CmoCh02G003410.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G003410.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR21-like
Location	Cmo_Chr02: 1739122 .. 1739415 (+)
Sequence length	294
RNA-Seq Expression	CmoCh02G003410.1
Synteny	CmoCh02G003410.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAACAAGCTGTTAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAGCAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTGACATCCAGGCTGCAATCTTGCTGA

mRNA sequence

ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAACAAGCTGTTAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAGCAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTGACATCCAGGCTGCAATCTTGCTGA

Coding sequence (CDS)

ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAACAAGCTGTTAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAGCAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTGACATCCAGGCTGCAATCTTGCTGA

Protein sequence

MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC

Homology

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-24
Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   TAS+      PKG +AVYVG+ ++KR++VP++YL+ PSF ALLS +EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-24
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YLN PSF ALLS +E+E
Sbjct: 7  LLGAKKILSRSTAAV---SAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-24
Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   T +       PKG +AVYVG+ ++KR++VP++YLN PSF ALLS +EEE
Sbjct: 7  LLGAKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-24
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YL+ PSF ALLS +EEE
Sbjct: 7  LLGAKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-24
Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   T ++      PKG +AVYVG+ ++KR++VPI+YLN PSF ALLS +EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSR Q
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy TrEMBL
Match: A0A0A0LM71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.6e-44
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 96
          LL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy TrEMBL
Match: A0A5D3BMR1 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001790 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 96
          LL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy TrEMBL
Match: A0A1S3C787 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497285 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 96
          LL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy TrEMBL
Match: A0A6J1JGW3 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAKQ VKM T  SRN+CGVPKGHIAVYVGDIERKRFVVPI+YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVVKMQTVPSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS 97
          LL +AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ+
Sbjct: 61 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 96

[Close]

BLAST of CmoCh02G003410.1 vs. ExPASy TrEMBL
Match: A0A6J1FVH4 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448819 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.1e-43
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
           MGIRLPSLLLNAKQ VKM T SSRN+CGVPKGHIAVYVGD ERKRFVVPI+YLNHPSFSA
Sbjct: 40  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSA 99

Query: 61  LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS 97
           LL +AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ+
Sbjct: 100 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 135

[Close]

BLAST of CmoCh02G003410.1 vs. NCBI nr
Match: KAG6605018.1 (Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.4 bits (511), Expect = 3.4e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 98
          LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Sbjct: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 97

[Close]

BLAST of CmoCh02G003410.1 vs. NCBI nr
Match: XP_023533163.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47
Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 98
          LL+ AEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Sbjct: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 97

[Close]

BLAST of CmoCh02G003410.1 vs. NCBI nr
Match: XP_023533287.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.2 bits (500), Expect = 6.5e-47
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD+ERKRFVVPIAYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDMERKRFVVPIAYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 98
          LL+ AEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Sbjct: 61 LLNRAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 97

[Close]

BLAST of CmoCh02G003410.1 vs. NCBI nr
Match: KAG6605022.1 (Auxin-responsive protein SAUR22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAK+AVKMHTASS NRCGVPKGHIAVYVGD+ERKRFVVPIAYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKRAVKMHTASSSNRCGVPKGHIAVYVGDVERKRFVVPIAYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 98
          LL+SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Sbjct: 61 LLNSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC 97

[Close]

BLAST of CmoCh02G003410.1 vs. NCBI nr
Match: KAG6605027.1 (Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60

Query: 61 LLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS 97
          LL+ AEEEF FKHPTGGLTIPCREDVFINLTSRLQS
Sbjct: 61 LLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS 96

[Close]

BLAST of CmoCh02G003410.1 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIERKRFVVPIA 60
           MG+   ++    KQ +K+++ ++RNR        VPKGH+AVYVG   ++E+KRFVVPI+
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINL-TSRLQ 96
           +LNHPSF   LS AEEEFGF HP GGLTIPCRE+VF++L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003410.1 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 5.2e-26
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IERKRFVVPIAYLNHPSFS 60
          M IR+  +L ++KQ +K  + SS N   +PKGH+AVYVG+ ++++RFVVP+ YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSS-NNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS 97
           LL  AEEEFGF HP GGLTIPC E +FI+L SRL +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLST 96

[Close]

BLAST of CmoCh02G003410.1 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQAVK----MHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHP 60
          M IR+P +L ++KQ ++    + ++SS +   VPKG++AVYVG+   KRFVVP++YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSR 94
          SF  LL  AEEEFGF HP GGLTIPC E++FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003410.1 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   TAS+      PKG +AVYVG+ ++KR++VP++YL+ PSF ALLS +EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003410.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25
Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEE 68
          LL AK+ +   T +       PKG +AVYVG+ ++KR++VP++YLN PSF ALLS +EEE
Sbjct: 7  LLGAKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of CmoCh02G003410.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	2.8e-24	60.92	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJF7	3.6e-24	59.77	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FK62	3.6e-24	59.77	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG1	6.2e-24	59.77	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJG0	6.2e-24	59.77	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]

BLAST of CmoCh02G003410.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71	5.6e-44	92.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1	[more]
A0A5D3BMR1	1.6e-43	91.58	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C787	1.6e-43	91.58	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497285 PE=...	[more]
A0A6J1JGW3	4.7e-43	90.63	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395...	[more]
A0A6J1FVH4	6.1e-43	90.63	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of CmoCh02G003410.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605018.1	3.4e-48	100.00	Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023533163.1	2.9e-47	97.94	auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]	[more]
XP_023533287.1	6.5e-47	96.91	auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605022.1	1.4e-46	95.88	Auxin-responsive protein SAUR22, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6605027.1	2.7e-45	96.88	Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh02G003410.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34810.1	2.3e-26	56.19	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	5.2e-26	55.67	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.5e-25	54.64	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	2.0e-25	60.92	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.6e-25	59.77	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 2.7E-26 score: 91.6
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..96
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 1..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G003410	CmoCh02G003410	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003410.1:exon:3238	CmoCh02G003410.1:exon:3238	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003410.1:cds	CmoCh02G003410.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003410.1	CmoCh02G003410.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin