Cmc11g0308751.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0308751.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 29675721 .. 29677240 (+)
Sequence length	1520
RNA-Seq Expression	Cmc11g0308751.1
Synteny	Cmc11g0308751.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACAAACACAATAATAATTTTAAAATTCAACAATTCTCAAAACATAATATTACATTTAACAAAAATAATAATATACAAAAGTAGAGAACGTGGCTTGCAGGTAATAGGAGCGGCGGCCACGTGACAAACTGATGCAATTACCTCACCACTCTCTACATATATTTTGTACAACCAAAGACTTGGTTTTCGGAAAACGACGTATCGGTTTCTCATTACAGCCGTTGAATACGCACTTTTTCCGGCTCCCATCCATCACCTTCTGTCTCTCCTCCGATTTGTCGTTTTTCATATATATATATATATATATATATATTTTTTTTTTTTTTACCAATTCCCTCGCACTTGCCGTTAGTACCGTTTGATTTGTATGGGCCCAAAGCCCATTTCCAAGCTAATGCACGGTCCTAGACGTGGGCAGATTTAGATGAGGACACGTGGCTTGTTTGACGTAAGGTTTGGATTGGATCCACCGGCAACCGTTGGATTGAAAGGGTAGAAAGGAAAATTAAATGAGAAGATACTCAGAATCTTCCACTCAACGGATCTTTACACACCGACAGTTAATTGAGCTGTTTAATCAAAAGCTTGGAAAGAATAAGGAAAAAAGAAAAAGTAATAATGCCTTCTTGATCTTATCATTAGGGGGCAACGTTAAACTAACATTTTAAAATAAGTTCAACTCGGTATATTAATGATATCATATGACTATTGCATAAATTTTTTTTTTTTATTTTTGTAAATGCTTCATTTTTCATTTTATAAATAAATAAATTTTAACTATGAAGTTGATAGACCAAACACGTGCTTGTGACTTGAAGATTTGTGAACGAACTGCTTTTTTATGGATAATTTGAAATATGATGTTGAATGGATTGTCTTTTTTTTTTTTTAAAAAAAAAAAGATTTTCAATTTCAATGTTGATCAAGAAAACACTTTTTTGTTTGTTGTTTTTTAATGTTTTAAGTTCATAATAAGACTACACATTTATTCCTACTTTTCTTTCATATAAAATAACAATATATATTCCCTATTGTAAGGGGTTGTGCTTTAGAAGTGTGACTAAAAAAGCATACACATCTTTTAAGCTTCAAAAAAGTATGTTCTTTTTCAACACAACTTTAGTACAATTAACAACTAAGAAAAAGCATTTACATCATAATTATAAGATGGAATATTCAAATCACAGGCTTTCTTTTTCTTTTTTTTTTAATTTAAAATAAAAATCTTTCAAATCTACGATAGTTATAAAGTTGGAGAAATACATATATTTGAGTCATCTAGTTTTAGAATTAAAAGTGATATAGCTACAACTACCCGGTACTCTTATTAGTAGTTTTTACAATGTCTTAATAAAACATGTACAAGGTAAAAAATTAATAGATCTAATCTATCTTAAGTAGATAAAATCTATTTTTAGGATAAATGAACAAGAGGTTTTCAAATATAAGAAAGAAACTAAAACTATTTACACTATAGCAAAATCATTAAATTCCTTTTAGCTTATTTGAGTCATCTAT

mRNA sequence

CAAACAAACACAATAATAATTTTAAAATTCAACAATTCTCAAAACATAATATTACATTTAACAAAAATAATAATATACAAAAGTAGAGAACGTGGCTTGCAGGTAATAGGAGCGGCGGCCACGTGACAAACTGATGCAATTACCTCACCACTCTCTACATATATTTTGTACAACCAAAGACTTGGTTTTCGGAAAACGACGTATCGGTTTCTCATTACAGCCGTTGAATACGCACTTTTTCCGGCTCCCATCCATCACCTTCTGTCTCTCCTCCGATTTGTCGTTTTTCATATATATATATATATATATATATATTTTTTTTTTTTTTACCAATTCCCTCGCACTTGCCGTTAGTACCGTTTGATTTGTATGGGCCCAAAGCCCATTTCCAAGCTAATGCACGGTCCTAGACGTGGGCAGATTTAGATGAGGACACGTGGCTTGTTTGACGTAAGGTTTGGATTGGATCCACCGGCAACCGTTGGATTGAAAGGGTAGAAAGGAAAATTAAATGAGAAGATACTCAGAATCTTCCACTCAACGGATCTTTACACACCGACAGTTAATTGAGCTGTTTAATCAAAAGCTTGGAAAGAATAAGGAAAAAAGAAAAAGTAATAATGCCTTCTTGATCTTATCATTAGGGGGCAACGTTAAACTAACATTTTAAAATAAGTTCAACTCGGTATATTAATGATATCATATGACTATTGCATAAATTTTTTTTTTTTATTTTTGTAAATGCTTCATTTTTCATTTTATAAATAAATAAATTTTAACTATGAAGTTGATAGACCAAACACGTGCTTGTGACTTGAAGATTTGTGAACGAACTGCTTTTTTATGGATAATTTGAAATATGATGTTGAATGGATTGTCTTTTTTTTTTTTTAAAAAAAAAAAGATTTTCAATTTCAATGTTGATCAAGAAAACACTTTTTTGTTTGTTGTTTTTTAATGTTTTAAGTTCATAATAAGACTACACATTTATTCCTACTTTTCTTTCATATAAAATAACAATATATATTCCCTATTGTAAGGGGTTGTGCTTTAGAAGTGTGACTAAAAAAGCATACACATCTTTTAAGCTTCAAAAAAGTATGTTCTTTTTCAACACAACTTTAGTACAATTAACAACTAAGAAAAAGCATTTACATCATAATTATAAGATGGAATATTCAAATCACAGGCTTTCTTTTTCTTTTTTTTTTAATTTAAAATAAAAATCTTTCAAATCTACGATAGTTATAAAGTTGGAGAAATACATATATTTGAGTCATCTAGTTTTAGAATTAAAAGTGATATAGCTACAACTACCCGGTACTCTTATTAGTAGTTTTTACAATGTCTTAATAAAACATGTACAAGGTAAAAAATTAATAGATCTAATCTATCTTAAGTAGATAAAATCTATTTTTAGGATAAATGAACAAGAGGTTTTCAAATATAAGAAAGAAACTAAAACTATTTACACTATAGCAAAATCATTAAATTCCTTTTAGCTTATTTGAGTCATCTAT

Coding sequence (CDS)

ATGCAATTACCTCACCACTCTCTACATATATTTTGTACAACCAAAGACTTGGTTTTCGGAAAACGACGTATCGGTTTCTCATTACAGCCGTTGAATACGCACTTTTTCCGGCTCCCATCCATCACCTTCTGTCTCTCCTCCGATTTGTCGTTTTTCATATATATATATATATATATATATATTTTTTTTTTTTTTACCAATTCCCTCGCACTTGCCGTTAGTACCGTTTGA

Protein sequence

MQLPHHSLHIFCTTKDLVFGKRRIGFSLQPLNTHFFRLPSITFCLSSDLSFFIYIYIYIYIFFFFTNSLALAVSTV

Homology

The following BLAST results are available for this feature:

BLAST of Cmc11g0308751.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0308751.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0308751.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0308751.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0308751	Cmc11g0308751	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308751.1-exon	Cmc11g0308751.1-exon-CMiso1.1chr11:29675721..29677240	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308751.1-five_prime_utr	Cmc11g0308751.1-five_prime_utr-CMiso1.1chr11:29675721..29675853	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308751.1-cds	Cmc11g0308751.1-cds-CMiso1.1chr11:29675854..29676084	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308751.1-three_prime_utr	Cmc11g0308751.1-three_prime_utr-CMiso1.1chr11:29676085..29677240	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308751.1	Cmc11g0308751.1-protein	polypeptide