Cmc11g0308411.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0308411.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	pentatricopeptide repeat-containing protein At4g15720
Location	CMiso1.1chr11: 29433648 .. 29435459 (-)
Sequence length	1812
RNA-Seq Expression	Cmc11g0308411.1
Synteny	Cmc11g0308411.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAACGAAATCTCCATTTTGCCCTCACCAGGCCTTATCTTTCCCGCGAAAACGAACGGCCATTTCTTCAAACCATTGAAAATCTCAGTCTCCATCTTCGGAATTGCAACGATTTGATTTCTTCAATCTTCACTCACTCCATAGCCTTAAAGCTTGGATTCTTAAACAATACTGTCACTGTCAACCATCTCATCAATTGCTATGTCCGGTTCCGCAGTATTGCAACTGCACACCGACTGTTCGATGAAATGCCCAACCCAAATGTTGTGTCGTGGACCTCACTCATGGCTGGTTACGTCGACAACGGCCAGCCGAGTACCGCTCTTTTGCTGTTTGGGGAAATGTTGAGAAGTCCAGTTGTTCCTAATGATTTCACTTTTGCGACTGCGATTAAGGCCTGTTCGATCCTCTCGAATTTAAGATATGGTGAAAGGTTCCATGCCCATGTTGAGATTTTTGGTTATGGATGTAATATTGTGGTTTGTTCTTCTCTTATTGATATGTATGGAAAGTGTAATGATGTTGTTAAAGCTAGGAGTGTCTTTAATTCCATGTCTTGTAAGAATATAGTTTCTTGGACTTCGATGATTGCTGCTTATGCTCAGAATGCTCATGGTGATGAAGCATTAAAAGTGTTTAGGGAATTCACTAGTTTAAGTTCTGAACGTCCAAATCCTTACATGTTAGCTAGTGTGATTAGTGCTTGTGCAAGCCTGGGTAGGCTGGTTTCGGGAAAAGTCGTGCACGGTGCAGCTATTTGTCTTGGCTGTGATTCGAGCGAGGTAGTTGCAAGTGTGTTGGTTGATATGTATGCTAAATGTGGGAGTCTTGATTATTCTGATAACGTTTTTAACAGAATTTCAAACCCTTCTGTTATTCCTTACACTTCGATGATTGTGAGCACAGCAAAGTATGGATTTGGGAGAAAGTCTCTTCAACTCTTTGAAGAAATGGTTAGAAAAGGACTGAAACCTAACCATATCACTCTTCTTGGAGTCTTGCATGCTTGTAGCCATTCAGGGCTCCCTAATGAGGGCCTTTATTATTTGACATCCATGTATGAGAAATATGGGATAATGCCTGAGACTAAGCATTATACATGTGTTGTCGATATGCTAGCTCGATCTGGGGAGCTAGATAAAGCCTTTGACATAGCGAAATCGATGGATGTAGCGCCTGATGACAAGGCATTGTTGTGGGGAGCATTGCTTTCAGCGAGTAGGTGCCATGGCAGGGTAGATATTGCAGCTGAAGCTTGTCAGCAACTCGTGAATTCCAATAGACAAGTTGCTGGTGCATATGTTACTTTGTCGAATGCTTACGCGTCGGCTGGAGATATGGAGAAGGCTCACAAACTCCGAGTTGAGATGAAACATACTGGAGTTCACAAAGAACCAGGATGCAGTTGGATCGAGATAAAAGATTCAAGTTACATATTCTACGCCGGGGAAATAACTTCATGCCCACGAGGCGATGAAGTGTTGTGTTTACTGAGAGAGTTGGACCAGAAAATGAAAGATCGAGGTTACGTAAGAGGAAGGAAAGGATTGGTGTTTGTTGATATAGAAGAAGAGGCAGAAGAGGAAAAGGTTTGGTTGCACAGTGAGAGATTGGCATTGGGATTTGGTTTGATTAGCATTCCAAAAGGACTTACTATAAGAATAATGAAGAACTTGAGAATGTGCAGTGATTGTCATGAGGCTTTCAAGCTTATAAGTGAGATTATGGAGAGAGAATTTGTGGTTAGAGACATTAATAGATTTCATCATTTCCAAAGTGGTTGTTGCACTTGCAATGGTTTCTGGTAA

mRNA sequence

ATGTTGAAACGAAATCTCCATTTTGCCCTCACCAGGCCTTATCTTTCCCGCGAAAACGAACGGCCATTTCTTCAAACCATTGAAAATCTCAGTCTCCATCTTCGGAATTGCAACGATTTGATTTCTTCAATCTTCACTCACTCCATAGCCTTAAAGCTTGGATTCTTAAACAATACTGTCACTGTCAACCATCTCATCAATTGCTATGTCCGGTTCCGCAGTATTGCAACTGCACACCGACTGTTCGATGAAATGCCCAACCCAAATGTTGTGTCGTGGACCTCACTCATGGCTGGTTACGTCGACAACGGCCAGCCGAGTACCGCTCTTTTGCTGTTTGGGGAAATGTTGAGAAGTCCAGTTGTTCCTAATGATTTCACTTTTGCGACTGCGATTAAGGCCTGTTCGATCCTCTCGAATTTAAGATATGGTGAAAGGTTCCATGCCCATGTTGAGATTTTTGGTTATGGATGTAATATTGTGGTTTGTTCTTCTCTTATTGATATGTATGGAAAGTGTAATGATGTTGTTAAAGCTAGGAGTGTCTTTAATTCCATGTCTTGTAAGAATATAGTTTCTTGGACTTCGATGATTGCTGCTTATGCTCAGAATGCTCATGGTGATGAAGCATTAAAAGTGTTTAGGGAATTCACTAGTTTAAGTTCTGAACGTCCAAATCCTTACATGTTAGCTAGTGTGATTAGTGCTTGTGCAAGCCTGGGTAGGCTGGTTTCGGGAAAAGTCGTGCACGGTGCAGCTATTTGTCTTGGCTGTGATTCGAGCGAGGTAGTTGCAAGTGTGTTGGTTGATATGTATGCTAAATGTGGGAGTCTTGATTATTCTGATAACGTTTTTAACAGAATTTCAAACCCTTCTGTTATTCCTTACACTTCGATGATTGTGAGCACAGCAAAGTATGGATTTGGGAGAAAGTCTCTTCAACTCTTTGAAGAAATGGTTAGAAAAGGACTGAAACCTAACCATATCACTCTTCTTGGAGTCTTGCATGCTTGTAGCCATTCAGGGCTCCCTAATGAGGGCCTTTATTATTTGACATCCATGTATGAGAAATATGGGATAATGCCTGAGACTAAGCATTATACATGTGTTGTCGATATGCTAGCTCGATCTGGGGAGCTAGATAAAGCCTTTGACATAGCGAAATCGATGGATGTAGCGCCTGATGACAAGGCATTGTTGTGGGGAGCATTGCTTTCAGCGAGTAGGTGCCATGGCAGGGTAGATATTGCAGCTGAAGCTTGTCAGCAACTCGTGAATTCCAATAGACAAGTTGCTGGTGCATATGTTACTTTGTCGAATGCTTACGCGTCGGCTGGAGATATGGAGAAGGCTCACAAACTCCGAGTTGAGATGAAACATACTGGAGTTCACAAAGAACCAGGATGCAGTTGGATCGAGATAAAAGATTCAAGTTACATATTCTACGCCGGGGAAATAACTTCATGCCCACGAGGCGATGAAGTGTTGTGTTTACTGAGAGAGTTGGACCAGAAAATGAAAGATCGAGGTTACGTAAGAGGAAGGAAAGGATTGGTGTTTGTTGATATAGAAGAAGAGGCAGAAGAGGAAAAGGTTTGGTTGCACAGTGAGAGATTGGCATTGGGATTTGGTTTGATTAGCATTCCAAAAGGACTTACTATAAGAATAATGAAGAACTTGAGAATGTGCAGTGATTGTCATGAGGCTTTCAAGCTTATAAGTGAGATTATGGAGAGAGAATTTGTGGTTAGAGACATTAATAGATTTCATCATTTCCAAAGTGGTTGTTGCACTTGCAATGGTTTCTGGTAA

Coding sequence (CDS)

ATGTTGAAACGAAATCTCCATTTTGCCCTCACCAGGCCTTATCTTTCCCGCGAAAACGAACGGCCATTTCTTCAAACCATTGAAAATCTCAGTCTCCATCTTCGGAATTGCAACGATTTGATTTCTTCAATCTTCACTCACTCCATAGCCTTAAAGCTTGGATTCTTAAACAATACTGTCACTGTCAACCATCTCATCAATTGCTATGTCCGGTTCCGCAGTATTGCAACTGCACACCGACTGTTCGATGAAATGCCCAACCCAAATGTTGTGTCGTGGACCTCACTCATGGCTGGTTACGTCGACAACGGCCAGCCGAGTACCGCTCTTTTGCTGTTTGGGGAAATGTTGAGAAGTCCAGTTGTTCCTAATGATTTCACTTTTGCGACTGCGATTAAGGCCTGTTCGATCCTCTCGAATTTAAGATATGGTGAAAGGTTCCATGCCCATGTTGAGATTTTTGGTTATGGATGTAATATTGTGGTTTGTTCTTCTCTTATTGATATGTATGGAAAGTGTAATGATGTTGTTAAAGCTAGGAGTGTCTTTAATTCCATGTCTTGTAAGAATATAGTTTCTTGGACTTCGATGATTGCTGCTTATGCTCAGAATGCTCATGGTGATGAAGCATTAAAAGTGTTTAGGGAATTCACTAGTTTAAGTTCTGAACGTCCAAATCCTTACATGTTAGCTAGTGTGATTAGTGCTTGTGCAAGCCTGGGTAGGCTGGTTTCGGGAAAAGTCGTGCACGGTGCAGCTATTTGTCTTGGCTGTGATTCGAGCGAGGTAGTTGCAAGTGTGTTGGTTGATATGTATGCTAAATGTGGGAGTCTTGATTATTCTGATAACGTTTTTAACAGAATTTCAAACCCTTCTGTTATTCCTTACACTTCGATGATTGTGAGCACAGCAAAGTATGGATTTGGGAGAAAGTCTCTTCAACTCTTTGAAGAAATGGTTAGAAAAGGACTGAAACCTAACCATATCACTCTTCTTGGAGTCTTGCATGCTTGTAGCCATTCAGGGCTCCCTAATGAGGGCCTTTATTATTTGACATCCATGTATGAGAAATATGGGATAATGCCTGAGACTAAGCATTATACATGTGTTGTCGATATGCTAGCTCGATCTGGGGAGCTAGATAAAGCCTTTGACATAGCGAAATCGATGGATGTAGCGCCTGATGACAAGGCATTGTTGTGGGGAGCATTGCTTTCAGCGAGTAGGTGCCATGGCAGGGTAGATATTGCAGCTGAAGCTTGTCAGCAACTCGTGAATTCCAATAGACAAGTTGCTGGTGCATATGTTACTTTGTCGAATGCTTACGCGTCGGCTGGAGATATGGAGAAGGCTCACAAACTCCGAGTTGAGATGAAACATACTGGAGTTCACAAAGAACCAGGATGCAGTTGGATCGAGATAAAAGATTCAAGTTACATATTCTACGCCGGGGAAATAACTTCATGCCCACGAGGCGATGAAGTGTTGTGTTTACTGAGAGAGTTGGACCAGAAAATGAAAGATCGAGGTTACGTAAGAGGAAGGAAAGGATTGGTGTTTGTTGATATAGAAGAAGAGGCAGAAGAGGAAAAGGTTTGGTTGCACAGTGAGAGATTGGCATTGGGATTTGGTTTGATTAGCATTCCAAAAGGACTTACTATAAGAATAATGAAGAACTTGAGAATGTGCAGTGATTGTCATGAGGCTTTCAAGCTTATAAGTGAGATTATGGAGAGAGAATTTGTGGTTAGAGACATTAATAGATTTCATCATTTCCAAAGTGGTTGTTGCACTTGCAATGGTTTCTGGTAA

Protein sequence

MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTVTVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSPVVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKARSVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCNGFW

Homology

[Close]

BLAST of Cmc11g0308411.1 vs. NCBI nr
Match: XP_008458473.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Cucumis melo])

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV
Sbjct: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
           TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP
Sbjct: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
           SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
           MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420

Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
           CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480

Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
           FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540

Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
           LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600

Query: 601 GFW 604
           GFW
Sbjct: 601 GFW 603

[Close]

BLAST of Cmc11g0308411.1 vs. NCBI nr
Match: XP_004143199.1 (pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus] >KGN47194.1 hypothetical protein Csa_021072 [Cucumis sativus])

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 582/603 (96.52%), Postives = 590/603 (97.84%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKRNL+FALTRPYLSRENERPFLQTIENLS HLRNCNDLISSI THSIALKLGFLNNTV
Sbjct: 1   MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
            VNHLINCYVRFRSIATAH+LFDEMPNPNVVSWTSLMAGYVDNGQPSTAL LFGEMLRSP
Sbjct: 61  NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR+GE FHAHVEIFGYG NIVVCSSLIDMYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSE PNPYMLASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLVSGKV+HGAAI LGCDSSEVVASVLVDMYAKCGSLDYSD VFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYGFGRKSLQLFEEMVRKGLKPNHITL+GVLHACSHSGLPNEGLYYLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
           MPETKHYTCVVDMLAR GELDKAFD+AKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420

Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
           CQQLVNSNRQVAGAYVTLSN YASAGDMEKAHKLRVEMK TGVHKEPGCSWIEIKDSSYI
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480

Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
           FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540

Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
           LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF++GCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600

Query: 601 GFW 604
           GFW
Sbjct: 601 GFW 603

[Close]

BLAST of Cmc11g0308411.1 vs. NCBI nr
Match: XP_038875319.1 (pentatricopeptide repeat-containing protein At4g15720 isoform X1 [Benincasa hispida])

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 531/603 (88.06%), Postives = 569/603 (94.36%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKRNLHFALTRP LSR+NERP  QTIENLS +LR CNDL+SSI THSIALKLGFLN TV
Sbjct: 1   MLKRNLHFALTRPCLSRKNERPSFQTIENLSRYLRECNDLMSSISTHSIALKLGFLNYTV 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
            VNHLINCYVRFR++ATAH+LFDEMPNPNVVSWTSLMAGYV+NG+P+TALLLF  M RSP
Sbjct: 61  PVNHLINCYVRFRNVATAHQLFDEMPNPNVVSWTSLMAGYVNNGRPTTALLLFRAMSRSP 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           +VPNDFTF TAIKACSILSNLR+GE+ HAHVEIFGYG N+VVCSSLIDMYGKCNDVV+AR
Sbjct: 121 IVPNDFTFTTAIKACSILSNLRHGEKLHAHVEIFGYGGNVVVCSSLIDMYGKCNDVVRAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
           SVFNSMSCKNIVSWTSMIAAYAQNA+GD+ALKVFREF+S SSE PNP+MLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAYGDDALKVFREFSSWSSEHPNPHMLASVISACASL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRL+SGKV+HGAA+ LG DSS VVASVLVDMYAKCG+L+YSD VFNRISNPSVIPYTSMI
Sbjct: 241 GRLISGKVMHGAAVRLGSDSSNVVASVLVDMYAKCGNLEYSDKVFNRISNPSVIPYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYGFGRKSLQLFEEMVRKGLKPNHIT +GVLHACSHSGLPNEGL YLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYEKYGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
           MPE KHYTCVVDMLAR+G+LDKA+++AKSM+V  DDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPEIKHYTCVVDMLARAGQLDKAYELAKSMEVVSDDKALLWGALLSASRCHGRVDIAAEA 420

Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
           C+QLVNSN QVAGAYVTLSNAYA AGDMEKA +LRVEMKHTGV KEPGCSWIEIKDSSY+
Sbjct: 421 CKQLVNSNEQVAGAYVTLSNAYALAGDMEKAQRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480

Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
           FYAGEITS PRGDEVLCLLRELD+KM DRGYVRG +GL FVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSSPRGDEVLCLLRELDRKMNDRGYVRGSRGLAFVDIEEEAEEEKVWLHSERLA 540

Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
           LGFGLISIPKGL IRIMKNLRMCSDCHEAFKLISEI+EREFVVRDINRFHHF++GCCTCN
Sbjct: 541 LGFGLISIPKGLIIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKNGCCTCN 600

Query: 601 GFW 604
           GFW
Sbjct: 601 GFW 603

[Close]

BLAST of Cmc11g0308411.1 vs. NCBI nr
Match: KAG7026300.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1002.7 bits (2591), Expect = 1.4e-288
Identity = 498/604 (82.45%), Postives = 545/604 (90.23%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKR+L FAL        NERP LQTIENLS HLR+C DLISS   HSIALKLGFLN T+
Sbjct: 1   MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
           T NHLINCYVRFR +A AH+LFDEMP  NVVSWTSLMAGYVD+GQPS AL LFG M R+ 
Sbjct: 61  TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDDGQPSIALSLFGAMSRTS 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR GE+FHA +EIFGYG N+VVCSSLIDMYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VF+SMSCKNIVSWTSMIAAYAQNAHGD+ALK+FREF S S ERPN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLVSGKVVH AAI LGCDS++VVASVLVDMYAKCGSL+YSD VF RI NP VI YTSMI
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYG GR+SL+LFEEMVRKGLKPNH+T +GVLHACSHSGLP+EGL+YLTSMYEK+GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAP-DDKALLWGALLSASRCHGRVDIAAE 420
           MPETKHYTCVVDMLAR+GELDKA+ +AKSM   P DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420

Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSY 480
           ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA +LRVEMKH+GV+KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480

Query: 481 IFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERL 540
           +FYAG++ SCPRGDEVL LLREL++KMKDRGY RG KGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540

Query: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTC 600
           ALGF LISIP+GLTIRIMKNLRMCSDCHEAFKLISEI+ER+FVVRDINRFHHF++G CTC
Sbjct: 541 ALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDINRFHHFKTGYCTC 596

Query: 601 NGFW 604
           N FW
Sbjct: 601 NDFW 596

[Close]

BLAST of Cmc11g0308411.1 vs. NCBI nr
Match: XP_022930461.1 (pentatricopeptide repeat-containing protein At4g15720 [Cucurbita moschata])

HSP 1 Score: 1001.9 bits (2589), Expect = 2.4e-288
Identity = 496/604 (82.12%), Postives = 545/604 (90.23%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKR+L FAL        NERP LQTIENLS HLR+C DLISS   HSIALKLGFLN T+
Sbjct: 1   MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
           T NHLINCYVRFR +A AH+LFDEMP  NVVSWTSLMAGYVDNGQPS AL LFG M R+ 
Sbjct: 61  TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDNGQPSIALSLFGAMSRTS 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR GE+FHA +EIFGYG N+VVCSSLIDMYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VF+SMSCKNIVSWTSMIAAYAQNAHGD+ALK+FREF S S ERPN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLV+GKVVH AAI LGCDS++VVASVLVDMYAKCGSL+YSD VF RI NP VI YTSMI
Sbjct: 241 GRLVAGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYG GR+SL+LFEEMVRKGLKPNH+T +GVLHACSHSGLP+EGL+YLTSMYEK+GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAP-DDKALLWGALLSASRCHGRVDIAAE 420
           MPETKHYTCVVDMLAR+GELDKA+ +AKSM   P DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420

Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSY 480
           ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA +LRVEMKH+GV+KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480

Query: 481 IFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERL 540
           +FYAG++ SCPRGDEVL LLREL++KMKDRGY RG KGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540

Query: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTC 600
           ALGF LISIP+GLTIR+MKNLRMCSDCHEAFKLISEI+ER+FVVRD+NRFHHF++G CTC
Sbjct: 541 ALGFCLISIPEGLTIRMMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCTC 596

Query: 601 NGFW 604
           N FW
Sbjct: 601 NDFW 596

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy Swiss-Prot
Match: Q8VYH0 (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H1 PE=2 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 7.4e-184
Identity = 331/613 (54.00%), Postives = 443/613 (72.27%), Query Frame = 0


Query: 4   RNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFT---HSIALKLGFLNNTV 63
           +N+H A        + +  F   ++  +  +   ++  ++ FT   H++ LKLGF ++T 
Sbjct: 7   QNVHLAPATSLFVPQYKNDFFH-LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTF 66

Query: 64  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRS- 123
           TVNHL+  YV+ + I TA +LFDEM  PNVVSWTS+++GY D G+P  AL +F +M    
Sbjct: 67  TVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDR 126

Query: 124 PVVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKA 183
           PV PN++TFA+  KACS L+  R G+  HA +EI G   NIVV SSL+DMYGKCNDV  A
Sbjct: 127 PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETA 186

Query: 184 RSVFNSM--SCKNIVSWTSMIAAYAQNAHGDEALKVFREF-TSLSSERPNPYMLASVISA 243
           R VF+SM    +N+VSWTSMI AYAQNA G EA+++FR F  +L+S+R N +MLASVISA
Sbjct: 187 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 246

Query: 244 CASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPY 303
           C+SLGRL  GKV HG     G +S+ VVA+ L+DMYAKCGSL  ++ +F RI   SVI Y
Sbjct: 247 CSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 306

Query: 304 TSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYE 363
           TSMI++ AK+G G  +++LF+EMV   + PN++TLLGVLHACSHSGL NEGL YL+ M E
Sbjct: 307 TSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 366

Query: 364 KYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDI 423
           KYG++P+++HYTCVVDML R G +D+A+++AK+++V  +  ALLWGALLSA R HGRV+I
Sbjct: 367 KYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEI 426

Query: 424 AAEACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKD 483
            +EA ++L+ SN+QV  AY+ LSNAYA +G  E +  LR+EMK +G  KE  CSWIE KD
Sbjct: 427 VSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKD 486

Query: 484 SSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGL------VFVDIEEEAEEE 543
           S Y+F+AG++ SC    E+   L++L+++MK+RG+ RG   +      VFVD++EEA++E
Sbjct: 487 SVYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTSSSVFVDVDEEAKDE 546

Query: 544 KVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFH 603
            V LH ERLAL +GL+ +P G TIRIM NLRMC DCHEAFKLISEI+ERE VVRD+NRFH
Sbjct: 547 MVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFH 606

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 3.6e-114
Identity = 214/542 (39.48%), Postives = 324/542 (59.78%), Query Frame = 0


Query: 63  NHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP-V 122
           N ++N Y     +  A +LFDEM   +  SWT+++ GYV   QP  AL+L+  M R P  
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214

Query: 123 VPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKARS 182
            PN FT + A+ A + +  +R G+  H H+   G   + V+ SSL+DMYGKC  + +AR+
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274

Query: 183 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASLG 242
           +F+ +  K++VSWTSMI  Y +++   E   +F E    S ERPN Y  A V++ACA L 
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334

Query: 243 RLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMIV 302
               GK VHG    +G D     +S LVDMY KCG+++ + +V +    P ++ +TS+I 
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394

Query: 303 STAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGIM 362
             A+ G   ++L+ F+ +++ G KP+H+T + VL AC+H+GL  +GL +  S+ EK+ + 
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454

Query: 363 PETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 422
             + HYTC+VD+LARSG  ++   +   M + P     LW ++L     +G +D+A EA 
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAA 514

Query: 423 QQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYIF 482
           Q+L     +    YVT++N YA+AG  E+  K+R  M+  GV K PG SW EIK   ++F
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574

Query: 483 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 542
            A + TS P  ++++  LREL +KMK+ GYV     LV  D+E+E +EE +  HSE+LA+
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPA-TSLVLHDVEDEQKEENLVYHSEKLAV 634

Query: 543 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCNG 602
            F ++S  +G  I++ KNLR C DCH A K IS I +R+  VRD  RFH F++G C+C  
Sbjct: 635 AFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGD 691

Query: 603 FW 604
           +W
Sbjct: 695 YW 691

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy Swiss-Prot
Match: O23266 (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H13 PE=1 SV=3)

HSP 1 Score: 408.3 bits (1048), Expect = 1.5e-112
Identity = 223/611 (36.50%), Postives = 358/611 (58.59%), Query Frame = 0


Query: 27  IENLSLHLRNCNDLISSIFTHSIALKLGFLNNTVTVNHLINCYVRFRSIATAHRLFDEMP 86
           +  L L  RN   L ++   H+  +KLG +      N L+N Y +  + + A ++FDEMP
Sbjct: 7   LHQLQLCARN-RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 66

Query: 87  NPNVVSWTSLMAGYVDNGQPSTALLLFGEM-LRSPVVPNDFTFATAIKACSILSNLRYGE 146
           + + ++W S++            L +F  +   S + P+DF F+  +KAC+ L ++ +G 
Sbjct: 67  HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 126

Query: 147 RFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKARSVFNSMSCKNIVSWTSMIAAYAQNA 206
           + H H  +  Y  + VV SSL+DMY KC  +  A++VF+S+  KN +SWT+M++ YA++ 
Sbjct: 127 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 186

Query: 207 HGDEALKVFR----------------------------EFTSLSSERP---NPYMLASVI 266
             +EAL++FR                             FT +  ER    +P +L+S++
Sbjct: 187 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 246

Query: 267 SACASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVI 326
            ACA+L   ++G+ VHG  I LG DS   +++ L+DMYAKC  +  + ++F+R+ +  V+
Sbjct: 247 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 306

Query: 327 PYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSM 386
            +TS+IV  A++G   K+L L+++MV  G+KPN +T +G+++ACSH G   +G     SM
Sbjct: 307 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 366

Query: 387 YEKYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRV 446
            + YGI P  +HYTC++D+L RSG LD+A ++  +M   PD+    W ALLSA +  GR 
Sbjct: 367 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT--WAALLSACKRQGRG 426

Query: 447 DIAAEACQQLVNSNR-QVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIE 506
            +       LV+S + +    Y+ LSN YASA    K  + R ++    V K+PG S +E
Sbjct: 427 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 486

Query: 507 IKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDR-GYVRGRKGLVFVDIEEEAEEEKV 566
           ++  + +FYAGE TS P  +++  LL++L+++M+ R GYV     ++  D++E+ +E+ +
Sbjct: 487 VRKETEVFYAGE-TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILH-DMDEQEKEKLL 546

Query: 567 WLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF 604
           + HSER A+ +GL+    G  IRI+KNLR+C DCH   K ISEI ERE +VRD  R+HHF
Sbjct: 547 FWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHF 606

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.1e-110
Identity = 208/561 (37.08%), Postives = 330/561 (58.82%), Query Frame = 0


Query: 45  FTHSIALKLGFLNNTVTVNHLINCYVRFRSIATAHRLFDEMPNP--NVVSWTSLMAGYVD 104
           F H+   +LGF  +    N LI  Y + R + +A  +F+ +P P   +VSWT++++ Y  
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199

Query: 105 NGQPSTALLLFGEMLRSPVVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVV 164
           NG+P  AL +F +M +  V P+     + + A + L +L+ G   HA V   G      +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259

Query: 165 CSSLIDMYGKCNDVVKARSVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSS 224
             SL  MY KC  V  A+ +F+ M   N++ W +MI+ YA+N +  EA+ +F E  +   
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KD 319

Query: 225 ERPNPYMLASVISACASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSD 284
            RP+   + S ISACA +G L   + ++             ++S L+DM+AKCGS++ + 
Sbjct: 320 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 379

Query: 285 NVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSG 344
            VF+R  +  V+ +++MIV    +G  R+++ L+  M R G+ PN +T LG+L AC+HSG
Sbjct: 380 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 439

Query: 345 LPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWG 404
           +  EG ++   M + + I P+ +HY CV+D+L R+G LD+A+++ K M V P     +WG
Sbjct: 440 MVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG--VTVWG 499

Query: 405 ALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTG 464
           ALLSA + H  V++   A QQL + +    G YV LSN YA+A   ++  ++RV MK  G
Sbjct: 500 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 559

Query: 465 VHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVD 524
           ++K+ GCSW+E++     F  G+  S PR +E+   +  ++ ++K+ G+V   K     D
Sbjct: 560 LNKDVGCSWVEVRGRLEAFRVGD-KSHPRYEEIERQVEWIESRLKEGGFV-ANKDASLHD 619

Query: 525 IEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFV 584
           + +E  EE +  HSER+A+ +GLIS P+G  +RI KNLR C +CH A KLIS++++RE V
Sbjct: 620 LNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIV 679

Query: 585 VRDINRFHHFQSGCCTCNGFW 604
           VRD NRFHHF+ G C+C  +W
Sbjct: 680 VRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 9.2e-110
Identity = 212/564 (37.59%), Postives = 338/564 (59.93%), Query Frame = 0


Query: 40  LISSIFTHSIALKLGFLNNTVTVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAG 99
           LI     H+  L+  F ++ V  N L+N Y +  S+  A ++F++MP  + V+WT+L++G
Sbjct: 76  LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 100 YVDNGQPSTALLLFGEMLRSPVVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCN 159
           Y  + +P  ALL F +MLR    PN+FT ++ IKA +       G + H      G+  N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195

Query: 160 IVVCSSLIDMYGKCNDVVKARSVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTS 219
           + V S+L+D+Y +   +  A+ VF+++  +N VSW ++IA +A+ +  ++AL++F+    
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255

Query: 220 LSSERPNPYMLASVISACASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLD 279
               RP+ +  AS+  AC+S G L  GK VH   I  G        + L+DMYAK GS+ 
Sbjct: 256 -DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 315

Query: 280 YSDNVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACS 339
            +  +F+R++   V+ + S++ + A++GFG++++  FEEM R G++PN I+ L VL ACS
Sbjct: 316 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 375

Query: 340 HSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKAL 399
           HSGL +EG +Y   M +K GI+PE  HY  VVD+L R+G+L++A    + M + P   A 
Sbjct: 376 HSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP--TAA 435

Query: 400 LWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMK 459
           +W ALL+A R H   ++ A A + +   +    G +V L N YAS G    A ++R +MK
Sbjct: 436 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 495

Query: 460 HTGVHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLV 519
            +GV KEP CSW+EI+++ ++F A +    P+ +E+     E+  K+K+ GYV      V
Sbjct: 496 ESGVKKEPACSWVEIENAIHMFVAND-ERHPQREEIARKWEEVLAKIKELGYVPDTSH-V 555

Query: 520 FVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMER 579
            V ++++  E  +  HSE++AL F L++ P G TI I KN+R+C DCH A KL S+++ R
Sbjct: 556 IVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGR 615

Query: 580 EFVVRDINRFHHFQSGCCTCNGFW 604
           E +VRD NRFHHF+ G C+C  +W
Sbjct: 616 EIIVRDTNRFHHFKDGNCSCKDYW 633

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy TrEMBL
Match: A0A1S3C8I5 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucumis melo OX=3656 GN=LOC103497869 PE=3 SV=1)

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV
Sbjct: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
           TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP
Sbjct: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
           SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
           MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420

Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
           CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480

Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
           FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540

Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
           LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600

Query: 601 GFW 604
           GFW
Sbjct: 601 GFW 603

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy TrEMBL
Match: A0A0A0KEC7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G197240 PE=3 SV=1)

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 582/603 (96.52%), Postives = 590/603 (97.84%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKRNL+FALTRPYLSRENERPFLQTIENLS HLRNCNDLISSI THSIALKLGFLNNTV
Sbjct: 1   MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
            VNHLINCYVRFRSIATAH+LFDEMPNPNVVSWTSLMAGYVDNGQPSTAL LFGEMLRSP
Sbjct: 61  NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR+GE FHAHVEIFGYG NIVVCSSLIDMYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSE PNPYMLASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLVSGKV+HGAAI LGCDSSEVVASVLVDMYAKCGSLDYSD VFNRISNPSVIPYTSMI
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYGFGRKSLQLFEEMVRKGLKPNHITL+GVLHACSHSGLPNEGLYYLTSMYEKYGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
           MPETKHYTCVVDMLAR GELDKAFD+AKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420

Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
           CQQLVNSNRQVAGAYVTLSN YASAGDMEKAHKLRVEMK TGVHKEPGCSWIEIKDSSYI
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480

Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
           FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540

Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
           LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF++GCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600

Query: 601 GFW 604
           GFW
Sbjct: 601 GFW 603

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy TrEMBL
Match: A0A6J1ER03 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita moschata OX=3662 GN=LOC111436901 PE=3 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 1.1e-288
Identity = 496/604 (82.12%), Postives = 545/604 (90.23%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKR+L FAL        NERP LQTIENLS HLR+C DLISS   HSIALKLGFLN T+
Sbjct: 1   MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
           T NHLINCYVRFR +A AH+LFDEMP  NVVSWTSLMAGYVDNGQPS AL LFG M R+ 
Sbjct: 61  TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDNGQPSIALSLFGAMSRTS 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR GE+FHA +EIFGYG N+VVCSSLIDMYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VF+SMSCKNIVSWTSMIAAYAQNAHGD+ALK+FREF S S ERPN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLV+GKVVH AAI LGCDS++VVASVLVDMYAKCGSL+YSD VF RI NP VI YTSMI
Sbjct: 241 GRLVAGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYG GR+SL+LFEEMVRKGLKPNH+T +GVLHACSHSGLP+EGL+YLTSMYEK+GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAP-DDKALLWGALLSASRCHGRVDIAAE 420
           MPETKHYTCVVDMLAR+GELDKA+ +AKSM   P DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420

Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSY 480
           ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA +LRVEMKH+GV+KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480

Query: 481 IFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERL 540
           +FYAG++ SCPRGDEVL LLREL++KMKDRGY RG KGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540

Query: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTC 600
           ALGF LISIP+GLTIR+MKNLRMCSDCHEAFKLISEI+ER+FVVRD+NRFHHF++G CTC
Sbjct: 541 ALGFCLISIPEGLTIRMMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCTC 596

Query: 601 NGFW 604
           N FW
Sbjct: 601 NDFW 596

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy TrEMBL
Match: A0A6J1CB36 (pentatricopeptide repeat-containing protein At4g15720 OS=Momordica charantia OX=3673 GN=LOC111009611 PE=3 SV=1)

HSP 1 Score: 997.3 bits (2577), Expect = 2.8e-287
Identity = 484/603 (80.27%), Postives = 541/603 (89.72%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLK N+HFALTRP LSRENER   QTI N S HLRNCNDLIS+   H IALKLGFL  T+
Sbjct: 1   MLKPNIHFALTRPRLSRENERLSFQTIANFSRHLRNCNDLISATSAHPIALKLGFLTQTL 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
            VNHLINCYVR R ++ AH LFDEMP PNVVSWTSLMAGY+D  QPSTAL LFGEM RSP
Sbjct: 61  PVNHLINCYVRLRRVSIAHHLFDEMPTPNVVSWTSLMAGYIDACQPSTALSLFGEMSRSP 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR G++FHA+VEI GYG N+VVCSSLIDMYGKCNDVV+AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLREGKKFHAYVEISGYGGNVVVCSSLIDMYGKCNDVVRAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VF+SM+CKNIVSWTSMIA YAQNAHGD+ALK+FREF+SL+ E PN +MLAS ISACASL
Sbjct: 181 RVFDSMACKNIVSWTSMIATYAQNAHGDDALKLFREFSSLNYEHPNHFMLASAISACASL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLV G+VVHGA I LG DS++V++SVLVDMYAKCGSL+ SD VF+RI NPSVIPYTSMI
Sbjct: 241 GRLVLGRVVHGAVIRLGHDSNDVISSVLVDMYAKCGSLNCSDKVFSRILNPSVIPYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VS AKYG GR+SLQLFEEMVRKGLKPNH+T +GVL+ACSHSGL +EGL YLTSMYE++GI
Sbjct: 301 VSRAKYGLGRQSLQLFEEMVRKGLKPNHVTFVGVLYACSHSGLLDEGLSYLTSMYERHGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
           MPE+KHYTCVVDMLAR G+LD+A+ +AKSM+V PDD+ALLWGALLSASR HGRVDIA EA
Sbjct: 361 MPESKHYTCVVDMLARVGQLDRAYQLAKSMEVEPDDEALLWGALLSASRYHGRVDIAVEA 420

Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
           CQ+LVNSN+QVAGAYVTLSNAYASAGDMEKAH+LRVEMKHTG++KEPGCSW+EIK+ +Y+
Sbjct: 421 CQRLVNSNQQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGINKEPGCSWLEIKNLTYV 480

Query: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
           FYAG++ SCP   EVLCLLREL++KMKDRGY RG KGLVFVD+EEEAEEE V LHSERLA
Sbjct: 481 FYAGDVESCPHSKEVLCLLRELERKMKDRGYGRGSKGLVFVDVEEEAEEEAVGLHSERLA 540

Query: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
           LGFGLISIPKG+TIRIMKNLRMCSDCHEAFKLISEI+ER+FVVRD+NRFHHF  GCCTCN
Sbjct: 541 LGFGLISIPKGITIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFTGGCCTCN 600

Query: 601 GFW 604
            FW
Sbjct: 601 DFW 603

[Close]

BLAST of Cmc11g0308411.1 vs. ExPASy TrEMBL
Match: A0A6J1KGB2 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita maxima OX=3661 GN=LOC111494855 PE=3 SV=1)

HSP 1 Score: 987.6 bits (2552), Expect = 2.2e-284
Identity = 488/604 (80.79%), Postives = 541/604 (89.57%), Query Frame = 0


Query: 1   MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
           MLKR+L FAL        NERP LQTIENLS HLR+C DL+SS   HSIALKLGFLN T+
Sbjct: 1   MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLVSSTSIHSIALKLGFLNQTI 60

Query: 61  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
           T NHLINCYVRFR +A AH+LFDEMP  NVVSWTSLMAGYV++GQP  AL LFG M R+ 
Sbjct: 61  TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVNDGQPCIALSLFGAMSRTS 120

Query: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
           VVPNDFTFATAIKACSILSNLR GE+FHA +EIFGYG N+VVCSSLIDMYGKCN+V++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNNVIRAR 180

Query: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
            VF+SMSCKNI+SWTSMIAAYAQNAH D+ALK+FREF S S E PN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIISWTSMIAAYAQNAHSDDALKLFREFGSSSWEHPNHFMLASVISACACL 240

Query: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
           GRLVSGKVVH AAI LGCDS++VVASVLVDMYAKCGSL+YSD VF RI NP VI YTSMI
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300

Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
           VSTAKYG GR+SL+LFEEMVRKGLKPNH+T +GVLHACSHSGLP+EGL+YLTSMYEK+GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360

Query: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAP-DDKALLWGALLSASRCHGRVDIAAE 420
           MPETKHYTCVVDMLAR+GELDKA+ +AKSM   P DD+ALLWGALLS SR HGRVDIAAE
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420

Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSY 480
           ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA +LRVEMKH+GV+KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480

Query: 481 IFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERL 540
           +FYAG++ SCPRG+EVL LLREL++KMK RGY RG KGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGNEVLHLLRELERKMKGRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540

Query: 541 ALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTC 600
           ALGF LISIP+GLTIRIMKNLRMCSDCHEAFKLISEI+ER+FVVRD+NRFHHF++G CTC
Sbjct: 541 ALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCTC 596

Query: 601 NGFW 604
           N FW
Sbjct: 601 NDFW 596

[Close]

BLAST of Cmc11g0308411.1 vs. TAIR 10
Match: AT4G15720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 645.2 bits (1663), Expect = 5.2e-185
Identity = 331/613 (54.00%), Postives = 443/613 (72.27%), Query Frame = 0


Query: 4   RNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFT---HSIALKLGFLNNTV 63
           +N+H A        + +  F   ++  +  +   ++  ++ FT   H++ LKLGF ++T 
Sbjct: 7   QNVHLAPATSLFVPQYKNDFFH-LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTF 66

Query: 64  TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRS- 123
           TVNHL+  YV+ + I TA +LFDEM  PNVVSWTS+++GY D G+P  AL +F +M    
Sbjct: 67  TVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDR 126

Query: 124 PVVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKA 183
           PV PN++TFA+  KACS L+  R G+  HA +EI G   NIVV SSL+DMYGKCNDV  A
Sbjct: 127 PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETA 186

Query: 184 RSVFNSM--SCKNIVSWTSMIAAYAQNAHGDEALKVFREF-TSLSSERPNPYMLASVISA 243
           R VF+SM    +N+VSWTSMI AYAQNA G EA+++FR F  +L+S+R N +MLASVISA
Sbjct: 187 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 246

Query: 244 CASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPY 303
           C+SLGRL  GKV HG     G +S+ VVA+ L+DMYAKCGSL  ++ +F RI   SVI Y
Sbjct: 247 CSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 306

Query: 304 TSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYE 363
           TSMI++ AK+G G  +++LF+EMV   + PN++TLLGVLHACSHSGL NEGL YL+ M E
Sbjct: 307 TSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 366

Query: 364 KYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDI 423
           KYG++P+++HYTCVVDML R G +D+A+++AK+++V  +  ALLWGALLSA R HGRV+I
Sbjct: 367 KYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEI 426

Query: 424 AAEACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKD 483
            +EA ++L+ SN+QV  AY+ LSNAYA +G  E +  LR+EMK +G  KE  CSWIE KD
Sbjct: 427 VSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKD 486

Query: 484 SSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGL------VFVDIEEEAEEE 543
           S Y+F+AG++ SC    E+   L++L+++MK+RG+ RG   +      VFVD++EEA++E
Sbjct: 487 SVYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTSSSVFVDVDEEAKDE 546

Query: 544 KVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFH 603
            V LH ERLAL +GL+ +P G TIRIM NLRMC DCHEAFKLISEI+ERE VVRD+NRFH
Sbjct: 547 MVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFH 606

[Close]

BLAST of Cmc11g0308411.1 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 413.7 bits (1062), Expect = 2.6e-115
Identity = 214/542 (39.48%), Postives = 324/542 (59.78%), Query Frame = 0


Query: 63  NHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP-V 122
           N ++N Y     +  A +LFDEM   +  SWT+++ GYV   QP  AL+L+  M R P  
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214

Query: 123 VPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKARS 182
            PN FT + A+ A + +  +R G+  H H+   G   + V+ SSL+DMYGKC  + +AR+
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274

Query: 183 VFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASLG 242
           +F+ +  K++VSWTSMI  Y +++   E   +F E    S ERPN Y  A V++ACA L 
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334

Query: 243 RLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMIV 302
               GK VHG    +G D     +S LVDMY KCG+++ + +V +    P ++ +TS+I 
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394

Query: 303 STAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGIM 362
             A+ G   ++L+ F+ +++ G KP+H+T + VL AC+H+GL  +GL +  S+ EK+ + 
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454

Query: 363 PETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEAC 422
             + HYTC+VD+LARSG  ++   +   M + P     LW ++L     +G +D+A EA 
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP--SKFLWASVLGGCSTYGNIDLAEEAA 514

Query: 423 QQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYIF 482
           Q+L     +    YVT++N YA+AG  E+  K+R  M+  GV K PG SW EIK   ++F
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574

Query: 483 YAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLAL 542
            A + TS P  ++++  LREL +KMK+ GYV     LV  D+E+E +EE +  HSE+LA+
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPA-TSLVLHDVEDEQKEENLVYHSEKLAV 634

Query: 543 GFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCNG 602
            F ++S  +G  I++ KNLR C DCH A K IS I +R+  VRD  RFH F++G C+C  
Sbjct: 635 AFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGD 691

Query: 603 FW 604
           +W
Sbjct: 695 YW 691

[Close]

BLAST of Cmc11g0308411.1 vs. TAIR 10
Match: AT4G14050.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-113
Identity = 223/611 (36.50%), Postives = 358/611 (58.59%), Query Frame = 0


Query: 27  IENLSLHLRNCNDLISSIFTHSIALKLGFLNNTVTVNHLINCYVRFRSIATAHRLFDEMP 86
           +  L L  RN   L ++   H+  +KLG +      N L+N Y +  + + A ++FDEMP
Sbjct: 7   LHQLQLCARN-RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 66

Query: 87  NPNVVSWTSLMAGYVDNGQPSTALLLFGEM-LRSPVVPNDFTFATAIKACSILSNLRYGE 146
           + + ++W S++            L +F  +   S + P+DF F+  +KAC+ L ++ +G 
Sbjct: 67  HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 126

Query: 147 RFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKARSVFNSMSCKNIVSWTSMIAAYAQNA 206
           + H H  +  Y  + VV SSL+DMY KC  +  A++VF+S+  KN +SWT+M++ YA++ 
Sbjct: 127 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 186

Query: 207 HGDEALKVFR----------------------------EFTSLSSERP---NPYMLASVI 266
             +EAL++FR                             FT +  ER    +P +L+S++
Sbjct: 187 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 246

Query: 267 SACASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVI 326
            ACA+L   ++G+ VHG  I LG DS   +++ L+DMYAKC  +  + ++F+R+ +  V+
Sbjct: 247 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 306

Query: 327 PYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSM 386
            +TS+IV  A++G   K+L L+++MV  G+KPN +T +G+++ACSH G   +G     SM
Sbjct: 307 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 366

Query: 387 YEKYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRV 446
            + YGI P  +HYTC++D+L RSG LD+A ++  +M   PD+    W ALLSA +  GR 
Sbjct: 367 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT--WAALLSACKRQGRG 426

Query: 447 DIAAEACQQLVNSNR-QVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIE 506
            +       LV+S + +    Y+ LSN YASA    K  + R ++    V K+PG S +E
Sbjct: 427 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 486

Query: 507 IKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDR-GYVRGRKGLVFVDIEEEAEEEKV 566
           ++  + +FYAGE TS P  +++  LL++L+++M+ R GYV     ++  D++E+ +E+ +
Sbjct: 487 VRKETEVFYAGE-TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILH-DMDEQEKEKLL 546

Query: 567 WLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF 604
           + HSER A+ +GL+    G  IRI+KNLR+C DCH   K ISEI ERE +VRD  R+HHF
Sbjct: 547 FWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHF 606

[Close]

BLAST of Cmc11g0308411.1 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 402.1 bits (1032), Expect = 7.7e-112
Identity = 208/561 (37.08%), Postives = 330/561 (58.82%), Query Frame = 0


Query: 45  FTHSIALKLGFLNNTVTVNHLINCYVRFRSIATAHRLFDEMPNP--NVVSWTSLMAGYVD 104
           F H+   +LGF  +    N LI  Y + R + +A  +F+ +P P   +VSWT++++ Y  
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199

Query: 105 NGQPSTALLLFGEMLRSPVVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVV 164
           NG+P  AL +F +M +  V P+     + + A + L +L+ G   HA V   G      +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259

Query: 165 CSSLIDMYGKCNDVVKARSVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSS 224
             SL  MY KC  V  A+ +F+ M   N++ W +MI+ YA+N +  EA+ +F E  +   
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KD 319

Query: 225 ERPNPYMLASVISACASLGRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSD 284
            RP+   + S ISACA +G L   + ++             ++S L+DM+AKCGS++ + 
Sbjct: 320 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 379

Query: 285 NVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSG 344
            VF+R  +  V+ +++MIV    +G  R+++ L+  M R G+ PN +T LG+L AC+HSG
Sbjct: 380 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 439

Query: 345 LPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWG 404
           +  EG ++   M + + I P+ +HY CV+D+L R+G LD+A+++ K M V P     +WG
Sbjct: 440 MVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG--VTVWG 499

Query: 405 ALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTG 464
           ALLSA + H  V++   A QQL + +    G YV LSN YA+A   ++  ++RV MK  G
Sbjct: 500 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 559

Query: 465 VHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVD 524
           ++K+ GCSW+E++     F  G+  S PR +E+   +  ++ ++K+ G+V   K     D
Sbjct: 560 LNKDVGCSWVEVRGRLEAFRVGD-KSHPRYEEIERQVEWIESRLKEGGFV-ANKDASLHD 619

Query: 525 IEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFV 584
           + +E  EE +  HSER+A+ +GLIS P+G  +RI KNLR C +CH A KLIS++++RE V
Sbjct: 620 LNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIV 679

Query: 585 VRDINRFHHFQSGCCTCNGFW 604
           VRD NRFHHF+ G C+C  +W
Sbjct: 680 VRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of Cmc11g0308411.1 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-110
Identity = 218/594 (36.70%), Postives = 336/594 (56.57%), Query Frame = 0


Query: 15  LSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTVTVNHLINCYVRFRS 74
           LS+E+  P  QT E L L   + + L  ++  H   L  G   +      LI  Y    S
Sbjct: 69  LSQESS-PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 128

Query: 75  IATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSPVVPNDFTFATAIKA 134
           +  A ++FD+     +  W +L       G     L L+ +M R  V  + FT+   +KA
Sbjct: 129 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 188

Query: 135 C----SILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKARSVFNSMSCKN 194
           C      +++L  G+  HAH+   GY  ++ + ++L+DMY +   V  A  VF  M  +N
Sbjct: 189 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 248

Query: 195 IVSWTSMIAAYAQNAHGDEALKVFRE-FTSLSSERPNPYMLASVISACASLGRLVSGKVV 254
           +VSW++MIA YA+N    EAL+ FRE         PN   + SV+ ACASL  L  GK++
Sbjct: 249 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 308

Query: 255 HGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMIVSTAKYGFG 314
           HG  +  G DS   V S LV MY +CG L+    VF+R+ +  V+ + S+I S   +G+G
Sbjct: 309 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 368

Query: 315 RKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTC 374
           +K++Q+FEEM+  G  P  +T + VL ACSH GL  EG     +M+  +GI P+ +HY C
Sbjct: 369 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 428

Query: 375 VVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNR 434
           +VD+L R+  LD+A  + + M   P  K  +WG+LL + R HG V++A  A ++L     
Sbjct: 429 MVDLLGRANRLDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEP 488

Query: 435 QVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYIFYAGEITSC 494
           + AG YV L++ YA A   ++  +++  ++H G+ K PG  W+E++   Y F + +  + 
Sbjct: 489 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN- 548

Query: 495 PRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIP 554
           P  +++   L +L + MK++GY+   KG+++ ++E E +E  V  HSE+LAL FGLI+  
Sbjct: 549 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTS 608

Query: 555 KGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCNGFW 604
           KG  IRI KNLR+C DCH   K IS+ ME+E +VRD+NRFH F++G C+C  +W
Sbjct: 609 KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

The following BLAST results are available for this feature:

BLAST of Cmc11g0308411.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458473.1	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Cucumis melo]	[more]
XP_004143199.1	0.0e+00	96.52	pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus] >KGN4719...	[more]
XP_038875319.1	0.0e+00	88.06	pentatricopeptide repeat-containing protein At4g15720 isoform X1 [Benincasa hisp...	[more]
KAG7026300.1	1.4e-288	82.45	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022930461.1	2.4e-288	82.12	pentatricopeptide repeat-containing protein At4g15720 [Cucurbita moschata]	[more]

BLAST of Cmc11g0308411.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYH0	7.4e-184	54.00	Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana OX...	[more]
O23169	3.6e-114	39.48	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]
O23266	1.5e-112	36.50	Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop...	[more]
Q9LTV8	1.1e-110	37.08	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9LIQ7	9.2e-110	37.59	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]

BLAST of Cmc11g0308411.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8I5	0.0e+00	100.00	pentatricopeptide repeat-containing protein At4g15720 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KEC7	0.0e+00	96.52	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1972...	[more]
A0A6J1ER03	1.1e-288	82.12	pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita moschata OX=3...	[more]
A0A6J1CB36	2.8e-287	80.27	pentatricopeptide repeat-containing protein At4g15720 OS=Momordica charantia OX=...	[more]
A0A6J1KGB2	2.2e-284	80.79	pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita maxima OX=366...	[more]

BLAST of Cmc11g0308411.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15720.1	5.2e-185	54.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G37170.1	2.6e-115	39.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G14050.1	1.1e-113	36.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	7.7e-112	37.08	mitochondrial editing factor 22	[more]
AT3G46790.1	1.1e-110	36.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 60..86 e-value: 0.011 score: 16.0 coord: 435..462 e-value: 0.0031 score: 17.7 coord: 192..217 e-value: 4.9E-5 score: 23.3 coord: 296..324 e-value: 7.2E-4 score: 19.6 coord: 366..390 e-value: 0.19 score: 12.0 coord: 161..191 e-value: 3.1E-4 score: 20.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 88..135 e-value: 2.2E-11 score: 43.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 161..192 e-value: 1.4E-5 score: 22.9 coord: 192..218 e-value: 7.7E-4 score: 17.5 coord: 60..85 e-value: 0.0017 score: 16.4 coord: 296..327 e-value: 1.5E-4 score: 19.7 coord: 91..124 e-value: 3.8E-6 score: 24.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 89..123 score: 11.169622
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 10.358486
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 190..224 score: 9.141782
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 290..517 e-value: 1.2E-29 score: 105.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 33..140 e-value: 2.2E-22 score: 81.3 coord: 141..250 e-value: 1.0E-19 score: 72.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 28..453
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 467..593 e-value: 4.9E-30 score: 104.0
None	No IPR available	PANTHER	PTHR47926:SF252	OS12G0163600 PROTEIN	coord: 30..582
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 30..582

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0308411	Cmc11g0308411	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308411.1-exon	Cmc11g0308411.1-exon-CMiso1.1chr11:29433648..29435459	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308411.1-cds	Cmc11g0308411.1-cds-CMiso1.1chr11:29433648..29435459	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0308411.1	Cmc11g0308411.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding