CmoCh02G008950.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008950.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	double-stranded RNA-binding protein 2-like
Location	Cmo_Chr02: 5517118 .. 5520501 (+)
Sequence length	1738
RNA-Seq Expression	CmoCh02G008950.1
Synteny	CmoCh02G008950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGTCAAGCATTGATTAGTATATTCAAATTGAAAGTTTAAGTTTAATTATGAAGAGTGAACAGAAAATCTTTGAAAGAGATCACATCCCATGCAGCTGAAGGTTGACTCAGAGCAACATTAAATTCCCAATCCCCAACTTTTTATTCTGATGAAATATCGATCACCCACTTTCTTTTGCTTCAATTTTTGCTCCAATTTTTGTCTGGCCGATGAAATCCTTTGCATCGTCGGATTTCACTCTCCGGCGACCACTGCGGCGGTCCGATTTCCTCTTCCGCCTCCGGCTACCGTTCCTATAGGTGATTGGGGGATAGAAGGGGGCTGAAATCGGAGGCGAAATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGTCCTACTCTCCGGCTGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGTGCGTATTCTTACACTCATTGTGCCGATTAGTTTCCGCCGTTGTTGTTGTTGCGACTATTGTGTTTCACGATGTGTTTGATTTCGTTCTTGTTGTTCTTCTTGGTCTTTTATTTTAGTAGCTATTGCAAACTAGAGTAGGTCGCATTACTGTGTGCGAGTTCCATGTTTCCCTTCCTTGCCAGTCTTCAAACCTACGATCGCAGTTCAAAGTCTGATGCCAAAATTGGAGTTTCGATCTTATTCTTGAGTACGGTTTCAGGTGATCGCCTGAACGTTCCGGCTAGCGACCTCTATCGGTCGGGATGGAGTCGGCGATTAAGATAATCTGGTTCTTTCAGAATGCAAAAATTCACGAATAACCTTTCATTTTTCACCTCTTTTCCTCTAATGGCTCATCAAATTCCAAATCCAGTTGTTTTTTCTGACGAAGCCGACACCGTAGACTTTAAATTCAAGAAACAGAGGACATTTTAGGAAACTTATTGACGGAAGCCTTCAACATTGATTGATATCTGCGATTGTTTTGTCGTTATCAATATCATTAAGGGACCAGTTGCATACGTGATTTTCTATGGGGATGGTTGGCGATATTAAGTTTAGTTTTAACTTGTCCTAGTAGCTTTTCCCCTTGCACGCCCCTGAAAGCCTCTGTATTCCTAGTTTTTTTGACAATAACATGGCTGATTGAGCTGAATGCTGTGGCAATTTATGTATGATTGCAATTCTACAGAGTTTTTTTGCTTGTTTTTGTAATGTACATTTAGATATGAACTCAAATTGTCGATCTTCTTGCTCAACTCTGTATCTTAGTGATTAAGTAATATATGGTAATTGGCAGGACGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAGTTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACGTGAGTTTTGTTTCTGGATTTTTCGTCCCGATCATTTAAACCCATCTTAGAAGATCATGTAGCTAGCATAACCTTGGTGAATGTACTGTGGTTTAGCCCTAATGTTGCATATGCCACTTTCTGTGACACCTCTTATCCCCCCAGATTCAATATTTCTTAGCAGTCTTTAAGATTTTCAATCAACCCATTGCACATCTATGTCCTCGAGTTCTAAAGATACAATAATAAAGCCATTGTACTTGGATTTGGATATTATGTGAATCACGATTATTATTTGTGGAAGAAGACGTTGCCATGGATGTGCACTGATATATCAACTGTCGTTAAACATGTGGATAATGTAGTTTGTTTTTTCTGTCCAGTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGGGCGTTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCACCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCTTACAGCCTATGGGAGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTTGTCGAGGAATTGTACCACCTGTGACAATAAGAACTGCTGTGCCTGTTTATGCAGCACCGCCATTCACACAACCACCCAATGTACACCCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTGCTCCACCATTGTCCAGAAAGGAGTTTTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCCATAAACAAGATCCGTCAACCACTACCGTAGAGGGTTCTGCCAATACCTCGAAAGCTGATCATTCAGCTGCATCTGGCCCAGTCTTGCTCACGACAACTTCTAATCAAGTACCGGAAACTCAGAGCCCAAATGCAACCAGTTTGGATGAAACCAAAACTGTTCAGCATCTGAAACAACTCAAAATCCAATAGATTGTTAACTTCGTTGGATATATACCATAAGATGTGACAATCTCAGATCATCTAGTGTTGTTAGATTAATATTCTGTTTAAGCGTCGTATGTACCGTCTCGACAGTTTTGCCTTTGCCATATATGACCAATAGTTAGCCCCAAGGTAAACGAGAGGGCACAATTTCCTTGTAATCGGCTTTATCCAGTGGCAGTAATGTTAATTGTGAAGTCCTTCCCCTTTAGCTATTTACCAAAAAAAATTAAGTCATCTATTCATAAAATCTCAGTTCCCTTGGCATTGCAGGCTCACAAAGCTGAGGCAAGTGTTAGAACTGTCGAAAACGATTGGTGGGTTGAGCTCCAGATCTTACAGGTACTATTCCCTTACAATTTTGTAATGTTTTTGCATCACTTCTCCATCTTTCTGACTCTAATATTGGGTAGGAAGACACAGAACAAAAGGTCTTAATTCTTAAAGCTTATTAGAAGATACAAAATCATGAAATCAAATAGAATGGATGGTAAGATTAGATTGTCAGAAATAAGGTAAAGATTTGCATGCTCTTAGACGTATACTCTCGTAATGATCGAGAAACTATAA

mRNA sequence

TGAGTCAAGCATTGATTAGTATATTCAAATTGAAAGTTTAAGTTTAATTATGAAGAGTGAACAGAAAATCTTTGAAAGAGATCACATCCCATGCAGCTGAAGGTTGACTCAGAGCAACATTAAATTCCCAATCCCCAACTTTTTATTCTGATGAAATATCGATCACCCACTTTCTTTTGCTTCAATTTTTGCTCCAATTTTTGTCTGGCCGATGAAATCCTTTGCATCGTCGGATTTCACTCTCCGGCGACCACTGCGGCGGTCCGATTTCCTCTTCCGCCTCCGGCTACCGTTCCTATAGGTGATTGGGGGATAGAAGGGGGCTGAAATCGGAGGCGAAATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGTCCTACTCTCCGGCTGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGACGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAGTTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGGGCGTTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCACCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCTTACAGCCTATGGGAGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTTGTCGAGGAATTGTACCACCTGTGACAATAAGAACTGCTGTGCCTGTTTATGCAGCACCGCCATTCACACAACCACCCAATGTACACCCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTGCTCCACCATTGTCCAGAAAGGAGTTTTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCCATAAACAAGATCCGTCAACCACTACCGTAGAGGGTTCTGCCAATACCTCGAAAGCTGATCATTCAGCTGCATCTGGCCCAGTCTTGCTCACGACAACTTCTAATCAAATTAATATTCTGTTTAAGCGTCTGGCAGTAATGTTAATTGTGAAGTCCTTCCCCTTTAGCTATTTACCAAAAAAAATTAAGTCATCTATTCATAAAATCTCAGTTCCCTTGGCATTGCAGGCTCACAAAGCTGAGGCAAGTGTTAGAACTGTCGAAAACGATTGGTGGGTTGAGCTCCAGATCTTACAGACGTATACTCTCGTAATGATCGAGAAACTATAA

Coding sequence (CDS)

ATGTATAAAAATCAGCTTCAGGAATTGGCGCAGAGGAGTTGCTTTAATCTTCCTTCTTATTCGTCGGTTAGGGAAGGGCCTGATCATGCTCCGAGGTTCAAAGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGTCCTACTCTCCGGCTGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCGAATCGCGGTCCATCTCACTCGCTTGCCGCTCGGATCCTGGACGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAGAGAGTTGGGGCTCCATTGCCACAGTATACAACAGTCCGGTCAGGACTTGGACATCTGCCTGTTTTTACAGGGTCTATAGAGTTGGCTGGAATCACGTTCACTGGGGAACCTGCCAAGAACAAGAAACAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCGTCTTTAAAACAACTGGCAAAAGAAGCGGCCAGTTCATCGGAAGTTGAAAGCAGTGACGAGCCAGAGCAGGTTATGATAGCTCGGGCGTTATTGAACTATCGTTTAAAGGAGAAGATGTTCAAGACTAACCCAAATGTCCCAATGCCATTCCCAAAGAAGCTTTCATTTCAAAGTCCAAGGGCAACTAGTCCGCAACCACCCCCCGCTACCACATCCAAAATTCTACCTTTCATTTGCAAAAAGCCAATTTCTCGAAGCAGACTACCACCAACAGAATACAACAGCCCTACATTACCATCACATCCTCTTACAGCCTATGGGAGTCATCCTCAAAAGTTCCCTGCACCTGGAGCAGTTCCTTATGTCCCGATTCGACAATATAGGATGCCTTGTCGAGGAATTGTACCACCTGTGACAATAAGAACTGCTGTGCCTGTTTATGCAGCACCGCCATTCACACAACCACCCAATGTACACCCCCAGGTGCGAACTTCCCAACACATTCGAATTGCCCCCCCTGTCTCAGTTAGACAAGCTATTCCAGTTTTTGCTGCTGCTCCACCATTGTCCAGAAAGGAGTTTTCAGCTCTTCACAAAGGAGATTCCCTCACTGTCCATAAACAAGATCCGTCAACCACTACCGTAGAGGGTTCTGCCAATACCTCGAAAGCTGATCATTCAGCTGCATCTGGCCCAGTCTTGCTCACGACAACTTCTAATCAAATTAATATTCTGTTTAAGCGTCTGGCAGTAATGTTAATTGTGAAGTCCTTCCCCTTTAGCTATTTACCAAAAAAAATTAAGTCATCTATTCATAAAATCTCAGTTCCCTTGGCATTGCAGGCTCACAAAGCTGAGGCAAGTGTTAGAACTGTCGAAAACGATTGGTGGGTTGAGCTCCAGATCTTACAGACGTATACTCTCGTAATGATCGAGAAACTATAA

Protein sequence

MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSAAEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFTGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLPPTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAAPPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQDPSTTTVEGSANTSKADHSAASGPVLLTTTSNQINILFKRLAVMLIVKSFPFSYLPKKIKSSIHKISVPLALQAHKAEASVRTVENDWWVELQILQTYTLVMIEKL

Homology

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BLAST of CmoCh02G008950.1 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.2e-118
Identity = 236/357 (66.11%), Postives = 275/357 (77.03%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEVESSDEPEQVMIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ DE EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLKEKM-FKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           AL+NYR+KE +   ++ + P+PF KK   Q+ R TSPQP PATTS+ILPFIC K  SRS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 LPPTEYNSP----TLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTA 300
                  S        +    +Y    Q+F  P   PYVP+RQ+R  C G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPP-----------NVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPL 341
           VPV++APP   PP            V   +RT+  +RIAPPV++R A+PVFA+APP+
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPV 354

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BLAST of CmoCh02G008950.1 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 9.9e-104
Identity = 215/342 (62.87%), Postives = 251/342 (73.39%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLP+Y+ +REGPDHAPRFKA+VNFNGE FESP    TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL +LA RGPS+SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK-EAASSSEVESSDEPEQVMIAR 180
            ++ELAGITFTG+PAKNKKQAEKNAA AAWSSL+QL + EA+SS+E ES+DE EQ+ IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATS-PQPPPATTSKILPFICKKPISRSR 240
           ALLNYRLKEKM   N     PFPKK   Q  R T+ PQ   ++ SKILP    K  SRSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 --LPPTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVP 300
              P     +   P  P T   +   +FPA  A PYVP+  +RMPC  + PPVT+RT++P
Sbjct: 241 PESPAASDAASQTPFRP-TESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSIP 300

Query: 301 VYAAPPFTQP----PNVHPQVRTSQHIRIAPPVSVRQAIPVF 335
           V++APP   P      + P +     IR+A PV +R A P+F
Sbjct: 301 VFSAPPLPPPGARTQQLPPLMSHPPPIRMASPVRIRPAPPLF 341

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BLAST of CmoCh02G008950.1 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-66
Identity = 140/228 (61.40%), Postives = 166/228 (72.81%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP  C TLRLAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+ RGPS SLAA++LDETG+YKNLLQE A R G  LP YTT+RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK--EAASSS--EVESSDEPEQVM 180
            ++ELAG+TFTG P K KKQA+KNAA+AAWS LKQL +  E +SSS       D+ EQ++
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRLKEKMFKTN-PNVPMPFPKKLSFQSPRATSPQPPPATTS 224
           +AR L +      + +TN    P    K+ S   P +  P  P +  S
Sbjct: 181 VARTLAS------LNQTNGGKTPQQKEKQQSSNRPSSRRPSYPKSNAS 222

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BLAST of CmoCh02G008950.1 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.7e-66
Identity = 159/345 (46.09%), Postives = 211/345 (61.16%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLA--------KEAASSSEVESSDEP 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK+++        KE  + + V S  +P
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQDEEKEQEAVARVLSRFKP 180

Query: 181 EQVMIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATS------------------ 240
           ++V        +R +     +N ++ +   + ++  + +A+S                  
Sbjct: 181 KEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHKNSSFISL 240

Query: 241 -PQPPPATTSKILPFICKKPISRSRLPPTEYNSPTLPSHPLTAYGSH--PQKFPAPGAVP 300
            P PPP  +SKILPFI +     S+   TE  +  + S       S    ++ P      
Sbjct: 241 IPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQMPFSDMNR 300

Query: 301 YVPIRQYRMPCRGIVPPVTIRTAVPVYAAPPFTQPPNVHPQVRTS 317
           Y  +    +    + P V +R+ +PV+AAPP    PN++P   +S
Sbjct: 301 YNFVGGCSVNPYSLAPAVQMRSVIPVFAAPPPKPNPNLNPSSLSS 345

[Close]

BLAST of CmoCh02G008950.1 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-61
Identity = 153/347 (44.09%), Postives = 209/347 (60.23%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           L  +R KE        V    P +   ++   T  Q    TT+     +C+K +    L 
Sbjct: 181 LSRFRPKE--------VKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEK-LRSINLY 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGI---VPPVTIRTAVPV 300
             E +S + P        ++  +  +         ++Y    + +    P + I+T+ P 
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 YAAPPFTQPPNVHPQVR-----TSQHIRIAPPVSVRQAIPVFAAAPP 340
             +    +  N + ++         H ++AP V +R  IPV +A PP
Sbjct: 301 PLSSSVER--NCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]

BLAST of CmoCh02G008950.1 vs. ExPASy TrEMBL
Match: A0A6J1H5X1 (double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111459856 PE=4 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 3.7e-218
Identity = 392/393 (99.75%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD
Sbjct: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTTTVEGSANTSKADHSAASGPVLLTTTSNQ+
Sbjct: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. ExPASy TrEMBL
Match: A0A6J1K0V3 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111491377 PE=4 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.6e-208
Identity = 380/393 (96.69%), Postives = 381/393 (96.95%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHP TAYG HPQKFPAPGAVPYVPIRQYRMP RGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPFTQPP VH QVRTSQHIRIAPPVSVRQAIPVFAA PPLSRKE SALHKGDSLTV KQD
Sbjct: 301 PPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTVDKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTT VEGSANTSKADHSAAS PVLLT TS Q+
Sbjct: 361 PSTTAVEGSANTSKADHSAASDPVLLTRTSIQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. ExPASy TrEMBL
Match: A0A6J1CIU4 (double-stranded RNA-binding protein 2 OS=Momordica charantia OX=3673 GN=LOC111011373 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 5.9e-184
Identity = 342/395 (86.58%), Postives = 355/395 (89.87%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ESSD+PEQV+IARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICKKP+ RSRLP
Sbjct: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTE NSP LPS P TA GSHPQKFPAPGAVPYVPIR YRMPCRGIVPPVTIRTAVPVY+A
Sbjct: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYSA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPF QPP V  Q+R +  IR+APPV +RQAIPVFA  PP +RKE  ALHKGDSLTV K+D
Sbjct: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360

Query: 361 PSTTTVEGSANTSKA-DHSA--ASGPVLLTTTSNQ 393
           P T   E SA+T KA DHSA  AS PV L  +SNQ
Sbjct: 361 PPTIATEDSADTLKASDHSATSASAPVSLAASSNQ 395

[Close]

BLAST of CmoCh02G008950.1 vs. ExPASy TrEMBL
Match: A0A6J1FYW0 (double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111449096 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.5e-179
Identity = 336/393 (85.50%), Postives = 350/393 (89.06%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGE+FESPNHCPTLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEVFESPNHCPTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AE+ALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEIALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITF GEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS VESSDEPEQVMIARA
Sbjct: 121 GSIELAGITFIGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSAVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           L NY LKEK F+TN N PMPFPKKLS Q+PRATS QPPPATTSKILPFIC+KP+ RSRLP
Sbjct: 181 LSNYCLKEKTFRTNSNAPMPFPKKLSLQTPRATSQQPPPATTSKILPFICQKPVPRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PT+ NS TLPSHPLTA GSHPQKFPAPGAVPYVPI+QY MPCRGIV PVTIRTAVPVY+A
Sbjct: 241 PTKNNSTTLPSHPLTACGSHPQKFPAPGAVPYVPIQQYSMPCRGIVLPVTIRTAVPVYSA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
            P  QP  V  Q+R SQ IRIAPPVS+RQAIPVFAA PPLSRKE SAL KGDS TV KQD
Sbjct: 301 SPCPQPLKVPSQMRPSQPIRIAPPVSIRQAIPVFAAPPPLSRKELSALPKGDSPTVPKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           P T   E SA++  ADHS AS PV LT   NQ+
Sbjct: 361 PPTIATEDSADSLIADHSVASTPVSLTVPPNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. ExPASy TrEMBL
Match: A0A6J1J8R1 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483627 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 1.3e-178
Identity = 334/393 (84.99%), Postives = 349/393 (88.80%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGE+FESPNHCPTLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEVFESPNHCPTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AE+ALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEIALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGI F GEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS VESSDEPEQVMIARA
Sbjct: 121 GSIELAGIPFIGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSAVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           L NY LKEK F+TN N PMPFPKKLSFQ+PRATS  PPPATTSKILPFIC+KP+ RSRLP
Sbjct: 181 LSNYCLKEKTFRTNSNGPMPFPKKLSFQTPRATSQHPPPATTSKILPFICQKPVPRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PT+ NS TLPSHPLTA GSHPQKFPAPGAVPYVPI+QYRMPCRGIV PVTIRTAVPVY+A
Sbjct: 241 PTKNNSTTLPSHPLTACGSHPQKFPAPGAVPYVPIQQYRMPCRGIVLPVTIRTAVPVYSA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
            P  QP     Q+R SQ IRIAPPVS+RQAIPVFAA PPLSRKE SAL KG+S TV KQD
Sbjct: 301 SPCPQPLKAPSQIRPSQPIRIAPPVSIRQAIPVFAAPPPLSRKELSALPKGESPTVPKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           P T   E SA++  ADHS AS PV LT   NQ+
Sbjct: 361 PPTIATEDSADSLIADHSVASTPVSLTVPPNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. NCBI nr
Match: XP_022958714.1 (double-stranded RNA-binding protein 2-like [Cucurbita moschata])

HSP 1 Score: 767.3 bits (1980), Expect = 7.5e-218
Identity = 392/393 (99.75%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD
Sbjct: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTTTVEGSANTSKADHSAASGPVLLTTTSNQ+
Sbjct: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. NCBI nr
Match: KAG7035466.1 (Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 760.8 bits (1963), Expect = 7.1e-216
Identity = 389/393 (98.98%), Postives = 390/393 (99.24%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPFTQPPN H QVRTSQHIRIAPPVSVRQAIPVFAA PPLSRKEFSALHKGDSLTVHKQD
Sbjct: 301 PPFTQPPNAHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTTTVEGSANTSKADHSAASGPVLLTTTSNQ+
Sbjct: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. NCBI nr
Match: KAG6605550.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 759.2 bits (1959), Expect = 2.1e-215
Identity = 388/393 (98.73%), Postives = 389/393 (98.98%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIAR 
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARV 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPFTQPPN H QVRTSQHIRIAPPVSVRQAIPVFAA PPLSRKEFSALHKGDSLTVHKQD
Sbjct: 301 PPFTQPPNAHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTTTVEGSANTSKADHSAASGPVLLTTTSNQ+
Sbjct: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. NCBI nr
Match: XP_023534429.1 (double-stranded RNA-binding protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 756.5 bits (1952), Expect = 1.3e-214
Identity = 386/393 (98.22%), Postives = 389/393 (98.98%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVES+DEPEQVMIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESNDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICK+PISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKRPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPF QPPNVH QVRTSQHIRI PPVSVRQAIPVFAA PPLSRKEFSALHKGDSLTVHKQD
Sbjct: 301 PPFAQPPNVHSQVRTSQHIRIVPPVSVRQAIPVFAAPPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTTTVEGSANTSKADHSAASGPVLLTTTSNQ+
Sbjct: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. NCBI nr
Match: XP_022996057.1 (double-stranded RNA-binding protein 2-like [Cucurbita maxima])

HSP 1 Score: 734.6 bits (1895), Expect = 5.4e-208
Identity = 380/393 (96.69%), Postives = 381/393 (96.95%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300
           PTEYNSPTLPSHP TAYG HPQKFPAPGAVPYVPIRQYRMP RGIVPPVTIRTAVPVYAA
Sbjct: 241 PTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360
           PPFTQPP VH QVRTSQHIRIAPPVSVRQAIPVFAA PPLSRKE SALHKGDSLTV KQD
Sbjct: 301 PPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTVDKQD 360

Query: 361 PSTTTVEGSANTSKADHSAASGPVLLTTTSNQI 394
           PSTT VEGSANTSKADHSAAS PVLLT TS Q+
Sbjct: 361 PSTTAVEGSANTSKADHSAASDPVLLTRTSIQV 393

[Close]

BLAST of CmoCh02G008950.1 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 426.8 bits (1096), Expect = 2.3e-119
Identity = 236/357 (66.11%), Postives = 275/357 (77.03%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEVESSDEPEQVMIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ DE EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLKEKM-FKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSR 240
           AL+NYR+KE +   ++ + P+PF KK   Q+ R TSPQP PATTS+ILPFIC K  SRS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 LPPTEYNSP----TLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTA 300
                  S        +    +Y    Q+F  P   PYVP+RQ+R  C G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYAAPPFTQPP-----------NVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPL 341
           VPV++APP   PP            V   +RT+  +RIAPPV++R A+PVFA+APP+
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPV 354

[Close]

BLAST of CmoCh02G008950.1 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 253.8 bits (647), Expect = 2.6e-67
Identity = 159/345 (46.09%), Postives = 211/345 (61.16%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLA--------KEAASSSEVESSDEP 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK+++        KE  + + V S  +P
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQDEEKEQEAVARVLSRFKP 180

Query: 181 EQVMIARALLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATS------------------ 240
           ++V        +R +     +N ++ +   + ++  + +A+S                  
Sbjct: 181 KEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHKNSSFISL 240

Query: 241 -PQPPPATTSKILPFICKKPISRSRLPPTEYNSPTLPSHPLTAYGSH--PQKFPAPGAVP 300
            P PPP  +SKILPFI +     S+   TE  +  + S       S    ++ P      
Sbjct: 241 IPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQMPFSDMNR 300

Query: 301 YVPIRQYRMPCRGIVPPVTIRTAVPVYAAPPFTQPPNVHPQVRTS 317
           Y  +    +    + P V +R+ +PV+AAPP    PN++P   +S
Sbjct: 301 YNFVGGCSVNPYSLAPAVQMRSVIPVFAAPPPKPNPNLNPSSLSS 345

[Close]

BLAST of CmoCh02G008950.1 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-62
Identity = 153/347 (44.09%), Postives = 209/347 (60.23%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           L  +R KE        V    P +   ++   T  Q    TT+     +C+K +    L 
Sbjct: 181 LSRFRPKE--------VKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEK-LRSINLY 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGI---VPPVTIRTAVPV 300
             E +S + P        ++  +  +         ++Y    + +    P + I+T+ P 
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 YAAPPFTQPPNVHPQVR-----TSQHIRIAPPVSVRQAIPVFAAAPP 340
             +    +  N + ++         H ++AP V +R  IPV +A PP
Sbjct: 301 PLSSSVER--NCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]

BLAST of CmoCh02G008950.1 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-62
Identity = 153/347 (44.09%), Postives = 209/347 (60.23%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    +E EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240
           L  +R KE        V    P +   ++   T  Q    TT+     +C+K +    L 
Sbjct: 181 LSRFRPKE--------VKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEK-LRSINLY 240

Query: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGI---VPPVTIRTAVPV 300
             E +S + P        ++  +  +         ++Y    + +    P + I+T+ P 
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 YAAPPFTQPPNVHPQVR-----TSQHIRIAPPVSVRQAIPVFAAAPP 340
             +    +  N + ++         H ++AP V +R  IPV +A PP
Sbjct: 301 PLSSSVER--NCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]

BLAST of CmoCh02G008950.1 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-30
Identity = 73/154 (47.40%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60
           +YK QLQ  A +    LP Y++ REGP HAPRF+ +V F G+ F+S    PTL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           A++A+ SL  + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLK 155
            ++E AG  F+GE AK KK AE +AA  A+ S+K
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIK 149

The following BLAST results are available for this feature:

BLAST of CmoCh02G008950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	3.2e-118	66.11	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	9.9e-104	62.87	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	1.3e-66	61.40	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8GY79	3.7e-66	46.09	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]
Q9LJF5	2.1e-61	44.09	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]

BLAST of CmoCh02G008950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5X1	3.7e-218	99.75	double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K0V3	2.6e-208	96.69	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1CIU4	5.9e-184	86.58	double-stranded RNA-binding protein 2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1FYW0	1.5e-179	85.50	double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J8R1	1.3e-178	84.99	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CmoCh02G008950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958714.1	7.5e-218	99.75	double-stranded RNA-binding protein 2-like [Cucurbita moschata]	[more]
KAG7035466.1	7.1e-216	98.98	Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6605550.1	2.1e-215	98.73	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023534429.1	1.3e-214	98.22	double-stranded RNA-binding protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996057.1	5.4e-208	96.69	double-stranded RNA-binding protein 2-like [Cucurbita maxima]	[more]

BLAST of CmoCh02G008950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	2.3e-119	66.11	dsRNA-binding protein 2	[more]
AT5G41070.1	2.6e-67	46.09	dsRNA-binding protein 5	[more]
AT3G26932.1	1.5e-62	44.09	dsRNA-binding protein 3	[more]
AT3G26932.2	1.5e-62	44.09	dsRNA-binding protein 3	[more]
AT3G62800.1	1.5e-30	47.40	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 2.7E-17 score: 73.4 coord: 88..154 e-value: 5.8E-19 score: 79.0
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 2..68 e-value: 1.1E-13 score: 51.7 coord: 88..153 e-value: 1.1E-11 score: 45.3
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 87..155 score: 11.479855
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 12.280972
None	No IPR available	GENE3D	3.30.160.20		coord: 84..155 e-value: 1.1E-20 score: 75.7
None	No IPR available	GENE3D	3.30.160.20		coord: 2..83 e-value: 1.9E-21 score: 78.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..379
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..347
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..347
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..68
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 88..157
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 86..154 e-value: 1.20449E-37 score: 129.906
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 1.68623E-40 score: 137.607

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G008950	CmoCh02G008950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G008950.1:exon:4452	CmoCh02G008950.1:exon:4452	exon
CmoCh02G008950.1:exon:4453	CmoCh02G008950.1:exon:4453	exon
CmoCh02G008950.1:exon:4454	CmoCh02G008950.1:exon:4454	exon
CmoCh02G008950.1:exon:4455	CmoCh02G008950.1:exon:4455	exon
CmoCh02G008950.1:exon:4456	CmoCh02G008950.1:exon:4456	exon
CmoCh02G008950.1:exon:4457	CmoCh02G008950.1:exon:4457	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G008950.1:five_prime_utr	CmoCh02G008950.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G008950.1:cds	CmoCh02G008950.1:cds	CDS
CmoCh02G008950.1:cds	CmoCh02G008950.1:cds_2	CDS
CmoCh02G008950.1:cds	CmoCh02G008950.1:cds_3	CDS
CmoCh02G008950.1:cds	CmoCh02G008950.1:cds_4	CDS
CmoCh02G008950.1:cds	CmoCh02G008950.1:cds_5	CDS
CmoCh02G008950.1:cds	CmoCh02G008950.1:cds_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G008950.1	CmoCh02G008950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding