CmoCh04G010100.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G010100.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	2S sulfur-rich seed storage protein 2-like
Location	Cmo_Chr04: 5079817 .. 5080855 (-)
Sequence length	751
RNA-Seq Expression	CmoCh04G010100.1
Synteny	CmoCh04G010100.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTTCCACGTCTCGTGCATGCATTCCTTCCTTACCCCTTCAAATACCCACCCTTCTAGCCCCCCACCATAATCTTCATACTCAACGTTAACAATGGCCAGACACCCATTTTCCCTCCTCCTCCTCCTCTCCCTCTTCCTCCTCGCCGCCTCCGCCCTCCGCTTCCACGATGACAACCAAAGACCCTGGTTGCAGAGGTGCCGCCAACAGGTTCAAACACTATATTTTAATATCAGTATACTTTGAACATAAGCGATAATATTTATTCATTATATAAATATATGATCATTTTTTAAATCTTCTATTCTATAGTCAAAGACCTCCATTACTAATGGAGAAGACCTCAGACTCAGATAATATTTATTCATTATATATATAAATTTATGATCGACTTAGTAATGGAGATAATATTTATGGATGATATAAATCCATGATCATTCTCTAAATTAGCAGATGTGAGACCATAATTATATTTACAAATTTGTTGAAATGATACAGGTTAGGGGCGAGCGGCTCCGCCACTGCGAGCAGCTGCTGATGAGGCCGCGCCGCGTCCGCCAGCTTTTAATGGCTGAAGAAGAAGAAGATGCGGTGGAGCACCTGGAGCAGTGCTGCCAGCAGCTACGGGGAATGGACGACGCGTGCCGGTGCGAGGGGTTGCGGCAGATCGTGCAGCGACGTAGACAGCAAGGGAGAATGCAAGGGATCGATGTCGGGCAAATGCTGGAGAGAGCTACGAACTTGCCGTCCGTGTGTAGGCTCAGCCAACGCCGCTGCGAACTCCGCTCCTCCCGGTGGTAGAATGGTAGAATGAGAAACAAAATGAGAGCCCATTGAGGTCAAAAACTGAAAAATGGAGTAATAATCAATAAAATGTGACACCTCCTCGTCTTAGTGGGAGATGTGTCCTACTGTTTAAAGCCACATCCCTTGCCGTTTTTTTTTCTTTTTGGTTGTTTTTCTTTTTATTTCTTTTTGTGGAATAAAATGTCGTCGTTAGTTAATCCTCATAAATCTTAAGTTCTCTTATTATTATTA

mRNA sequence

AAGTTTCCACGTCTCGTGCATGCATTCCTTCCTTACCCCTTCAAATACCCACCCTTCTAGCCCCCCACCATAATCTTCATACTCAACGTTAACAATGGCCAGACACCCATTTTCCCTCCTCCTCCTCCTCTCCCTCTTCCTCCTCGCCGCCTCCGCCCTCCGCTTCCACGATGACAACCAAAGACCCTGGTTGCAGAGGTGCCGCCAACAGGTTAGGGGCGAGCGGCTCCGCCACTGCGAGCAGCTGCTGATGAGGCCGCGCCGCGTCCGCCAGCTTTTAATGGCTGAAGAAGAAGAAGATGCGGTGGAGCACCTGGAGCAGTGCTGCCAGCAGCTACGGGGAATGGACGACGCGTGCCGGTGCGAGGGGTTGCGGCAGATCGTGCAGCGACGTAGACAGCAAGGGAGAATGCAAGGGATCGATGTCGGGCAAATGCTGGAGAGAGCTACGAACTTGCCGTCCGTGTGTAGGCTCAGCCAACGCCGCTGCGAACTCCGCTCCTCCCGGTGGTAGAATGGTAGAATGAGAAACAAAATGAGAGCCCATTGAGGTCAAAAACTGAAAAATGGAGTAATAATCAATAAAATGTGACACCTCCTCGTCTTAGTGGGAGATGTGTCCTACTGTTTAAAGCCACATCCCTTGCCGTTTTTTTTTCTTTTTGGTTGTTTTTCTTTTTATTTCTTTTTGTGGAATAAAATGTCGTCGTTAGTTAATCCTCATAAATCTTAAGTTCTCTTATTATTATTA

Coding sequence (CDS)

ATGGCCAGACACCCATTTTCCCTCCTCCTCCTCCTCTCCCTCTTCCTCCTCGCCGCCTCCGCCCTCCGCTTCCACGATGACAACCAAAGACCCTGGTTGCAGAGGTGCCGCCAACAGGTTAGGGGCGAGCGGCTCCGCCACTGCGAGCAGCTGCTGATGAGGCCGCGCCGCGTCCGCCAGCTTTTAATGGCTGAAGAAGAAGAAGATGCGGTGGAGCACCTGGAGCAGTGCTGCCAGCAGCTACGGGGAATGGACGACGCGTGCCGGTGCGAGGGGTTGCGGCAGATCGTGCAGCGACGTAGACAGCAAGGGAGAATGCAAGGGATCGATGTCGGGCAAATGCTGGAGAGAGCTACGAACTTGCCGTCCGTGTGTAGGCTCAGCCAACGCCGCTGCGAACTCCGCTCCTCCCGGTGGTAG

Protein sequence

MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSSRW

Homology

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy Swiss-Prot
Match: P93198 (2S albumin seed storage protein (Fragment) OS=Juglans regia OX=51240 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-15
Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 9   LLLLSLFLLAASALRF---------HDDNQRPWLQRCRQQV-RGERLRHCEQLLMRPRRV 68
           LL+  LF+  A+A R            DN R   + CR+Q+ R + L HC+  L +  R 
Sbjct: 3   LLVALLFVANAAAFRTTITTMEIDEDIDNPRRRGEGCREQIQRQQNLNHCQYYLRQQSRS 62

Query: 69  RQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERA 128
                  +E++  +H  QCCQQL  MD+ C+CEGLRQ+V+R++QQ  ++G ++ +M++ A
Sbjct: 63  G----GYDEDNQRQHFRQCCQQLSQMDEQCQCEGLRQVVRRQQQQQGLRGEEMEEMVQSA 122

Query: 129 TNLPSVCRLSQRRCELRSS 138
            +LP+ C +S +RCE+R S
Sbjct: 123 RDLPNECGISSQRCEIRRS 137

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy Swiss-Prot
Match: P0C8Y8 (2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 0


Query: 34  QRCRQQV-RGERLRHCEQLLMRP------RRVRQLLMAEEEEDAVEHLEQCCQQLRGMDD 93
           Q+CR+Q+ R ++L HC   L +       +  R L   EE      HL++CC+QL  MD+
Sbjct: 45  QQCREQMERQQQLNHCRMYLRQQMEESPYQNPRPLRRGEE-----PHLDECCEQLERMDE 104

Query: 94  ACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCEL 135
            CRCEGLR +++R+R++  +QG  + +++ +A NL S C LS +RC +
Sbjct: 105 MCRCEGLRMMLRRQREEMELQGEQMQRIMRKAENLLSRCNLSPQRCPM 147

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy Swiss-Prot
Match: P04403 (2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa OX=3645 GN=BE2S1 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-10
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 7   SLLLLLSL-----FLLAASALRFHDDNQRPWLQRCRQQV-RGERLRHCEQLLMRPRRVRQ 66
           +LL+L++L     F    +     ++NQ    + CR+Q+ R + L HC ++ MR +    
Sbjct: 10  ALLVLMALGHATAFRATVTTTVVEEENQ----EECREQMQRQQMLSHC-RMYMRQQMEES 69

Query: 67  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQG-RMQGIDVGQMLERAT 126
                       H+ +CC+QL GMD++CRCEGLR ++ R +Q+  + +G  + +M+  A 
Sbjct: 70  PYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMMRMQQEEMQPRGEQMRRMMRLAE 129

Query: 127 NLPSVCRLSQRRCELRSS 138
           N+PS C LS  RC +  S
Sbjct: 130 NIPSRCNLSPMRCPMGGS 142

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy Swiss-Prot
Match: Q39649 (2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-10
Identity = 44/137 (32.12%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 7   SLLLLLSLFLLAASALRFH--------DDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRV 66
           S++ L ++ LL A A  +         ++N++   +RCRQ    E LR CEQ L +  R 
Sbjct: 6   SIIALFAVALLVADAYAYRTTITTVEVEENRQGREERCRQMSAREELRSCEQYLRQQSRD 65

Query: 67  RQLLMAEEEEDAVE--HLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLE 126
              +   E     E    ++CC++L+ +D+ CRC+ L +I +  ++Q R  G +  QML+
Sbjct: 66  VLQMRGIENPWRREGGSFDECCRELKNVDEECRCDMLEEIAREEQRQAR--GQEGRQMLQ 125

Query: 127 RATNLPSVCRLSQRRCE 134
           +A NLPS+C +  +RC+
Sbjct: 126 KARNLPSMCGIRPQRCD 140

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy Swiss-Prot
Match: P01089 (2S albumin OS=Ricinus communis OX=3988 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 31  PWLQRCRQQVRGER-LRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACR 90
           P  Q CR Q++ ++ LR C++ + +    +    ++ +E     L  CC  L+ M   CR
Sbjct: 157 PSQQGCRGQIQEQQNLRQCQEYIKQQVSGQGPRRSDNQE---RSLRGCCDHLKQMQSQCR 216

Query: 91  CEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRC 133
           CEGLRQ +++++ QG++QG DV +    A NLPS+C +S   C
Sbjct: 217 CEGLRQAIEQQQSQGQLQGQDVFEAFRTAANLPSMCGVSPTEC 256

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy TrEMBL
Match: A0A6J1FPC9 (2S sulfur-rich seed storage protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447600 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ
Sbjct: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60

Query: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN
Sbjct: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120

Query: 121 LPSVCRLSQRRCELRSSRW 140
           LPSVCRLSQRRCELRSSRW
Sbjct: 121 LPSVCRLSQRRCELRSSRW 139

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy TrEMBL
Match: A0A6J1JBK8 (2S sulfur-rich seed storage protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482974 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MARHPFSLLLLLSLFLLAASALRFHDDNQ PWLQRCRQQVRGERLRHCEQLLMRPRRVRQ
Sbjct: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQNPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60

Query: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           LLMAEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN
Sbjct: 61  LLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120

Query: 121 LPSVCRLSQRRCELRSSRW 140
           LPSVCRLSQRRCELRSSRW
Sbjct: 121 LPSVCRLSQRRCELRSSRW 139

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy TrEMBL
Match: A0A1S3CJQ3 (2S sulfur-rich seed storage protein 2-like OS=Cucumis melo OX=3656 GN=LOC103501607 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLL--AASALRFHDDN--QRPWLQRCRQQVR-GERLRHCEQLLMRP 60
           M+  P   +LLLSLFLL  AAS  +F D+N  QRPWLQRCRQQ+R GERLRHCE+LL RP
Sbjct: 34  MSTKPLVSILLLSLFLLAVAASDHQFDDENQRQRPWLQRCRQQIRGGERLRHCERLLTRP 93

Query: 61  RRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQML 120
           RR RQLL AEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQI+QRRRQQG++QG+DVGQML
Sbjct: 94  RRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIIQRRRQQGQLQGMDVGQML 153

Query: 121 ERATNLPSVCRLSQRRCELRSS 138
           ERATNLPSVCRLS+RRC+LRS+
Sbjct: 154 ERATNLPSVCRLSRRRCDLRST 175

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy TrEMBL
Match: A0A0A0L7P7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G078820 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.4e-50
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFL--LAASALRFHDDN--QRPWLQRCRQQVR-GERLRHCEQLLMRP 60
           M+  P   +LLLSLFL  +AAS  +F DDN  QRPWLQRCRQQ+R GERLRHCE+LL +P
Sbjct: 1   MSTKPLVSILLLSLFLFAVAASDHQFDDDNQSQRPWLQRCRQQIRSGERLRHCERLLTQP 60

Query: 61  RRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQML 120
           RR R LL AEEEEDAVEHLE+CCQQL+GMDDACRCEGLRQIVQRRRQQG++QG+DVGQML
Sbjct: 61  RRFRLLLAAEEEEDAVEHLEECCQQLKGMDDACRCEGLRQIVQRRRQQGQLQGVDVGQML 120

Query: 121 ERATNLPSVCRLSQRRCELRSS 138
           ERATNLPSVCRLS+RRC+LRS+
Sbjct: 121 ERATNLPSVCRLSRRRCDLRST 142

[Close]

BLAST of CmoCh04G010100.1 vs. ExPASy TrEMBL
Match: A0A2I0JHZ1 (2S albumin-like OS=Punica granatum OX=22663 GN=LOC116213024 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.2e-16
Identity = 51/112 (45.54%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 26  DDNQ--RPWLQRCRQQV-RGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEQCCQQLR 85
           D+NQ  R   Q+CR+Q+ R ++L HC+Q+L R  R   L M   E+   E L+QCCQQLR
Sbjct: 36  DENQSRRGGRQQCREQIQRQQQLFHCQQVLTRGGRYIVLGMRGAEDSNPESLQQCCQQLR 95

Query: 86  GMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCEL 135
            +++ CRC+G+ +IVQ ++QQGR+QG  + ++++ A NLP++CRLS +RC +
Sbjct: 96  QVEEQCRCQGIEEIVQIQQQQGRLQGQRLREVIQTAENLPNMCRLSPQRCSV 147

[Close]

BLAST of CmoCh04G010100.1 vs. NCBI nr
Match: XP_022942616.1 (2S sulfur-rich seed storage protein 2-like [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 4.6e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ
Sbjct: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60

Query: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN
Sbjct: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120

Query: 121 LPSVCRLSQRRCELRSSRW 140
           LPSVCRLSQRRCELRSSRW
Sbjct: 121 LPSVCRLSQRRCELRSSRW 139

[Close]

BLAST of CmoCh04G010100.1 vs. NCBI nr
Match: KAG6600762.1 (hypothetical protein SDJN03_05995, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ
Sbjct: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60

Query: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           L+MAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN
Sbjct: 61  LVMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120

Query: 121 LPSVCRLSQRRCELRSSRW 140
           LPSVCRLSQRRCELRSSRW
Sbjct: 121 LPSVCRLSQRRCELRSSRW 139

[Close]

BLAST of CmoCh04G010100.1 vs. NCBI nr
Match: XP_022984798.1 (2S sulfur-rich seed storage protein 2-like [Cucurbita maxima])

HSP 1 Score: 271.6 bits (693), Expect = 3.9e-69
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MARHPFSLLLLLSLFLLAASALRFHDDNQ PWLQRCRQQVRGERLRHCEQLLMRPRRVRQ
Sbjct: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQNPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60

Query: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           LLMAEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN
Sbjct: 61  LLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120

Query: 121 LPSVCRLSQRRCELRSSRW 140
           LPSVCRLSQRRCELRSSRW
Sbjct: 121 LPSVCRLSQRRCELRSSRW 139

[Close]

BLAST of CmoCh04G010100.1 vs. NCBI nr
Match: XP_023522829.1 (2S sulfur-rich seed storage protein 2-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.3 bits (630), Expect = 7.8e-62
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ
Sbjct: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQRPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60

Query: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN
Sbjct: 61  LLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120

Query: 121 LPSVC 126
           LPSVC
Sbjct: 121 LPSVC 125

[Close]

BLAST of CmoCh04G010100.1 vs. NCBI nr
Match: XP_008463441.1 (PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MARHPFSLLLLLSLFLL--AASALRFHDDN--QRPWLQRCRQQVR-GERLRHCEQLLMRP 60
           M+  P   +LLLSLFLL  AAS  +F D+N  QRPWLQRCRQQ+R GERLRHCE+LL RP
Sbjct: 34  MSTKPLVSILLLSLFLLAVAASDHQFDDENQRQRPWLQRCRQQIRGGERLRHCERLLTRP 93

Query: 61  RRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQML 120
           RR RQLL AEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQI+QRRRQQG++QG+DVGQML
Sbjct: 94  RRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIIQRRRQQGQLQGMDVGQML 153

Query: 121 ERATNLPSVCRLSQRRCELRSS 138
           ERATNLPSVCRLS+RRC+LRS+
Sbjct: 154 ERATNLPSVCRLSRRRCDLRST 175

[Close]

BLAST of CmoCh04G010100.1 vs. TAIR 10
Match: AT5G54740.1 (seed storage albumin 5 )

HSP 1 Score: 42.0 bits (97), Expect = 4.7e-04
Identity = 41/155 (26.45%), Postives = 72/155 (46.45%), Query Frame = 0


Query: 12  LSLFLLAASALRFH--------DDNQRPWLQRC-RQQVRGERLRHCEQLLMRPRRVRQLL 71
           L+LF+L A+A  +         DD   P   +C R+ ++ ++LR C+Q +   +R +Q  
Sbjct: 11  LALFILLANASIYRTVVEFEEDDDVSNPQQGKCQREFMKHQQLRGCKQWIR--KRAQQGR 70

Query: 72  MAEEEED-------------------AVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQ 131
           +  E +D                       L+ CC +LR +D  C C  L++  Q+ R Q
Sbjct: 71  IGYEADDFELTLDVDLEDDENPMGPQQQSSLKMCCNELRQVDKMCVCPTLKKAAQQVRFQ 130

Query: 132 GRMQGIDVGQMLERATNLPSVCRL-SQRRCELRSS 138
           G      V  + + A NLP+VC++ +   C+ ++S
Sbjct: 131 GMHGQQQVQHVFQTAKNLPNVCKIPTVGSCQFKAS 163

The following BLAST results are available for this feature:

BLAST of CmoCh04G010100.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93198	1.5e-15	37.41	2S albumin seed storage protein (Fragment) OS=Juglans regia OX=51240 PE=1 SV=1	[more]
P0C8Y8	1.0e-11	37.96	2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 P...	[more]
P04403	4.2e-10	32.61	2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa OX=3645 GN=BE2S1 P...	[more]
Q39649	7.2e-10	32.12	2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1	[more]
P01089	3.6e-09	34.95	2S albumin OS=Ricinus communis OX=3988 PE=1 SV=2	[more]

BLAST of CmoCh04G010100.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPC9	2.2e-70	100.00	2S sulfur-rich seed storage protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JBK8	1.9e-69	98.56	2S sulfur-rich seed storage protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3CJQ3	5.1e-51	78.87	2S sulfur-rich seed storage protein 2-like OS=Cucumis melo OX=3656 GN=LOC1035016...	[more]
A0A0A0L7P7	7.4e-50	77.46	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G078820 PE=3 SV...	[more]
A0A2I0JHZ1	3.2e-16	45.54	2S albumin-like OS=Punica granatum OX=22663 GN=LOC116213024 PE=3 SV=1	[more]

BLAST of CmoCh04G010100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942616.1	4.6e-70	100.00	2S sulfur-rich seed storage protein 2-like [Cucurbita moschata]	[more]
KAG6600762.1	1.0e-69	99.28	hypothetical protein SDJN03_05995, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022984798.1	3.9e-69	98.56	2S sulfur-rich seed storage protein 2-like [Cucurbita maxima]	[more]
XP_023522829.1	7.8e-62	100.00	2S sulfur-rich seed storage protein 2-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_008463441.1	1.1e-50	78.87	PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo]	[more]

BLAST of CmoCh04G010100.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54740.1	4.7e-04	26.45	seed storage albumin 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	PANTHER	PTHR35496:SF4	2S SEED STORAGE PROTEIN 1-RELATED	coord: 3..137
None	No IPR available	PANTHER	PTHR35496	2S SEED STORAGE PROTEIN 1-RELATED	coord: 3..137
IPR000617	Napin/ Bra allergen	PRINTS	PR00496	NAPIN	coord: 111..125 score: 39.33 coord: 34..55 score: 20.91 coord: 76..93 score: 40.0 coord: 93..106 score: 28.93
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 48..132 e-value: 1.6E-7 score: 41.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 48..131 e-value: 6.7E-10 score: 39.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..138 e-value: 1.5E-21 score: 78.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 11..132
IPR044723	AAI/SS protein, conserved domain	CDD	cd00261	AAI_SS	coord: 34..131 e-value: 3.93637E-7 score: 43.9307

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G010100	CmoCh04G010100	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G010100.1:exon:6043	CmoCh04G010100.1:exon:6043	exon
CmoCh04G010100.1:exon:6042	CmoCh04G010100.1:exon:6042	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G010100.1:three_prime_utr	CmoCh04G010100.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G010100.1:cds	CmoCh04G010100.1:cds_2	CDS
CmoCh04G010100.1:cds	CmoCh04G010100.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G010100.1:five_prime_utr	CmoCh04G010100.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G010100.1	CmoCh04G010100.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0045735	nutrient reservoir activity