CmoCh04G021370.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G021370.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cmo_Chr04: 14553336 .. 14553692 (+)
Sequence length	357
RNA-Seq Expression	CmoCh04G021370.1
Synteny	CmoCh04G021370.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTTCATGGCCACTTTCATGTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGATGACTATCTCGCGCTTCAAAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAATACCGTGGCCACGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACTGAGCCGTACGGGGAAAACATAGCCGTTGGGTACTACCCTAAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGTGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

mRNA sequence

ATGGCCGCTTTCATGGCCACTTTCATGTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGATGACTATCTCGCGCTTCAAAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAATACCGTGGCCACGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACTGAGCCGTACGGGGAAAACATAGCCGTTGGGTACTACCCTAAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGTGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

Coding sequence (CDS)

ATGGCCGCTTTCATGGCCACTTTCATGTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCGATGACTATCTCGCGCTTCAAAACCGCGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAATACCGTGGCCACGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACTGAGCCGTACGGGGAAAACATAGCCGTTGGGTACTACCCTAAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGTGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGTGA

Protein sequence

MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDCAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW

Homology

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BLAST of CmoCh04G021370.1 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.7e-34
Identity = 67/118 (56.78%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           + A   TF  L+  + AQN+P DYL   N AR QVGVGPM W N +A YAQ YA +R GD
Sbjct: 7   IVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 66

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           C MIHS  PYGEN+A   +P+   A AVK+W +EK  YD+ SN CVGG CGHYTQ+VW
Sbjct: 67  CGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-28
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 3   AFMATFMFLLAL---TNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKG 62
           + + T + +LA+     AQN+P DYLA+ N ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 63  DCAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 119
           DC +IHS    GEN+A G    FTG  AV+LW +E+P Y++A+N+CVGG+ CGHYTQ+VW
Sbjct: 67  DCNLIHSGA--GENLAKG-GGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVW 123

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           +  F+A    L+  + AQ++P DYL + N+AR  VGVGPMQW   VA YA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           C +IHS  PYGEN+A G     +G  AV +W +EK  Y++A+N C  G CGHYTQ+VW
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 125

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy Swiss-Prot
Match: P04284 (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27
Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 3   AFMATFMFLLAL---TNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKG 62
           + + T + +LA+     AQN+P DYLA+ N ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 63  DCAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 119
           DC +IHS    GEN+A G    FTG  AV+LW +E+P Y++A+N+CVGG +C HYTQ+VW
Sbjct: 67  DCNLIHSGA--GENLAKG-GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVW 123

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.0e-26
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 4   FMATFMFLLAL--TNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDC 63
           F+A F+  +    + AQ   +++L   N AR +VGVGPM W + +A YAQ YA +R  DC
Sbjct: 6   FVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDC 65

Query: 64  AMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGE-CGHYTQMVW 119
            MIHS  PYGEN+A   +P+   A AVK+W +EK  YD+ SN C  G+ CGHYTQ+VW
Sbjct: 66  GMIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVW 122

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy TrEMBL
Match: A0A6J1IJP6 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474225 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.4e-59
Identity = 109/118 (92.37%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFM TF+FLLALT AQNAPDDYLAL NRARA+VGVGPMQWSNTVATY QAYAEKRKGD
Sbjct: 1   MAAFMVTFIFLLALTKAQNAPDDYLALHNRARAEVGVGPMQWSNTVATYGQAYAEKRKGD 60

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 118

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy TrEMBL
Match: A0A6J1IC05 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473363 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 109/118 (92.37%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFM TF+FLLALT AQNAP DYLAL NRARA+VGVGPMQWSNTVA YAQAYAEKRKGD
Sbjct: 36  MAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGD 95

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIAVGYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 96  CAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 153

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58
Identity = 108/118 (91.53%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           M AF+ATF+FLLALTNAQNAP DYL L NRARAQVGVGPMQWSNTVA YAQAYAEKRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLVLHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy TrEMBL
Match: A0A6J1H381 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459977 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58
Identity = 108/118 (91.53%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           M AF+ATF+FLLALTNAQNAP DYLAL NRARAQVGVGPMQWSNTVA YAQAYA+KRKGD
Sbjct: 9   MVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 68

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYPKFTGADAVKLW NEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 69  CAMIHSTGPYGENIAAGYYPKFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58
Identity = 108/118 (91.53%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFM TF+FLLALT AQNAP DYLAL NRARA+VGVGPMQWSNTVA YAQAYAEKRKGD
Sbjct: 9   MAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 4.0e-59
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFMATFMFLLALTNAQNAP DYLAL NRARAQVGV PMQWSNTVA YAQAYAEKRKGD
Sbjct: 9   MAAFMATFMFLLALTNAQNAPSDYLALHNRARAQVGVDPMQWSNTVAAYAQAYAEKRKGD 68

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. NCBI nr
Match: XP_022975184.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 236.9 bits (603), Expect = 9.0e-59
Identity = 109/118 (92.37%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFM TF+FLLALT AQNAPDDYLAL NRARA+VGVGPMQWSNTVATY QAYAEKRKGD
Sbjct: 1   MAAFMVTFIFLLALTKAQNAPDDYLALHNRARAEVGVGPMQWSNTVATYGQAYAEKRKGD 60

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 61  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 118

[Close]

BLAST of CmoCh04G021370.1 vs. NCBI nr
Match: XP_023521428.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 9.0e-59
Identity = 110/118 (93.22%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFMATF+FLLALTNAQNAP DYLAL NRARAQVGVGPMQWSNTVA YAQAYAEKRKGD
Sbjct: 9   MAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGD 68

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYT MVW
Sbjct: 69  CAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTHMVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. NCBI nr
Match: XP_023522018.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58
Identity = 109/117 (93.16%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 2   AAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDC 61
           AAFMATF+FLL LTNAQNAP DYLAL NRARAQVGVGPMQWSNTVA YAQAYAEKRKGDC
Sbjct: 10  AAFMATFIFLLVLTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQAYAEKRKGDC 69

Query: 62  AMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           AMIHST PYGENIA GYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 70  AMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. NCBI nr
Match: XP_022974676.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 235.3 bits (599), Expect = 2.6e-58
Identity = 109/118 (92.37%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           MAAFM TF+FLLALT AQNAP DYLAL NRARA+VGVGPMQWSNTVA YAQAYAEKRKGD
Sbjct: 36  MAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGD 95

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           CAMIHST PYGENIAVGYYP+FTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW
Sbjct: 96  CAMIHSTGPYGENIAVGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 153

[Close]

BLAST of CmoCh04G021370.1 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-31
Identity = 60/110 (54.55%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 10  FLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDCAMIHSTEP 69
           FL+  TNAQN P DYL   N ARAQVGV  + W  T+A YA  Y+  RK DC ++HS  P
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 70  YGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 119
           YGEN+A G    F+   AVKLW +EKP Y +A N C GG +C HYTQ+VW
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVW 125

[Close]

BLAST of CmoCh04G021370.1 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-28
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 8   FMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDCAMIHST 67
           F+ L+    AQ++P D+LA+ NRARA+VGVGP++W   VA YA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 68  EPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCV-GGECGHYTQMVW 119
             YGENIA       TG  AV +W +E+  YD+ SN C    +CGHYTQ+VW
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVW 127

[Close]

BLAST of CmoCh04G021370.1 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-28
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 1   MAAFMATFMFLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGD 60
           +  F+A    L+  + AQ++P DYL + N+AR  VGVGPMQW   VA YA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CAMIHSTEPYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVW 119
           C +IHS  PYGEN+A G     +G  AV +W +EK  Y++A+N C  G CGHYTQ+VW
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 125

[Close]

BLAST of CmoCh04G021370.1 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-28
Identity = 60/111 (54.05%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 10  FLLALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDCAMIHST-E 69
           FL+  TNAQNA  DYL   N ARAQVGV  + W   VA YA  YA  RK DC++  ST  
Sbjct: 16  FLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGG 75

Query: 70  PYGENIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVGG-ECGHYTQMVW 119
            YGEN+A G    FTG  AV LW NEKP Y++ +N C+G  +C HYTQ+VW
Sbjct: 76  SYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVW 126

[Close]

BLAST of CmoCh04G021370.1 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 117.5 bits (293), Expect = 7.4e-27
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 13  ALTNAQNAPDDYLALQNRARAQVGVGPMQWSNTVATYAQAYAEKRKGDCAMIHSTEPYGE 72
           A  N    P + L + N+ARA VGVGPM W+ T+ATYAQ+YA +R  DCAM HS  P+GE
Sbjct: 34  ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 73  NIAVGYYPKFTGADAVKLWANEKPLYDHASNKCVG-GECGHYTQMVW 119
           N+A G +   +G  A + W  EK  YD+ SN C G G CGHYTQ+VW
Sbjct: 94  NLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVW 139

The following BLAST results are available for this feature:

BLAST of CmoCh04G021370.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	4.7e-34	56.78	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q04108	6.5e-28	53.33	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P33154	1.9e-27	49.15	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P04284	3.2e-27	52.50	Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=...	[more]
Q08697	8.0e-26	48.31	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CmoCh04G021370.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJP6	4.4e-59	92.37	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IC05	1.3e-58	92.37	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EQJ7	2.8e-58	91.53	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H381	2.8e-58	91.53	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I475	3.7e-58	91.53	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmoCh04G021370.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522017.1	4.0e-59	94.07	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975184.1	9.0e-59	92.37	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_023521428.1	9.0e-59	93.22	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023522018.1	2.0e-58	93.16	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974676.1	2.6e-58	92.37	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]

BLAST of CmoCh04G021370.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	8.5e-31	54.55	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	1.0e-28	52.68	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.4e-28	49.15	pathogenesis-related gene 1	[more]
AT1G50050.1	3.9e-28	54.05	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	7.4e-27	52.34	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 87..100 score: 38.5 coord: 110..118 score: 41.92 coord: 40..58 score: 35.73
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 12..118
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 40..58 score: 28.62 coord: 85..100 score: 30.47 coord: 109..118 score: 38.44
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..118 e-value: 2.7E-22 score: 90.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 25..118 e-value: 2.9E-14 score: 54.0
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 14..118 e-value: 7.3E-26 score: 93.1
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 19..118
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 12..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G021370	CmoCh04G021370	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G021370.1:exon:11	CmoCh04G021370.1:exon:11	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G021370.1:cds	CmoCh04G021370.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G021370.1	CmoCh04G021370.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane