Cmc11g0306521.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0306521.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Alpha-L-fucosidase
Location	CMiso1.1chr11: 28008196 .. 28009076 (+)
Sequence length	881
RNA-Seq Expression	Cmc11g0306521.1
Synteny	Cmc11g0306521.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTTGAACTTTAAGACGAAGGAACTGAACTAATGCTGAGATATTTAACAACTCCTTTGGTAAGGACGGTCAGCGCAAGAGCTTGAACAGTGAAGTTTAATGGCGGATGGTGATCCATAAAGCCTCCTACTCCCACTCCCACTCGATCAAATTCCAAAATCCCTTCTCTTCCGATGAAGAATCACAATATCATATTCTTCACCAACTGCAATTTCCCTTTACCCTTTTCGCTTCTCAATTCAATTTCATCGTTCTCTCTCTTCTTCCTCCTCTCTCTTTTTCTTCAACCAATTTCTACTTCTTCTTCTTCTTCTTTGATTAACAATCCTCCTCCGCTTCCCATTCTTCCCATCCCCTCCGCTAGTCAGATCCAATGGCAACTCGGAAACATGGCTCTATTCCTTCATTTTGGCCCAAACACGTTCACTGATTCCGAATGGGGAACTGGCCACGCTCACCCATCTGTCTTCAACCCCATCAATCTCGATGCTGCTCAATGGGTCCGAGTCGCCAAGGACGCCGGGTTTTCTCGTATCATTCTCACTGCGAAGCATCACGATGGGTTCTGCTTATGGCCGTCGGAGTATACAAATTATTCAGTGAGCTCGAGCCCTTGGAGAAATGGCAAAGGAGATGTGGTTGGGGAACTCGCCAAGGCTGCTAAAGAAGCGGGACTTGGATTGGGTCTCTATCTGTCCCCATGGGATCGTCACGAGTCATGTTATGGTAAAACTCTGGAATATAATGAATTCTATCTTGGGCAAATGACTGAACTGCTTACCAGGTAGTGGTTCTTGGTTCTTTGCATTTTTTTTTTCTCTTAAATTGTTCGACGAATTGCTTCTTTTGTTATTTGACGTAGATGGGTAAATTTTTATC

mRNA sequence

CTTGTTTGAACTTTAAGACGAAGGAACTGAACTAATGCTGAGATATTTAACAACTCCTTTGGTAAGGACGGTCAGCGCAAGAGCTTGAACAGTGAAGTTTAATGGCGGATGGTGATCCATAAAGCCTCCTACTCCCACTCCCACTCGATCAAATTCCAAAATCCCTTCTCTTCCGATGAAGAATCACAATATCATATTCTTCACCAACTGCAATTTCCCTTTACCCTTTTCGCTTCTCAATTCAATTTCATCGTTCTCTCTCTTCTTCCTCCTCTCTCTTTTTCTTCAACCAATTTCTACTTCTTCTTCTTCTTCTTTGATTAACAATCCTCCTCCGCTTCCCATTCTTCCCATCCCCTCCGCTAGTCAGATCCAATGGCAACTCGGAAACATGGCTCTATTCCTTCATTTTGGCCCAAACACGTTCACTGATTCCGAATGGGGAACTGGCCACGCTCACCCATCTGTCTTCAACCCCATCAATCTCGATGCTGCTCAATGGGTCCGAGTCGCCAAGGACGCCGGGTTTTCTCGTATCATTCTCACTGCGAAGCATCACGATGGGTTCTGCTTATGGCCGTCGGAGTATACAAATTATTCAGTGAGCTCGAGCCCTTGGAGAAATGGCAAAGGAGATGTGGTTGGGGAACTCGCCAAGGCTGCTAAAGAAGCGGGACTTGGATTGGGTCTCTATCTGTCCCCATGGGATCGTCACGAGTCATGTTATGGTAAAACTCTGGAATATAATGAATTCTATCTTGGGCAAATGACTGAACTGCTTACCAGGTAGTGGTTCTTGGTTCTTTGCATTTTTTTTTTCTCTTAAATTGTTCGACGAATTGCTTCTTTTGTTATTTGACGTAGATGGGTAAATTTTTATC

Coding sequence (CDS)

ATGAAGAATCACAATATCATATTCTTCACCAACTGCAATTTCCCTTTACCCTTTTCGCTTCTCAATTCAATTTCATCGTTCTCTCTCTTCTTCCTCCTCTCTCTTTTTCTTCAACCAATTTCTACTTCTTCTTCTTCTTCTTTGATTAACAATCCTCCTCCGCTTCCCATTCTTCCCATCCCCTCCGCTAGTCAGATCCAATGGCAACTCGGAAACATGGCTCTATTCCTTCATTTTGGCCCAAACACGTTCACTGATTCCGAATGGGGAACTGGCCACGCTCACCCATCTGTCTTCAACCCCATCAATCTCGATGCTGCTCAATGGGTCCGAGTCGCCAAGGACGCCGGGTTTTCTCGTATCATTCTCACTGCGAAGCATCACGATGGGTTCTGCTTATGGCCGTCGGAGTATACAAATTATTCAGTGAGCTCGAGCCCTTGGAGAAATGGCAAAGGAGATGTGGTTGGGGAACTCGCCAAGGCTGCTAAAGAAGCGGGACTTGGATTGGGTCTCTATCTGTCCCCATGGGATCGTCACGAGTCATGTTATGGTAAAACTCTGGAATATAATGAATTCTATCTTGGGCAAATGACTGAACTGCTTACCAGGTAG

Protein sequence

MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHESCYGKTLEYNEFYLGQMTELLTR

Homology

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BLAST of Cmc11g0306521.1 vs. NCBI nr
Match: XP_008465351.1 (PREDICTED: alpha-L-fucosidase 1 [Cucumis melo] >KAA0035226.1 alpha-L-fucosidase 1 [Cucumis melo var. makuwa] >TYK22379.1 alpha-L-fucosidase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 3.1e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60
           MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI
Sbjct: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60

Query: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120
           PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR
Sbjct: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120

Query: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180
           IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH
Sbjct: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180

Query: 181 ESCYGKTLEYNEFYLGQMTELLTR 205
           ESCYGKTLEYNEFYLGQMTELLTR
Sbjct: 181 ESCYGKTLEYNEFYLGQMTELLTR 204

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BLAST of Cmc11g0306521.1 vs. NCBI nr
Match: XP_004145759.1 (alpha-L-fucosidase 1 [Cucumis sativus] >KGN46870.1 hypothetical protein Csa_020591 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 8.4e-113
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60
           MKNHNIIFFTNCNFP PFSLLN ISSFSLFFLLSLFLQP+S+SSSSSLINNPPPLPILPI
Sbjct: 1   MKNHNIIFFTNCNFPKPFSLLNLISSFSLFFLLSLFLQPVSSSSSSSLINNPPPLPILPI 60

Query: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120
           PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGH HPSVFNPINLDAAQWVRVAKDAGFSR
Sbjct: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVHPSVFNPINLDAAQWVRVAKDAGFSR 120

Query: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180
           IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH
Sbjct: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180

Query: 181 ESCYGKTLEYNEFYLGQMTELLTR 205
           ESCYGKTLEYNEFYLGQMTELLTR
Sbjct: 181 ESCYGKTLEYNEFYLGQMTELLTR 204

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BLAST of Cmc11g0306521.1 vs. NCBI nr
Match: XP_038901722.1 (alpha-L-fucosidase 1-like [Benincasa hispida] >XP_038902551.1 alpha-L-fucosidase 1-like [Benincasa hispida])

HSP 1 Score: 377.5 bits (968), Expect = 7.4e-101
Identity = 182/203 (89.66%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 2   KNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPIP 61
           K H I FF++CN P PFS LNSISSF LFFLLSLFLQPI   SSSSLIN+PPPLPILPIP
Sbjct: 3   KKHTISFFSHCNIPKPFSALNSISSFPLFFLLSLFLQPI---SSSSLINSPPPLPILPIP 62

Query: 62  SASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSRI 121
           SASQIQWQLGNMALFLHFGPNTFTDSEWGTGHA P +FNP NLDAAQWVRVAKDAGFS +
Sbjct: 63  SASQIQWQLGNMALFLHFGPNTFTDSEWGTGHADPFIFNPTNLDAAQWVRVAKDAGFSHL 122

Query: 122 ILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHE 181
           ILTAKHHDGFCLWPSEYT YSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHE
Sbjct: 123 ILTAKHHDGFCLWPSEYTKYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHE 182

Query: 182 SCYGKTLEYNEFYLGQMTELLTR 205
           SCYGKTLEYNEFY GQMTELLTR
Sbjct: 183 SCYGKTLEYNEFYAGQMTELLTR 202

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BLAST of Cmc11g0306521.1 vs. NCBI nr
Match: XP_022944007.1 (alpha-L-fucosidase 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 173/206 (83.98%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 2   KNHNIIFFTNC-NFPLPFSLLNSIS--SFSLFFLLSLFLQPISTSSSSSLINNPPPLPIL 61
           K   I FF  C N P P S +NSIS    S+ FLLSL LQPIS+SSSS  I++PPPLPIL
Sbjct: 3   KKPAIRFFGYCNNIPKPSSAINSISQTQISIVFLLSLLLQPISSSSSS--ISSPPPLPIL 62

Query: 62  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGF 121
           PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGH  PSVFNP NLDAAQWVRVAKDAGF
Sbjct: 63  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVDPSVFNPTNLDAAQWVRVAKDAGF 122

Query: 122 SRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWD 181
           SR+ILTAKHHDGFCLWPSEYTNYSV SSPWRNG+GDVVGELAKAAKEAGLGLGLYLSPWD
Sbjct: 123 SRLILTAKHHDGFCLWPSEYTNYSVRSSPWRNGEGDVVGELAKAAKEAGLGLGLYLSPWD 182

Query: 182 RHESCYGKTLEYNEFYLGQMTELLTR 205
           RHE CYG TLEYNEFY+GQMTELLTR
Sbjct: 183 RHEPCYGNTLEYNEFYVGQMTELLTR 206

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BLAST of Cmc11g0306521.1 vs. NCBI nr
Match: KAG6570812.1 (Alpha-L-fucosidase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.7 bits (883), Expect = 5.3e-91
Identity = 172/206 (83.50%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 2   KNHNIIFFTNC-NFPLPFSLLNSIS--SFSLFFLLSLFLQPISTSSSSSLINNPPPLPIL 61
           K   I FF  C N P P S LNSIS    S+ FLLSL LQPIS+SSSS  I++PPPLPIL
Sbjct: 3   KKQAIRFFGYCNNIPKPSSALNSISQTQISIVFLLSLLLQPISSSSSS--ISSPPPLPIL 62

Query: 62  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGF 121
           PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGH  PS FNP NLDAAQWVRVAKDAGF
Sbjct: 63  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVDPSAFNPTNLDAAQWVRVAKDAGF 122

Query: 122 SRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWD 181
           SR+ILTAKHHDGFCLWPSEYTNYSV SSPWR+G+GDVVGELAKAAKEAGLGLGLYLSPWD
Sbjct: 123 SRLILTAKHHDGFCLWPSEYTNYSVRSSPWRDGEGDVVGELAKAAKEAGLGLGLYLSPWD 182

Query: 182 RHESCYGKTLEYNEFYLGQMTELLTR 205
           RHE CYG TLEYNEFY+GQMTELLTR
Sbjct: 183 RHEPCYGNTLEYNEFYVGQMTELLTR 206

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BLAST of Cmc11g0306521.1 vs. ExPASy Swiss-Prot
Match: Q8GW72 (Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-77
Identity = 134/180 (74.44%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 25  SSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPIPSASQIQWQLGNMALFLHFGPNTF 84
           S  +LFF     L     S+SSSL+  P P PILP+PS+ Q+QWQLG+MA+FLHFGPNTF
Sbjct: 3   SQITLFFFFFSILSLSQISNSSSLL-KPHPCPILPLPSSQQLQWQLGSMAMFLHFGPNTF 62

Query: 85  TDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSEYTNYSVS 144
           TDSEWGTG A+PS+FNP +L+A+QWV++AKD+GFSR+ILTAKHHDGFCLWPSEYT+YSV 
Sbjct: 63  TDSEWGTGKANPSIFNPTHLNASQWVQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVK 122

Query: 145 SSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHESCYGKTLEYNEFYLGQMTELLTR 204
           SS WRNG GDVV ELA AAKEAG+GLGLYLSPWDRHE CYGKTLEYNEFYL QMTELLT+
Sbjct: 123 SSQWRNGAGDVVAELASAAKEAGIGLGLYLSPWDRHEQCYGKTLEYNEFYLSQMTELLTK 181

[Close]

BLAST of Cmc11g0306521.1 vs. ExPASy Swiss-Prot
Match: Q7XUR3 (Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-66
Identity = 112/160 (70.00%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 45  SSSLINNPPPLPILPIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINL 104
           + S    PPPLP+LP+PS +Q+QWQL  MALFLHFGPNTFTDSEWG+  A P+VF P  L
Sbjct: 24  TGSAAPTPPPLPVLPVPSYAQLQWQLSEMALFLHFGPNTFTDSEWGSVRADPAVFAPSAL 83

Query: 105 DAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAK 164
           DA QW R A   GF R++LTAKHHDGFCLWPS  TNYSV++SPW+ G GDVVGELA AA+
Sbjct: 84  DAGQWARAAAAGGFGRVVLTAKHHDGFCLWPSALTNYSVAASPWKGGAGDVVGELAAAAR 143

Query: 165 EAGLGLGLYLSPWDRHESCYGKTLEYNEFYLGQMTELLTR 205
             G+GLGLYLSPWDRHE  YG T+ YNE YLGQMTELLTR
Sbjct: 144 AEGIGLGLYLSPWDRHEPVYGDTVAYNEHYLGQMTELLTR 183

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BLAST of Cmc11g0306521.1 vs. ExPASy Swiss-Prot
Match: P10901 (Alpha-L-fucosidase OS=Dictyostelium discoideum OX=44689 GN=alfA PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 105 DAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKG-DVVGELAKAA 164
           DA +W  + + +G   ++LT+KHH+G+ LW SE    S + +    G G D+VGEL K+ 
Sbjct: 106 DANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE---QSWNWNSVETGPGIDIVGELTKSV 165

Query: 165 KEAGLGLGLYLSPWDRHESCY 185
           K  GL +GLY S ++     Y
Sbjct: 166 KNMGLHMGLYHSLFEWFNPLY 183

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BLAST of Cmc11g0306521.1 vs. ExPASy Swiss-Prot
Match: Q9VTJ4 (Putative alpha-L-fucosidase OS=Drosophila melanogaster OX=7227 GN=Fuca PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 97  SVFNPINLDAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSE--YTNYSVSSSPWRNGKGD 156
           S F     +A +W  + KD+G   ++LT+KHHDGF LWPS+  Y   S+   P    K D
Sbjct: 105 SQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVGP----KRD 164

Query: 157 VVGELAKA-AKEAGLGLGLYLS 176
           +V ELA A  KE+ L  GLY S
Sbjct: 165 IVKELAAAIRKESDLRFGLYYS 182

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BLAST of Cmc11g0306521.1 vs. ExPASy Swiss-Prot
Match: C3YWU0 (Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-08
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 99  FNPINLDAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSEYT-NY-SVSSSPWRNGKGDVV 158
           +NP+     QW  V + +G   ++LT+KHH+GF  WPS+Y+ N+ SV + P R    D+V
Sbjct: 97  YNPL-----QWAEVLQASGAKYVVLTSKHHEGFTNWPSKYSWNWNSVDNGPHR----DLV 156

Query: 159 GELAKAAK-EAGLGLGLYLSPWDRHESCYGK 187
           GELA A +  + L  GLY S ++     Y K
Sbjct: 157 GELAMAIRNNSDLHFGLYYSLFEWFHPLYLK 178

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BLAST of Cmc11g0306521.1 vs. ExPASy TrEMBL
Match: A0A5D3DGJ8 (Alpha-L-fucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00020 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60
           MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI
Sbjct: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60

Query: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120
           PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR
Sbjct: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120

Query: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180
           IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH
Sbjct: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180

Query: 181 ESCYGKTLEYNEFYLGQMTELLTR 205
           ESCYGKTLEYNEFYLGQMTELLTR
Sbjct: 181 ESCYGKTLEYNEFYLGQMTELLTR 204

[Close]

BLAST of Cmc11g0306521.1 vs. ExPASy TrEMBL
Match: A0A1S3CNP1 (Alpha-L-fucosidase OS=Cucumis melo OX=3656 GN=LOC103502990 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60
           MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI
Sbjct: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60

Query: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120
           PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR
Sbjct: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120

Query: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180
           IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH
Sbjct: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180

Query: 181 ESCYGKTLEYNEFYLGQMTELLTR 205
           ESCYGKTLEYNEFYLGQMTELLTR
Sbjct: 181 ESCYGKTLEYNEFYLGQMTELLTR 204

[Close]

BLAST of Cmc11g0306521.1 vs. ExPASy TrEMBL
Match: A0A0A0KAV7 (Alpha-L-fucosidase OS=Cucumis sativus OX=3659 GN=Csa_6G147630 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.1e-113
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MKNHNIIFFTNCNFPLPFSLLNSISSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPI 60
           MKNHNIIFFTNCNFP PFSLLN ISSFSLFFLLSLFLQP+S+SSSSSLINNPPPLPILPI
Sbjct: 1   MKNHNIIFFTNCNFPKPFSLLNLISSFSLFFLLSLFLQPVSSSSSSSLINNPPPLPILPI 60

Query: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSR 120
           PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGH HPSVFNPINLDAAQWVRVAKDAGFSR
Sbjct: 61  PSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVHPSVFNPINLDAAQWVRVAKDAGFSR 120

Query: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180
           IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH
Sbjct: 121 IILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRH 180

Query: 181 ESCYGKTLEYNEFYLGQMTELLTR 205
           ESCYGKTLEYNEFYLGQMTELLTR
Sbjct: 181 ESCYGKTLEYNEFYLGQMTELLTR 204

[Close]

BLAST of Cmc11g0306521.1 vs. ExPASy TrEMBL
Match: A0A6J1FUL0 (Alpha-L-fucosidase OS=Cucurbita moschata OX=3662 GN=LOC111448567 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.8e-92
Identity = 173/206 (83.98%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 2   KNHNIIFFTNC-NFPLPFSLLNSIS--SFSLFFLLSLFLQPISTSSSSSLINNPPPLPIL 61
           K   I FF  C N P P S +NSIS    S+ FLLSL LQPIS+SSSS  I++PPPLPIL
Sbjct: 3   KKPAIRFFGYCNNIPKPSSAINSISQTQISIVFLLSLLLQPISSSSSS--ISSPPPLPIL 62

Query: 62  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGF 121
           PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGH  PSVFNP NLDAAQWVRVAKDAGF
Sbjct: 63  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVDPSVFNPTNLDAAQWVRVAKDAGF 122

Query: 122 SRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWD 181
           SR+ILTAKHHDGFCLWPSEYTNYSV SSPWRNG+GDVVGELAKAAKEAGLGLGLYLSPWD
Sbjct: 123 SRLILTAKHHDGFCLWPSEYTNYSVRSSPWRNGEGDVVGELAKAAKEAGLGLGLYLSPWD 182

Query: 182 RHESCYGKTLEYNEFYLGQMTELLTR 205
           RHE CYG TLEYNEFY+GQMTELLTR
Sbjct: 183 RHEPCYGNTLEYNEFYVGQMTELLTR 206

[Close]

BLAST of Cmc11g0306521.1 vs. ExPASy TrEMBL
Match: A0A6J1J578 (Alpha-L-fucosidase OS=Cucurbita maxima OX=3661 GN=LOC111483599 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.4e-91
Identity = 172/206 (83.50%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 2   KNHNIIFFTNC-NFPLPFSLLNSIS--SFSLFFLLSLFLQPISTSSSSSLINNPPPLPIL 61
           K   I FF  C N P P S LNSIS    S+ FLLSL LQPIS+SSSSS I++PPPLPIL
Sbjct: 3   KKPAIRFFCYCNNIPKPSSALNSISQTQISIVFLLSLLLQPISSSSSSS-ISSPPPLPIL 62

Query: 62  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGF 121
           PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGH  PS FNP NLDAAQWVRVAKDAGF
Sbjct: 63  PIPSASQIQWQLGNMALFLHFGPNTFTDSEWGTGHVDPSAFNPTNLDAAQWVRVAKDAGF 122

Query: 122 SRIILTAKHHDGFCLWPSEYTNYSVSSSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWD 181
           SR+ILTAKHHDGFCLWPSEYTNYSV SSPWR+G+GDVVGELAKAAKEAGLGLGLYLSPWD
Sbjct: 123 SRLILTAKHHDGFCLWPSEYTNYSVRSSPWRDGEGDVVGELAKAAKEAGLGLGLYLSPWD 182

Query: 182 RHESCYGKTLEYNEFYLGQMTELLTR 205
           RHE CYG T EYNEFY+GQMTELLTR
Sbjct: 183 RHEPCYGNTQEYNEFYVGQMTELLTR 207

[Close]

BLAST of Cmc11g0306521.1 vs. TAIR 10
Match: AT2G28100.1 (alpha-L-fucosidase 1 )

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-78
Identity = 134/180 (74.44%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 25  SSFSLFFLLSLFLQPISTSSSSSLINNPPPLPILPIPSASQIQWQLGNMALFLHFGPNTF 84
           S  +LFF     L     S+SSSL+  P P PILP+PS+ Q+QWQLG+MA+FLHFGPNTF
Sbjct: 3   SQITLFFFFFSILSLSQISNSSSLL-KPHPCPILPLPSSQQLQWQLGSMAMFLHFGPNTF 62

Query: 85  TDSEWGTGHAHPSVFNPINLDAAQWVRVAKDAGFSRIILTAKHHDGFCLWPSEYTNYSVS 144
           TDSEWGTG A+PS+FNP +L+A+QWV++AKD+GFSR+ILTAKHHDGFCLWPSEYT+YSV 
Sbjct: 63  TDSEWGTGKANPSIFNPTHLNASQWVQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVK 122

Query: 145 SSPWRNGKGDVVGELAKAAKEAGLGLGLYLSPWDRHESCYGKTLEYNEFYLGQMTELLTR 204
           SS WRNG GDVV ELA AAKEAG+GLGLYLSPWDRHE CYGKTLEYNEFYL QMTELLT+
Sbjct: 123 SSQWRNGAGDVVAELASAAKEAGIGLGLYLSPWDRHEQCYGKTLEYNEFYLSQMTELLTK 181

The following BLAST results are available for this feature:

BLAST of Cmc11g0306521.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465351.1	3.1e-115	100.00	PREDICTED: alpha-L-fucosidase 1 [Cucumis melo] >KAA0035226.1 alpha-L-fucosidase ...	[more]
XP_004145759.1	8.4e-113	97.55	alpha-L-fucosidase 1 [Cucumis sativus] >KGN46870.1 hypothetical protein Csa_0205...	[more]
XP_038901722.1	7.4e-101	89.66	alpha-L-fucosidase 1-like [Benincasa hispida] >XP_038902551.1 alpha-L-fucosidase...	[more]
XP_022944007.1	1.4e-91	83.98	alpha-L-fucosidase 1 isoform X1 [Cucurbita moschata]	[more]
KAG6570812.1	5.3e-91	83.50	Alpha-L-fucosidase 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cmc11g0306521.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW72	1.6e-77	74.44	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2	[more]
Q7XUR3	6.1e-66	70.00	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
P10901	1.2e-08	38.27	Alpha-L-fucosidase OS=Dictyostelium discoideum OX=44689 GN=alfA PE=3 SV=1	[more]
Q9VTJ4	2.0e-08	43.90	Putative alpha-L-fucosidase OS=Drosophila melanogaster OX=7227 GN=Fuca PE=2 SV=2	[more]
C3YWU0	3.4e-08	39.56	Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV...	[more]

BLAST of Cmc11g0306521.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGJ8	1.5e-115	100.00	Alpha-L-fucosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G0...	[more]
A0A1S3CNP1	1.5e-115	100.00	Alpha-L-fucosidase OS=Cucumis melo OX=3656 GN=LOC103502990 PE=3 SV=1	[more]
A0A0A0KAV7	4.1e-113	97.55	Alpha-L-fucosidase OS=Cucumis sativus OX=3659 GN=Csa_6G147630 PE=3 SV=1	[more]
A0A6J1FUL0	6.8e-92	83.98	Alpha-L-fucosidase OS=Cucurbita moschata OX=3662 GN=LOC111448567 PE=3 SV=1	[more]
A0A6J1J578	4.4e-91	83.50	Alpha-L-fucosidase OS=Cucurbita maxima OX=3661 GN=LOC111483599 PE=3 SV=1	[more]

BLAST of Cmc11g0306521.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28100.1	1.1e-78	74.44	alpha-L-fucosidase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000933	Glycoside hydrolase, family 29	SMART	SM00812	alpha_l_fucos	coord: 56..204 e-value: 0.0017 score: -133.7
IPR000933	Glycoside hydrolase, family 29	PFAM	PF01120	Alpha_L_fucos	coord: 97..187 e-value: 6.8E-22 score: 78.4
IPR000933	Glycoside hydrolase, family 29	PANTHER	PTHR10030	ALPHA-L-FUCOSIDASE	coord: 29..204
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 56..204 e-value: 1.9E-69 score: 236.5
None	No IPR available	PANTHER	PTHR10030:SF27	ALPHA-L-FUCOSIDASE 1	coord: 29..204
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 54..204

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0306521	Cmc11g0306521	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0306521.1-exon	Cmc11g0306521.1-exon-CMiso1.1chr11:28008196..28009076	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0306521.1-five_prime_utr	Cmc11g0306521.1-five_prime_utr-CMiso1.1chr11:28008196..28008370	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0306521.1-cds	Cmc11g0306521.1-cds-CMiso1.1chr11:28008371..28008985	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0306521.1-three_prime_utr	Cmc11g0306521.1-three_prime_utr-CMiso1.1chr11:28008986..28009076	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0306521.1	Cmc11g0306521.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004560	alpha-L-fucosidase activity