATGAAGAAGATGGGATTATTTATGAAGGAAAAGGGAAGAAGATATCGGCGTATCATCCGAGAGCTCCGAGTTCGATGTCGACGTCGCTTTCTAGGCAGGGATCCGCCATTGATGCGGAAGCTCTGCCCAGCACAGAAGATAAGTAG

Coding sequence (CDS)

ATGGATGATGACAGAAGAGGTTCTTACGGAAGCTCGTCGATGCAGATCGAGAGCTATTACGGGCCACCGAAGAGCCAGATTCCTGGGAAAAAAGACAAGAGAAGTTCTGGATCTTCTTCAAAATCATTCAAATTTTCAGATCCTGAGTTTCAAAGGAAGAAAAGGGTTGCCAGTTACAAGATGTACTCTGTTGAAGGCAAGATGAAAGGCTCCTTCAGAAAGAGCTTCAGATGGCTCAAGGATAAGTACACCCAAATGCTTTATGGCTGGTGCTTTCCGACGGATGAGAACCCGTTAATTCATCCGGCGATTTCCCTCTCCCTTCTAGCGGCTGGGATGGCAGCCGCCATCGCTATGATCACCACCTTATGCGGTGACCGATCCCGGAAAACACCCACAGCCTCTGAAGCTTCATCTCCAACCGCCGCCGATAACAAACCAGACGAAAACGCTTCCCCGACGGTGAACCCATCCGGCGGAGAAACAGGAAACGACGGCGACGAACAGGGTGTGAAAGAACTTCCCCTGCCTCCGAAAATGCAACAGCTCGGGAGTGCGAGCCCGCCGACGCAAATTTCTAAATCGGCGTCGGAAAGGAAATTGACCCATATGAAAAGTATGAACGTTAATGTTCCGAGAAGCCTGTCGGTGGCGCGGCACAATTTAGACGATGGTCGGCATAAGAAAAAGGATAAGATTAAAGGGGAAGATTCGATTTGGACGAAGACCATAATTTTAGGGGAGAAATGCAAAGTTACAGATGAAGAAGATGGGATTATTTATGAAGGAAAAGGGAAGAAGATATCGGCGTATCATCCGAGAGCTCCGAGTTCGATGTCGACGTCGCTTTCTAGGCAGGGATCCGCCATTGATGCGGAAGCTCTGCCCAGCACAGAAGATAAGTAG

Protein sequence

MDDDRRGSYGSSSMQIESYYGPPKSQIPGKKDKRSSGSSSKSFKFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWCFPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENASPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSTSLSRQGSAIDAEALPSTEDK

Homology

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BLAST of CmoCh05G004420.1 vs. ExPASy TrEMBL
Match: A0A5A7VC31 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00340 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 161/220 (73.18%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 92  FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAAD-NKPDEN 151
           FPTD+NPLIHPAISL LLAAGMAAAIAMITTLCG RSR+  T SEASSPTA + NK +EN
Sbjct: 5   FPTDDNPLIHPAISLFLLAAGMAAAIAMITTLCGVRSRRRSTPSEASSPTATENNKAEEN 64

Query: 152 ASPT---------VNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKL 211
            SPT          NPS  ET N+G+   VKELPLPPKMQQ+ S+SPP QI KSASERKL
Sbjct: 65  VSPTTTTPSLATAANPSDRETENEGE---VKELPLPPKMQQVTSSSPPNQILKSASERKL 124

Query: 212 THMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIY 271
            HM+SM++ VPRSLSV R++LD+GR ++K+KIKGEDSIWTKTIILGEKCKV+DEEDGIIY
Sbjct: 125 NHMRSMSIKVPRSLSVVRNHLDEGRQRRKEKIKGEDSIWTKTIILGEKCKVSDEEDGIIY 184

Query: 272 EGKGKKISAYHPRAPSSMSTSLSRQGSAIDAEALPSTEDK 302
           EGKGKKI+AYHPRAPSSMS S+SRQ SA +AEALP++E K
Sbjct: 185 EGKGKKITAYHPRAPSSMSISMSRQNSANEAEALPNSEAK 221

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BLAST of CmoCh05G004420.1 vs. ExPASy TrEMBL
Match: A0A6J1KUB9 (uncharacterized protein LOC111496482 OS=Cucurbita maxima OX=3661 GN=LOC111496482 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 6.1e-65
Identity = 142/214 (66.36%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 92  FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENA 151
           FPTDEN LIHPAISL+L+AAGM  AIAMIT LCG RSR++P+ SEASS T AD K D N 
Sbjct: 21  FPTDENLLIHPAISLTLMAAGMVTAIAMITALCGVRSRRSPSPSEASSKT-ADKKQDING 80

Query: 152 SPT-------VNPSGGETGNDG--DEQGVKELPLPPKMQQLGSASPPTQISKSASERKLT 211
           S T         P+ G++G+DG   E+ +KELPLPPKMQQ+ S SPP+QI+KSASER+L 
Sbjct: 81  SRTTTSSTAGATPAAGDSGDDGGETEEFMKELPLPPKMQQVASPSPPSQIAKSASERRLK 140

Query: 212 HMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYE 271
           HM  MN+ VPRS SVAR +L++G  ++K+K+K E+ IW KTIILGEKC+V+DEEDG+IYE
Sbjct: 141 HMTGMNMEVPRSHSVARKDLEEGGERRKEKMKEEELIWKKTIILGEKCRVSDEEDGVIYE 200

Query: 272 GKGKKISAYHPRAPSSMSTSLSRQGSAIDAEALP 297
           GKGK+ISAYHPR+PSSMS S+SRQ SAIDAEALP
Sbjct: 201 GKGKRISAYHPRSPSSMSISISRQSSAIDAEALP 233

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BLAST of CmoCh05G004420.1 vs. ExPASy TrEMBL
Match: A0A0A0KD46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364120 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.6e-63
Identity = 136/190 (71.58%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 119 MITTLCGDRSRKTPTASEASSPTAADNKPDENASPT-------VNPSGGETGNDGDEQGV 178
           MITTLCG RSR+  T SE SS  AADNK DEN SPT        NPSGGE  N+G+   +
Sbjct: 1   MITTLCGVRSRRRSTPSEDSSHAAADNKTDENVSPTTTTPFQAANPSGGEAENEGE---M 60

Query: 179 KELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKD 238
           KELPLPPKMQQ+ S SPP+QISKSASERKL HM+SM++ VPRSLSV R++LD+GR ++K+
Sbjct: 61  KELPLPPKMQQVASTSPPSQISKSASERKLNHMRSMSIKVPRSLSVVRNHLDEGRQRRKE 120

Query: 239 KIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSTSLSRQGSAID 298
           +IKGEDSIWTKTIILGEKCKV+DEEDGIIYEGKGKKI+AYHPRAPSSMS S+SRQ SA++
Sbjct: 121 RIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGKGKKITAYHPRAPSSMSISMSRQNSAVE 180

Query: 299 AEALPSTEDK 302
           AEAL S+E K
Sbjct: 181 AEALQSSEAK 187

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BLAST of CmoCh05G004420.1 vs. ExPASy TrEMBL
Match: A0A6A1WQ24 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G029376 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.6e-33
Identity = 100/224 (44.64%), Postives = 132/224 (58.93%), Query Frame = 0


Query: 93  PTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDR-------------SRKTPTASEASS 152
           PT+E PL HP +S SLLA G+AAAIA IT LCG R               KT    +AS+
Sbjct: 77  PTNEEPLTHPVLSFSLLAVGLAAAIATITALCGGRLWKRLSPPSPSSVHHKTAEKLDASN 136

Query: 153 PTAADNKPDENASPTVNPSGGETGNDG----DEQGVKELPLPPKMQQLGSASPPTQISKS 212
            TA          P+   +   T ++G     E   +ELPLPP M  +  +    +I+KS
Sbjct: 137 LTATTMTITSQTPPSPRKAAKPTESEGTTHDKESQARELPLPPAMMPMRESQSRVRITKS 196

Query: 213 ASERKLTHMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDE 272
           +S+R L   K++ + +PRSLS+AR   +D   +KK  +  EDSIW KTIILGEKCKV DE
Sbjct: 197 SSDRNLA--KNLTMKLPRSLSMARK--EDNNQRKKG-LNSEDSIWMKTIILGEKCKVPDE 256

Query: 273 EDGIIYEGKGKKISAYHPRAPSSMSTSLSRQGSAIDAEALPSTE 300
           +D +IY+GKGK+IS YHP+ PS +  SLSR+GS  + EA P  E
Sbjct: 257 DDAVIYDGKGKRISTYHPKTPSMI--SLSRRGSFSEPEARPGPE 293

[Close]

BLAST of CmoCh05G004420.1 vs. ExPASy TrEMBL
Match: A0A498HTS8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012659 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.5e-31
Identity = 98/227 (43.17%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 89  GWCFPTDE-NPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKP 148
           G   PTDE N LIHP +SLS  AA MAA IA+IT+LC  R + + ++SE+ +   A+ + 
Sbjct: 2   GRTIPTDETNLLIHPLLSLSFFAAAMAATIAIITSLCSFRRKSSSSSSESPASKEAE-ES 61

Query: 149 DENASPTVNPSGGETGNDGDEQGV------------KELPLPPKMQQ-----LGSASPPT 208
           D   + T   + GETGN   +Q              KELPLPP+M+       G+     
Sbjct: 62  DVGKAQTSEAALGETGNKTSQQDTEANRGNDDSRMSKELPLPPRMKNSGQLYSGNLDTKI 121

Query: 209 QISKSASERKLTHMKSMNVNVPRSLSVARHN--LDDGRHKKKDKIKGEDSIWTKTIILGE 268
           Q+ KSASER+L  + ++++ +PRSLS+AR +   ++   +K  K+K EDS+W KTIILGE
Sbjct: 122 QMKKSASERRL--LSNLSLKLPRSLSMARKDKVKEEYNKRKNGKLKSEDSVWMKTIILGE 181

Query: 269 KCKVTDEEDGIIYEGKGKKISAYHPRAPSSMSTSLSRQGSAIDAEAL 296
           KCKV DE++ +IY+ KG++I AYHPR         SRQ S ID  AL
Sbjct: 182 KCKVPDEDEAVIYDAKGRRIPAYHPR---------SRQSSFIDPNAL 216

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BLAST of CmoCh05G004420.1 vs. NCBI nr
Match: KAG6598610.1 (hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029546.1 hypothetical protein SDJN02_07885, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 4.6e-107
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 92  FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENA 151
           FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENA
Sbjct: 5   FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENA 64

Query: 152 SPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNV 211
           SPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNV
Sbjct: 65  SPTVNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNV 124

Query: 212 PRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAY 271
           PRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAY
Sbjct: 125 PRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAY 184

Query: 272 HPRAPSSMSTSLSRQGSAIDAEALPSTEDK 302
           HPRAPSSMS SLSRQGSAIDAEALPS EDK
Sbjct: 185 HPRAPSSMSASLSRQGSAIDAEALPSPEDK 214

[Close]

BLAST of CmoCh05G004420.1 vs. NCBI nr
Match: KGN47811.2 (hypothetical protein Csa_018925 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 5.4e-76
Identity = 159/217 (73.27%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 92  FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENA 151
           FPTD+NPLIHPAI L LLAAGMAAAI+MITTLCG RSR+  T SE SS  AADNK DEN 
Sbjct: 5   FPTDDNPLIHPAIPLFLLAAGMAAAISMITTLCGVRSRRRSTPSEDSSHAAADNKTDENV 64

Query: 152 SPT-------VNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHM 211
           SPT        NPSGGE  N+G+   +KELPLPPKMQQ+ S SPP+QISKSASERKL HM
Sbjct: 65  SPTTTTPFQAANPSGGEAENEGE---MKELPLPPKMQQVASTSPPSQISKSASERKLNHM 124

Query: 212 KSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGK 271
           +SM++ VPRSLSV R++LD+GR ++K++IKGEDSIWTKTIILGEKCKV+DEEDGIIYEGK
Sbjct: 125 RSMSIKVPRSLSVVRNHLDEGRQRRKERIKGEDSIWTKTIILGEKCKVSDEEDGIIYEGK 184

Query: 272 GKKISAYHPRAPSSMSTSLSRQGSAIDAEALPSTEDK 302
           GKKI+AYHPRAPSSMS S+SRQ SA++AEAL S+E K
Sbjct: 185 GKKITAYHPRAPSSMSISMSRQNSAVEAEALQSSEAK 218

[Close]

BLAST of CmoCh05G004420.1 vs. NCBI nr
Match: KAA0064730.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 1.0e-74
Identity = 161/220 (73.18%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 92  FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAAD-NKPDEN 151
           FPTD+NPLIHPAISL LLAAGMAAAIAMITTLCG RSR+  T SEASSPTA + NK +EN
Sbjct: 5   FPTDDNPLIHPAISLFLLAAGMAAAIAMITTLCGVRSRRRSTPSEASSPTATENNKAEEN 64

Query: 152 ASPT---------VNPSGGETGNDGDEQGVKELPLPPKMQQLGSASPPTQISKSASERKL 211
            SPT          NPS  ET N+G+   VKELPLPPKMQQ+ S+SPP QI KSASERKL
Sbjct: 65  VSPTTTTPSLATAANPSDRETENEGE---VKELPLPPKMQQVTSSSPPNQILKSASERKL 124

Query: 212 THMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIY 271
            HM+SM++ VPRSLSV R++LD+GR ++K+KIKGEDSIWTKTIILGEKCKV+DEEDGIIY
Sbjct: 125 NHMRSMSIKVPRSLSVVRNHLDEGRQRRKEKIKGEDSIWTKTIILGEKCKVSDEEDGIIY 184

Query: 272 EGKGKKISAYHPRAPSSMSTSLSRQGSAIDAEALPSTEDK 302
           EGKGKKI+AYHPRAPSSMS S+SRQ SA +AEALP++E K
Sbjct: 185 EGKGKKITAYHPRAPSSMSISMSRQNSANEAEALPNSEAK 221

[Close]

BLAST of CmoCh05G004420.1 vs. NCBI nr
Match: XP_023002698.1 (uncharacterized protein LOC111496482 [Cucurbita maxima])

HSP 1 Score: 257.7 bits (657), Expect = 1.3e-64
Identity = 142/214 (66.36%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 92  FPTDENPLIHPAISLSLLAAGMAAAIAMITTLCGDRSRKTPTASEASSPTAADNKPDENA 151
           FPTDEN LIHPAISL+L+AAGM  AIAMIT LCG RSR++P+ SEASS T AD K D N 
Sbjct: 21  FPTDENLLIHPAISLTLMAAGMVTAIAMITALCGVRSRRSPSPSEASSKT-ADKKQDING 80

Query: 152 SPT-------VNPSGGETGNDG--DEQGVKELPLPPKMQQLGSASPPTQISKSASERKLT 211
           S T         P+ G++G+DG   E+ +KELPLPPKMQQ+ S SPP+QI+KSASER+L 
Sbjct: 81  SRTTTSSTAGATPAAGDSGDDGGETEEFMKELPLPPKMQQVASPSPPSQIAKSASERRLK 140

Query: 212 HMKSMNVNVPRSLSVARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYE 271
           HM  MN+ VPRS SVAR +L++G  ++K+K+K E+ IW KTIILGEKC+V+DEEDG+IYE
Sbjct: 141 HMTGMNMEVPRSHSVARKDLEEGGERRKEKMKEEELIWKKTIILGEKCRVSDEEDGVIYE 200

Query: 272 GKGKKISAYHPRAPSSMSTSLSRQGSAIDAEALP 297
           GKGK+ISAYHPR+PSSMS S+SRQ SAIDAEALP
Sbjct: 201 GKGKRISAYHPRSPSSMSISISRQSSAIDAEALP 233

[Close]

BLAST of CmoCh05G004420.1 vs. NCBI nr
Match: KAG6585751.1 (hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.4 bits (555), Expect = 8.5e-53
Identity = 127/199 (63.82%), Postives = 154/199 (77.39%), Query Frame = 0


Query: 109 LAAGMAAAIAMITTLCG--DRSRKTPTASEASSPTAADNKPDENASPT-------VNPSG 168
           +AAGM AAIAMIT LCG   RSR++   SEASS T AD K D N S T         P  
Sbjct: 1   MAAGMVAAIAMITALCGVRSRSRRSSPPSEASSKT-ADKKQDINGSRTTTSSTAGTTPVA 60

Query: 169 GETGNDG--DEQGVKELPLPPKMQQLGSASPPTQISKSASERKLTHMKSMNVNVPRSLSV 228
           GE+GNDG   E+ +KELPLPPKMQQ+ S SPP++I+KSASER+L HM S+N+ VPRS SV
Sbjct: 61  GESGNDGVETEELMKELPLPPKMQQVASPSPPSKIAKSASERRLKHMTSLNMKVPRSHSV 120

Query: 229 ARHNLDDGRHKKKDKIKGEDSIWTKTIILGEKCKVTDEEDGIIYEGKGKKISAYHPRAPS 288
           AR +L++G  ++K+K+  E+ IW KTIILGEKC+V+DEEDG+IYEGKGK+ISAYHPR+PS
Sbjct: 121 ARKDLEEGGGRRKEKMIEEELIWQKTIILGEKCRVSDEEDGVIYEGKGKRISAYHPRSPS 180

Query: 289 SMSTSLSRQGSAIDAEALP 297
           SMS S+SRQ SAIDAEALP
Sbjct: 181 SMSISISRQSSAIDAEALP 198

[Close]

BLAST of CmoCh05G004420.1 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-18
Identity = 53/103 (51.46%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 2   DDDRRGSYGSSSMQIESY--------------YGPPKSQIPGKKDKRSSGSSSKSFKFSD 61
           D  R+  YG   MQI+ Y              YG  ++ I   K K  S + SKS+  +D
Sbjct: 3   DFGRQRPYGDGGMQIQPYHGNQGGDFRSYSASYGTRENNIYDVK-KEKSIARSKSWGITD 62

Query: 62  PEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGW 91
           PE QRKKRVASYKMY VEGK+KGSFR SFRWLK +YTQ++YGW
Sbjct: 63  PELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

[Close]

BLAST of CmoCh05G004420.1 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 4   DRRGSYGSSSMQ-IESY---YGPPKSQIP-GKKDKRSSGSSSKSFKFSDPEFQRKKRVAS 63
           D   S+  + MQ + SY   Y    ++IP  +  K+   SSS S+ F DP+ QRKKRV S
Sbjct: 27  DGPDSFSGNGMQDLRSYSTSYTDYPTRIPEDQNPKKGRSSSSSSWGFVDPDLQRKKRVVS 86

Query: 64  YKMYSVEGKMKGSFRKSFRWLKDKYTQML 88
           Y+ Y+VEGK+KGSFRKSF+W+KDK  ++L
Sbjct: 87  YRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

[Close]

BLAST of CmoCh05G004420.1 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-10
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 26 QIPGKKDK---RSSGSSSKSFKFSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKD 82
          Q+  KK K    +  ++S+S+ FSDPE +RK+RVA YK+YSVE KMKGS RKSF+W KD
Sbjct: 39 QLKIKKSKSVPNADRAASRSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFKD 97

[Close]

BLAST of CmoCh05G004420.1 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-09
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 31  KDKRSSGSSSKSFK-FSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG 90
           K KRS+    K FK   + E QRKKRVASY +Y VEG++KGS +KSF+W K+  +  +YG
Sbjct: 66  KSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETCSNAVYG 125

[Close]

BLAST of CmoCh05G004420.1 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 29/58 (50.00%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 34  RSSGSSSKSFK--FSDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG 90
           R S S S  FK  ++DPE +RK+RVA YK+YS EGKMK + RKS++W+K + +++++G
Sbjct: 66  RRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

The following BLAST results are available for this feature:

BLAST of CmoCh05G004420.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G004420.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC31	5.0e-75	73.18	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1KUB9	6.1e-65	66.36	uncharacterized protein LOC111496482 OS=Cucurbita maxima OX=3661 GN=LOC111496482...	[more]
A0A0A0KD46	2.6e-63	71.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364120 PE=4 SV=1	[more]
A0A6A1WQ24	3.6e-33	44.64	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G029376 PE=4 SV=1	[more]
A0A498HTS8	7.5e-31	43.17	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012659 PE=4 SV=1	[more]

BLAST of CmoCh05G004420.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598610.1	4.6e-107	99.05	hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN47811.2	5.4e-76	73.27	hypothetical protein Csa_018925 [Cucumis sativus]	[more]
KAA0064730.1	1.0e-74	73.18	putative transmembrane protein [Cucumis melo var. makuwa]	[more]
XP_023002698.1	1.3e-64	66.36	uncharacterized protein LOC111496482 [Cucurbita maxima]	[more]
KAG6585751.1	8.5e-53	63.82	hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh05G004420.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11970.1	4.2e-18	51.46	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	1.2e-12	48.31	Protein of unknown function (DUF3511)	[more]
AT3G13910.1	5.5e-10	57.63	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	3.6e-09	51.67	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	1.8e-08	50.00	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 45..89 e-value: 2.2E-24 score: 85.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..206
None	No IPR available	PANTHER	PTHR36801:SF3	OS06G0150200 PROTEIN	coord: 92..300
None	No IPR available	PANTHER	PTHR36801	OS06G0150200 PROTEIN	coord: 92..300

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh05G004420	CmoCh05G004420	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G004420.1:exon:7026	CmoCh05G004420.1:exon:7026	exon
CmoCh05G004420.1:exon:7027	CmoCh05G004420.1:exon:7027	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G004420.1:cds	CmoCh05G004420.1:cds	CDS
CmoCh05G004420.1:cds	CmoCh05G004420.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh05G004420.1	CmoCh05G004420.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity