CmoCh04G009880.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G009880.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr04: 4984574 .. 4986823 (+)
Sequence length	1275
RNA-Seq Expression	CmoCh04G009880.1
Synteny	CmoCh04G009880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTGCGACTGCGCGCCACTTCCTGAAACACCTCCAAACCGTGCTACGGGAATTCAGATGAAATATGTACACCGTCCATTCCATCGACTCAATTCGAAAACTCCGCAAGTCAGACGGTCTGCAAACGTCCACAATGTAAATGGAGGTATTTTGAACGATGGGTTCAACGATGTAAATGGGTTCAACAATGGCCTGAAAATGGAGGTATTTTGAAGAAACTTTCAGAAGCCTCCAAACACAGAAATCGCTAATCTGGATTGCGAGTTTCTTTAACCCCACAAAAGTTTCAGCGTCCAAAAATGATGCCCATCAAGTCCTATGATCATTGGGCTTTTCTGGTATACTTTCTTGTTCTTGAATCATTTCATATTCTAGGATTCACTGGTTTTTTATTTTTTTGATTCTTATGGGAAAAAGGATATTTGATTGGTTAACTTCATACCCTCTTTCATATTTTGGTTTAATTTGTTAATATTATTTTTCGTTCTTTGTTTGCGTTCTTCCATTTTTCTTTTTTTTTTTTTGGATTTCTTGTGCAGAATTGATTGATTTTTCAATGTTTGATATCCTAGGTTTTCCATTTCGACCGCTGGTTTCTTGTGCAATTGATTATATTTGTTGTTTTCTGTTCATCAAATAATCCTGTCTATTCAAGTCACATTTCTCTTATTTTACTTGTGTTTGAGAATCAAGGGGGGAAGATAATGCCCAGTTATCCTGGAAATTGCTTCAGTTTTAACGATTCAGAATCTCAGATGAGAATCAGAATGCTTAGAGAGAGAAACGATGACCTTGCCTCATACATTTTCTACGTTTTTGTATTTGGGAATGATATTGATTTTAAAAATTAATCTTACAAAACCACGCATACTTGCACTTATTTCATAATGGGGCCGTATTTGTTCTTTTGGTGTGTAATTTCTGATTGAAACAGGAAGAAATTGAAGCACCCATGTGGGTTGATCTCACCTTAGAAGGGAAGTCCAAAAATCAGAACATGTGAGTATTTGATATAACTTGTGATGGTATATGTCAGATTAATATGCATTTCATGCCATTTTTTTCTTTTTAATTCCCCATATTCTCTTACTTTGATTGCAGTGATGATAAATGGTTCTGTACATACCACCCGTAAGCATCCTTGATTGTTTTTCCATTTGCAGAATAGATGTGAAACATTTCTTTTTCTTCATGATTTAGTTCTCTTTGTTTTCCTTAAAAACCAATGAACATGCCAGGGTCCACCAAACTTCCTCTCATGACCTGAAATCAGAATTTTCTCAGCTGTTTGAGGAAGCAAAGGCTTTAGATTTTGAATTATTGGTGTATTCTATTCCAAAAATTCTCACCTCTGTCTCAAGATCAAGAGGGAGAGATTTTGACAACAATAAATCGAAAGGTATCGGTCAGGATTTTGCAATGGACAAGCAAGTCATAGTTGAGGAGCTGAGTTCAGGATCAGCAGCCACTAAATGGAAGCCGAGGCCAAAGCCGAGCTTTACAGACTCAAAAAGAATCTTGAGTTCAGATCCAAGTTTGGTTTCTATTGCAACCTGTTTAACTGGAAATGCAATGCTAAATGTTTCAGCTACTGGTTCGAGTCCAGTGGGAAAGGAGCCAGCTGACAGCAGAACTGGTATCAGTCATCGACAACCGCATAAGCCAATGTTGGCAACAAGTCAAACATTGGGCCATTCTAGTAGACTTTTGTCAGATATGAGATGTCTCAGGAAAAGCTGTGTCATTAGTCAACAAGCATCAAGATTGGAGGATAATAGCCGTCAAAGGCAGTCAAGCGGCCATCACTCTTCTTTGAATAATTCAAGCGTATGCTCCTCTTTGAATCCTGGTTTTGGTGCCAAGAGTATCACCAACACTACTAGCTTTCCCAGGATGACTCAAGCAGCAATGAACAAAGACAAAGTTGCAAGCGTATGCTCAAGCACATTAATAATTCAAGTGGAAGATGCAAGTTCCAACACAAGGAGGGTCGGGAAACTCTATAATGATAAGCCAGTCCACCTCAAGCCTTCAAAACCAAAGGTAACTCCTGAATCAAACTTAAGGTTTTCTTGCAATCAATTTTCTTTCAGGGAGATGTGTTTAATCTTTTTTGTTTCTCATCAGATACTTCGTCCAAAAGTATCACTACTACAGAAAAAGGATGAGCGTAACACTTGTTTAAAGCCAAATAAACAGGATTTGGCTGGAACCGCTAGATGCAAAACCGTTGTAGCTGGAAAGTAG

mRNA sequence

ATGATTTGCGACTGCGCGCCACTTCCTGAAACACCTCCAAACCGTGCTACGGGAATTCAGATGAAATATGTACACCGTCCATTCCATCGACTCAATTCGAAAACTCCGCAAGTCAGACGGTCTGCAAACGTCCACAATGTAAATGGAGGTATTTTGAACGATGGGTTCAACGATGTAAATGGGTTCAACAATGGCCTGAAAATGGAGCGTCCAAAAATGATGCCCATCAAGTCCTATGATCATTGGGCTTTTCTGGAAGAAATTGAAGCACCCATGTGGGTTGATCTCACCTTAGAAGGGAAGTCCAAAAATCAGAACATTGATGATAAATGGTTCTGTACATACCACCCGGTCCACCAAACTTCCTCTCATGACCTGAAATCAGAATTTTCTCAGCTGTTTGAGGAAGCAAAGGCTTTAGATTTTGAATTATTGGTGTATTCTATTCCAAAAATTCTCACCTCTGTCTCAAGATCAAGAGGGAGAGATTTTGACAACAATAAATCGAAAGGTATCGGTCAGGATTTTGCAATGGACAAGCAAGTCATAGTTGAGGAGCTGAGTTCAGGATCAGCAGCCACTAAATGGAAGCCGAGGCCAAAGCCGAGCTTTACAGACTCAAAAAGAATCTTGAGTTCAGATCCAAGTTTGGTTTCTATTGCAACCTGTTTAACTGGAAATGCAATGCTAAATGTTTCAGCTACTGGTTCGAGTCCAGTGGGAAAGGAGCCAGCTGACAGCAGAACTGGTATCAGTCATCGACAACCGCATAAGCCAATGTTGGCAACAAGTCAAACATTGGGCCATTCTAGTAGACTTTTGTCAGATATGAGATGTCTCAGGAAAAGCTGTGTCATTAGTCAACAAGCATCAAGATTGGAGGATAATAGCCGTCAAAGGCAGTCAAGCGGCCATCACTCTTCTTTGAATAATTCAAGCGTATGCTCCTCTTTGAATCCTGGTTTTGGTGCCAAGAGTATCACCAACACTACTAGCTTTCCCAGGATGACTCAAGCAGCAATGAACAAAGACAAAGTTGCAAGCGTATGCTCAAGCACATTAATAATTCAAGTGGAAGATGCAAGTTCCAACACAAGGAGGGTCGGGAAACTCTATAATGATAAGCCAGTCCACCTCAAGCCTTCAAAACCAAAGATACTTCGTCCAAAAGTATCACTACTACAGAAAAAGGATGAGCGTAACACTTGTTTAAAGCCAAATAAACAGGATTTGGCTGGAACCGCTAGATGCAAAACCGTTGTAGCTGGAAAGTAG

Coding sequence (CDS)

ATGATTTGCGACTGCGCGCCACTTCCTGAAACACCTCCAAACCGTGCTACGGGAATTCAGATGAAATATGTACACCGTCCATTCCATCGACTCAATTCGAAAACTCCGCAAGTCAGACGGTCTGCAAACGTCCACAATGTAAATGGAGGTATTTTGAACGATGGGTTCAACGATGTAAATGGGTTCAACAATGGCCTGAAAATGGAGCGTCCAAAAATGATGCCCATCAAGTCCTATGATCATTGGGCTTTTCTGGAAGAAATTGAAGCACCCATGTGGGTTGATCTCACCTTAGAAGGGAAGTCCAAAAATCAGAACATTGATGATAAATGGTTCTGTACATACCACCCGGTCCACCAAACTTCCTCTCATGACCTGAAATCAGAATTTTCTCAGCTGTTTGAGGAAGCAAAGGCTTTAGATTTTGAATTATTGGTGTATTCTATTCCAAAAATTCTCACCTCTGTCTCAAGATCAAGAGGGAGAGATTTTGACAACAATAAATCGAAAGGTATCGGTCAGGATTTTGCAATGGACAAGCAAGTCATAGTTGAGGAGCTGAGTTCAGGATCAGCAGCCACTAAATGGAAGCCGAGGCCAAAGCCGAGCTTTACAGACTCAAAAAGAATCTTGAGTTCAGATCCAAGTTTGGTTTCTATTGCAACCTGTTTAACTGGAAATGCAATGCTAAATGTTTCAGCTACTGGTTCGAGTCCAGTGGGAAAGGAGCCAGCTGACAGCAGAACTGGTATCAGTCATCGACAACCGCATAAGCCAATGTTGGCAACAAGTCAAACATTGGGCCATTCTAGTAGACTTTTGTCAGATATGAGATGTCTCAGGAAAAGCTGTGTCATTAGTCAACAAGCATCAAGATTGGAGGATAATAGCCGTCAAAGGCAGTCAAGCGGCCATCACTCTTCTTTGAATAATTCAAGCGTATGCTCCTCTTTGAATCCTGGTTTTGGTGCCAAGAGTATCACCAACACTACTAGCTTTCCCAGGATGACTCAAGCAGCAATGAACAAAGACAAAGTTGCAAGCGTATGCTCAAGCACATTAATAATTCAAGTGGAAGATGCAAGTTCCAACACAAGGAGGGTCGGGAAACTCTATAATGATAAGCCAGTCCACCTCAAGCCTTCAAAACCAAAGATACTTCGTCCAAAAGTATCACTACTACAGAAAAAGGATGAGCGTAACACTTGTTTAAAGCCAAATAAACAGGATTTGGCTGGAACCGCTAGATGCAAAACCGTTGTAGCTGGAAAGTAG

Protein sequence

MICDCAPLPETPPNRATGIQMKYVHRPFHRLNSKTPQVRRSANVHNVNGGILNDGFNDVNGFNNGLKMERPKMMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQLFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSAATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGISHRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNSSVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLYNDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK

Homology

[Close]

BLAST of CmoCh04G009880.1 vs. ExPASy TrEMBL
Match: A0A6J1FPP5 (uncharacterized protein LOC111447670 OS=Cucurbita moschata OX=3662 GN=LOC111447670 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.5e-194
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ
Sbjct: 1   MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA
Sbjct: 61  LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 252
           ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS
Sbjct: 121 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 180

Query: 253 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 312
           HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS
Sbjct: 181 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 240

Query: 313 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY 372
           SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY
Sbjct: 241 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY 300

Query: 373 NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK 425
           NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK
Sbjct: 301 NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK 352

[Close]

BLAST of CmoCh04G009880.1 vs. ExPASy TrEMBL
Match: A0A6J1K3M1 (uncharacterized protein LOC111489758 OS=Cucurbita maxima OX=3661 GN=LOC111489758 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 1.3e-169
Identity = 324/357 (90.76%), Postives = 328/357 (91.88%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWF TYHPVHQTSSHDLKSEFSQ
Sbjct: 1   MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFYTYHPVHQTSSHDLKSEFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEEAKALDFELLVYSIP+ILTSVSRSRGRDFDN KSKGI QDFAMDKQVIVEELSSGSA
Sbjct: 61  LFEEAKALDFELLVYSIPRILTSVSRSRGRDFDNKKSKGICQDFAMDKQVIVEELSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 252
           ATKWKPRPK SFTDSKRILSSDPSLVSIATCLTGNAMLNVSATG SP GKEPADSRTGIS
Sbjct: 121 ATKWKPRPKRSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGFSPGGKEPADSRTGIS 180

Query: 253 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 312
            R PHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQA RLEDN   RQSSGHH      
Sbjct: 181 PRPPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQAPRLEDN---RQSSGHH------ 240

Query: 313 SVCSSLNPGFGAKSITNTT----SFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRV 372
              SSLNPGFGAKSITN+T    SF RMT AAMNKDKV+SVCSSTLIIQVEDASSNTRRV
Sbjct: 241 ---SSLNPGFGAKSITNSTRSSGSFRRMTHAAMNKDKVSSVCSSTLIIQVEDASSNTRRV 300

Query: 373 GKLYNDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQD-LAGTARCKTVVAGK 425
           GKLYNDKPVHLKPSKPKILRPKVSLLQ KDERNTCLKPNKQ+ LAGTARCKTVVAGK
Sbjct: 301 GKLYNDKPVHLKPSKPKILRPKVSLLQNKDERNTCLKPNKQECLAGTARCKTVVAGK 345

[Close]

BLAST of CmoCh04G009880.1 vs. ExPASy TrEMBL
Match: A0A6J1JAR4 (uncharacterized protein LOC111483281 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483281 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97
Identity = 229/374 (61.23%), Postives = 268/374 (71.66%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           M+ IKS +HWAFLEEIEAPMWVDLTLEG+S NQNIDDKWF T+HPVHQ+SSHDLK  FSQ
Sbjct: 1   MVLIKSNNHWAFLEEIEAPMWVDLTLEGRSNNQNIDDKWFFTHHPVHQSSSHDLKLAFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEE + L+FE+ V S   +  SVSRSRG DF++ K KG  Q FAMDK ++ E+LSSGSA
Sbjct: 61  LFEE-RTLNFEISVSSSLNLPNSVSRSRG-DFEDKKCKGSCQGFAMDKHIVSEKLSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSR---- 252
                   K S+TDSK I SS+ SLVS A+CLT N+  NVS TGSS  GKEPADSR    
Sbjct: 121 T-------KLSYTDSKGISSSNMSLVSYASCLTENSRPNVSVTGSSSEGKEPADSRTSST 180

Query: 253 --TGISHRQPHKPMLATSQTLGHSSRLLSDM-RCLRKSCVISQQASRLEDNSRQRQSSGH 312
             TG+  +Q  K    TSQ L  SSRLLSDM R LRKSC  ++Q SRLE N+ QRQSSGH
Sbjct: 181 IITGLGRQQQCKATEVTSQPLSMSSRLLSDMRRSLRKSCA-NRQVSRLEVNNCQRQSSGH 240

Query: 313 HSSLNNSS-VCSSLNPGFGAKSITNTT-----------SFPRMTQAAMNKDKVASVCSST 372
           +SS +NSS  CSSLNPGF AKSITNT+           +F RMTQ A+NK K +SV SST
Sbjct: 241 NSSSSNSSTTCSSLNPGFDAKSITNTSEQHLKSSVGVGNFSRMTQTAINKSKDSSVFSST 300

Query: 373 LIIQVEDASSNTRRVGKLY--NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQD- 425
           L I V+DASSN+RRV K Y    K  HL+ SKPKILRPK  LLQ+++ + TCL+P K++ 
Sbjct: 301 LKIPVKDASSNSRRVSKFYAKPTKLAHLESSKPKILRPKAPLLQQRNLQKTCLQPKKKES 360

[Close]

BLAST of CmoCh04G009880.1 vs. ExPASy TrEMBL
Match: A0A6J1J493 (uncharacterized protein LOC111483281 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483281 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97
Identity = 229/374 (61.23%), Postives = 268/374 (71.66%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           M+ IKS +HWAFLEEIEAPMWVDLTLEG+S NQNIDDKWF T+HPVHQ+SSHDLK  FSQ
Sbjct: 1   MVLIKSNNHWAFLEEIEAPMWVDLTLEGRSNNQNIDDKWFFTHHPVHQSSSHDLKLAFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEE + L+FE+ V S   +  SVSRSRG DF++ K KG  Q FAMDK ++ E+LSSGSA
Sbjct: 61  LFEE-RTLNFEISVSSSLNLPNSVSRSRG-DFEDKKCKGSCQGFAMDKHIVSEKLSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSR---- 252
                   K S+TDSK I SS+ SLVS A+CLT N+  NVS TGSS  GKEPADSR    
Sbjct: 121 T-------KLSYTDSKGISSSNMSLVSYASCLTENSRPNVSVTGSSSEGKEPADSRTSST 180

Query: 253 --TGISHRQPHKPMLATSQTLGHSSRLLSDM-RCLRKSCVISQQASRLEDNSRQRQSSGH 312
             TG+  +Q  K    TSQ L  SSRLLSDM R LRKSC  ++Q SRLE N+ QRQSSGH
Sbjct: 181 IITGLGRQQQCKATEVTSQPLSMSSRLLSDMRRSLRKSCA-NRQVSRLEVNNCQRQSSGH 240

Query: 313 HSSLNNSS-VCSSLNPGFGAKSITNTT-----------SFPRMTQAAMNKDKVASVCSST 372
           +SS +NSS  CSSLNPGF AKSITNT+           +F RMTQ A+NK K +SV SST
Sbjct: 241 NSSSSNSSTTCSSLNPGFDAKSITNTSEQHLKSSVGVGNFSRMTQTAINKSKDSSVFSST 300

Query: 373 LIIQVEDASSNTRRVGKLY--NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQD- 425
           L I V+DASSN+RRV K Y    K  HL+ SKPKILRPK  LLQ+++ + TCL+P K++ 
Sbjct: 301 LKIPVKDASSNSRRVSKFYAKPTKLAHLESSKPKILRPKAPLLQQRNLQKTCLQPKKKES 360

[Close]

BLAST of CmoCh04G009880.1 vs. ExPASy TrEMBL
Match: A0A6J1JD08 (uncharacterized protein LOC111483281 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111483281 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91
Identity = 216/362 (59.67%), Postives = 257/362 (70.99%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           M+ IKS +HWAFLEEIEAPMWVDLTLEG+S NQNIDDKWF T+HPVHQ+SSHDLK  FSQ
Sbjct: 1   MVLIKSNNHWAFLEEIEAPMWVDLTLEGRSNNQNIDDKWFFTHHPVHQSSSHDLKLAFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEE + L+FE+ V S   +  SVSRSRG DF++ K KG  Q FAMDK ++ E+LSSGSA
Sbjct: 61  LFEE-RTLNFEISVSSSLNLPNSVSRSRG-DFEDKKCKGSCQGFAMDKHIVSEKLSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSR---- 252
                   K S+TDSK I SS+ SLVS A+CLT N+  NVS TGSS  GKEPADSR    
Sbjct: 121 T-------KLSYTDSKGISSSNMSLVSYASCLTENSRPNVSVTGSSSEGKEPADSRTSST 180

Query: 253 --TGISHRQPHKPMLATSQTLGHSSRLLSDM-RCLRKSCVISQQASRLEDNSRQRQSSGH 312
             TG+  +Q  K    TSQ L  SSRLLSDM R LRKSC  ++Q SRLE N+ QRQSSGH
Sbjct: 181 IITGLGRQQQCKATEVTSQPLSMSSRLLSDMRRSLRKSCA-NRQVSRLEVNNCQRQSSGH 240

Query: 313 HSSLNNSSVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNT 372
           +SS +NSS+ ++       KS     +F RMTQ A+NK K +SV SSTL I V+DASSN+
Sbjct: 241 NSSSSNSSITNTSEQHL--KSSVGVGNFSRMTQTAINKSKDSSVFSSTLKIPVKDASSNS 300

Query: 373 RRVGKLY--NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQD-LAGTARCKTVVA 425
           RRV K Y    K  HL+ SKPKILRPK  LLQ+++ + TCL+P K++ L G  RCKTVVA
Sbjct: 301 RRVSKFYAKPTKLAHLESSKPKILRPKAPLLQQRNLQKTCLQPKKKESLDGIGRCKTVVA 350

[Close]

BLAST of CmoCh04G009880.1 vs. NCBI nr
Match: XP_022942715.1 (uncharacterized protein LOC111447670 [Cucurbita moschata] >XP_022942716.1 uncharacterized protein LOC111447670 [Cucurbita moschata])

HSP 1 Score: 688.7 bits (1776), Expect = 3.1e-194
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ
Sbjct: 1   MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA
Sbjct: 61  LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 252
           ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS
Sbjct: 121 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 180

Query: 253 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 312
           HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS
Sbjct: 181 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 240

Query: 313 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY 372
           SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY
Sbjct: 241 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY 300

Query: 373 NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK 425
           NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK
Sbjct: 301 NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQDLAGTARCKTVVAGK 352

[Close]

BLAST of CmoCh04G009880.1 vs. NCBI nr
Match: XP_023538227.1 (uncharacterized protein LOC111799046 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 663.3 bits (1710), Expect = 1.4e-186
Identity = 342/353 (96.88%), Postives = 347/353 (98.30%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWF TYHPVHQTSSHDLKSEFS+
Sbjct: 1   MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFYTYHPVHQTSSHDLKSEFSR 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEEAKALDFELLVY+IPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA
Sbjct: 61  LFEEAKALDFELLVYTIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 252
           ATKWKPRPKPSFTDSKRILSSDPSLVS+ATCLTGNAMLNVSATGSSP GKEPADSR GIS
Sbjct: 121 ATKWKPRPKPSFTDSKRILSSDPSLVSVATCLTGNAMLNVSATGSSPGGKEPADSRIGIS 180

Query: 253 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 312
           HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS
Sbjct: 181 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 240

Query: 313 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY 372
           SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKV+SVCSSTLIIQVEDASSNTRRVGKLY
Sbjct: 241 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVSSVCSSTLIIQVEDASSNTRRVGKLY 300

Query: 373 NDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQD-LAGTARCKTVVAGK 425
           NDKPVHLKPSKPKILRPKVSLLQKKDE NTCLKPNKQ+ LAGTA CKTVVAGK
Sbjct: 301 NDKPVHLKPSKPKILRPKVSLLQKKDECNTCLKPNKQECLAGTAGCKTVVAGK 353

[Close]

BLAST of CmoCh04G009880.1 vs. NCBI nr
Match: XP_023538205.1 (uncharacterized protein LOC111799046 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538213.1 uncharacterized protein LOC111799046 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538221.1 uncharacterized protein LOC111799046 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 656.4 bits (1692), Expect = 1.7e-184
Identity = 342/360 (95.00%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNI-------DDKWFCTYHPVHQTSSHD 132
           MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNI       DDKWF TYHPVHQTSSHD
Sbjct: 1   MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNICSYFDCSDDKWFYTYHPVHQTSSHD 60

Query: 133 LKSEFSQLFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVE 192
           LKSEFS+LFEEAKALDFELLVY+IPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVE
Sbjct: 61  LKSEFSRLFEEAKALDFELLVYTIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVE 120

Query: 193 ELSSGSAATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPA 252
           ELSSGSAATKWKPRPKPSFTDSKRILSSDPSLVS+ATCLTGNAMLNVSATGSSP GKEPA
Sbjct: 121 ELSSGSAATKWKPRPKPSFTDSKRILSSDPSLVSVATCLTGNAMLNVSATGSSPGGKEPA 180

Query: 253 DSRTGISHRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGH 312
           DSR GISHRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGH
Sbjct: 181 DSRIGISHRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGH 240

Query: 313 HSSLNNSSVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNT 372
           HSSLNNSSVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKV+SVCSSTLIIQVEDASSNT
Sbjct: 241 HSSLNNSSVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVSSVCSSTLIIQVEDASSNT 300

Query: 373 RRVGKLYNDKPVHLKPSKPKILRPKVSLLQKKDERNTCLKPNKQD-LAGTARCKTVVAGK 425
           RRVGKLYNDKPVHLKPSKPKILRPKVSLLQKKDE NTCLKPNKQ+ LAGTA CKTVVAGK
Sbjct: 301 RRVGKLYNDKPVHLKPSKPKILRPKVSLLQKKDECNTCLKPNKQECLAGTAGCKTVVAGK 360

[Close]

BLAST of CmoCh04G009880.1 vs. NCBI nr
Match: KAG6600742.1 (hypothetical protein SDJN03_05975, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 625.9 bits (1613), Expect = 2.5e-175
Identity = 321/329 (97.57%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 73  MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFCTYHPVHQTSSHDLKSEFSQ 132
           MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWF TYHPVHQTSSHDLKSEFSQ
Sbjct: 1   MMPIKSYDHWAFLEEIEAPMWVDLTLEGKSKNQNIDDKWFYTYHPVHQTSSHDLKSEFSQ 60

Query: 133 LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 192
           LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA
Sbjct: 61  LFEEAKALDFELLVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSA 120

Query: 193 ATKWKPRPKPSFTDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGIS 252
           ATKWKP+PKPSFTDS+RILSSDPSLVSIATCLTGNAMLNVSATGSSP GKEPADSRTGIS
Sbjct: 121 ATKWKPKPKPSFTDSQRILSSDPSLVSIATCLTGNAMLNVSATGSSPGGKEPADSRTGIS 180

Query: 253 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 312
           HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS
Sbjct: 181 HRQPHKPMLATSQTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNS 240

Query: 313 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLY 372
           SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKV+ VCSSTLIIQVEDASSNTRRVGKLY
Sbjct: 241 SVCSSLNPGFGAKSITNTTSFPRMTQAAMNKDKVSRVCSSTLIIQVEDASSNTRRVGKLY 300

Query: 373 NDKPVHLKPSKPKILRPKVSLLQKKDERN 402
           NDKPVHLKPSKPKILRPKVSLL KKDER+
Sbjct: 301 NDKPVHLKPSKPKILRPKVSLLHKKDERS 329

[Close]

BLAST of CmoCh04G009880.1 vs. NCBI nr
Match: XP_023538233.1 (uncharacterized protein LOC111799046 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 614.8 bits (1584), Expect = 5.7e-172
Identity = 323/341 (94.72%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 92  MWVDLTLEGKSKNQNI-------DDKWFCTYHPVHQTSSHDLKSEFSQLFEEAKALDFEL 151
           MWVDLTLEGKSKNQNI       DDKWF TYHPVHQTSSHDLKSEFS+LFEEAKALDFEL
Sbjct: 1   MWVDLTLEGKSKNQNICSYFDCSDDKWFYTYHPVHQTSSHDLKSEFSRLFEEAKALDFEL 60

Query: 152 LVYSIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSAATKWKPRPKPSF 211
           LVY+IPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSAATKWKPRPKPSF
Sbjct: 61  LVYTIPKILTSVSRSRGRDFDNNKSKGIGQDFAMDKQVIVEELSSGSAATKWKPRPKPSF 120

Query: 212 TDSKRILSSDPSLVSIATCLTGNAMLNVSATGSSPVGKEPADSRTGISHRQPHKPMLATS 271
           TDSKRILSSDPSLVS+ATCLTGNAMLNVSATGSSP GKEPADSR GISHRQPHKPMLATS
Sbjct: 121 TDSKRILSSDPSLVSVATCLTGNAMLNVSATGSSPGGKEPADSRIGISHRQPHKPMLATS 180

Query: 272 QTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNSSVCSSLNPGFGA 331
           QTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNSSVCSSLNPGFGA
Sbjct: 181 QTLGHSSRLLSDMRCLRKSCVISQQASRLEDNSRQRQSSGHHSSLNNSSVCSSLNPGFGA 240

Query: 332 KSITNTTSFPRMTQAAMNKDKVASVCSSTLIIQVEDASSNTRRVGKLYNDKPVHLKPSKP 391
           KSITNTTSFPRMTQAAMNKDKV+SVCSSTLIIQVEDASSNTRRVGKLYNDKPVHLKPSKP
Sbjct: 241 KSITNTTSFPRMTQAAMNKDKVSSVCSSTLIIQVEDASSNTRRVGKLYNDKPVHLKPSKP 300

Query: 392 KILRPKVSLLQKKDERNTCLKPNKQD-LAGTARCKTVVAGK 425
           KILRPKVSLLQKKDE NTCLKPNKQ+ LAGTA CKTVVAGK
Sbjct: 301 KILRPKVSLLQKKDECNTCLKPNKQECLAGTAGCKTVVAGK 341

The following BLAST results are available for this feature:

BLAST of CmoCh04G009880.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh04G009880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPP5	1.5e-194	100.00	uncharacterized protein LOC111447670 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1K3M1	1.3e-169	90.76	uncharacterized protein LOC111489758 OS=Cucurbita maxima OX=3661 GN=LOC111489758...	[more]
A0A6J1JAR4	2.2e-97	61.23	uncharacterized protein LOC111483281 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J493	2.2e-97	61.23	uncharacterized protein LOC111483281 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JD08	4.1e-91	59.67	uncharacterized protein LOC111483281 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh04G009880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942715.1	3.1e-194	100.00	uncharacterized protein LOC111447670 [Cucurbita moschata] >XP_022942716.1 unchar...	[more]
XP_023538227.1	1.4e-186	96.88	uncharacterized protein LOC111799046 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023538205.1	1.7e-184	95.00	uncharacterized protein LOC111799046 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6600742.1	2.5e-175	97.57	hypothetical protein SDJN03_05975, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538233.1	5.7e-172	94.72	uncharacterized protein LOC111799046 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh04G009880.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..269

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G009880	CmoCh04G009880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G009880.1:exon:5061	CmoCh04G009880.1:exon:5061	exon
CmoCh04G009880.1:exon:5062	CmoCh04G009880.1:exon:5062	exon
CmoCh04G009880.1:exon:5063	CmoCh04G009880.1:exon:5063	exon
CmoCh04G009880.1:exon:5064	CmoCh04G009880.1:exon:5064	exon
CmoCh04G009880.1:exon:5065	CmoCh04G009880.1:exon:5065	exon
CmoCh04G009880.1:exon:5066	CmoCh04G009880.1:exon:5066	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G009880.1:cds	CmoCh04G009880.1:cds	CDS
CmoCh04G009880.1:cds	CmoCh04G009880.1:cds_2	CDS
CmoCh04G009880.1:cds	CmoCh04G009880.1:cds_3	CDS
CmoCh04G009880.1:cds	CmoCh04G009880.1:cds_4	CDS
CmoCh04G009880.1:cds	CmoCh04G009880.1:cds_5	CDS
CmoCh04G009880.1:cds	CmoCh04G009880.1:cds_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G009880.1	CmoCh04G009880.1-protein	polypeptide