Cmc12g0325341.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc12g0325341.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr12: 15493201 .. 15495018 (+)
Sequence length1818
RNA-Seq ExpressionCmc12g0325341.1
SyntenyCmc12g0325341.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGCTTGATTTAGCATAGGTCTATTTCTAAAATTAATTGATTATCAAATAAAAATTAAATTAAATTTCAAAATGCATAACTTACACTCCTTTCTAATTCCGAAGGCAATAAGCTCTATAAGGTAACCACTAAAATATTTGTTAACACATTCAATACAATTGTTCGACTAGATTATATCTTACTAATTTAATTTCCTTCCTCTCCTTTGTAATTTTATGATACATCATTTTATAAATCCTTAACTGACCAAAATATATAATAATAATACAAATAAAGCACGTGTCTAAATCTAATGAAACACGTTCAAAACAAACTATACGCAACACCACAGCAGATCAGAACCCACTGAGAAACCTCTGGAAGCAACGGAACCCTAAGTACTGAGCGCAGAACCTCTCCATTTCATCGCCGCCTCTCTCCCGGCAAACCTCCGCCTCCATTTCCGCCACCGTCTCGTCCCAATTCCTCACAAGTCCGTTGCAATCCCATCCGTTGAAGTCCACCTTCGCCTCCGACACCGCATCCAAGATCTCCTGCAGGCCGACGATCCGACGGCTCACCTTCCTCCTCGCTTCCCTCACCGCCGGATCAATCCCTGGCACCGAGTCCAGCCTCAGAAGAAGACTCATCAAGGCCTCGTTCATCCTCAGCTTCTCGAGTTCGTTGCTCCTAACGGCGTCGACCGTCTCCTGGCGCTGGATTAGAGTCTGGATCTGATCAGCTTCTCTGTCGACGGCTGCGATCGTTTTGAAGAGATTGCGGATCCGGTGAGATCGGTAGGCGGCTTGGATCTTGGAGGCGGCGGGGGAGGAGGATTGGAGGAGAGGAGAAGGTTGGATGAGAATTGATGTGGAGTTGGGAGGGGTAGAATGGTCATTGTGAAAAGAGTGGGAGAAAGAGGTGGTGGCGGTGGTGTAGTAGAAGGATGTGGTATTCATGGAGGAAGGCGATGGAGGGTGAAGGGCGGGGGAGAAGAAGTGTGGAAGTGGAATATTGATAAATTTAAAAATTTTGAAAGTGAAATTATGTGTGAGATATGGAGGAGCAGAGTGGCGACCGTTTTACGAGCATCCGATGATCTCCTTTTCCATAGTGGACCATAATCATTCTACTTCACTTCTCTTTTTCATTGTGTTTTTTTTTTTTCTTCTTCTTTTTCCTTTTTATTTTTTCCTTAAAATTTATCCTATTTTATAATTCATATAAATCTTTTTAAATTACTTTGTTAAATTATTTAAACGCAAAAATTTTGGTGAGACAATTTTGAATTTTGAATTTTGAAATTCCATCCTCCAAACACACTATCTATCCTGACTATTAAGTTTGATGATATTTTTCATCGTACTAAATTAAAGATAAAAATGACTAAAGTTCTACAAAATACAAAATAATACAACAAATTATCACAAATTCGAATTCCTAAATTTAAAAGATTTTCCTGACTATTAAATTTAAAGACCAAAACAACTACTTCTACAGAAAGAAAAAAATAAATTAAAAGCTAATTTAGAAACTCCTAAATATATAGGGTTCTTATTTTATATATAAAAAAAAAAAGTCCCTAAAGTTCAAATTTCATATTTCATATATGTTGTTTGTTTTAAATACTATGAAATAAGTTCTCTACTCCCTCACATTTTCTTCAGTTATTTGTTTTTTTTTTTTATTTTTCTTTCTTTTATTTTTCTTTTTTCAATTTGTAGGATAATCCAAACCGTTTAAATTTTCTATTTCATTTTTGTCATCTTCGATAAAAAATCTAAATTGTTTAGAATATTAGTAAAAATGTTAATAAAGAGTTATGTTCTATTGTACTT

mRNA sequence

TGGGCTTGATTTAGCATAGGTCTATTTCTAAAATTAATTGATTATCAAATAAAAATTAAATTAAATTTCAAAATGCATAACTTACACTCCTTTCTAATTCCGAAGGCAATAAGCTCTATAAGGTAACCACTAAAATATTTGTTAACACATTCAATACAATTGTTCGACTAGATTATATCTTACTAATTTAATTTCCTTCCTCTCCTTTGTAATTTTATGATACATCATTTTATAAATCCTTAACTGACCAAAATATATAATAATAATACAAATAAAGCACGTGTCTAAATCTAATGAAACACGTTCAAAACAAACTATACGCAACACCACAGCAGATCAGAACCCACTGAGAAACCTCTGGAAGCAACGGAACCCTAAGTACTGAGCGCAGAACCTCTCCATTTCATCGCCGCCTCTCTCCCGGCAAACCTCCGCCTCCATTTCCGCCACCGTCTCGTCCCAATTCCTCACAAGTCCGTTGCAATCCCATCCGTTGAAGTCCACCTTCGCCTCCGACACCGCATCCAAGATCTCCTGCAGGCCGACGATCCGACGGCTCACCTTCCTCCTCGCTTCCCTCACCGCCGGATCAATCCCTGGCACCGAGTCCAGCCTCAGAAGAAGACTCATCAAGGCCTCGTTCATCCTCAGCTTCTCGAGTTCGTTGCTCCTAACGGCGTCGACCGTCTCCTGGCGCTGGATTAGAGTCTGGATCTGATCAGCTTCTCTGTCGACGGCTGCGATCGTTTTGAAGAGATTGCGGATCCGGTGAGATCGGTAGGCGGCTTGGATCTTGGAGGCGGCGGGGGAGGAGGATTGGAGGAGAGGAGAAGGTTGGATGAGAATTGATGTGGAGTTGGGAGGGGTAGAATGGTCATTGTGAAAAGAGTGGGAGAAAGAGGTGGTGGCGGTGGTGTAGTAGAAGGATGTGGTATTCATGGAGGAAGGCGATGGAGGGTGAAGGGCGGGGGAGAAGAAGTGTGGAAGTGGAATATTGATAAATTTAAAAATTTTGAAAGTGAAATTATGTGTGAGATATGGAGGAGCAGAGTGGCGACCGTTTTACGAGCATCCGATGATCTCCTTTTCCATAGTGGACCATAATCATTCTACTTCACTTCTCTTTTTCATTGTGTTTTTTTTTTTTCTTCTTCTTTTTCCTTTTTATTTTTTCCTTAAAATTTATCCTATTTTATAATTCATATAAATCTTTTTAAATTACTTTGTTAAATTATTTAAACGCAAAAATTTTGGTGAGACAATTTTGAATTTTGAATTTTGAAATTCCATCCTCCAAACACACTATCTATCCTGACTATTAAGTTTGATGATATTTTTCATCGTACTAAATTAAAGATAAAAATGACTAAAGTTCTACAAAATACAAAATAATACAACAAATTATCACAAATTCGAATTCCTAAATTTAAAAGATTTTCCTGACTATTAAATTTAAAGACCAAAACAACTACTTCTACAGAAAGAAAAAAATAAATTAAAAGCTAATTTAGAAACTCCTAAATATATAGGGTTCTTATTTTATATATAAAAAAAAAAAGTCCCTAAAGTTCAAATTTCATATTTCATATATGTTGTTTGTTTTAAATACTATGAAATAAGTTCTCTACTCCCTCACATTTTCTTCAGTTATTTGTTTTTTTTTTTTATTTTTCTTTCTTTTATTTTTCTTTTTTCAATTTGTAGGATAATCCAAACCGTTTAAATTTTCTATTTCATTTTTGTCATCTTCGATAAAAAATCTAAATTGTTTAGAATATTAGTAAAAATGTTAATAAAGAGTTATGTTCTATTGTACTT

Coding sequence (CDS)

ATGGTCATTGTGAAAAGAGTGGGAGAAAGAGGTGGTGGCGGTGGTGTAGTAGAAGGATGTGGTATTCATGGAGGAAGGCGATGGAGGGTGAAGGGCGGGGGAGAAGAAGTGTGGAAGTGGAATATTGATAAATTTAAAAATTTTGAAAGTGAAATTATGTGTGAGATATGGAGGAGCAGAGTGGCGACCGTTTTACGAGCATCCGATGATCTCCTTTTCCATAGTGGACCATAA

Protein sequence

MVIVKRVGERGGGGGVVEGCGIHGGRRWRVKGGGEEVWKWNIDKFKNFESEIMCEIWRSRVATVLRASDDLLFHSGP
Homology
The following BLAST results are available for this feature:
BLAST of Cmc12g0325341.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc12g0325341.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc12g0325341.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc12g0325341.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc12g0325341Cmc12g0325341gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0325341.1-exonCmc12g0325341.1-exon-CMiso1.1chr12:15493201..15495018exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0325341.1-five_prime_utrCmc12g0325341.1-five_prime_utr-CMiso1.1chr12:15493201..15494070five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0325341.1-cdsCmc12g0325341.1-cds-CMiso1.1chr12:15494071..15494304CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc12g0325341.1-three_prime_utrCmc12g0325341.1-three_prime_utr-CMiso1.1chr12:15494305..15495018three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc12g0325341.1Cmc12g0325341.1-proteinpolypeptide