CmoCh01G015860.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G015860.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 12186326 .. 12189525 (+)
Sequence length276
RNA-Seq ExpressionCmoCh01G015860.1
SyntenyCmoCh01G015860.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCTCCTCATTGGCCATCCATGCTCCATGAGCCTCCTCATTGGCCATCCATGCTCCTCCGACGGGGCTGGATCAGTATGAGACATATTAATAGAGGTCCGAACGTGTTCGTTTGAGACATTAACTGGGTTGGATCAGTTTGAGACATATTAACGGGATATAGTTGGATTGAATTGGTCTGGTTTTTTTTTTTTTTTTTTTAATTTATCTATTTTGTTAATATTTTATAATATTCACAAATTTATTGAATAATTTGGTAAATTTATGTTTTTTAATGTTAAATATGTGAACCAAATTAAAAATTTAGTAATAAAATGAAAGGAATATAGACGTGGCAAAGAGGGCTCCCACCCAATTCCGGAATGCACAATTCTCCCAAACACTTATCCAAAAACAAAAATCTTTATTTATTTATTTATTTATTTTAATTATTAGTATATTTACTTATTGTACACGTCAATATTTTTTCGACCTCCATGTCGACAAGTGACTTACTAAACATAGACACATCACTCCTCGCGTCAGTTCAAATCAGGACTGTCGAAATTGAATTCCCTTGACCAGGTTTTAGACGACGCATCATTCCCTACGCGTCAGTTTAAATCAGGACCGTCTAAATGGAATCTCCTTGATCAGGTCTTGGACGACGCATCATTTCCTACGCGTCAGTTTAAATCAGGACCGTCAAAATCGAATCCCTTTGACCAGGTCTTGGGCTTCTGGAATCATACACGCTTCGAAATCACCGACAATTTCGAATTTTAAAAAAAAAATAGAAAAGAAAAAGGAAATTACAACTGTAATCCATTTTACTTGGTCACTTCTCTCTCTTTCTCTCAGCCGCCGTCGGATTAAATCTTGGCTGATTGTGCATAGATTCCCTCTCTTTGGCCAAAGCTATTTTTGTTTTTCTTGTTTCCTATTAATTATTTTTATTTTATTCTCTCAATATTATTTGATAAAACAAAATTTCTATGTCTAATAAATACGTAATGTATTTATTTTTTAATAAATATTTATACACGTATCAAAAAAATAAACGAAAATAATTAATTTTAAAAAAGGTTGAATTAAAAGTTGAAGGAATTAACACTTATAAACATTAAATTAAAAATTTATAGGCTTAATTAATATATTTTTTAAAAAAAAAAATTAACCCTCGAATGACCCCTTATAAATTTCATTAGTGGGTGATTTCATTTTTTTTATTTTCAATTACAGAAATAAAATAAAAAAATATAAACAAAACAAAAAAAAGATAATATACATGTATTTATATAAAATATTTTTGAAATTCTTATTTTAAAATATAAACTTTTGTTTAATAAAGAAAAACAATTGTACTATTTATCCTTCAGAAAATAAAATAAAATAAAATAAATAAAAAATTTTATGAAAAATTATATTATTTTTATAATTTTAAAAATTGTATTAAATCATGTATGGCAGGAAAAATACAGCTAAAAAGGTATAAAAGAAATTTTTTTTATTTTTTATTTTTTTTATTTTAAAGGGTAAGAGTGAAAGTGCACTATTCATGGGTAGAAGCCTACTTTTACGTACAAACTATTTACGATAGCGACACCCTAAACTCCACAGAGTCGTTTTCATTCATTGAGAAGCGCGAGTTGGGAAGCCTCTGGAAACCACGCCCTCGCAGTTGCTATAAATACTGCTTCGATTTGAATTGCACCACATACCTTCCGATTCTCGTATTTCTCGTGTATTTCTCATCTCAGTCTCGATTCTAGCGAGTTTCTGACTGTGTTGGGTCTCTTTTGTTGCTGTTTTTGGGATTCAGGTGGCCGCCGCAAGCTTTTGTATTTGCTGATTGAAGGAAGTTCGTTTTTCTATTAAGAAAGTTTTTTGTAGTTCATATTGTTTGTTTTCTGATCATCTTTTTGTGGTACGGTTGGATCGTAGTTTGATTATGTTGTGTTTTGTTAGGCAATGTGATTTGCATGTGCCTTTGGATTGATTTTTTTTTGTTTGGATGCTTTGATGATTTTGGTTCGAAAAATGAATGTGATTTGGGATCTTATATCTCCTGGTTCTCGTTTCATCTGCAACTACAATCGTGGAGGTATATGGTCCCAAATTTTTTATGATTTTTTTTCATTCCCTTTCGATTAAAGAAGTTGAAATTCTTGTTGCATGTTTTCTTTTCGATGCGTACTGGGTCTGAGAAATGTTCGTTCCATAGGCTTATCTTAGATTTCTTTTGCAGTCATACTAGATATTGTTTTAGTTGTTTGATTTGATTATGTACCGTGATTTGGTGAAATTTTTAAATCTCTTTAATACATTTTGATTGTATTGAAATGCTTGTAGGTTAGGATTTGGTTTTTAGAAATTAGGAGCCAGATGTCGGTTGAAGTTCCCCTTACCTTATGCAGTAGAGAAGGCTTTGTCCTCTGTTTTCAAAAGGGTAGAACAGAGTAATGCAAATTAATGAATGTTATATCCTTGGCCTCTATTTGTCTTCTATTTTAAGGGTGGTGTTGGATGTTGGATTCTTGTCGGCAGCCTTGTCGGCAGCCCTTACTAAATCTTGATGTTGGAGTATGGGCAGAATCTTTGGAGTTCTTTGCTTCTTCAACATGTTTCAGATGAAATCTTCTGATGATTTCCAGACCATCAGCGTAACGGCCCAGATTCATGGCTAGTAGATATTGTCTTTTTGGGCTTTCCCTTTTGAGCTTCCCCTCAAGATTTTAAAATGCGTTTGCGAGGGGAAGGTTCCACACCCTTATAAATTGTGGTGTATTCTCGTCCCCTACCAATATGGGACATCACGCTGTGCATGTGCATGTAGTTGTGCAACAAATCAAGTGATCATGATGTGCAATTGGTCACAATATTCAAAGCTGGAGGCTCTGGAGTTCCCCCAGTGCTGCGTTGTAGTGTGTGTTATTATATGGGTTTCTTATAACCCTTTCTTTTTTGGATGAACTGAATTCCTCTCATGGAGGAGTTATGATGATTGGAGCTGTACAACATTTATTGGATTCTTTGTTGCTGATGTGCTGTGGTGTGCTGCTGTATACAAGAAACCAACAATGTCATGGCCTGTTTGACGGGTGATTAACATGCCTTTTCTGCCTTCAGAACCATTGCTAATGTCCTTCCTACATGCAGGTGCTGCTCTAAGTTACTATCCAGATTCAACCATTGTCCATGGCAGAGCTCGCAGCTGA

mRNA sequence

ATGAGCCTCCTCATTGGCCATCCATGCTCCATGAGCCTCCTCATTGGCCATCCATGCTCCTCCGACGGGGCTGGATCAGTTTTAGACGACGCATCATTCCCTACGCGTCAGTTTAAATCAGGACCGTCTAAATGGAATCTCCTTGATCAGGTCTTGGACGACGCATCATTTCCTACGCGTGGCCGCCGCAAGCTTTTGTATTTGCTGATTGAAGGAAGTGCTGCTCTAAGTTACTATCCAGATTCAACCATTGTCCATGGCAGAGCTCGCAGCTGA

Coding sequence (CDS)

ATGAGCCTCCTCATTGGCCATCCATGCTCCATGAGCCTCCTCATTGGCCATCCATGCTCCTCCGACGGGGCTGGATCAGTTTTAGACGACGCATCATTCCCTACGCGTCAGTTTAAATCAGGACCGTCTAAATGGAATCTCCTTGATCAGGTCTTGGACGACGCATCATTTCCTACGCGTGGCCGCCGCAAGCTTTTGTATTTGCTGATTGAAGGAAGTGCTGCTCTAAGTTACTATCCAGATTCAACCATTGTCCATGGCAGAGCTCGCAGCTGA

Protein sequence

MSLLIGHPCSMSLLIGHPCSSDGAGSVLDDASFPTRQFKSGPSKWNLLDQVLDDASFPTRGRRKLLYLLIEGSAALSYYPDSTIVHGRARS
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh01G015860.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G015860.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G015860.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G015860.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh01G015860CmoCh01G015860gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G015860.1:exon:3209CmoCh01G015860.1:exon:3209exon
CmoCh01G015860.1:exon:3210CmoCh01G015860.1:exon:3210exon
CmoCh01G015860.1:exon:3211CmoCh01G015860.1:exon:3211exon
CmoCh01G015860.1:exon:3212CmoCh01G015860.1:exon:3212exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G015860.1:cdsCmoCh01G015860.1:cdsCDS
CmoCh01G015860.1:cdsCmoCh01G015860.1:cds_2CDS
CmoCh01G015860.1:cdsCmoCh01G015860.1:cds_3CDS
CmoCh01G015860.1:cdsCmoCh01G015860.1:cds_4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh01G015860.1CmoCh01G015860.1-proteinpolypeptide