CmoCh01G002210.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G002210.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 971586 .. 974442 (-)
Sequence length252
RNA-Seq ExpressionCmoCh01G002210.1
SyntenyCmoCh01G002210.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGATATCAAGGTGAGTTAAGATGAGTTGAACAACCCATGCTTATCAACAAAGCAAAACAAAACAATTTCAAACAAACCCATTCATTGTGATTTAATCATAATCTATAACCCTTAACTAATGTAATATTAGTAATTTTTCAAAAAAAAAAAAAAAACATAATCATATGCTATTGGTTACTTGTTCTAACCTAGCTAACTAGTTAGTCGTGAAAAATTCGGATATCACGGACAATGTCGGCGTATGCTCAGTGTCACAACCATACTATGAAGAGAGTAGGTTGTGACCCTCACGCCATGACAAGCAAAGCGGCGTCCCTCATGAGGCGCCCATCCGCCCATATGCGGGCCAATATAGAAGAGTGCCATTATGCGATCGTGGAGGACGATGCATCATCCAACACACTACCACGCAAAGTGGGCATTGAAGACATGTTGAGACCTAAACACACCAACACACCACCACTCGGGTCTCGAGTCACGTTTGAGATAAATGTTTTAGATATCACGTAACTTTAGGGTAGGGAGAATTTGATCGTATAACTCTGAAAGCTTGATCAACCCAACTTTATCTATATGGTTGAGTTGGGTTCATTACTTTCTTAGAATTGTTTAGGTTAAAAAAATTTACAATTCGAACAATTAGGTTCGGTCTAAAGAAACTTCGACTGGACCTAACTAAAATTTAAGATTACGCAACCGATTTTATATATTATATTTTTTAAAATGGTGACTCATATAAAAATAATATGGACATAAAAAAGCTTTTAAAAATAGAAGGAAAAAAATAAAATAGAGGCAATAATATAAAAATAATGGGTGTGACATTTAGACCCCTTATGCATGATTGATGTTTGTAAGATTCAATGATTAAAAATAATTTCAAACATTATCCATTAAATCTTTGATGTGTAGCAAAAGAAACTCAACATTTTTGAATGTCTATAAATGTAAGCTAAGATCTTGGCCACATCACATGCAAATCCATTGAAACAATAAAAACACAATAATTTTGAAAGTTTTTAAATGTTTTTGAGCCACAAAATATTTATCAACTGGATCTTAGATCAGAAACGGTTATGATGGGTTTCGGGTTCCCATGTGATGTCTATAAAGTCGTTTTTTGACCAATTTTAGTTAACATAATACGTTATAAATACGATCGGTTAATGCATCTTAAGCTGTATATTGTTTTGCTAGGGTGACTGTATTCTCTTCACCAATCATTATCATATAGTTGGTTTTGTTAAAACTAATGATCGAAATGTGATATGGTTTGTGATTTAAAGAGAAATGTGACGAAATGATTGCTCGAGGACGGGCGTATGAAAAGGAAAGACTTAATTTTTTTTTTTGTGAGGGAAAAAACAGAAAATAATGCTATGAATTTGGGAAGCAAAGAAGAGGAAGGACCATGTTTGTATCATGTGAGGATTGTCCCCTTTGCCATGTGCATTAATTTTCCTCAATTTTTCCCCAATTTCTCACCTATTTTTCCCCTTCTCACTTTTAAATGGTGGAAAAAAAAAACTGTTTATTATTATTTTGTGGGTTAAGAAATATATCGTTAGAGTCGAAACCTTATAGAGGATAATATCTATTAGTGGTGGACTTAGACTATTATAAATGACATCAGAGACAGACACTGGGTGATGTGCTAGTGAGGACGTGAACCCTAAAGGGAGATGAACACTGGACAGTGTGCTAGTGAGAACGTTAGGCCCCAAAGGGGGTGGACATTGAATAGTGTGCCAACGAGGATGTTGGGTTCGAAAGAGTCACGTGTGAATTATAAAAAACAACCCCAACTATAAAAAAAAAAAAAAAAAGGAAAACAAATTATGAAATCAAATAGAGGTAAGAATAATTGGGCCAGAAGATTAAAGAAACTTGGCCCAAAAGTTTCATCTTCGTCTTCTGGGGATAGGCCCACAAATGAATGGATTGGGCCTTTGTTACAAACACTGAAATTTACAACTTCACAATGACAAAAACAAATTATAACTAATAGATTCAAAGTAATTTCTAATAATATAAGGATTTAGTCAATACAGAATTTACAATTTGACCTAAAAATATGAAGTTGGGATGGAAAGATGATCACAAATATGACTATTTTCTTCACCAAGTCTATCTGTTAAACGTCAAATGGCGCAAACTTGATTGAAGCCGTCTTTTGGTGATGAACTTTTTCTTCCTAAAAAAGGGTTCATGAGATGATCCAACGAAATCTTTGTCCGTATTTGCCACCATTGTACCCAACATTCAATCTATATATAAGCATTCAACAATCTTCAGAGAGGGTCTTCCTTCCATCCTTCACACTCTCTTTTTCCTCTCTCTCTCTCTCTTCATTTTTCTGGATCCACAAGCACTCTCAGATCTCAATCGCCGCCCTTCTCCTCCGTCTTAAATTCCATTGGATTCTGATCCACTTCCCCAATTCGCCTCTACAAGGTAAGTTTCCCCAACCCCACTTGTTATTTCATAGTTCTGTTGATTACAGATTGTTATATTTGCTTGTTTTCCATGTAATCGAATTGGGTTGTTGTTGTTTGTTCATTTCTTCTCATTTTGGTTACGTGCTGCTCTCCCAGATCGTGGGGCTTTGTTGTATTGTCTGAATTGGACTTGTGTAGTGTTATCTTTAGATTGGGTTGTGAGTTTTTGTTTTGTAGCTTACGATCCATTAGTAATGGCATTGGTATTTGTTAATTAGTATTGGATCTGCTTTATATGAGTGAATATGAATGAGGATTGGGATTTGGGATTGAGGGTTTAGGGTTTATGAATGTTCTTGTTGTTGTTCACTTCAGAAGGGTGCCTATATGCGTTTAATCATTTTAAATCTGTGA

mRNA sequence

ATGGTTGATATCAAGATTGTTATATTTGCTTGTTTTCCATGTAATCGAATTGGGTTGTTGTTGTTTGTTCATTTCTTCTCATTTTGGTTACGTGCTGCTCTCCCAGATCGTGGGGCTTTGTTGTATTGTCTGAATTGGACTTGTGTAGTGTTATCTTTAGATTGGGTTGTGAGTTTTTGTTTTGTAGCTTACGATCCATTAGTAATGGCATTGAAGGGTGCCTATATGCGTTTAATCATTTTAAATCTGTGA

Coding sequence (CDS)

ATGGTTGATATCAAGATTGTTATATTTGCTTGTTTTCCATGTAATCGAATTGGGTTGTTGTTGTTTGTTCATTTCTTCTCATTTTGGTTACGTGCTGCTCTCCCAGATCGTGGGGCTTTGTTGTATTGTCTGAATTGGACTTGTGTAGTGTTATCTTTAGATTGGGTTGTGAGTTTTTGTTTTGTAGCTTACGATCCATTAGTAATGGCATTGAAGGGTGCCTATATGCGTTTAATCATTTTAAATCTGTGA

Protein sequence

MVDIKIVIFACFPCNRIGLLLFVHFFSFWLRAALPDRGALLYCLNWTCVVLSLDWVVSFCFVAYDPLVMALKGAYMRLIILNL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh01G002210CmoCh01G002210gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G002210.1:exon:2441CmoCh01G002210.1:exon:2441exon
CmoCh01G002210.1:exon:2442CmoCh01G002210.1:exon:2442exon
CmoCh01G002210.1:exon:2443CmoCh01G002210.1:exon:2443exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G002210.1:cdsCmoCh01G002210.1:cds_3CDS
CmoCh01G002210.1:cdsCmoCh01G002210.1:cds_2CDS
CmoCh01G002210.1:cdsCmoCh01G002210.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh01G002210.1CmoCh01G002210.1-proteinpolypeptide