Cmc11g0307141.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0307141.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 28606731 .. 28609032 (+)
Sequence length	2302
RNA-Seq Expression	Cmc11g0307141.1
Synteny	Cmc11g0307141.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAATTAATGTTTGACGAAATTAGTATTTTGATTTTTAAATTGTTTAGAGACTAAGTTGATTCGTAGAGAACAATGAATCGAGTGAGACATATATCTAATAGAAATTGGATAAACTATCTGATGATGTAAAGAAATGCAAGAATAGCCTCAACGCTAATTTTTATTCGTCTAAAAAAAAAAAAAACACTAAGAAAAAGAATAATCTACAAGAGAGAAAAAAATTGTCAGAATGATATTATCCGGGACCCAGTCACAACACGCCACGTAAGAACATGATCCCGAACAAAGAGCACCTCCAAACGGTACGAACAAAACGCCACGATCAACGTCGTTTTAAGCACAACCGCATATCTAAATCCATCCACATGACATACATACATATACGTATTTTAAATATATATCTTTATTTTACAATTTTCTTAGTCCCGTCCACCGCCGCTGTTCGCGTTTACCAACCACCACCGCCGCCAACGACGCTGCCGCCAAGACTTTTGGACCAATCAAACGGCGGCTCAGATCGAAACGAAAAAAACGGAAAACAAAATAGAAGGCGGATTTTGGCAATAATCTGGAATATTCTTCTTCCTCTCCGGCCGTCCTTTTATGTGAAATTTTGATCGGCGATATGTGATTTGTTCTGCTAATGGCCGCCGGAGGGGGACCACGGAGTCATGTCCATTGGATAACTTCCCAAGACTCTAAGGAAGGATGTGAACTCCTGTACTTCTGCTAGGGCGTTTTGTGCCCTAGTTTCAGCCATGGAAGCTTCAAAATCAACGTAGAACATGTACTCGAAATGCTTGGCAGTGCCGACGTTAGCGTCGTCAACGAGACGGATAGGGCAATTTCTGTGAGGCCGGGACTCGATCTTCGTCAAACTAATGTTGCGGAAGGCAAAAGCGGAAAGTACCTTGAATAGCGCGGATGTTCCTTTATCGTGAGCGAAGACGATGCTGGTTTTGAACGGCCGATCTGTTCGGGGTATAATCGGATCTCGAGCTAGCATAACAAATCGCGTCACGTTACTCGAATCGTCCTGGATTCCATCCGCTATGACCTGGAGACCGTACAGTTCCGCTGCGCGTGCACTCGCAATCGCCGCCGTATTGAGGAGATTGTTCGCTGCGATGTATTCTGCCGCGCCGGCGGTATCGTCGACAGCCTCTCGAGTCACATTGAGCCCTAATTTCGTCAAAGTAAGCTCGCATTGAGCTAGGGCTTGGGGATGAGAAATAACCCGGCTCAAATACTCTTTACGGACTCCAGGAAGAGCCAGAAGGCAGTGGTGAACCGGAAATTGAACCTCACCAACAATGTGCAGCCGATGACGAAGCAGGAGATCATAATTTCTATGAATCGAACCGCCAAGCGAGTTTTCAACCGGAAGCACCGCTCGATCAGCGATCCATAACTCCACCGCTTGAAAAGCCACCTCGAATTGATCGCAAGGAATAGCCTCACAATTAGGATACGCCTTTCCGGCAGCGGCTTCAGAGTAAGCCCCCGGAACACCCTGGTAAGCCACACGAAGCTTCTCACCGTGCATCGGAGCTGGAGAAAAATCGGTAATCGTGAGTGGCTTAGGTTGCGGCTTGGTTATTTGATAGGTATCAGAAATTTTCCCAATCGGAACAAGATTAAGATTCTCAACATTCGTCTTGTGACCATTAACCGACGCAACAACTCCCCCACCGCCTCCACCGGCAGATTTATCGGCAGATTGTTGCTGAGAAACAACGTTACTGGCAAGAATAGCACATGAGCTTTGCCAATCCGCTCGTGAGAGGCCAACGCCGTTTTGGACGCTGAAAGTTTCAGGTCCATAGGCACATTGGACAGCGACGGAATGAAACGGTAACAGACGGGGAAAGAATGGACGGCGAACGAAGGTACTGAAGGACGGCGCCGGAGAATAAGGACTCAGAGCCTTCATAGCTAGAAAATGAAGAAGAAGAAGAAGAAAGAAGAAAGAAGAAAGAAGAAGAAGGCTCAGCTTGGTGTTCACTTGAAAAAGAGAACCACAAGCTGAGGAAGAAGAAGAAATGATCGTAGGGTATATATATCTCAAGAGAAAGGGGTTGGAATCATTCAGTTTATTATTTTCTTTAAAAAGAAAGGGTTAAAAAAAAAGGGTATTTCTTGAACTGATGGTTTACTGCATTGAAAAGTAGTAGTTGTTTTCTTGGGTCCATATTGGTGGATCGGTCGTTCTCATACCTACCCCCACCCCCCAATTATTATATAATGGAACATAATTTAATATATATATTTTTTTCTTTTTTAAATCTGAATAAAACAA

mRNA sequence

GTAAAATTAATGTTTGACGAAATTAGTATTTTGATTTTTAAATTGTTTAGAGACTAAGTTGATTCGTAGAGAACAATGAATCGAGTGAGACATATATCTAATAGAAATTGGATAAACTATCTGATGATGTAAAGAAATGCAAGAATAGCCTCAACGCTAATTTTTATTCGTCTAAAAAAAAAAAAAACACTAAGAAAAAGAATAATCTACAAGAGAGAAAAAAATTGTCAGAATGATATTATCCGGGACCCAGTCACAACACGCCACGTAAGAACATGATCCCGAACAAAGAGCACCTCCAAACGGTACGAACAAAACGCCACGATCAACGTCGTTTTAAGCACAACCGCATATCTAAATCCATCCACATGACATACATACATATACGTATTTTAAATATATATCTTTATTTTACAATTTTCTTAGTCCCGTCCACCGCCGCTGTTCGCGTTTACCAACCACCACCGCCGCCAACGACGCTGCCGCCAAGACTTTTGGACCAATCAAACGGCGGCTCAGATCGAAACGAAAAAAACGGAAAACAAAATAGAAGGCGGATTTTGGCAATAATCTGGAATATTCTTCTTCCTCTCCGGCCGTCCTTTTATGTGAAATTTTGATCGGCGATATGTGATTTGTTCTGCTAATGGCCGCCGGAGGGGGACCACGGAGTCATGTCCATTGGATAACTTCCCAAGACTCTAAGGAAGGATGTGAACTCCTGTACTTCTGCTAGGGCGTTTTGTGCCCTAGTTTCAGCCATGGAAGCTTCAAAATCAACGTAGAACATGTACTCGAAATGCTTGGCAGTGCCGACGTTAGCGTCGTCAACGAGACGGATAGGGCAATTTCTGTGAGGCCGGGACTCGATCTTCGTCAAACTAATGTTGCGGAAGGCAAAAGCGGAAAGTACCTTGAATAGCGCGGATGTTCCTTTATCGTGAGCGAAGACGATGCTGGTTTTGAACGGCCGATCTGTTCGGGGTATAATCGGATCTCGAGCTAGCATAACAAATCGCGTCACGTTACTCGAATCGTCCTGGATTCCATCCGCTATGACCTGGAGACCGTACAGTTCCGCTGCGCGTGCACTCGCAATCGCCGCCGTATTGAGGAGATTGTTCGCTGCGATGTATTCTGCCGCGCCGGCGGTATCGTCGACAGCCTCTCGAGTCACATTGAGCCCTAATTTCGTCAAAGTAAGCTCGCATTGAGCTAGGGCTTGGGGATGAGAAATAACCCGGCTCAAATACTCTTTACGGACTCCAGGAAGAGCCAGAAGGCAGTGGTGAACCGGAAATTGAACCTCACCAACAATGTGCAGCCGATGACGAAGCAGGAGATCATAATTTCTATGAATCGAACCGCCAAGCGAGTTTTCAACCGGAAGCACCGCTCGATCAGCGATCCATAACTCCACCGCTTGAAAAGCCACCTCGAATTGATCGCAAGGAATAGCCTCACAATTAGGATACGCCTTTCCGGCAGCGGCTTCAGAGTAAGCCCCCGGAACACCCTGGTAAGCCACACGAAGCTTCTCACCGTGCATCGGAGCTGGAGAAAAATCGGTAATCGTGAGTGGCTTAGGTTGCGGCTTGGTTATTTGATAGGTATCAGAAATTTTCCCAATCGGAACAAGATTAAGATTCTCAACATTCGTCTTGTGACCATTAACCGACGCAACAACTCCCCCACCGCCTCCACCGGCAGATTTATCGGCAGATTGTTGCTGAGAAACAACGTTACTGGCAAGAATAGCACATGAGCTTTGCCAATCCGCTCGTGAGAGGCCAACGCCGTTTTGGACGCTGAAAGTTTCAGGTCCATAGGCACATTGGACAGCGACGGAATGAAACGGTAACAGACGGGGAAAGAATGGACGGCGAACGAAGGTACTGAAGGACGGCGCCGGAGAATAAGGACTCAGAGCCTTCATAGCTAGAAAATGAAGAAGAAGAAGAAGAAAGAAGAAAGAAGAAAGAAGAAGAAGGCTCAGCTTGGTGTTCACTTGAAAAAGAGAACCACAAGCTGAGGAAGAAGAAGAAATGATCGTAGGGTATATATATCTCAAGAGAAAGGGGTTGGAATCATTCAGTTTATTATTTTCTTTAAAAAGAAAGGGTTAAAAAAAAAGGGTATTTCTTGAACTGATGGTTTACTGCATTGAAAAGTAGTAGTTGTTTTCTTGGGTCCATATTGGTGGATCGGTCGTTCTCATACCTACCCCCACCCCCCAATTATTATATAATGGAACATAATTTAATATATATATTTTTTTCTTTTTTAAATCTGAATAAAACAA

Coding sequence (CDS)

ATGATCCCGAACAAAGAGCACCTCCAAACGGTACGAACAAAACGCCACGATCAACGTCGTTTTAAGCACAACCGCATATCTAAATCCATCCACATGACATACATACATATACGTATTTTAAATATATATCTTTATTTTACAATTTTCTTAGTCCCGTCCACCGCCGCTGTTCGCGTTTACCAACCACCACCGCCGCCAACGACGCTGCCGCCAAGACTTTTGGACCAATCAAACGGCGGCTCAGATCGAAACGAAAAAAACGGAAAACAAAATAGAAGGCGGATTTTGGCAATAATCTGGAATATTCTTCTTCCTCTCCGGCCGTCCTTTTATGTGAAATTTTGA

Protein sequence

MIPNKEHLQTVRTKRHDQRRFKHNRISKSIHMTYIHIRILNIYLYFTIFLVPSTAAVRVYQPPPPPTTLPPRLLDQSNGGSDRNEKNGKQNRRRILAIIWNILLPLRPSFYVKF

Homology

The following BLAST results are available for this feature:

BLAST of Cmc11g0307141.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0307141.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0307141.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0307141.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..89

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0307141	Cmc11g0307141	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307141.1-exon	Cmc11g0307141.1-exon-CMiso1.1chr11:28606731..28609032	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307141.1-five_prime_utr	Cmc11g0307141.1-five_prime_utr-CMiso1.1chr11:28606731..28607005	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307141.1-cds	Cmc11g0307141.1-cds-CMiso1.1chr11:28607006..28607350	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307141.1-three_prime_utr	Cmc11g0307141.1-three_prime_utr-CMiso1.1chr11:28607351..28609032	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0307141.1	Cmc11g0307141.1-protein	polypeptide