Cmc12g0324631.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc12g0324631.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr12: 14342772 .. 14344387 (-)
Sequence length	1542
RNA-Seq Expression	Cmc12g0324631.1
Synteny	Cmc12g0324631.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGATGACATTTTGATCTACTCCAAAACGGAGGCTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGGTTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCCGCAAAGATCGAAACGGTTACCAATTGGCCTCGACCATCTACAGTTGACGAGATTCGTAGTTTCTTGGTCTTGGTAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGGGTAGCTTCCAGGAGCTTAAGCAGAAGCTAGTGGCTGCACCAGTCCTGACAGTGTCCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACTCACGATTTAGAGTTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCGTAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGCTGAACATGAAGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATAACTGTGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGCTGACGCACTGAGTAGAAAGGTTGCACATTCAACAGCACTGATCACCAAGCAAGCCCCCTTACTTAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGTTTAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTGCGCTCAATTAAATGATCCTTATTTGGTCGAGAAGCGTCGTCTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATTCTCTGACGATGGCCTTACGTTTGAGGGACACTTGTGTGTGTCAGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGAACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAACCGGGTTGTTGCAACCATTGATTGTGCCAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTATGGGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGGCAGACTCACGAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTGAGACTGCATGGAGTGCATGTATCCATCGTTTCGGACAGAGTTGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGCACGAGGTTAGACTTTAGCACAGCTTTTCATCCGTAG

mRNA sequence

ATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGATGACATTTTGATCTACTCCAAAACGGAGGCTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGGTTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCCGCAAAGATCGAAACGGTTACCAATTGGCCTCGACCATCTACAGTTGACGAGATTCGTAGTTTCTTGGTCTTGGTAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGGGTAGCTTCCAGGAGCTTAAGCAGAAGCTAGTGGCTGCACCAGTCCTGACAGTGTCCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACTCACGATTTAGAGTTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCGTAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGCTGAACATGAAGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATAACTGTGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGCTGACGCACTGAGTAGAAAGGTTGCACATTCAACAGCACTGATCACCAAGCAAGCCCCCTTACTTAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGAAGCGTCGTCTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATTCTCTGACGATGGCCTTACGTTTGAGGGACACTTGTGTGTGTCAGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGAACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAACCGGGTTGTTGCAACCATTGATTGTGCCAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTATGGGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGGCAGACTCACGAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTGAGACTGCATGGAGTGCATGTATCCATCGTTTCGGACAGAGTTGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGCACGAGGTTAGACTTTAGCACAGCTTTTCATCCGTAG

Coding sequence (CDS)

ATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGATGACATTTTGATCTACTCCAAAACGGAGGCTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGGTTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCCGCAAAGATCGAAACGGTTACCAATTGGCCTCGACCATCTACAGTTGACGAGATTCGTAGTTTCTTGGTCTTGGTAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGGGTAGCTTCCAGGAGCTTAAGCAGAAGCTAGTGGCTGCACCAGTCCTGACAGTGTCCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACTCACGATTTAGAGTTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCGTAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGCTGAACATGAAGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATAACTGTGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGCTGACGCACTGAGTAGAAAGGTTGCACATTCAACAGCACTGATCACCAAGCAAGCCCCCTTACTTAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGAAGCGTCGTCTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATTCTCTGACGATGGCCTTACGTTTGAGGGACACTTGTGTGTGTCAGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGAACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAACCGGGTTGTTGCAACCATTGATTGTGCCAGGATGGAAATGGGAGAGTGTGTCGATGGACTTCATTATGGGACTGCCCAAGACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGGCAGACTCACGAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTGAGACTGCATGGAGTGCATGTATCCATCGTTTCGGACAGAGTTGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGCACGAGGTTAGACTTTAGCACAGCTTTTCATCCGTAG

Protein sequence

MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKELNMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSVGEVTSQLKRRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP

Homology

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BLAST of Cmc12g0324631.1 vs. NCBI nr
Match: KAA0042391.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15510.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 998.8 bits (2581), Expect = 1.7e-287
Identity = 497/513 (96.88%), Postives = 499/513 (97.27%), Query Frame = 0


Query: 1   MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
           MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV
Sbjct: 479 MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 538

Query: 61  SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
           SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVD+IRSFLVLVGYYRRFVEDFSRIASPLTQ
Sbjct: 539 SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDKIRSFLVLVGYYRRFVEDFSRIASPLTQ 598

Query: 121 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
           LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK
Sbjct: 599 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 658

Query: 181 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
           VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL
Sbjct: 659 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 718

Query: 241 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
           NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV
Sbjct: 719 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 778

Query: 301 SVGEVTSQLKRRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMH 360
           SVGE      RRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMH
Sbjct: 779 SVGE------RRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMH 838

Query: 361 PGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESV 420
           PGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESV
Sbjct: 839 PGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESV 898

Query: 421 SMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVS 480
           SMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVS
Sbjct: 899 SMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVS 958

Query: 481 IVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
           IVSDRVARFTSKFWKGLQLALGT    +    P
Sbjct: 959 IVSDRVARFTSKFWKGLQLALGTSYQATIGMAP 985

[Close]

BLAST of Cmc12g0324631.1 vs. NCBI nr
Match: KAA0035890.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 952.6 bits (2461), Expect = 1.4e-273
Identity = 476/538 (88.48%), Postives = 487/538 (90.52%), Query Frame = 0


Query: 1   MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
           MNRVFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 266 MNRVFKDFLDSFVIVFIDDILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 325

Query: 61  SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
           +FLGHVVSSEGVSVDPAKIE VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 326 AFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 385

Query: 121 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
           LTRKGTPFVWSPACE SFQELKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGK
Sbjct: 386 LTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 445

Query: 181 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
           VVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 446 VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 505

Query: 241 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
           NM+QRRWLELVKDY+CEILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAV
Sbjct: 506 NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV 565

Query: 301 SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
           SVGEVT+QL                         KRR+VETGQGEDFSI SDDGL FEG 
Sbjct: 566 SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGR 625

Query: 361 LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
           LCV EDSAVK ELLTEAHSSPFTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 626 LCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 685

Query: 421 VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
           VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKTLKGYTVIWVVV RLTKSAHFVPGK
Sbjct: 686 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 745

Query: 481 STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
           STYTASKWGQLYMTEIVRLHGV VSI+SDR ARFTSKFWKGLQLALGTRLDFST FHP
Sbjct: 746 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHP 803

[Close]

BLAST of Cmc12g0324631.1 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 952.2 bits (2460), Expect = 1.8e-273
Identity = 476/538 (88.48%), Postives = 488/538 (90.71%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 728  MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 787

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
            +FLGHVVSSEGVSVDPAKIE VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 788  TFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 847

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            LTRKGTPFVWSPACE SFQELKQKLV APVLTV DGSG+FVIYSDASKK LGCVLMQQGK
Sbjct: 848  LTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKELGCVLMQQGK 907

Query: 181  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
            VVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 908  VVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 967

Query: 241  NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
            NM+QRRWLELVKDY+CEILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEI V
Sbjct: 968  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEITV 1027

Query: 301  SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
            SVGEVT+QL                         KRR+VETGQGEDFSI SDDGL FEG 
Sbjct: 1028 SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGR 1087

Query: 361  LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
            LCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 1088 LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 1147

Query: 421  VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
            VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKT KGYTVIWVVV RLTKSAHFVPGK
Sbjct: 1148 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKSAHFVPGK 1207

Query: 481  STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            STYTASKWGQLYMTEIVRLHGV VSI+SDR ARFTSKFWKGLQLALGTRLDFSTAFHP
Sbjct: 1208 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP 1265

[Close]

BLAST of Cmc12g0324631.1 vs. NCBI nr
Match: KAA0056636.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 950.3 bits (2455), Expect = 6.9e-273
Identity = 477/538 (88.66%), Postives = 488/538 (90.71%), Query Frame = 0


Query: 1   MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
           MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 88  MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 147

Query: 61  SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
           +FLGHVVSSEGVSVDPAK E VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 148 TFLGHVVSSEGVSVDPAKTEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 207

Query: 121 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
           LTRKGTPFVWSPACE SFQ+LKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGK
Sbjct: 208 LTRKGTPFVWSPACESSFQKLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 267

Query: 181 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
           VVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 268 VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 327

Query: 241 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
           NM+QRRWLELVKDY+ EILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAV
Sbjct: 328 NMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV 387

Query: 301 SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
           SVGEVT+QL                         KRR+VETGQGEDFSI SDDGL FEG 
Sbjct: 388 SVGEVTAQLAQFSVQPTLRQKIIATQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGR 447

Query: 361 LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
           LCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 448 LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 507

Query: 421 VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
           VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKTLKGYTVIWVVV RLTKSAHFVPGK
Sbjct: 508 VKAPRQCPVGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 567

Query: 481 STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
           STYTASKWGQLYMTEIVRLHGV VSIVSDR ARFTSKFWKGLQLALGTRLDFSTAFHP
Sbjct: 568 STYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTAFHP 625

[Close]

BLAST of Cmc12g0324631.1 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 949.5 bits (2453), Expect = 1.2e-272
Identity = 476/538 (88.48%), Postives = 487/538 (90.52%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 700  MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 759

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
            +FLGHVVSSEGVSVDPAKIE VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 760  TFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 819

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            LTRKGTPFVWSPACE SFQELKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGK
Sbjct: 820  LTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 879

Query: 181  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
            VVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 880  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 939

Query: 241  NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
            NM+QRRWLELVKDY+CEILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAV
Sbjct: 940  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV 999

Query: 301  SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
            SVGEVT+QL                         KRR+VETGQGEDFSI  DDGL FEG 
Sbjct: 1000 SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISFDDGLMFEGR 1059

Query: 361  LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
            LCV EDSAVKTELLTEAHSS FTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 1060 LCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 1119

Query: 421  VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
            VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKTLKGYTVIWVVV RLTKSAHFVPGK
Sbjct: 1120 VKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 1179

Query: 481  STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            STYTASKWGQLYMTEIVRLHGV VSI+SDR ARFTSKFWKGLQLALGTRLDFST FHP
Sbjct: 1180 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHP 1237

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-68
Identity = 160/534 (29.96%), Postives = 268/534 (50.19%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
             F+G+ +S +G +     I+ V  W +P    E+R FL  V Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 181  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDRKSLKY 240
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TD ++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 241  FFTQKE--LNMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTAL--------- 300
              T +    N +  RW   ++D+N EI Y PG AN +ADALSR V  +  +         
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSI 848

Query: 301  -ITKQAPLLRDFERAEIAVSVGEVTSQLKRRLVETGQGEDFSIFSDDGLTF--EGHLCVS 360
                Q  +  DF+   +     +  ++L   L    +  + +I   DGL    +  + + 
Sbjct: 849  NFVNQISITDDFKNQVVTEYTND--TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 908

Query: 361  EDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAP 420
             D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ  K+ 
Sbjct: 909  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 968

Query: 421  RQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYT 480
              +P G LQP+      WES+SMDFI  LP++  GY  ++VVV R +K A  VP   + T
Sbjct: 969  NHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSIT 1028

Query: 481  ASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            A +  +++   ++   G    I++D    FTS+ WK         + FS  + P
Sbjct: 1029 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRP 1079

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-68
Identity = 160/534 (29.96%), Postives = 268/534 (50.19%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
             F+G+ +S +G +     I+ V  W +P    E+R FL  V Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 181  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDRKSLKY 240
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TD ++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 241  FFTQKE--LNMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTAL--------- 300
              T +    N +  RW   ++D+N EI Y PG AN +ADALSR V  +  +         
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSI 848

Query: 301  -ITKQAPLLRDFERAEIAVSVGEVTSQLKRRLVETGQGEDFSIFSDDGLTF--EGHLCVS 360
                Q  +  DF+   +     +  ++L   L    +  + +I   DGL    +  + + 
Sbjct: 849  NFVNQISITDDFKNQVVTEYTND--TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 908

Query: 361  EDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAP 420
             D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ  K+ 
Sbjct: 909  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 968

Query: 421  RQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYT 480
              +P G LQP+      WES+SMDFI  LP++  GY  ++VVV R +K A  VP   + T
Sbjct: 969  NHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSIT 1028

Query: 481  ASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            A +  +++   ++   G    I++D    FTS+ WK         + FS  + P
Sbjct: 1029 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRP 1079

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-68
Identity = 160/534 (29.96%), Postives = 268/534 (50.19%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
             F+G+ +S +G +     I+ V  W +P    E+R FL  V Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 181  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDRKSLKY 240
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TD ++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 241  FFTQKE--LNMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTAL--------- 300
              T +    N +  RW   ++D+N EI Y PG AN +ADALSR V  +  +         
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSI 848

Query: 301  -ITKQAPLLRDFERAEIAVSVGEVTSQLKRRLVETGQGEDFSIFSDDGLTF--EGHLCVS 360
                Q  +  DF+   +     +  ++L   L    +  + +I   DGL    +  + + 
Sbjct: 849  NFVNQISITDDFKNQVVTEYTND--TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 908

Query: 361  EDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAP 420
             D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ  K+ 
Sbjct: 909  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 968

Query: 421  RQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYT 480
              +P G LQP+      WES+SMDFI  LP++  GY  ++VVV R +K A  VP   + T
Sbjct: 969  NHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSIT 1028

Query: 481  ASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            A +  +++   ++   G    I++D    FTS+ WK         + FS  + P
Sbjct: 1029 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRP 1079

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-68
Identity = 160/534 (29.96%), Postives = 268/534 (50.19%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
             F+G+ +S +G +     I+ V  W +P    E+R FL  V Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 181  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDRKSLKY 240
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TD ++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 241  FFTQKE--LNMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTAL--------- 300
              T +    N +  RW   ++D+N EI Y PG AN +ADALSR V  +  +         
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSI 848

Query: 301  -ITKQAPLLRDFERAEIAVSVGEVTSQLKRRLVETGQGEDFSIFSDDGLTF--EGHLCVS 360
                Q  +  DF+   +     +  ++L   L    +  + +I   DGL    +  + + 
Sbjct: 849  NFVNQISITDDFKNQVVTEYTND--TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 908

Query: 361  EDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAP 420
             D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ  K+ 
Sbjct: 909  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 968

Query: 421  RQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYT 480
              +P G LQP+      WES+SMDFI  LP++  GY  ++VVV R +K A  VP   + T
Sbjct: 969  NHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSIT 1028

Query: 481  ASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            A +  +++   ++   G    I++D    FTS+ WK         + FS  + P
Sbjct: 1029 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRP 1079

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-68
Identity = 160/534 (29.96%), Postives = 268/534 (50.19%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549  INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
             F+G+ +S +G +     I+ V  W +P    E+R FL  V Y R+F+   S++  PL  
Sbjct: 609  KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            L +K   + W+P    + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669  LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 181  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDRKSLKY 240
                  V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TD ++L  
Sbjct: 729  DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG 788

Query: 241  FFTQKE--LNMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTAL--------- 300
              T +    N +  RW   ++D+N EI Y PG AN +ADALSR V  +  +         
Sbjct: 789  RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSI 848

Query: 301  -ITKQAPLLRDFERAEIAVSVGEVTSQLKRRLVETGQGEDFSIFSDDGLTF--EGHLCVS 360
                Q  +  DF+   +     +  ++L   L    +  + +I   DGL    +  + + 
Sbjct: 849  NFVNQISITDDFKNQVVTEYTND--TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 908

Query: 361  EDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAP 420
             D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ  K+ 
Sbjct: 909  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 968

Query: 421  RQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYT 480
              +P G LQP+      WES+SMDFI  LP++  GY  ++VVV R +K A  VP   + T
Sbjct: 969  NHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSIT 1028

Query: 481  ASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            A +  +++   ++   G    I++D    FTS+ WK         + FS  + P
Sbjct: 1029 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRP 1079

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy TrEMBL
Match: A0A5D3CVW4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G001030 PE=4 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 8.2e-288
Identity = 497/513 (96.88%), Postives = 499/513 (97.27%), Query Frame = 0


Query: 1   MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
           MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV
Sbjct: 479 MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 538

Query: 61  SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
           SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVD+IRSFLVLVGYYRRFVEDFSRIASPLTQ
Sbjct: 539 SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDKIRSFLVLVGYYRRFVEDFSRIASPLTQ 598

Query: 121 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
           LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK
Sbjct: 599 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 658

Query: 181 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
           VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL
Sbjct: 659 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 718

Query: 241 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
           NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV
Sbjct: 719 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 778

Query: 301 SVGEVTSQLKRRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMH 360
           SVGE      RRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMH
Sbjct: 779 SVGE------RRLVETGQGEDFSIFSDDGLTFEGHLCVSEDSAVKTELLTEAHSSPFTMH 838

Query: 361 PGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESV 420
           PGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESV
Sbjct: 839 PGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPTGLLQPLIVPGWKWESV 898

Query: 421 SMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVS 480
           SMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVS
Sbjct: 899 SMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVHVS 958

Query: 481 IVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
           IVSDRVARFTSKFWKGLQLALGT    +    P
Sbjct: 959 IVSDRVARFTSKFWKGLQLALGTSYQATIGMAP 985

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy TrEMBL
Match: A0A5A7SXW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00560 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 6.8e-274
Identity = 476/538 (88.48%), Postives = 487/538 (90.52%), Query Frame = 0


Query: 1   MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
           MNRVFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 266 MNRVFKDFLDSFVIVFIDDILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 325

Query: 61  SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
           +FLGHVVSSEGVSVDPAKIE VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 326 AFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 385

Query: 121 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
           LTRKGTPFVWSPACE SFQELKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGK
Sbjct: 386 LTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 445

Query: 181 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
           VVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 446 VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 505

Query: 241 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
           NM+QRRWLELVKDY+CEILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAV
Sbjct: 506 NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV 565

Query: 301 SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
           SVGEVT+QL                         KRR+VETGQGEDFSI SDDGL FEG 
Sbjct: 566 SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGR 625

Query: 361 LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
           LCV EDSAVK ELLTEAHSSPFTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 626 LCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 685

Query: 421 VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
           VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKTLKGYTVIWVVV RLTKSAHFVPGK
Sbjct: 686 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 745

Query: 481 STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
           STYTASKWGQLYMTEIVRLHGV VSI+SDR ARFTSKFWKGLQLALGTRLDFST FHP
Sbjct: 746 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHP 803

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 8.8e-274
Identity = 476/538 (88.48%), Postives = 488/538 (90.71%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 728  MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 787

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
            +FLGHVVSSEGVSVDPAKIE VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 788  TFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 847

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            LTRKGTPFVWSPACE SFQELKQKLV APVLTV DGSG+FVIYSDASKK LGCVLMQQGK
Sbjct: 848  LTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKELGCVLMQQGK 907

Query: 181  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
            VVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 908  VVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 967

Query: 241  NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
            NM+QRRWLELVKDY+CEILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEI V
Sbjct: 968  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEITV 1027

Query: 301  SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
            SVGEVT+QL                         KRR+VETGQGEDFSI SDDGL FEG 
Sbjct: 1028 SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGR 1087

Query: 361  LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
            LCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 1088 LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 1147

Query: 421  VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
            VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKT KGYTVIWVVV RLTKSAHFVPGK
Sbjct: 1148 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKSAHFVPGK 1207

Query: 481  STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            STYTASKWGQLYMTEIVRLHGV VSI+SDR ARFTSKFWKGLQLALGTRLDFSTAFHP
Sbjct: 1208 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP 1265

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy TrEMBL
Match: A0A5A7UQP9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001570 PE=4 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 3.4e-273
Identity = 477/538 (88.66%), Postives = 488/538 (90.71%), Query Frame = 0


Query: 1   MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
           MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 88  MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 147

Query: 61  SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
           +FLGHVVSSEGVSVDPAK E VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 148 TFLGHVVSSEGVSVDPAKTEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 207

Query: 121 LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
           LTRKGTPFVWSPACE SFQ+LKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGK
Sbjct: 208 LTRKGTPFVWSPACESSFQKLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 267

Query: 181 VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
           VVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 268 VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 327

Query: 241 NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
           NM+QRRWLELVKDY+ EILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAV
Sbjct: 328 NMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV 387

Query: 301 SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
           SVGEVT+QL                         KRR+VETGQGEDFSI SDDGL FEG 
Sbjct: 388 SVGEVTAQLAQFSVQPTLRQKIIATQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGR 447

Query: 361 LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
           LCV EDSAVKTELLTEAHSSPFTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 448 LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 507

Query: 421 VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
           VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKTLKGYTVIWVVV RLTKSAHFVPGK
Sbjct: 508 VKAPRQCPVGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 567

Query: 481 STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
           STYTASKWGQLYMTEIVRLHGV VSIVSDR ARFTSKFWKGLQLALGTRLDFSTAFHP
Sbjct: 568 STYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTAFHP 625

[Close]

BLAST of Cmc12g0324631.1 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 949.5 bits (2453), Expect = 5.7e-273
Identity = 476/538 (88.48%), Postives = 487/538 (90.52%), Query Frame = 0


Query: 1    MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSKCEFWLKKV 60
            MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFSKCEFWL+KV
Sbjct: 700  MNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 759

Query: 61   SFLGHVVSSEGVSVDPAKIETVTNWPRPSTVDEIRSFLVLVGYYRRFVEDFSRIASPLTQ 120
            +FLGHVVSSEGVSVDPAKIE VTNWPRPSTV EIRSFL L GYYRRFVEDFSRIASPLTQ
Sbjct: 760  TFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 819

Query: 121  LTRKGTPFVWSPACEGSFQELKQKLVAAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGK 180
            LTRKGTPFVWSPACE SFQELKQKLV APVLTV DGSG+FVIYSDASKKGLGCVLMQQGK
Sbjct: 820  LTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 879

Query: 181  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDRKSLKYFFTQKEL 240
            VVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TD KSLKYFFTQKEL
Sbjct: 880  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 939

Query: 241  NMKQRRWLELVKDYNCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAV 300
            NM+QRRWLELVKDY+CEILYHPGKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAV
Sbjct: 940  NMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV 999

Query: 301  SVGEVTSQL-------------------------KRRLVETGQGEDFSIFSDDGLTFEGH 360
            SVGEVT+QL                         KRR+VETGQGEDFSI  DDGL FEG 
Sbjct: 1000 SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISFDDGLMFEGR 1059

Query: 361  LCVSEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVADFVSRCLVCQQ 420
            LCV EDSAVKTELLTEAHSS FTMHPGSTKMYQ+LRSVYWWR MKREVADFVSRCLVCQQ
Sbjct: 1060 LCVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQ 1119

Query: 421  VKAPRQRPTGLLQPLIVPGWKWESVSMDFIMGLPKTLKGYTVIWVVVGRLTKSAHFVPGK 480
            VKAPRQ P GLLQPL VPGWKWESVSMDFI GLPKTLKGYTVIWVVV RLTKSAHFVPGK
Sbjct: 1120 VKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 1179

Query: 481  STYTASKWGQLYMTEIVRLHGVHVSIVSDRVARFTSKFWKGLQLALGTRLDFSTAFHP 514
            STYTASKWGQLYMTEIVRLHGV VSI+SDR ARFTSKFWKGLQLALGTRLDFST FHP
Sbjct: 1180 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHP 1237

[Close]

BLAST of Cmc12g0324631.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-23
Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 33  HLHQVLETLRANRLYAKFSKCEFWLKKVSFLG--HVVSSEGVSVDPAKIETVTNWPRPST 92
           HL  VL+    ++ YA   KC F   ++++LG  H++S EGVS DPAK+E +  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 93  VDEIRSFLVLVGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACEGSFQELKQKLVAAPV 152
             E+R FL L GYYRRFV+++ +I  PLT+L +K +   W+     +F+ LK  +   PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 153 LTVSDGSGSFV 162
           L + D    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc12g0324631.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042391.1	1.7e-287	96.88	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15510.1 ty3-gyp...	[more]
KAA0035890.1	1.4e-273	88.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	1.8e-273	88.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056636.1	6.9e-273	88.66	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	1.2e-272	88.48	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0324631.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	3.3e-68	29.96	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.3e-68	29.96	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.3e-68	29.96	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.3e-68	29.96	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	3.3e-68	29.96	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc12g0324631.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVW4	8.2e-288	96.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold47...	[more]
A0A5A7SXW6	6.8e-274	88.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56...	[more]
A0A5A7V646	8.8e-274	88.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7UQP9	3.4e-273	88.66	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001570 P...	[more]
A0A5A7V4E4	5.7e-273	88.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]

BLAST of Cmc12g0324631.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.0e-23	40.46	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 160..225 e-value: 8.2E-9 score: 37.3
None	No IPR available	GENE3D	1.10.340.70		coord: 316..397 e-value: 8.0E-17 score: 63.3
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 77..275
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 77..275
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 161..276 e-value: 1.66343E-56 score: 182.692
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..67 e-value: 7.86019E-29 score: 110.378
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 407..513 e-value: 1.9E-15 score: 58.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 77..159 e-value: 8.8E-29 score: 101.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..72 e-value: 4.4E-26 score: 93.3
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 343..398 e-value: 2.7E-17 score: 62.6
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 158..254 e-value: 7.9E-33 score: 112.9
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..66 e-value: 3.4E-10 score: 39.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 409..513 score: 8.841592
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 409..513
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..260

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc12g0324631	Cmc12g0324631	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc12g0324631.1-exon	Cmc12g0324631.1-exon-CMiso1.1chr12:14342772..14343386	exon
Cmc12g0324631.1-exon	Cmc12g0324631.1-exon-CMiso1.1chr12:14343461..14344387	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc12g0324631.1-cds	Cmc12g0324631.1-cds-CMiso1.1chr12:14342772..14343386	CDS
Cmc12g0324631.1-cds	Cmc12g0324631.1-cds-CMiso1.1chr12:14343461..14344387	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc12g0324631.1	Cmc12g0324631.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding