CmoCh02G010680.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G010680.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Glutaredoxin
Location	Cmo_Chr02: 6523936 .. 6524253 (+)
Sequence length	318
RNA-Seq Expression	CmoCh02G010680.1
Synteny	CmoCh02G010680.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGGTGAAGAGACTAGCAGCTGAGCATGAGGTGCTGATAATAAGCAAGACTTCATGCTGCCTTTGTTATGCAGTGAATGTGCTTCTAAGGGAGCTTGGAGTTAGCCCCTTGGTGTACGAGCTGGACCAGGACCCTGATGCCCGGGACATGGAGAAGGCTCTTGTAAGGCTACAAGGCTGCCATACGCCCCCCGTCCCCGCCGTCTTCATCGCTGGGGACCTCGTCGGCTCGACCAACGAAGTCATGTCGCTGCACCTCAGCGGAGAGCTGAATCGAATGTTGAAGCCCTTCAAGGTGGTTCAAGAGAACTAG

mRNA sequence

ATGGAAAGGGTGAAGAGACTAGCAGCTGAGCATGAGGTGCTGATAATAAGCAAGACTTCATGCTGCCTTTGTTATGCAGTGAATGTGCTTCTAAGGGAGCTTGGAGTTAGCCCCTTGGTGTACGAGCTGGACCAGGACCCTGATGCCCGGGACATGGAGAAGGCTCTTGTAAGGCTACAAGGCTGCCATACGCCCCCCGTCCCCGCCGTCTTCATCGCTGGGGACCTCGTCGGCTCGACCAACGAAGTCATGTCGCTGCACCTCAGCGGAGAGCTGAATCGAATGTTGAAGCCCTTCAAGGTGGTTCAAGAGAACTAG

Coding sequence (CDS)

ATGGAAAGGGTGAAGAGACTAGCAGCTGAGCATGAGGTGCTGATAATAAGCAAGACTTCATGCTGCCTTTGTTATGCAGTGAATGTGCTTCTAAGGGAGCTTGGAGTTAGCCCCTTGGTGTACGAGCTGGACCAGGACCCTGATGCCCGGGACATGGAGAAGGCTCTTGTAAGGCTACAAGGCTGCCATACGCCCCCCGTCCCCGCCGTCTTCATCGCTGGGGACCTCGTCGGCTCGACCAACGAAGTCATGTCGCTGCACCTCAGCGGAGAGCTGAATCGAATGTTGAAGCCCTTCAAGGTGGTTCAAGAGAACTAG

Protein sequence

MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQGCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN

Homology

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy Swiss-Prot
Match: O82255 (Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-27
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVV 103
           GC T  VPAVF+ G LVGSTNEVMSLHLSG L  ++KP++ +
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy Swiss-Prot
Match: O04341 (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana OX=3702 GN=GRXS9 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-27
Identity = 59/100 (59.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I SK+SCC+ YAV VL ++LGV P V+E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC T PVPA+F+ G L+GSTNEVMSLHLSG L  ++KPF+
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy Swiss-Prot
Match: Q9LYC5 (Glutaredoxin-C14 OS=Arabidopsis thaliana OX=3702 GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.4e-27
Identity = 58/100 (58.00%), Postives = 80/100 (80.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC    VPAVF++G LVGSTN+VMSLHLSG L  ++KP++
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQ 98

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy Swiss-Prot
Match: Q9M9Y9 (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana OX=3702 GN=GRXS11 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.1e-26
Identity = 57/99 (57.58%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCL YAV VL ++LGV+P ++E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPF 100
           GC + PVPAVFI G LVGSTNEVMS+HLS  L  ++KP+
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-24
Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 1  MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
          M+RV RLAA+  V+I S +SCC+C+ V  L  ELGV+P V ELD+DP  ++MEKAL RL 
Sbjct: 1  MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 61 GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLK 98
          G  +P VPAVFI G LVGST++VMSLHLSG L  +L+
Sbjct: 61 G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLR 96

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy TrEMBL
Match: A0A6J1H1U5 (glutaredoxin-C13-like OS=Cucurbita moschata OX=3662 GN=LOC111459664 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy TrEMBL
Match: A0A6J1JY66 (glutaredoxin-C13-like OS=Cucurbita maxima OX=3661 GN=LOC111490824 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.7e-51
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTP VPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPAVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy TrEMBL
Match: A0A5A7TF06 (Glutaredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00910 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy TrEMBL
Match: A0A0A0K5I6 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G230940 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. ExPASy TrEMBL
Match: A0A1S3BGT8 (glutaredoxin-C13-like OS=Cucumis melo OX=3656 GN=LOC103489689 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. NCBI nr
Match: XP_022958442.1 (glutaredoxin-C13-like [Cucurbita moschata] >XP_023533475.1 glutaredoxin-C13-like [Cucurbita pepo subsp. pepo] >KAG7035620.1 Glutaredoxin-C13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-51
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. NCBI nr
Match: KAG6605711.1 (Monothiol glutaredoxin-S9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211.8 bits (538), Expect = 2.8e-51
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTPPVPA+FIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPPVPAIFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. NCBI nr
Match: XP_022995212.1 (glutaredoxin-C13-like [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTP VPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPAVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. NCBI nr
Match: XP_004139878.1 (glutaredoxin-C13 [Cucumis sativus] >XP_008447177.1 PREDICTED: glutaredoxin-C13-like [Cucumis melo] >KAA0041900.1 Glutaredoxin [Cucumis melo var. makuwa] >TYK17834.1 Glutaredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 8.6e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. NCBI nr
Match: XP_038888335.1 (monothiol glutaredoxin-S11-like [Benincasa hispida])

HSP 1 Score: 188.7 bits (478), Expect = 2.5e-44
Identity = 91/105 (86.67%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V+RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVRRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
            C+TPPVPAVFIAG+LVGSTNEVMSLHLSG+LNRMLKP+KVVQEN
Sbjct: 61  VCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVVQEN 105

[Close]

BLAST of CmoCh02G010680.1 vs. TAIR 10
Match: AT2G47880.1 (Glutaredoxin family protein )

HSP 1 Score: 123.6 bits (309), Expect = 9.2e-29
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVV 103
           GC T  VPAVF+ G LVGSTNEVMSLHLSG L  ++KP++ +
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]

BLAST of CmoCh02G010680.1 vs. TAIR 10
Match: AT2G30540.1 (Thioredoxin superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28
Identity = 59/100 (59.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I SK+SCC+ YAV VL ++LGV P V+E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC T PVPA+F+ G L+GSTNEVMSLHLSG L  ++KPF+
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98

[Close]

BLAST of CmoCh02G010680.1 vs. TAIR 10
Match: AT3G62960.1 (Thioredoxin superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 6.0e-28
Identity = 58/100 (58.00%), Postives = 80/100 (80.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC    VPAVF++G LVGSTN+VMSLHLSG L  ++KP++
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQ 98

[Close]

BLAST of CmoCh02G010680.1 vs. TAIR 10
Match: AT1G06830.1 (Glutaredoxin family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-27
Identity = 57/99 (57.58%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCL YAV VL ++LGV+P ++E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPF 100
           GC + PVPAVFI G LVGSTNEVMS+HLS  L  ++KP+
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]

BLAST of CmoCh02G010680.1 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.8e-23
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 1  MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
          MERV+ LA+E   +I +K+SCC+C+++  L  ELG SP ++ELD+DP   DME+AL R+ 
Sbjct: 1  MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61 GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLK 98
          G + P VPAVF+ G  VGS  +V+S H+ G L +MLK
Sbjct: 61 GSN-PAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLK 96

The following BLAST results are available for this feature:

BLAST of CmoCh02G010680.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82255	1.3e-27	57.84	Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=1 SV=1	[more]
O04341	1.7e-27	59.00	Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana OX=3702 GN=GRXS9 PE=1 SV=1	[more]
Q9LYC5	8.4e-27	58.00	Glutaredoxin-C14 OS=Arabidopsis thaliana OX=3702 GN=GRXC14 PE=3 SV=1	[more]
Q9M9Y9	7.1e-26	57.58	Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana OX=3702 GN=GRXS11 PE=3 SV=1	[more]
Q7G8Y5	3.0e-24	59.79	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of CmoCh02G010680.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1U5	1.0e-51	100.00	glutaredoxin-C13-like OS=Cucurbita moschata OX=3662 GN=LOC111459664 PE=3 SV=1	[more]
A0A6J1JY66	8.7e-51	99.05	glutaredoxin-C13-like OS=Cucurbita maxima OX=3661 GN=LOC111490824 PE=3 SV=1	[more]
A0A5A7TF06	4.2e-45	86.67	Glutaredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00910 P...	[more]
A0A0A0K5I6	4.2e-45	86.67	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G23094...	[more]
A0A1S3BGT8	4.2e-45	86.67	glutaredoxin-C13-like OS=Cucumis melo OX=3656 GN=LOC103489689 PE=3 SV=1	[more]

BLAST of CmoCh02G010680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958442.1	2.1e-51	100.00	glutaredoxin-C13-like [Cucurbita moschata] >XP_023533475.1 glutaredoxin-C13-like...	[more]
KAG6605711.1	2.8e-51	99.05	Monothiol glutaredoxin-S9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022995212.1	1.8e-50	99.05	glutaredoxin-C13-like [Cucurbita maxima]	[more]
XP_004139878.1	8.6e-45	86.67	glutaredoxin-C13 [Cucumis sativus] >XP_008447177.1 PREDICTED: glutaredoxin-C13-l...	[more]
XP_038888335.1	2.5e-44	86.67	monothiol glutaredoxin-S11-like [Benincasa hispida]	[more]

BLAST of CmoCh02G010680.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47880.1	9.2e-29	57.84	Glutaredoxin family protein	[more]
AT2G30540.1	1.2e-28	59.00	Thioredoxin superfamily protein	[more]
AT3G62960.1	6.0e-28	58.00	Thioredoxin superfamily protein	[more]
AT1G06830.1	5.1e-27	57.58	Glutaredoxin family protein	[more]
AT2G47870.1	5.8e-23	50.52	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..77 e-value: 7.6E-10 score: 38.9
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 4..100 e-value: 1.3E-34 score: 116.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..104 e-value: 4.3E-24 score: 86.3
None	No IPR available	PANTHER	PTHR10168:SF224	MONOTHIOL GLUTAREDOXIN-S11	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..103 score: 19.519981
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 13..92 e-value: 1.0143E-28 score: 97.2251
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..99

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G010680	CmoCh02G010680	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G010680.1:exon:5408	CmoCh02G010680.1:exon:5408	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G010680.1:cds	CmoCh02G010680.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G010680.1	CmoCh02G010680.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0097573	glutathione oxidoreductase activity