Cmc12g0328451.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc12g0328451.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPol
LocationCMiso1.1chr12: 19629212 .. 19630672 (-)
Sequence length1461
RNA-Seq ExpressionCmc12g0328451.1
SyntenyCmc12g0328451.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCACATAATATATATCATTCATGAAAATGAGGATTATGAACTTAAATCTGTTGACGAATGTCTAAATAGAAAGGATTGGCCCAAGTGGAAAGAAGCCATCCATGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTCATACACCTAAAGATGTAAAACCTGTGGGATTTAAATGGGTGTTTGTGCGTAAACAAAATAAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGATTAGACATCGATTATGAGGAAACATATTCTCCTGTGGTGGATGCTATTACATTAAGATATTTAATTAGTCTGACTGTATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTATAATATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACATGAATCATATAATTCAAACTCTAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAACTGGAACTCCTGAAGAGTTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCGATGAAATTTTTATTCATCAATCGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAATGATATCTTTCGATCTTGGGAAGACAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAACATTTTCAGTAAATTTGTTAGCAAGATATAGTTTTTCTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTGATATAGGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGAATATTTATCTGATCCACACAAAGCAAGATCTCAAACATGTTATCTATTTACATGTGGAGGAACTATTATATCTTGGCGGTTTGTAAAGCAAACCATGACGACCACTTCATCGAATCATGCAGAAATTTTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTCAATGACTCATCATATTCGAGAAACATGTGGTTTGTCTTTTAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAGCACAAATCAAAGAGGGTATATAA

mRNA sequence

ATGTTGCACATAATATATATCATTCATGAAAATGAGGATTATGAACTTAAATCTGTTGACGAATGTCTAAATAGAAAGGATTGGCCCAAGTGGAAAGAAGCCATCCATGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTCATACACCTAAAGATGTAAAACCTGTGGGATTTAAATGGGTGTTTGTGCGTAAACAAAATAAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGATTAGACATCGATTATGAGGAAACATATTCTCCTGTGGTGGATGCTATTACATTAAGATATTTAATTAGTCTGACTGTATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTATAATATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACATGAATCATATAATTCAAACTCTAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAACTGGAACTCCTGAAGAGTTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCGATGAAATTTTTATTCATCAATCGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAATGATATCTTTCGATCTTGGGAAGACAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAACATTTTCAGTAAATTTGTTAGCAAGATATAGTTTTTCTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTGATATAGGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGAATATTTATCTGATCCACACAAAGCAAGATCTCAAACATGTTATCTATTTACATGTGGAGGAACTATTATATCTTGGCGGTTTGTAAAGCAAACCATGACGACCACTTCATCGAATCATGCAGAAATTTTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTCAATGACTCATCATATTCGAGAAACATGTGGTTTGTCTTTTAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAGCACAAATCAAAGAGGGTATATAA

Coding sequence (CDS)

ATGTTGCACATAATATATATCATTCATGAAAATGAGGATTATGAACTTAAATCTGTTGACGAATGTCTAAATAGAAAGGATTGGCCCAAGTGGAAAGAAGCCATCCATGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTCATACACCTAAAGATGTAAAACCTGTGGGATTTAAATGGGTGTTTGTGCGTAAACAAAATAAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGATTAGACATCGATTATGAGGAAACATATTCTCCTGTGGTGGATGCTATTACATTAAGATATTTAATTAGTCTGACTGTATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTATAATATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACATGAATCATATAATTCAAACTCTAGAGAATTATGTTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAACTGGAACTCCTGAAGAGTTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCGATGAAATTTTTATTCATCAATCGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAATGATATCTTTCGATCTTGGGAAGACAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAACATTTTCAGTAAATTTGTTAGCAAGATATAGTTTTTCTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTGATATAGGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGAATATTTATCTGATCCACACAAAGCAAGATCTCAAACATGTTATCTATTTACATGTGGAGGAACTATTATATCTTGGCGGTTTGTAAAGCAAACCATGACGACCACTTCATCGAATCATGCAGAAATTTTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTCAATGACTCATCATATTCGAGAAACATGTGGTTTGTCTTTTAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAGCACAAATCAAAGAGGGTATATAA

Protein sequence

MLHIIYIIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFRSWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMTTTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEGI
Homology
BLAST of Cmc12g0328451.1 vs. NCBI nr
Match: RVW59049.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 761.9 bits (1966), Expect = 3.3e-216
Identity = 364/479 (75.99%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 528  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 587

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 588  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 647

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 648  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 707

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 708  SEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 767

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 768  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKKDPFR 827

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYS +PT+RHWN +KH+LR
Sbjct: 828  PCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILR 887

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 888  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 947

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 948  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1006

BLAST of Cmc12g0328451.1 vs. NCBI nr
Match: RVW50867.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 761.1 bits (1964), Expect = 5.7e-216
Identity = 363/479 (75.78%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 541  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 600

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 601  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 660

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 661  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 720

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 721  SEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 780

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 781  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKKDSFR 840

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYLSAIGALMYLAN TRPDI FSVNLLA+YS +PT+RHWN +KH+LR
Sbjct: 841  PCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLAKYSSAPTRRHWNGIKHILR 900

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 901  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 960

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 961  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1019

BLAST of Cmc12g0328451.1 vs. NCBI nr
Match: RVW51062.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 760.8 bits (1963), Expect = 7.4e-216
Identity = 363/479 (75.78%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 531  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 590

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 591  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 650

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 651  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 710

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 711  SEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 770

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 771  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKKDPFR 830

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYL+AIGALMYLAN TRPDI FSVNLLARYS +PT+RHWN +KH+LR
Sbjct: 831  PCEKDEELLGPEVPYLNAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILR 890

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 891  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 950

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 951  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1009

BLAST of Cmc12g0328451.1 vs. NCBI nr
Match: RVX08899.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 759.2 bits (1959), Expect = 2.1e-215
Identity = 363/479 (75.78%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7   IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
           II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 373 IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 432

Query: 67  FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
           FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 433 FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLVVSEGLDMRL 492

Query: 127 MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
           M+V+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 493 MNVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 552

Query: 187 SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
           SEYLLKEGY NNPICPC+FIKKS++ FAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 553 SEYLLKEGYVNNPICPCIFIKKSETRFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 612

Query: 247 DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
           DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVKND FR
Sbjct: 613 DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKNDPFR 672

Query: 307 SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
             E +EELLGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYS +PT+RHWN +KH+LR
Sbjct: 673 PCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILR 732

Query: 367 YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
           YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 733 YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 792

Query: 427 TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
            TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 793 ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 851

BLAST of Cmc12g0328451.1 vs. NCBI nr
Match: RVX16158.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 757.3 bits (1954), Expect = 8.2e-215
Identity = 362/479 (75.57%), Postives = 408/479 (85.18%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 541  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 600

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 601  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 660

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 661  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 720

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLK+GY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 721  SEYLLKKGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 780

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LK FYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 781  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKCFYMDKAHPLSSPMVVRSLDVKKDPFR 840

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYS +PT+RHWN +KH+LR
Sbjct: 841  PCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSTPTRRHWNGIKHILR 900

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 901  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 960

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 961  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1019

BLAST of Cmc12g0328451.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 277.3 bits (708), Expect = 3.2e-73
Identity = 163/469 (34.75%), Postives = 256/469 (54.58%), Query Frame = 0

Query: 18   SVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRKQNKNNEV 77
            S DE   R D   W+EAI+ ELN+      +  +   P++   V  +WVF  K N+    
Sbjct: 893  SFDEIQYRDDKSSWEEAINTELNAHKINNTW-TITKRPENKNIVDSRWVFSVKYNELGNP 952

Query: 78   TRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVIIYLYGS 137
             RYKARLVA+GF+Q+  IDYEET++PV    + R+++SL +  NL +H MDV   +L G+
Sbjct: 953  IRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGT 1012

Query: 138  LENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQN 197
            L+ EIYM++P+G       + NS  +C  KL +++YGLKQ+ R W+    + L +  + N
Sbjct: 1013 LKEEIYMRLPQGI------SCNSDNVC--KLNKAIYGLKQAARCWFEVFEQALKECEFVN 1072

Query: 198  NPICPCVFI--KKSQSGFAIIAVYVDDLNI-TGTPEEFSKAIEYLKKEFEMKDLGKTKFC 257
            + +  C++I  K + +    + +YVDD+ I TG     +    YL ++F M DL + K  
Sbjct: 1073 SSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHF 1132

Query: 258  LGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFRSWEDNEEL 317
            +G++IE   D+I++ QS Y +KIL +F M+  + ++ P+  +   +  ++  S ED    
Sbjct: 1133 IGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSK---INYELLNSDED---- 1192

Query: 318  LGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDI 377
                 P  S IG LMY+   TRPD+T +VN+L+RYS       W  +K VLRYL+GTID+
Sbjct: 1193 --CNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDM 1252

Query: 378  GLFYSNKSNFD--LVGYADAEYLSDPHKARSQTCYLFTC-GGTIISWRFVKQTMTTTSSN 437
             L +     F+  ++GY D+++       +S T YLF      +I W   +Q     SS 
Sbjct: 1253 KLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASST 1312

Query: 438  HAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIA 481
             AE  A+ EA RE +WL+ +         ++     P  ++EDN  CI+
Sbjct: 1313 EAEYMALFEAVREALWLKFL------LTSINIKLENPIKIYEDNQGCIS 1337

BLAST of Cmc12g0328451.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.2e-73
Identity = 162/443 (36.57%), Postives = 252/443 (56.88%), Query Frame = 0

Query: 11   NEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRK 70
            ++D E +S+ E L+  +  +  +A+  E+ SL K   +  +V  PK  +P+  KWVF  K
Sbjct: 806  SDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTY-KLVELPKGKRPLKCKWVFKLK 865

Query: 71   QNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVV 130
            ++ + ++ RYKARLV +GF Q+  ID++E +SPVV   ++R ++SL    +L++  +DV 
Sbjct: 866  KDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVK 925

Query: 131  IIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRLSEYL 190
              +L+G LE EIYM+ PEGF++          +C  KL +SLYGLKQ+ R WY +   ++
Sbjct: 926  TAFLHGDLEEEIYMEQPEGFEV----AGKKHMVC--KLNKSLYGLKQAPRQWYMKFDSFM 985

Query: 191  LKEGYQNNPICPCVFIKK-SQSGFAIIAVYVDDLNITGTPEE-FSKAIEYLKKEFEMKDL 250
              + Y      PCV+ K+ S++ F I+ +YVDD+ I G  +   +K    L K F+MKDL
Sbjct: 986  KSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDL 1045

Query: 251  GKTKFCLGLQI--EHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 310
            G  +  LG++I  E  + ++++ Q  Y E++L+RF M  A P++ P+       K     
Sbjct: 1046 GPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPT 1105

Query: 311  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 370
            + E+   +   +VPY SA+G+LMY    TRPDI  +V +++R+  +P K HW  VK +LR
Sbjct: 1106 TVEEKGNM--AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1165

Query: 371  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 430
            YLRGT    L +   S+  L GY DA+   D    +S T YLFT  G  ISW+   Q   
Sbjct: 1166 YLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCV 1225

Query: 431  TTSSNHAEIFAIHEASRECVWLR 450
              S+  AE  A  E  +E +WL+
Sbjct: 1226 ALSTTEAEYIAATETGKEMIWLK 1238

BLAST of Cmc12g0328451.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.4e-61
Identity = 143/447 (31.99%), Postives = 228/447 (51.01%), Query Frame = 0

Query: 30   KWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRKQNKNNEVTRYKARLVAQGF 89
            +W++A+ +E+N+      +  V   P  V  VG +W+F +K N +  + RYKARLVA+G+
Sbjct: 950  RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGY 1009

Query: 90   SQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVIIYLYGSLENEIYMKIPEG 149
            +QR  +DY ET+SPV+ + ++R ++ + V  +  +  +DV   +L G+L +E+YM  P G
Sbjct: 1010 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPG 1069

Query: 150  FKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKS 209
            F          R     +L++++YGLKQ+ R WY  L  YLL  G+ N+     +F+ + 
Sbjct: 1070 FV------DKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1129

Query: 210  QSGFAIIAVYVDDLNITGTPEEFSK-AIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFI 269
                  + VYVDD+ ITG      K  ++ L + F +K+     + LG++ + +   + +
Sbjct: 1130 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHL 1189

Query: 270  HQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFRSWEDNEELLGPEVPYLSAIGAL 329
             Q  YT  +L R  M  A P+  PM             +     +L  P   Y   +G+L
Sbjct: 1190 SQRRYTLDLLARTNMLTAKPVATPMATSPK-------LTLHSGTKLPDP-TEYRGIVGSL 1249

Query: 330  MYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVG 389
             YLA  TRPD++++VN L++Y   PT  HWN +K VLRYL GT D G+F    +   L  
Sbjct: 1250 QYLA-FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHA 1309

Query: 390  YADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMTTTSSNHAEIFAIHEASRECVWL 449
            Y+DA++  D     S   Y+   G   ISW   KQ     SS  AE  ++   S E  W+
Sbjct: 1310 YSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWI 1369

Query: 450  RSMTHHIRETCGLSFSKNLPTILFEDN 476
             S+   +    G+  S   P +++ DN
Sbjct: 1370 CSLLTEL----GIQLSH--PPVIYCDN 1375

BLAST of Cmc12g0328451.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-59
Identity = 140/447 (31.32%), Postives = 232/447 (51.90%), Query Frame = 0

Query: 30   KWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRKQNKNNEVTRYKARLVAQGF 89
            +W+ A+ +E+N+      +  V   P  V  VG +W+F +K N +  + RYKARLVA+G+
Sbjct: 967  RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGY 1026

Query: 90   SQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVIIYLYGSLENEIYMKIPEG 149
            +QR  +DY ET+SPV+ + ++R ++ + V  +  +  +DV   +L G+L +++YM  P G
Sbjct: 1027 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPG 1086

Query: 150  FKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKS 209
            F   +  N     +C  KL+++LYGLKQ+ R WY  L  YLL  G+ N+     +F+ + 
Sbjct: 1087 FIDKDRPN----YVC--KLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1146

Query: 210  QSGFAIIAVYVDDLNITGT-PEEFSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFI 269
                  + VYVDD+ ITG  P      ++ L + F +KD  +  + LG++ + +   + +
Sbjct: 1147 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHL 1206

Query: 270  HQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFRSWEDNEELLGPEVPYLSAIGAL 329
             Q  Y   +L R  M  A P+  PM   +   K  ++   +     L     Y   +G+L
Sbjct: 1207 SQRRYILDLLARTNMITAKPVTTPM---APSPKLSLYSGTK-----LTDPTEYRGIVGSL 1266

Query: 330  MYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVG 389
             YLA  TRPDI+++VN L+++   PT+ H   +K +LRYL GT + G+F    +   L  
Sbjct: 1267 QYLA-FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHA 1326

Query: 390  YADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMTTTSSNHAEIFAIHEASRECVWL 449
            Y+DA++  D     S   Y+   G   ISW   KQ     SS  AE  ++   S E  W+
Sbjct: 1327 YSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWI 1386

Query: 450  RSMTHHIRETCGLSFSKNLPTILFEDN 476
             S+   +    G+  ++  P +++ DN
Sbjct: 1387 CSLLTEL----GIRLTR--PPVIYCDN 1392

BLAST of Cmc12g0328451.1 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-25
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 0

Query: 319 VPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFY 378
           VPYLSA+GA+MYL   TRPD+  +V +L++++  P   HW  +K VLRYL+ T   GL +
Sbjct: 4   VPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEF 63

Query: 379 SNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMTTTSSNHAEIFAI 438
           +      LVGY+DA++  D    RS + YLF   G  +SWR  KQ     SS   E  A+
Sbjct: 64  TRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMAL 123

Query: 439 HEASRECVWLRSMTHHIR 457
            EA++E VWL   T   +
Sbjct: 124 SEATQEAVWLTVRTRRTK 141

BLAST of Cmc12g0328451.1 vs. ExPASy TrEMBL
Match: A0A2N9FB90 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12335 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 3.2e-217
Identity = 370/485 (76.29%), Postives = 412/485 (84.95%), Query Frame = 0

Query: 1   MLHIIYIIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKP 60
           M+   YII  + + E ++V++C  R DWPKWKEAI AELNSL KREVFGP+V TP+ V P
Sbjct: 22  MMRSQYIISNDHEIEPQTVEQCRRRNDWPKWKEAIQAELNSLLKREVFGPIVQTPEGVMP 81

Query: 61  VGFKWVFVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCE 120
           VG+KWVFVRK+N+ NE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E
Sbjct: 82  VGYKWVFVRKRNEKNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLVVTE 141

Query: 121 NLDMHLMDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGR 180
           NLDM LMDVV  YLYGSL+N+IYMKIPEG+K+ E+YNS SR + SIKLQRSLYGLKQSGR
Sbjct: 142 NLDMRLMDVVTAYLYGSLDNDIYMKIPEGYKMPEAYNSKSRNMYSIKLQRSLYGLKQSGR 201

Query: 181 MWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLK 240
           MWYNRLSEYLLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN+ GTPEE +K  +YLK
Sbjct: 202 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 261

Query: 241 KEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDV 300
            EFEMKDLGKTKFCLGLQIEHL D I IHQSTYTEK+LK F+MDKAHPL+ PMVVRSLDV
Sbjct: 262 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYTEKVLKHFHMDKAHPLSTPMVVRSLDV 321

Query: 301 KNDIFRSWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNE 360
           K D FR  E  EE LGP+VPYLSAIGALMYLAN TRPDI FSVNLLARYS +PT RHWN 
Sbjct: 322 KKDPFRPQEVGEETLGPKVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 381

Query: 361 VKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRF 420
           VKHVLRYLRGT D+GLFY NKSN  LVGYADA YLSDPHK RSQT YLFTCG T ISWR 
Sbjct: 382 VKHVLRYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCGNTAISWRS 441

Query: 421 VKQTMTTTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIA 480
           VKQT++ TSSNH+EI AIHEASRECVWLRS+  HI+E CGLS  K+ PTIL+EDN ACI 
Sbjct: 442 VKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIQEKCGLSSIKDNPTILYEDNAACIT 501

Query: 481 QIKEG 486
           QI+ G
Sbjct: 502 QIRGG 506

BLAST of Cmc12g0328451.1 vs. ExPASy TrEMBL
Match: A0A438FGC5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2905 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.6e-216
Identity = 364/479 (75.99%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 528  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 587

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 588  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 647

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 648  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 707

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 708  SEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 767

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 768  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKKDPFR 827

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYS +PT+RHWN +KH+LR
Sbjct: 828  PCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILR 887

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 888  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 947

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 948  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1006

BLAST of Cmc12g0328451.1 vs. ExPASy TrEMBL
Match: A0A438ET65 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_127 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.7e-216
Identity = 363/479 (75.78%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 541  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 600

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 601  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 660

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 661  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 720

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 721  SEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 780

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 781  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKKDSFR 840

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYLSAIGALMYLAN TRPDI FSVNLLA+YS +PT+RHWN +KH+LR
Sbjct: 841  PCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLAKYSSAPTRRHWNGIKHILR 900

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 901  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 960

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 961  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1019

BLAST of Cmc12g0328451.1 vs. ExPASy TrEMBL
Match: A0A438ETU3 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_69 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.6e-216
Identity = 363/479 (75.78%), Postives = 409/479 (85.39%), Query Frame = 0

Query: 7    IIHENEDYELKSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWV 66
            II  +ED E ++V+EC +R DWPKWKEAI AELNSLTKREVFGPVV TP+DVKPVG+KWV
Sbjct: 531  IIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWV 590

Query: 67   FVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHL 126
            FVRK+N+NNE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V E LDM L
Sbjct: 591  FVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRL 650

Query: 127  MDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRL 186
            MDV+  YLYGS++N+IYMKIPEGFK+ ++ N+  R + SIKLQRSLYGLKQSGRMWYNRL
Sbjct: 651  MDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRL 710

Query: 187  SEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEMK 246
            SEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN+ GTPEE ++   YLKKEFEMK
Sbjct: 711  SEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLKKEFEMK 770

Query: 247  DLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFR 306
            DLGKTKFCLGLQIEH  + + +HQSTY +K+LKRFYMDKAHPL+ PMVVRSLDVK D FR
Sbjct: 771  DLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDVKKDPFR 830

Query: 307  SWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLR 366
              E +EELLGPEVPYL+AIGALMYLAN TRPDI FSVNLLARYS +PT+RHWN +KH+LR
Sbjct: 831  PCEKDEELLGPEVPYLNAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILR 890

Query: 367  YLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMT 426
            YLRGT D+GLFYS +S   L+GYADA YLSDPHK RSQT Y+F C GT ISWR VKQTM 
Sbjct: 891  YLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMV 950

Query: 427  TTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
             TSSNH+EI AIHEASREC+WLRSM  HIRE+CGLS  K  PT LFEDN ACIAQI  G
Sbjct: 951  ATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGG 1009

BLAST of Cmc12g0328451.1 vs. ExPASy TrEMBL
Match: A0A2N9IR78 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54505 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 6.1e-216
Identity = 369/480 (76.88%), Postives = 409/480 (85.21%), Query Frame = 0

Query: 8   IHENEDYEL--KSVDECLNRKDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKW 67
           I  + D+E+  ++V++C  R DWPKWKEAI AELNSL KREVFGP+V TP+ V PVG+KW
Sbjct: 55  ITRSNDHEIEPQTVEQCRRRNDWPKWKEAIQAELNSLLKREVFGPIVQTPEGVMPVGYKW 114

Query: 68  VFVRKQNKNNEVTRYKARLVAQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMH 127
           VFVRK+N+ NE+ RYKARLVAQGFSQR  IDYEETYSPV+DAIT R+LISL V ENLDM 
Sbjct: 115 VFVRKRNEKNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLVVTENLDMR 174

Query: 128 LMDVVIIYLYGSLENEIYMKIPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNR 187
           LMDVV  YLYGSL+N+IYMKIPEG+K+ E+YNS SR + SIKLQRSLYGLKQSGRMWYNR
Sbjct: 175 LMDVVTAYLYGSLDNDIYMKIPEGYKMPEAYNSKSRNMYSIKLQRSLYGLKQSGRMWYNR 234

Query: 188 LSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNITGTPEEFSKAIEYLKKEFEM 247
           LSEYLLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN+ GTPEE +K  +YLK EFEM
Sbjct: 235 LSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLKNEFEM 294

Query: 248 KDLGKTKFCLGLQIEHLADEIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIF 307
           KDLGKTKFCLGLQIEHL D I IHQSTY EK+LK F+MDKAHPL+ PMVVRSLDVK D F
Sbjct: 295 KDLGKTKFCLGLQIEHLPDGILIHQSTYIEKVLKHFHMDKAHPLSTPMVVRSLDVKKDPF 354

Query: 308 RSWEDNEELLGPEVPYLSAIGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVL 367
           R  E  EE LGPEVPYLSAIGALMYLAN TRPDI FSVNLLARYS +PT RHWN VKHVL
Sbjct: 355 RPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNGVKHVL 414

Query: 368 RYLRGTIDIGLFYSNKSNFDLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTM 427
           RYLRGT D+GLFY NKSN  LVGYADA YLSDPHK RSQT YLFTCG T ISWR VKQT+
Sbjct: 415 RYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCGNTAISWRSVKQTI 474

Query: 428 TTTSSNHAEIFAIHEASRECVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKEG 486
           + TSSNH+EI AIHEASRECVWLRS+  HIRE CGLS  K+ PTIL+EDN ACI QI+ G
Sbjct: 475 SATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLSSIKDNPTILYEDNAACITQIRGG 534

BLAST of Cmc12g0328451.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 236.1 bits (601), Expect = 5.9e-62
Identity = 148/455 (32.53%), Postives = 242/455 (53.19%), Query Frame = 0

Query: 26  KDWPKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRKQNKNNEVTRYKARLV 85
           K++  W  A+  E+ ++     +  +   P + KP+G KWV+  K N +  + RYKARLV
Sbjct: 93  KEFLVWCGAMDDEIGAMETTHTW-EICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLV 152

Query: 86  AQGFSQRLDIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVIIYLYGSLENEIYMK 145
           A+G++Q+  ID+ ET+SPV    +++ +++++   N  +H +D+   +L G L+ EIYMK
Sbjct: 153 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 212

Query: 146 IPEGFKIHESYNSNSRELCSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVF 205
           +P G+   +  +     +C +K  +S+YGLKQ+ R W+ + S  L+  G+  +      F
Sbjct: 213 LPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 272

Query: 206 IKKSQSGFAIIAVYVDDLNITGTPEEFSKAIE-YLKKEFEMKDLGKTKFCLGLQIEHLAD 265
           +K + + F  + VYVDD+ I    +     ++  LK  F+++DLG  K+ LGL+I   A 
Sbjct: 273 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 332

Query: 266 EIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKNDIFRSWEDNEELLGPEVPYLSA 325
            I I Q  Y   +L    +    P ++PM          +  S     + +  +  Y   
Sbjct: 333 GINICQRKYALDLLDETGLLGCKPSSVPM-------DPSVTFSAHSGGDFVDAKA-YRRL 392

Query: 326 IGALMYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNF 385
           IG LMYL   TR DI+F+VN L+++S +P   H   V  +L Y++GT+  GLFYS+++  
Sbjct: 393 IGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 452

Query: 386 DLVGYADAEYLSDPHKARSQTCYLFTCGGTIISWRFVKQTMTTTSSNHAEIFAIHEASRE 445
            L  ++DA + S     RS   Y    G ++ISW+  KQ + + SS  AE  A+  A+ E
Sbjct: 453 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 512

Query: 446 CVWLRSMTHHIRETCGLSFSKNLPTILFEDNTACI 480
            +WL      ++    L  SK  PT+LF DNTA I
Sbjct: 513 MMWLAQFFRELQ----LPLSK--PTLLFCDNTAAI 529

BLAST of Cmc12g0328451.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 4.4e-25
Identity = 71/233 (30.47%), Postives = 115/233 (49.36%), Query Frame = 0

Query: 216 IAVYVDDLNITGTPEE-FSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYT 275
           + +YVDD+ +TG+     +  I  L   F MKDLG   + LG+QI+     +F+ Q+ Y 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 276 EKILKRFYMDKAHPLNIPMVVRSLDVKNDIFRSWEDNEELLGPEVPYLSAIGALMYLANN 335
           E+IL    M    P++ P+ ++          S     +   P   + S +GAL YL   
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLK--------LNSSVSTAKYPDPS-DFRSIVGALQYL-TL 122

Query: 336 TRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAEY 395
           TRPDI+++VN++ +    PT   ++ +K VLRY++GTI  GL+    S  ++  + D+++
Sbjct: 123 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 182

Query: 396 LSDPHKARSQTCYLFTCGGTIISWRFVKQTMTTTSSNHAEIFAIHEASRECVW 448
                  RS T +    G  IISW   +Q   + SS   E  A+   + E  W
Sbjct: 183 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc12g0328451.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-10
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0

Query: 329 MYLANNTRPDITFSVNLLARYSFSPTKRHWNEVKHVLRYLRGTIDIGLFYSNKSNFDLVG 388
           MYL   TRPD+TF+VN L+++S +        V  VL Y++GT+  GLFYS  S+  L  
Sbjct: 1   MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 389 YADAEYLSDPHKARSQT 406
           +AD+++ S P   RS T
Sbjct: 61  FADSDWASCPDTRRSVT 76

BLAST of Cmc12g0328451.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-10
Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 0

Query: 29  PKWKEAIHAELNSLTKREVFGPVVHTPKDVKPVGFKWVFVRKQNKNNEVTRYKARLVAQG 88
           P W +A+  EL++L++ + +  +V  P +   +G KWVF  K + +  + R KARLVA+G
Sbjct: 38  PGWCQAMQEELDALSRNKTW-ILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 97

Query: 89  FSQRLDIDYEETYSPVVDAITLRYLISL 117
           F Q   I + ETYSPVV   T+R ++++
Sbjct: 98  FHQEEGIYFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RVW59049.13.3e-21675.99Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW50867.15.7e-21675.78Copia protein [Vitis vinifera][more]
RVW51062.17.4e-21675.78Copia protein [Vitis vinifera][more]
RVX08899.12.1e-21575.78Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVX16158.18.2e-21575.57Copia protein [Vitis vinifera][more]
Match NameE-valueIdentityDescription
P041463.2e-7334.75Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109783.2e-7336.57Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q9ZT946.4e-6131.99Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.0e-5931.32Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P0CV721.5e-2542.03Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
Match NameE-valueIdentityDescription
A0A2N9FB903.2e-21776.29Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A438FGC51.6e-21675.99Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438ET652.7e-21675.78Copia protein OS=Vitis vinifera OX=29760 GN=GIP_127 PE=4 SV=1[more]
A0A438ETU33.6e-21675.78Copia protein OS=Vitis vinifera OX=29760 GN=GIP_69 PE=4 SV=1[more]
A0A2N9IR786.1e-21676.88Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
Match NameE-valueIdentityDescription
AT4G23160.15.9e-6232.53cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.4e-2530.47DNA/RNA polymerases superfamily protein [more]
ATMG00240.15.2e-1042.86Gag-Pol-related retrotransposon family protein [more]
ATMG00820.15.2e-1038.64Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 51..293
e-value: 3.7E-61
score: 206.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 16..377
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 387..483
e-value: 8.80797E-27
score: 103.317
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 51..449

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc12g0328451Cmc12g0328451gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0328451.1-exonCmc12g0328451.1-exon-CMiso1.1chr12:19629212..19630672exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0328451.1-cdsCmc12g0328451.1-cds-CMiso1.1chr12:19629212..19630672CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc12g0328451.1Cmc12g0328451.1-proteinpolypeptide