Cmc11g0307431.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307431.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Fatty acyl-CoA reductase
Location	CMiso1.1chr11: 28787405 .. 28791922 (-)
Sequence length	675
RNA-Seq Expression	Cmc11g0307431.1
Synteny	Cmc11g0307431.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATATTTTTAAACTTTTGTTGATATAAATGTATATTTACAATTTATAATTAGGTTTTGGAATTGGTGAACAAAGCATCATGCAATTGTTTGGAAGACAAATATAATGATCTCAAGAGGAAATTAAATTGGGTGATGAGACAAGTTCAACTTTATCGTCCATATTTCTTCTTCAAAGCCAGGTATTTTTACCAAACATTGGTTGTGCTGATTTTGATAAATCTTATGGAGAATTATTATGGTTAGAAAAGAAATGAAATTATTTAAAAAAGATAGCCCAAAAAACCTTGATAGGGTACATAGAGAACGATGAATTTTACTTTATTTTGTAAATAGCTTCAATATTTTACTATTTTTAAAAATTTTTCTATATTATATTTTATTCAACTTAATTAGTTTTATATTTTATAAATAAATTATCAAACATATTTCGAGTAAATTAGGATTTAATCTTTGAATCGTCTACCAAACTGACAACCTAAAATGCTACTATATATTTTAATTGAATCCTTTTCCACACAAAAATTAGTTAGTTTCCTTTATTATTAAATATACGAACAAATTTTATAAATAAAAAACTCCAAAGTAGGATGAGTTGATCCTTTTTGTTTTTTTTTTTGGAAAGAAAACCAAAGCTGAGCTTTAGAGTTATCTTAGCAAAGAGCTAGGTATTCTAAAGACTGCTTCGACCTATAAATTTATTCATGAAGAACATGGGCATAACAATATACATAGATAGAAGAGGCTTAAGATAAGCCAATTAACAACTAAAAATAGTCTTAAGATTTAAAGTTACCGTAGAAGATGAGTAGTTTCTAAACATCTTATCTTTTACAAGCCAAGTGGCAGTTTGGTTGCATATGGAGTCCCATATGGAGTCTGTTTCTTATGATGAGCCTTTAAAAATTCTTCTATTTCTTTCCAGCCAAATATTCCATATGAGAGTCACCAATATGTTGAATGAGATGATACCTCTTTTTGTCTTTGTTTTCTGGTTGATTATGAGAGAGATGGGAAAGTTGAGGTTGTCGAAGCTACCACTTTTGCTTAGGATATCATTTGTCTTGTGCCAGAGAAGAGAGGCTGTTTGGCAAGATAGAAAGATGTGGTTACTCGTCTCGCAATCTTTTCTACACATTACACACCAGTTTGGGTTTAGGCACATGGATTTCATCATCTTTTGGATTTTATCATTTGTTAGCAGGCCATCATTGATTATAGTCCAAAGCAAAACTTTACATTTTTTGGGAATGTTTGTTTTCCAAAGGTTTATGTAGGCTTGCTCATCTATATTTTGAGGGTGGGCTGACTGGTGTGTGTTTAAAGCATTCTTTACTGAACGGACAGAAAAACATTGGTTGCTATTTAGCTTCCATAATGGGGTATCTCTGCCATTTTGGTTTAGTGAGCTGGGCAAATTTAATTTGATCTCCCTACATTGTTCCTGTTCCCTATCATTTAGTTGTCTTCTTGGATTCAGATCCCAATCCTTTGTTCTGTCATTCCACATATCTTTGATAGATGCTTCTTTTGATTCAGAGAGAGCAAAAAGTCTAGGAAAACTATTTTTAAGGGTAGTGTTACCATTCCACTTGTGTTTCCAGAATGATAAGGATTCACCATTTTGAATTTTCCAATTTAAGTTTTCCTTGAACCAGCTGTATTTGCTTGTGATGGCCTTTCATGGGTCATTTGAGTTGCTGTATTTACTTTGTGTAGGCAAGTCTCCAATATATTCTTTTTCATATTTTGCATCAATGACTTTCCTCCAAAGAGCTTGTGGCTCATTGTGATATCTCCATAGCCATTTGTTGAGAAGAGCAAAATTTATTAATTCTATTGAGCTTATGTCGAGGCCTCCTTTTTCTTTTGGGAGAGTAGCTATCTTCCAAGAGACTGGATTCATGGACTTTTTTTCTGAGTCTTTAAGATAAGTATTTTCGAAGTTTTCTTTCCACAAGAAGTTTCTCCAATGTTTTTCTATCTCTTTACAGCAAGATTTTGGAGCTTTAAAAACTGAGTGTTGATATGTAGGAAGACTTGCTAAAGAGGAGTTGATCATCATTAGTCTACCTCCTTTGGAGATGAGTGCATACTTCCAGTTGTTTAGTTTTTTGTGGATCTATCATATAATGTTGTCCCAGAAAGCTCTTGTTCTTGGTTTGCTCTCAAGAGGCATCCCTAAGTATGACATGGGAAAGAACTGTGTGCTTATACCCCAACTTTTTGCCACTTTTTCAGATCTTTCTTTTCTTACATTTACATGGGTTATTGAAGACTTTGTGAGATTGATGTTTAGACCAGTGGCTGATTCAAAGAGGTGAATGGCAAACTGAAGGTTTCTGATGCTTTCATCCTCATCTTGCACAAAAAGAAGAATATCATCTGCAAAAAGAAGATGTGTGAGATTAATATCTTTGATGATTACTCCTTTGATCTTGTTTGAGTTCTCCAGATGTTTTAGCAGGCGGCTGAGGTAGTCCATAGCCAAAACAAAAATGAAGGGAGATATGAGATCTCCTTGTCTGATTCCTCTTTTCGGCTGTATCTTTCCACAAGGTTTTCCATTTATTATTATGGAGGATTGTATCGTTGTTATGCAGCTTTTTGTCCATCTTCTCCACTTTTTGGGAAATCTTTTTTTTTTCTAGAATGTAGTCTATGAAATCCCAATTGATTTTGTCAAAGGCTTTTGCTATGCCTATTTTAAAGACAACATTTGGTTTTTTGTTTTCTCCAGAGATCTATTGCTTCGTTTGCCGTCAGGATAGCATCTGTGATCTGCCTTTCTTTGACAAAAGCTAATTGATTTTCTGATATGGTGGTCTGCAGAACTTTTCTGAGTCTTGGTGAGAGGATTTTGGCTATGATTTTGTACAAAGACGTTGTCAAACTGATTGGTATGTAGTCGGCTGTAGTGATGCTCTTCTCCTTTTTGGCTATAAGGACAATGTAGGTTTCATTGGTGATCTTGTTGATTCTTGTATTTTGAAAAAAATCCTGAAACACTTTCATTACATCATTCTTAAAAATGTTCCAGAATTTTTTTAAAAATTCGATAGTGAATCCATCTGGGCCTGGTGCTTTGTTGCCTTCAAAGGAAAAGATGGCATTTCTAATTTCTTCTTCATTGAAAGGAGAAATGAGACACATCAAACTTTGTCTATAGGATTCCAATCAAGGTTTTCGATGAGCCAGTTTATCATATTGGTGGGGGTGTATAAGTCTTTGAAATGACATATAAAGGCCTTTTGGATGTCTTTATTATTGCTGTGATTTTTGCCCTCCTTGTCATAAACACCTGATATTTGGCTTCTTCTTCTTCTGGCAGTTCATACTTTATGGAAGAAGTTTGTATTTTCATCTCCCTTCTTGATCCATATTCTCTTAGCTCTTTGAGTCCAGTATTGAGCTTCCTTAATGGTGGCATTTTGGATATCAAGTTTGAGAATCTTCCTTCTGTCTGTGTCTTCTTTGGTTATACAATTTTGAGATTCCAATGCATCTATCTTTTCAATCTCAGCTCGCCAAAGGATTATATCTTGATCTTGAGCACATTTTTTTGTTATGTTGTCATGTTTTGGTCCTTTTTGCAAGCTATTTGAGCCTCAGCATAAAAGAGAACCCAGGGTGGCATTCCTGATGGATTTCTCCCCACCAATTTTCTATGATTGTATTGAGGTTGTCTTCTTTGATCCAAAGGTTGTTGAATCTGAAAGGTGTGGGGCCCCAAGGAAAAGAGGGAGCTTCTAGGACAACATGGAAGTGGTATGAGGTAATTCTTGTGAGAAGCCTACACTGGTGGCTTGAGAATCTCTATTCCCAATTTGGAGAAAAAAGGAATCTGTCTAACCTTGATAGCATTGGCACCTCTCTCAGGTTGGACCATGTGAAAAAGAACCATTGATCAGGGGGATCAATGAGCTGAGATCTTAGGATGAAAGTATTGAACTTTTTCATGCTGTATTTGGTTGGATTGGGGGAAGATGTTTTTGTATTCCATCTAAACACATTGAAATCTCCACCAATTATCCAGTTAAAACCGAAGAGGTTAGCTAAACCATCTAAATACATTGATTCTTTTTGTTTTGTTATTTTGAGTATGATTTTTTTTTTTAATTTAAAAGAAAAGAGATCACTTGTGGAATATTATTGAGGATGTTTGAAAAGTATTGGAAGATTTGTAATTTATTGTTACTCCATTTTTGGGCTCTTGACCTACTACTTATTGTGTATTATTATTATTATTTTGTTTTTGTATATATACAGATTTGATGACACCAACTTAGAAAAATTGGGAAGGGCTACACAACACAATGAAACAAATAGAGAGACACTTTTTTTTGACCCAAAGGATATCAATTGGGAAAATTACTTCCTCAATGTCCACATTCCTGGCCTTGTTAAGTATGTCCTCAAATAGAGTTATTAATTCTACCACTCTCTTACTTTTCTTTTTTTTCTCTCTTATCATAAAATTAAACGTCAATCTGTAATGGTTAATTTATTTATAGAGACT

mRNA sequence

ATATATTTTTAAACTTTTGTTGATATAAATGTATATTTACAATTTATAATTAGGTTTTGGAATTGGTGAACAAAGCATCATGCAATTGTTTGGAAGACAAATATAATGATCTCAAGAGGAAATTAAATTGGGTGATGAGACAAGTTCAACTTTATCGTCCATATTTCTTCTTCAAAGCCAGGTTGTTGAATCTGAAAGGTGTGGGGCCCCAAGGAAAAGAGGGAGCTTCTAGGACAACATGGAAGTGGTATGAGGTTGGACCATGTGAAAAAGAACCATTGATCAGGGGGATCAATGAGCTGAGATCTTAGGATGAAAGTATTGAACTTTTTCATGCTGTATTTGGTTGGATTGGGGGAAGATGTTTTTGTATTCCATCTAAACACATTGAAATCTCCACCAATTATCCAGTTAAAACCGAAGAGATTTGATGACACCAACTTAGAAAAATTGGGAAGGGCTACACAACACAATGAAACAAATAGAGAGACACTTTTTTTTGACCCAAAGGATATCAATTGGGAAAATTACTTCCTCAATGTCCACATTCCTGGCCTTGTTAAGTATGTCCTCAAATAGAGTTATTAATTCTACCACTCTCTTACTTTTCTTTTTTTTCTCTCTTATCATAAAATTAAACGTCAATCTGTAATGGTTAATTTATTTATAGAGACT

Coding sequence (CDS)

ATGAAAGTATTGAACTTTTTCATGCTGTATTTGGTTGGATTGGGGGAAGATGTTTTTGTATTCCATCTAAACACATTGAAATCTCCACCAATTATCCAGTTAAAACCGAAGAGATTTGATGACACCAACTTAGAAAAATTGGGAAGGGCTACACAACACAATGAAACAAATAGAGAGACACTTTTTTTTGACCCAAAGGATATCAATTGGGAAAATTACTTCCTCAATGTCCACATTCCTGGCCTTGTTAAGTATGTCCTCAAATAG

Protein sequence

MKVLNFFMLYLVGLGEDVFVFHLNTLKSPPIIQLKPKRFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK

Homology

[Close]

BLAST of Cmc11g0307431.1 vs. NCBI nr
Match: XP_004145802.2 (alcohol-forming fatty acyl-CoA reductase [Cucumis sativus] >KGN46961.2 hypothetical protein Csa_020782 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKLGRAT  NETNR+TLFFDPKDINWENYFLNVHIPGLVKYVLK
Sbjct: 504 RFDDTNLEKLGRATHENETNRDTLFFDPKDINWENYFLNVHIPGLVKYVLK 554

[Close]

BLAST of Cmc11g0307431.1 vs. NCBI nr
Match: XP_038902554.1 (fatty acyl-CoA reductase 3-like [Benincasa hispida])

HSP 1 Score: 97.4 bits (241), Expect = 6.4e-17
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTN EKLGR T+ NET+RETLF DPKDINWENYF+NVHIPGLVKYV+K
Sbjct: 442 RFDDTNFEKLGRPTRDNETDRETLFLDPKDINWENYFVNVHIPGLVKYVIK 492

[Close]

BLAST of Cmc11g0307431.1 vs. NCBI nr
Match: XP_022987017.1 (fatty acyl-CoA reductase 3-like [Cucurbita maxima])

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-12
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKL    + N  N+ TL  DPKDINWE+YFLN+H+PGLVKYV+K
Sbjct: 437 RFDDTNLEKLQMVARDNNINQNTLLLDPKDINWEDYFLNIHVPGLVKYVMK 487

[Close]

BLAST of Cmc11g0307431.1 vs. NCBI nr
Match: KAG6570487.1 (Fatty acyl-CoA reductase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-11
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 38   RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
            RFDDTNLEKL    + N  N  TL  DPKDINWE+YFLN+H+PGLVKYV++
Sbjct: 1274 RFDDTNLEKLQIVARDNNVNPNTLLLDPKDINWEDYFLNIHVPGLVKYVVE 1324

[Close]

BLAST of Cmc11g0307431.1 vs. NCBI nr
Match: XP_022944110.1 (fatty acyl-CoA reductase 3-like [Cucurbita moschata])

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-11
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKL    + N  N  TL  DPKDINWE+YFLN+H+PGLVKYV++
Sbjct: 437 RFDDTNLEKLQIVARDNNINPNTLLLDPKDINWEDYFLNIHVPGLVKYVVE 487

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy Swiss-Prot
Match: Q93ZB9 (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-08
Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 19  FVFHLNTLKSPPIIQLKPKRFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVH 78
           F+F L  L  P +       FDD+N EKL +         E  +FDPK ++W++YFLN H
Sbjct: 427 FIFRLVDLYQPYLFFY--GIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTH 486

Query: 79  IPGLVKYV 87
           + GL+KYV
Sbjct: 487 VIGLLKYV 492

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy Swiss-Prot
Match: Q9XGY7 (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.6e-08
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVL 88
           FDD N EKL  A + +    +  +FDP+ INWE+YFL  H PG+V++VL
Sbjct: 444 FDDMNTEKLRIAAKESIVEADMFYFDPRAINWEDYFLKTHFPGVVEHVL 492

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy Swiss-Prot
Match: Q9LXN3 (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRET--LF-FDPKDINWENYFLNVHIPGLVKYVLK 89
           FDDTN EKL    +  E N+E   LF FDPK I+WE+Y   +HIPGL+ YVLK
Sbjct: 442 FDDTNTEKL--RLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPGLITYVLK 492

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy Swiss-Prot
Match: Q39152 (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRETLF-FDPKDINWENYFLNVHIPGLVKYVLK 89
           FDD N E+L    + N    +  F FDPK I+W+NY  N HIPGL+ +VLK
Sbjct: 440 FDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHIPGLITHVLK 490

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy Swiss-Prot
Match: Q1PEI6 (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana OX=3702 GN=FAR8 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 8.9e-06
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRET----LFFDPKDINWENYFLNVHIPGLVKYVLK 89
           FDD N + L  A Q  E NR +      FDPK I W++Y +NVHIPGL+ +VLK
Sbjct: 443 FDDRNTKNL-CAKQKEEDNRNSENFMFDFDPKIIKWKDYLINVHIPGLITHVLK 495

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy TrEMBL
Match: A0A0A0KB44 (Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_6G152310 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.7e-20
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKLGRAT  NETNR+TLFFDPKDINWENYFLNVHIPGLVKYVLK
Sbjct: 443 RFDDTNLEKLGRATHENETNRDTLFFDPKDINWENYFLNVHIPGLVKYVLK 493

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy TrEMBL
Match: A0A6J1J966 (Fatty acyl-CoA reductase OS=Cucurbita maxima OX=3661 GN=LOC111484588 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKL    + N  N+ TL  DPKDINWE+YFLN+H+PGLVKYV+K
Sbjct: 437 RFDDTNLEKLQMVARDNNINQNTLLLDPKDINWEDYFLNIHVPGLVKYVMK 487

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy TrEMBL
Match: A0A6J1FYH0 (Fatty acyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111448658 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKL    + N  N  TL  DPKDINWE+YFLN+H+PGLVKYV++
Sbjct: 437 RFDDTNLEKLQIVARDNNINPNTLLLDPKDINWEDYFLNIHVPGLVKYVVE 487

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy TrEMBL
Match: A0A0A0KBS1 (Sterile domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G151800 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           FDDTN E+L R  Q+ +T  ET F DPKDINWE+YF+NVHIPGLVK++ K
Sbjct: 130 FDDTNAERLRRNIQNKDTETETFFLDPKDINWEDYFMNVHIPGLVKHIFK 179

[Close]

BLAST of Cmc11g0307431.1 vs. ExPASy TrEMBL
Match: A0A6J1FTJ1 (Fatty acyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111448659 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 38  RFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVHIPGLVKYVLK 89
           RFDDTNLEKL  A + N  N  T   DPKDINWE+YFLN+HIPGLVK+V+K
Sbjct: 866 RFDDTNLEKLRIAARDNNINPNTSLLDPKDINWEDYFLNIHIPGLVKHVMK 916

[Close]

BLAST of Cmc11g0307431.1 vs. TAIR 10
Match: AT4G33790.1 (Jojoba acyl CoA reductase-related male sterility protein )

HSP 1 Score: 57.8 bits (138), Expect = 5.2e-09
Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 19  FVFHLNTLKSPPIIQLKPKRFDDTNLEKLGRATQHNETNRETLFFDPKDINWENYFLNVH 78
           F+F L  L  P +       FDD+N EKL +         E  +FDPK ++W++YFLN H
Sbjct: 427 FIFRLVDLYQPYLFFY--GIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTH 486

Query: 79  IPGLVKYV 87
           + GL+KYV
Sbjct: 487 VIGLLKYV 492

[Close]

BLAST of Cmc11g0307431.1 vs. TAIR 10
Match: AT3G44540.1 (fatty acid reductase 4 )

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRET--LF-FDPKDINWENYFLNVHIPGLVKYVLK 89
           FDDTN EKL    +  E N+E   LF FDPK I+WE+Y   +HIPGL+ YVLK
Sbjct: 442 FDDTNTEKL--RLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPGLITYVLK 492

[Close]

BLAST of Cmc11g0307431.1 vs. TAIR 10
Match: AT5G22500.1 (fatty acid reductase 1 )

HSP 1 Score: 53.5 bits (127), Expect = 9.8e-08
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRETLF-FDPKDINWENYFLNVHIPGLVKYVLK 89
           FDD N E+L    + N    +  F FDPK I+W+NY  N HIPGL+ +VLK
Sbjct: 440 FDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHIPGLITHVLK 490

[Close]

BLAST of Cmc11g0307431.1 vs. TAIR 10
Match: AT3G44560.1 (fatty acid reductase 8 )

HSP 1 Score: 50.8 bits (120), Expect = 6.4e-07
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNETNRET----LFFDPKDINWENYFLNVHIPGLVKYVLK 89
           FDD N + L  A Q  E NR +      FDPK I W++Y +NVHIPGL+ +VLK
Sbjct: 443 FDDRNTKNL-CAKQKEEDNRNSENFMFDFDPKIIKWKDYLINVHIPGLITHVLK 495

[Close]

BLAST of Cmc11g0307431.1 vs. TAIR 10
Match: AT3G44550.1 (fatty acid reductase 5 )

HSP 1 Score: 47.0 bits (110), Expect = 9.2e-06
Identity = 26/53 (49.06%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 39  FDDTNLEKLGRATQHNE-TNRETLF--FDPKDINWENYFLNVHIPGLVKYVLK 89
           FDD N + L    +  E  N E L   FDPK INW +Y  N+HI GLV +VLK
Sbjct: 443 FDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGDYLTNIHISGLVTHVLK 495

The following BLAST results are available for this feature:

BLAST of Cmc11g0307431.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145802.2	1.8e-19	94.12	alcohol-forming fatty acyl-CoA reductase [Cucumis sativus] >KGN46961.2 hypotheti...	[more]
XP_038902554.1	6.4e-17	84.31	fatty acyl-CoA reductase 3-like [Benincasa hispida]	[more]
XP_022987017.1	2.1e-12	68.63	fatty acyl-CoA reductase 3-like [Cucurbita maxima]	[more]
KAG6570487.1	2.3e-11	66.67	Fatty acyl-CoA reductase 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944110.1	3.1e-11	66.67	fatty acyl-CoA reductase 3-like [Cucurbita moschata]	[more]

BLAST of Cmc11g0307431.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZB9	7.3e-08	41.18	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana OX=3702 GN=FAR3 PE=1 SV=1	[more]
Q9XGY7	9.6e-08	48.98	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis OX=3999 PE=1 SV...	[more]
Q9LXN3	1.6e-07	56.60	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1...	[more]
Q39152	1.4e-06	49.02	Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1	[more]
Q1PEI6	8.9e-06	50.00	Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana OX=3702 GN=FAR8 PE=1 SV=1	[more]

BLAST of Cmc11g0307431.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB44	8.7e-20	94.12	Fatty acyl-CoA reductase OS=Cucumis sativus OX=3659 GN=Csa_6G152310 PE=3 SV=1	[more]
A0A6J1J966	1.0e-12	68.63	Fatty acyl-CoA reductase OS=Cucurbita maxima OX=3661 GN=LOC111484588 PE=3 SV=1	[more]
A0A6J1FYH0	1.5e-11	66.67	Fatty acyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111448658 PE=3 SV=1	[more]
A0A0A0KBS1	1.9e-11	66.00	Sterile domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G151800 PE=...	[more]
A0A6J1FTJ1	1.9e-11	68.63	Fatty acyl-CoA reductase OS=Cucurbita moschata OX=3662 GN=LOC111448659 PE=3 SV=1	[more]

BLAST of Cmc11g0307431.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33790.1	5.2e-09	41.18	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G44540.1	1.2e-08	56.60	fatty acid reductase 4	[more]
AT5G22500.1	9.8e-08	49.02	fatty acid reductase 1	[more]
AT3G44560.1	6.4e-07	50.00	fatty acid reductase 8	[more]
AT3G44550.1	9.2e-06	49.06	fatty acid reductase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033640	Fatty acyl-CoA reductase, C-terminal	PFAM	PF03015	Sterile	coord: 38..88 e-value: 7.8E-11 score: 42.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0307431	Cmc11g0307431	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307431.1-exon	Cmc11g0307431.1-exon-CMiso1.1chr11:28787405..28787654	exon
Cmc11g0307431.1-exon	Cmc11g0307431.1-exon-CMiso1.1chr11:28787874..28788044	exon
Cmc11g0307431.1-exon	Cmc11g0307431.1-exon-CMiso1.1chr11:28788149..28788221	exon
Cmc11g0307431.1-exon	Cmc11g0307431.1-exon-CMiso1.1chr11:28791742..28791922	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307431.1-three_prime_utr	Cmc11g0307431.1-three_prime_utr-CMiso1.1chr11:28787405..28787500	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307431.1-cds	Cmc11g0307431.1-cds-CMiso1.1chr11:28787501..28787654	CDS
Cmc11g0307431.1-cds	Cmc11g0307431.1-cds-CMiso1.1chr11:28787874..28787986	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307431.1-five_prime_utr	Cmc11g0307431.1-five_prime_utr-CMiso1.1chr11:28787987..28788044	five_prime_UTR
Cmc11g0307431.1-five_prime_utr	Cmc11g0307431.1-five_prime_utr-CMiso1.1chr11:28788149..28788221	five_prime_UTR
Cmc11g0307431.1-five_prime_utr	Cmc11g0307431.1-five_prime_utr-CMiso1.1chr11:28791742..28791922	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307431.1	Cmc11g0307431.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035336	long-chain fatty-acyl-CoA metabolic process
biological_process	GO:0010345	suberin biosynthetic process
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0102965	alcohol-forming fatty acyl-CoA reductase activity
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity