Cmc12g0322641.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc12g0322641.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr12: 10817474 .. 10821029 (+)
Sequence length	617
RNA-Seq Expression	Cmc12g0322641.1
Synteny	Cmc12g0322641.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCACGCTCTTCCTTTCCTTTCCTTCAAACGCGAACAACCATTTGCTTACCTCAAACCCTCACACAACGCCGCTCCATTTCCTTCAAACACCGTCAGCCATTGGACGCAAGAACTCCACCCTCAACCTCGTCTGCAAACGCCGTCGACCATCTCCATTTGATATTAGAGGTCCAACTCCACCCTCAAGGACTCCAAATGCCAGCCATCAGAGGATCTTCGCATTCCGCTGGCCATTCAAGGATCCAATTGGCTACCCATCTGTAGTGTTCCTCGCTCGTCGTAGTCAGTGTTTCGTCAGGTTAGGTTTTTCTTCATTTTTCGGTTCTTTAGTTTTTTCCTCCCTGTTACAGTATGCATTGAAATACTTGCTTTCATTCATTTTGTTTTGTTTTAGATCTAAATTGGATTGGTTCATACATTTTCTGATAGATAAATTTTAAGTTCAAACGTTGGAAGTGTTCTCAATTATAGAAGAAAAGATATTTCTTCAATTTGAAATTTGGTGCATTTGTATTTTACGAACTGTGGGAAAAGTTTATACTGTTCTTGGTTAGATTCTCAAGGCTATTATGAAATGGAACCAGATGTAGCTCTCTTAGTTGCATCAATAATTTCTATATTTTCTTCTTTAAAAAAATGTAAATACCTCCAAGGGTTTACCAAGTCGTTTTTATTTTGATAATTATGACATTGGTGGTCTTAATAGTCAATCAACCATGATACTCATTGCCATTCTAGGAGTTGTTGTGCCTAGATGTTGTTTCAAAATAAAATTCTATTCATTAGGTGAACCGAATTTGTAAAATATTTACATTAATGGGAAGATATAAACTGCTCTTTGAGTGTTGTGTTTGCAAAATTCTGAATATGAAGTATTCTTCTAAATTAGGCTTCCAGTTTAATTTGAAATTTTAAACTTGTGAGAGTCTCACAGTAGTTATGGTAGATTATTTCAGTTTTAGATTAATTACCAGATTCTCTTTTAAATATCATATCAGGTTGGCGGTCTCATTGCAATGTTGGTATTTTTCTACTTCTTATCACAAGGGTGGGCCATGGCCACACATTTTCCTTCTATATCCTTTGAAAGTTCAATTGGAACTGTATTTTCATGTATGAAAGCAAGTGGCTGTAATTATTTGTTGCGATCTTTAGGTTCTTTTTCTTTTTTTCTTACTTCAAAGGGTCCTCTACTTCTCCTTCTCTTTCACATTATGTCGATGATTATGATATTGTATTTGAAGTTAGTTTGAGTAGTGTGGAATCTATCATTATTGATAACACTTGTGCAAAGGATTCTTTTGGTGATGGTGTTACTTCAAGAAAGTGATAAAAAAATTCCTCATTCTCTTCTTTCATTAGAGCCTTGCAAATTTGTGTCTCTTTGAAGCTTGGGGTCTCGAAACGAAATTCTGTAAGGCAATTTTTGTTGATGTTTGATTGTTCTATTGAGTTTACAGTTTGGGTTCAATGATTCCCACTTGATGATTTGATGCTCATTTTTGCTTTTCTCCCTGATGGTTTTACATTTCCTATTACGTTGAGATTCATATCTTTTATTATTATTTTTTTATTTTTGTTATTTTATGTCCAAAGCCTTGCTTCTGAGGTGTTTTCTTTTACTTGGTTTTCAAAGTACTTTTTATGTGGAGATTAATCTTTTATACTCACTCTCTTTGTTAGATTCTTTTTTTTTTAGTTTGCAAGTGTTTTTCCACAGTGGAAGTTTCTATTGTATATTTTTTTTCTTCCTTTGTTGTGGTTAACTTTTGTAAAACATTTACAATTTTGTACGGTGTACACTGATAGGTAAGAGGAGTGTTGTGTTTGTATTTGATAAGTCCAAACTGAAATTTAGAAATTTCTAAACAAAATAACACAAGTATCTATATTTGACCCATATGATGCAAATACTAAGAAGCTTGGAAGAGGATTCATGACTCATGAGATGTTCTTTTGACATATTTACTTGCTTCTTTTTAAAATAATTATGAGGGTTTATTAAGAACTTTGAAAAGGAGGAGTTGTTTCACTTATACATCTTTTTCTTTTTCTTTTTATTGATCAGATTTTCTATTCACTATCTTGTTACTCTCTTTGGCATTTGCTTTGTACTGTGGCCTTTGTTTCACTTCTAGATATTATTTCCACTCAATTCCATCTCTCTTGGAAAATCCATCATTTTATAAAGTGATCAAATTAAATCTTTTGTGTTCATCTAGGTTAAATAATTATCTTATCCCTTAATTTTGGTTAAATGTACTAGACTATTTATGTGATCATGTATTTGTATGTTTTTTGTTTTTTGGCCACTCATCTCAAGTTCTTAATTGGCTATTGTGTCCTTGTTTGTGTTATATCTGTTGAAAAGTTATTATCATATTTTGTTTCTAATGCCATATTCAATAATTTTTTGTGTCATTGTTCATATTTTCTCTTTCGTTAGATGCGTGTAGTAATGACACAAAGATCTACAAAATTGGAAAGATGGGGCTGCAATCGCATACTTCTTTCAATGAATTTGATAGGTTAGTTTGTTACATGAGTTGAATAGTTATGTTGTTTTAGATGAGTGAAACGTAAATGCAAACAAGTCTTGTATAGGTGGTGATCCCTTCGGATCTGAATTTTTTTCGCTTTTAGTTACAAGGAACTTGGCAAATTAATGGTATCATAGTTCTAGATGATACTACTTATGTTGTAAGTCTCTTTATTTGATTAAAAGAGAGTGGAAAATAAGAGGATTTTGAGCAATTGTAATGTTCATCTTGATAGAATGTCAGTAAAAACTTTAAATATTTGTATATAAATGGAGTTTTTGTTGGAAGAAGAATGCATTGGACTCTATGTCTGCTTTGTTATCTTGTCAAGAATTGAAACTTCATATCTTCCATTTATCTTTACCTATTTCTCTTTGAAATTCTGTGATGTTGGGATTTCTTATGGATCTAAATGAATTGCCTTGATGATTGATTCAATGGTTTGCATTTCAAACAATATGTTTATGCTTGGAATGTGTGAAGAAGCTAAGGTTTATAGAGTTTGAGCCCACTTTGGAATTGTGTTGTTGGATAGAAAAACAGATTCATATAGTGGTTAGAAGTGGTTGATCTCCTTGATATTAGTTTAAATGACTTCAAAGTTATATATATCTATATATATATATATTATTGGGGATATATTGAGATATGTTATGAACTAATAATTGGGTGAAGTAGATTCAATTTATCTCTCCTTTTAACTAGGACTGTAATTGGTACCTTATGTTGGCATTACAAAGGGTTATATTCTTATATTGATGTGTAGAGTCATACTCTAAAATTTCATTTTGTTTTCTTACTAGGTTTTGCAATAATCCATTGGAGTAGTGAAGCCATATTGGAGAAAATAATTCATTTATGGGCCTTTTTGTAAGTTTGGTAGCAAAATTTTGGTTGAAATGTACTTATTTAAAGAGCTTGTTGGTACCAAAACATGTATGTTCATTCTATCATTGTACAAATATTACAAAGTGTATGTTAACGTATATATATTAAAGCATTGACGGTTTGTT

mRNA sequence

CCCTCACGCTCTTCCTTTCCTTTCCTTCAAACGCGAACAACCATTTGCTTACCTCAAACCCTCACACAACGCCGCTCCATTTCCTTCAAACACCGTCAGCCATTGGACGCAAGAACTCCACCCTCAACCTCGTCTGCAAACGCCGTCGACCATCTCCATTTGATATTAGAGGTCCAACTCCACCCTCAAGGACTCCAAATGCCAGCCATCAGAGGATCTTCGCATTCCGCTGGCCATTCAAGGATCCAATTGGCTACCCATCTGTAGTGTTCCTCGCTCGTCGTAGTCAGTGTTTCGTCAGGTTGGCGGTCTCATTGCAATGTTGATGCGTGTAGTAATGACACAAAGATCTACAAAATTGGAAAGATGGGGCTGCAATCGCATACTTCTTTCAATGAATTTGATAGGTTTTGCAATAATCCATTGGAGTAGTGAAGCCATATTGGAGAAAATAATTCATTTATGGGCCTTTTTGTAAGTTTGGTAGCAAAATTTTGGTTGAAATGTACTTATTTAAAGAGCTTGTTGGTACCAAAACATGTATGTTCATTCTATCATTGTACAAATATTACAAAGTGTATGTTAACGTATATATATTAAAGCATTGACGGTTTGTT

Coding sequence (CDS)

ATGTTGATGCGTGTAGTAATGACACAAAGATCTACAAAATTGGAAAGATGGGGCTGCAATCGCATACTTCTTTCAATGAATTTGATAGGTTTTGCAATAATCCATTGGAGTAGTGAAGCCATATTGGAGAAAATAATTCATTTATGGGCCTTTTTGTAA

Protein sequence

MLMRVVMTQRSTKLERWGCNRILLSMNLIGFAIIHWSSEAILEKIIHLWAFL

Homology

The following BLAST results are available for this feature:

BLAST of Cmc12g0322641.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc12g0322641.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc12g0322641.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc12g0322641.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc12g0322641	Cmc12g0322641	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc12g0322641.1-exon	Cmc12g0322641.1-exon-CMiso1.1chr12:10817474..10817774	exon
Cmc12g0322641.1-exon	Cmc12g0322641.1-exon-CMiso1.1chr12:10818475..10818498	exon
Cmc12g0322641.1-exon	Cmc12g0322641.1-exon-CMiso1.1chr12:10819923..10820004	exon
Cmc12g0322641.1-exon	Cmc12g0322641.1-exon-CMiso1.1chr12:10820820..10821029	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc12g0322641.1-five_prime_utr	Cmc12g0322641.1-five_prime_utr-CMiso1.1chr12:10817474..10817774	five_prime_UTR
Cmc12g0322641.1-five_prime_utr	Cmc12g0322641.1-five_prime_utr-CMiso1.1chr12:10818475..10818492	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc12g0322641.1-cds	Cmc12g0322641.1-cds-CMiso1.1chr12:10818493..10818498	CDS
Cmc12g0322641.1-cds	Cmc12g0322641.1-cds-CMiso1.1chr12:10819923..10820004	CDS
Cmc12g0322641.1-cds	Cmc12g0322641.1-cds-CMiso1.1chr12:10820820..10820890	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc12g0322641.1-three_prime_utr	Cmc12g0322641.1-three_prime_utr-CMiso1.1chr12:10820891..10821029	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc12g0322641.1	Cmc12g0322641.1-protein	polypeptide