CmoCh03G011210.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G011210.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transcription repressor
Location	Cmo_Chr03: 8987384 .. 8987845 (+)
Sequence length	462
RNA-Seq Expression	CmoCh03G011210.1
Synteny	CmoCh03G011210.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCGCCGGAGAAATCTCCAACTCACCTCCCTCTCCGTCGATCTCAACATTTGCAGACCAAAACTCTCTCACCTCTTCCACCATCTCAAACCAAAGTCCTCCTCCAAATCCCCCAATCATTGCTTCTCCTCCGACTCCGATTCGCCGCCTTTCTCCGACTCTGACTCCGATACCAGAGCCTCCATCACCTTCCGTGGCTTCGGAAAGTCCGGCGGCGAGAGCGTCGCCGTCGAGAAGGATTCGGACGATCCGTACCTCGATTTCCGGCATTCAATGGTTCAGATGATTCTGGAGAACGAGATATACTCGAAGGATGACTTACGAGGGCTCCTTCGCTGTTTCTTGCAGTTGAATTCCCCTTCTCACCATGAAATTATAATTAGGGCTTTTGCTGAGATTTGGGACTCTGTTTTCTCTGCCAGGTTCCCGGTTTCTCCCCCGATCTTCCGCTTTTGA

mRNA sequence

ATGGCGGCTCGCCGGAGAAATCTCCAACTCACCTCCCTCTCCGTCGATCTCAACATTTGCAGACCAAAACTCTCTCACCTCTTCCACCATCTCAAACCAAAGTCCTCCTCCAAATCCCCCAATCATTGCTTCTCCTCCGACTCCGATTCGCCGCCTTTCTCCGACTCTGACTCCGATACCAGAGCCTCCATCACCTTCCGTGGCTTCGGAAAGTCCGGCGGCGAGAGCGTCGCCGTCGAGAAGGATTCGGACGATCCGTACCTCGATTTCCGGCATTCAATGGTTCAGATGATTCTGGAGAACGAGATATACTCGAAGGATGACTTACGAGGGCTCCTTCGCTGTTTCTTGCAGTTGAATTCCCCTTCTCACCATGAAATTATAATTAGGGCTTTTGCTGAGATTTGGGACTCTGTTTTCTCTGCCAGGTTCCCGGTTTCTCCCCCGATCTTCCGCTTTTGA

Coding sequence (CDS)

ATGGCGGCTCGCCGGAGAAATCTCCAACTCACCTCCCTCTCCGTCGATCTCAACATTTGCAGACCAAAACTCTCTCACCTCTTCCACCATCTCAAACCAAAGTCCTCCTCCAAATCCCCCAATCATTGCTTCTCCTCCGACTCCGATTCGCCGCCTTTCTCCGACTCTGACTCCGATACCAGAGCCTCCATCACCTTCCGTGGCTTCGGAAAGTCCGGCGGCGAGAGCGTCGCCGTCGAGAAGGATTCGGACGATCCGTACCTCGATTTCCGGCATTCAATGGTTCAGATGATTCTGGAGAACGAGATATACTCGAAGGATGACTTACGAGGGCTCCTTCGCTGTTTCTTGCAGTTGAATTCCCCTTCTCACCATGAAATTATAATTAGGGCTTTTGCTGAGATTTGGGACTCTGTTTTCTCTGCCAGGTTCCCGGTTTCTCCCCCGATCTTCCGCTTTTGA

Protein sequence

MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLNSPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF

Homology

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy Swiss-Prot
Match: Q3EAL1 (Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 1   MAARRRNLQLTSLS-VDL---NICRPKLSHLFHHL--KPKSSSKSPNHCFSSDSDSPPFS 60
           MA + +   L ++S VD+   N  +P  + +F+    KPK  S +  HC SS S + P S
Sbjct: 1   MATKSKKKILKTVSVVDISCGNCIKPTFASIFNFFSKKPKRPSSTYRHCHSSISSATPSS 60

Query: 61  DSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLR 120
              +                 SVAVEKDSDDPYLDFR SM+QMILEN+IYSKD+LR LL+
Sbjct: 61  TPLATA---------------SVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQ 120

Query: 121 CFLQLNSPSHHEIIIRAFAEIWDSVFSA 143
           CFL LNS  HH II+RAF+EIW+ V SA
Sbjct: 121 CFLSLNSHYHHGIIVRAFSEIWEDVSSA 133

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy Swiss-Prot
Match: Q3E9B4 (Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 47  DSDSPPFSDSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSK 106
           + D     D DSDT  S        S  ES AV K S DPY DFR SMV+MI+E +I++ 
Sbjct: 126 EGDKEESEDDDSDTLFSSRSFSSDSSKAESFAVVKKSKDPYEDFRTSMVEMIVERQIFAP 185

Query: 107 DDLRGLLRCFLQLNSPSHHEIIIRAFAEIWDSVFS 142
            +L+ LL+CFL LNS  HH++I++ F EI+ ++FS
Sbjct: 186 AELQQLLQCFLSLNSRQHHKVIVQVFLEIYATLFS 220

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy Swiss-Prot
Match: Q94CV1 (Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14
Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 44  FSSDSDSPPFSDSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEI 103
           F+   D     D     +    +R   K   ESVAV  +S +PY DFR SMVQM++E EI
Sbjct: 125 FARGGDVGGHDDEQQQLQEQAPYRRVAK---ESVAVAVESAEPYEDFRESMVQMVVEKEI 184

Query: 104 YSKDDLRGLLRCFLQLNSPSHHEIIIRAFAEIW--DSVFSARFP 146
           Y+ DDL  LL  FL LNSP HH +I+ AFA++W  + +FS   P
Sbjct: 185 YAWDDLNDLLHQFLSLNSPRHHPLILHAFADLWTRNGLFSPPSP 225

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy Swiss-Prot
Match: Q9ZU65 (Transcription repressor OFP7 OS=Arabidopsis thaliana OX=3702 GN=OFP7 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 75  ESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLNSPSHHEIIIRAFAE 134
           E VAV K S+DPY DF+ SM++MI+E +++   +L  LL CFL LN+  HH  I+RAF+E
Sbjct: 226 EGVAVVKKSEDPYEDFKGSMMEMIVEKKMFEVAELEQLLSCFLSLNAKRHHRAIVRAFSE 285

Query: 135 IWDSVFS 142
           IW ++FS
Sbjct: 286 IWVALFS 292

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy Swiss-Prot
Match: F4HNU8 (Transcription repressor OFP4 OS=Arabidopsis thaliana OX=3702 GN=OFP4 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.1e-10
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 20  CRPKLSHLFHHLKP--KSSSKSPNHCFSSDSDSPPFSDSDSDTRASITFRGFGKSGGESV 79
           CR K  H    +    +SS+KSP     + S     S   S +R+        K   +S 
Sbjct: 192 CRTKKKHQKTLVSSGRRSSAKSPRIKLRARSPRIQVSPRRSKSRSQ------NKQILDSF 251

Query: 80  AVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLNSPSHHEIIIRAFAEIWD 139
           AV K S DP  DFR SMV+MI EN I + +D+  LL C+L LN   +H++II+ F ++W 
Sbjct: 252 AVIKSSIDPSKDFRESMVEMIAENNIRTSNDMEDLLVCYLTLNPKEYHDLIIKVFVQVWL 311

Query: 140 SVFSARF 145
            V ++ F
Sbjct: 312 EVINSTF 312

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy TrEMBL
Match: A0A6J1EDP8 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111433229 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.4e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60
           MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT
Sbjct: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60

Query: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120
           RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN
Sbjct: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120

Query: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF
Sbjct: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 153

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy TrEMBL
Match: A0A6J1IPR9 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111478821 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.9e-78
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60
           MAARRRNL LTSLSVDLNICRPKLSHLFHHLKPKSSSKS NHCFSSDSDSPPFSDSDSDT
Sbjct: 1   MAARRRNLPLTSLSVDLNICRPKLSHLFHHLKPKSSSKSSNHCFSSDSDSPPFSDSDSDT 60

Query: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120
           RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN
Sbjct: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120

Query: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF
Sbjct: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 153

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy TrEMBL
Match: A0A6J1HEC8 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111463422 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68
Identity = 141/157 (89.81%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPN-HCFS---SDSDSPPFSDS 60
           MA RRRNL LTSLSVDLNICRPKLSHLF HLKPK S+KSP+ H FS   SDSDSPPFSDS
Sbjct: 1   MATRRRNLPLTSLSVDLNICRPKLSHLF-HLKPKPSAKSPSLHHFSASASDSDSPPFSDS 60

Query: 61  DSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF 120
           DS+TRASITFRGFG+SGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF
Sbjct: 61  DSETRASITFRGFGRSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF 120

Query: 121 LQLNSPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           LQLNSPSHH II+RAFAEIWDSVFSAR PVSPPIFRF
Sbjct: 121 LQLNSPSHHGIIVRAFAEIWDSVFSARSPVSPPIFRF 156

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy TrEMBL
Match: A0A6J1HGU3 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111463422 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 131/153 (85.62%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60
           MA RRRNL LTSLSVDLNICRPKLSHLF HLKPK S+KSP+           FSDSDS+T
Sbjct: 1   MATRRRNLPLTSLSVDLNICRPKLSHLF-HLKPKPSAKSPS--------LHHFSDSDSET 60

Query: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120
           RASITFRGFG+SGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN
Sbjct: 61  RASITFRGFGRSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120

Query: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           SPSHH II+RAFAEIWDSVFSAR PVSPPIFRF
Sbjct: 121 SPSHHGIIVRAFAEIWDSVFSARSPVSPPIFRF 144

[Close]

BLAST of CmoCh03G011210.1 vs. ExPASy TrEMBL
Match: A0A0A0KKL0 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_6G454395 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62
Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPK-LSHLFHHLKPKSSSKSPNH------CFSSDSDSPPF 60
           MAA RRNLQLTSLSVDLNICRPK LSH FHHLKPK S KSPNH        SSDS+SPPF
Sbjct: 1   MAAPRRNLQLTSLSVDLNICRPKLLSHFFHHLKPKPSPKSPNHHHHRFSSASSDSESPPF 60

Query: 61  SDSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLL 120
           SDSDS+TR SITFRGFG+SGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSK+DLRGLL
Sbjct: 61  SDSDSETRTSITFRGFGRSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKEDLRGLL 120

Query: 121 RCFLQLNSPSHHEIIIRAFAEIWDSVFSARFPV 147
           RCFLQLNSPSHH II+RAF+EIWDSVFS+  P+
Sbjct: 121 RCFLQLNSPSHHGIIVRAFSEIWDSVFSSTSPI 153

[Close]

BLAST of CmoCh03G011210.1 vs. NCBI nr
Match: XP_022925974.1 (transcription repressor OFP6-like [Cucurbita moschata] >KAG6604326.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034478.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.0 bits (785), Expect = 9.2e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60
           MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT
Sbjct: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60

Query: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120
           RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN
Sbjct: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120

Query: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF
Sbjct: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 153

[Close]

BLAST of CmoCh03G011210.1 vs. NCBI nr
Match: XP_023544919.1 (transcription repressor OFP6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 7.8e-79
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60
           MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKS NHCFSSDSDSPPFSDSDSDT
Sbjct: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSSNHCFSSDSDSPPFSDSDSDT 60

Query: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120
           RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN
Sbjct: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120

Query: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF
Sbjct: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 153

[Close]

BLAST of CmoCh03G011210.1 vs. NCBI nr
Match: XP_022979076.1 (transcription repressor OFP6-like [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 3.9e-78
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDT 60
           MAARRRNL LTSLSVDLNICRPKLSHLFHHLKPKSSSKS NHCFSSDSDSPPFSDSDSDT
Sbjct: 1   MAARRRNLPLTSLSVDLNICRPKLSHLFHHLKPKSSSKSSNHCFSSDSDSPPFSDSDSDT 60

Query: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120
           RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN
Sbjct: 61  RASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLN 120

Query: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF
Sbjct: 121 SPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 153

[Close]

BLAST of CmoCh03G011210.1 vs. NCBI nr
Match: KAG6595162.1 (Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027177.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 8.1e-68
Identity = 141/157 (89.81%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPN-HCFS---SDSDSPPFSDS 60
           MA RRRNL LTSLSVDLNICRPKLSHLF HLKPK S+KSP+ H FS   SDSDSPPFSDS
Sbjct: 1   MATRRRNLPLTSLSVDLNICRPKLSHLF-HLKPKPSAKSPSLHRFSASASDSDSPPFSDS 60

Query: 61  DSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF 120
           DS+TRASITFRGFG+SGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF
Sbjct: 61  DSETRASITFRGFGRSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF 120

Query: 121 LQLNSPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           LQLNSPSHH II+RAFAEIWDSVFSAR PVSPPIFRF
Sbjct: 121 LQLNSPSHHGIIVRAFAEIWDSVFSARSPVSPPIFRF 156

[Close]

BLAST of CmoCh03G011210.1 vs. NCBI nr
Match: XP_022963122.1 (transcription repressor OFP6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 8.1e-68
Identity = 141/157 (89.81%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPN-HCFS---SDSDSPPFSDS 60
           MA RRRNL LTSLSVDLNICRPKLSHLF HLKPK S+KSP+ H FS   SDSDSPPFSDS
Sbjct: 1   MATRRRNLPLTSLSVDLNICRPKLSHLF-HLKPKPSAKSPSLHHFSASASDSDSPPFSDS 60

Query: 61  DSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF 120
           DS+TRASITFRGFG+SGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF
Sbjct: 61  DSETRASITFRGFGRSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCF 120

Query: 121 LQLNSPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF 154
           LQLNSPSHH II+RAFAEIWDSVFSAR PVSPPIFRF
Sbjct: 121 LQLNSPSHHGIIVRAFAEIWDSVFSARSPVSPPIFRF 156

[Close]

BLAST of CmoCh03G011210.1 vs. TAIR 10
Match: AT2G36026.1 (Ovate family protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.6e-27
Identity = 75/148 (50.68%), Postives = 92/148 (62.16%), Query Frame = 0


Query: 3   ARRRNLQLTSLS-VDL---NICRPKLSHLFH--HLKPKSSSKSPNHCFSSDSDSPPFSDS 62
           ++++ + L ++S VD+   N   P LS  F+    KP+  S +  HC SS   +   S +
Sbjct: 6   SKKKKMVLKAVSVVDIGCGNCKFPSLSSFFNPSPKKPRLYSSNYGHCHSSTPTTASSSSA 65

Query: 63  DSDTR--ASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLR 122
              T    S T          +VAVEKDSDDPYLDFR SM+QMILENEIYSK+DLR LL 
Sbjct: 66  VPSTSHWFSDTSSSSATPSAAAVAVEKDSDDPYLDFRQSMLQMILENEIYSKNDLRELLH 125

Query: 123 CFLQLNSPSHHEIIIRAFAEIWDSVFSA 143
           CFL LN P HH IIIRAF+EIWD VFSA
Sbjct: 126 CFLSLNEPYHHGIIIRAFSEIWDGVFSA 153

[Close]

BLAST of CmoCh03G011210.1 vs. TAIR 10
Match: AT3G52525.1 (ovate family protein 6 )

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 1   MAARRRNLQLTSLS-VDL---NICRPKLSHLFHHL--KPKSSSKSPNHCFSSDSDSPPFS 60
           MA + +   L ++S VD+   N  +P  + +F+    KPK  S +  HC SS S + P S
Sbjct: 1   MATKSKKKILKTVSVVDISCGNCIKPTFASIFNFFSKKPKRPSSTYRHCHSSISSATPSS 60

Query: 61  DSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLR 120
              +                 SVAVEKDSDDPYLDFR SM+QMILEN+IYSKD+LR LL+
Sbjct: 61  TPLATA---------------SVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQ 120

Query: 121 CFLQLNSPSHHEIIIRAFAEIWDSVFSA 143
           CFL LNS  HH II+RAF+EIW+ V SA
Sbjct: 121 CFLSLNSHYHHGIIVRAFSEIWEDVSSA 133

[Close]

BLAST of CmoCh03G011210.1 vs. TAIR 10
Match: AT5G19650.1 (ovate family protein 8 )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 47  DSDSPPFSDSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSK 106
           + D     D DSDT  S        S  ES AV K S DPY DFR SMV+MI+E +I++ 
Sbjct: 126 EGDKEESEDDDSDTLFSSRSFSSDSSKAESFAVVKKSKDPYEDFRTSMVEMIVERQIFAP 185

Query: 107 DDLRGLLRCFLQLNSPSHHEIIIRAFAEIWDSVFS 142
            +L+ LL+CFL LNS  HH++I++ F EI+ ++FS
Sbjct: 186 AELQQLLQCFLSLNSRQHHKVIVQVFLEIYATLFS 220

[Close]

BLAST of CmoCh03G011210.1 vs. TAIR 10
Match: AT2G18500.1 (ovate family protein 7 )

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15
Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 75  ESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLNSPSHHEIIIRAFAE 134
           E VAV K S+DPY DF+ SM++MI+E +++   +L  LL CFL LN+  HH  I+RAF+E
Sbjct: 226 EGVAVVKKSEDPYEDFKGSMMEMIVEKKMFEVAELEQLLSCFLSLNAKRHHRAIVRAFSE 285

Query: 135 IWDSVFS 142
           IW ++FS
Sbjct: 286 IWVALFS 292

[Close]

BLAST of CmoCh03G011210.1 vs. TAIR 10
Match: AT1G06920.1 (ovate family protein 4 )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 20  CRPKLSHLFHHLKP--KSSSKSPNHCFSSDSDSPPFSDSDSDTRASITFRGFGKSGGESV 79
           CR K  H    +    +SS+KSP     + S     S   S +R+        K   +S 
Sbjct: 192 CRTKKKHQKTLVSSGRRSSAKSPRIKLRARSPRIQVSPRRSKSRSQ------NKQILDSF 251

Query: 80  AVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLNSPSHHEIIIRAFAEIWD 139
           AV K S DP  DFR SMV+MI EN I + +D+  LL C+L LN   +H++II+ F ++W 
Sbjct: 252 AVIKSSIDPSKDFRESMVEMIAENNIRTSNDMEDLLVCYLTLNPKEYHDLIIKVFVQVWL 311

Query: 140 SVFSARF 145
            V ++ F
Sbjct: 312 EVINSTF 312

The following BLAST results are available for this feature:

BLAST of CmoCh03G011210.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EAL1	2.0e-24	48.65	Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1	[more]
Q3E9B4	2.8e-15	46.32	Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1	[more]
Q94CV1	1.8e-14	44.23	Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE...	[more]
Q9ZU65	1.2e-13	52.24	Transcription repressor OFP7 OS=Arabidopsis thaliana OX=3702 GN=OFP7 PE=2 SV=1	[more]
F4HNU8	6.1e-10	36.22	Transcription repressor OFP4 OS=Arabidopsis thaliana OX=3702 GN=OFP4 PE=1 SV=1	[more]

BLAST of CmoCh03G011210.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDP8	4.4e-80	100.00	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111433229 PE=4 SV=1	[more]
A0A6J1IPR9	1.9e-78	98.69	Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111478821 PE=4 SV=1	[more]
A0A6J1HEC8	3.9e-68	89.81	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111463422 PE=4 SV=1	[more]
A0A6J1HGU3	1.4e-62	85.62	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111463422 PE=4 SV=1	[more]
A0A0A0KKL0	4.2e-62	83.66	Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_6G454395 PE=4 SV=1	[more]

BLAST of CmoCh03G011210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925974.1	9.2e-80	100.00	transcription repressor OFP6-like [Cucurbita moschata] >KAG6604326.1 Transcripti...	[more]
XP_023544919.1	7.8e-79	99.35	transcription repressor OFP6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979076.1	3.9e-78	98.69	transcription repressor OFP6-like [Cucurbita maxima]	[more]
KAG6595162.1	8.1e-68	89.81	Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022963122.1	8.1e-68	89.81	transcription repressor OFP6-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CmoCh03G011210.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36026.1	9.6e-27	50.68	Ovate family protein	[more]
AT3G52525.1	1.4e-25	48.65	ovate family protein 6	[more]
AT5G19650.1	2.0e-16	46.32	ovate family protein 8	[more]
AT2G18500.1	8.4e-15	52.24	ovate family protein 7	[more]
AT1G06920.1	4.3e-11	36.22	ovate family protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 77..138 e-value: 1.4E-21 score: 74.5
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 83..139 e-value: 1.5E-23 score: 82.5
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 79..138 score: 18.101309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..61
None	No IPR available	PANTHER	PTHR33057:SF70	TRANSCRIPTION REPRESSOR OFP6	coord: 3..143
IPR038933	Ovate protein family	PANTHER	PTHR33057	TRANSCRIPTION REPRESSOR OFP7-RELATED	coord: 3..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh03G011210	CmoCh03G011210	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh03G011210.1:exon:10126	CmoCh03G011210.1:exon:10126	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh03G011210.1:cds	CmoCh03G011210.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh03G011210.1	CmoCh03G011210.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus