Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TCTTTCAATCCTCGAACCCAGTTTTTTCCCAAATTGCATTTCTTACCCTACTCAGATCTCTCCCTTTCAACGTCCTCCCAATTCCTTCGTGCACCGAAAACGATGCGATCCTCGTCCTCGCCATTTGCCTCGCCAGAAACTCATGAGGTGGAACTCTCATTTCTTCCTCTTCATCTTCATCATCTTCCATGTCATCCGCGTATTCCGAACTCCTCTTCTCTCTATATTCCTCCTTCAAAATCTTCGACCAATCCGGAATATTCACCGGCAACGATGACGCTCCACCTCCCCCCTGCACCTCCACTCGTTTCGACGAAATTTTCTTCTTCGGGATTCGCGTAGGAGATCTCGCCGTACCCGAGTTGTAAATGTCAGATTCGTTGAGTTCGAAGGAGAAATCGGAAGTGAAGGAGTGGTGGTGGTGGTGGCCGGAGATGTCGCCGGTGAGGAAACGGTAATTGGAACGACCGTAACAGCTTTTTCCGGTCGCCATAAGAAGGAGAGAAAGATGATTAATGCGAATGAAAGTAGTAGTTGGGGATTTTTGAAAGGATTTGAGAAGAAAATATTGGTTGAGGGTTTTTGGATTTGATTTTGTTAAGCGCTTTTTATAAAAGGTTTTTGGGGGATGGGCTAGAGAGAGAGAGAGAGGGGGTTTTTTCTTTTTCATTACTGATTGATTATGGATAAGGCTTTATTATTTATTTCACTATGTTAAATTAGTTGTAAGTTTTGAATTTACTAAAATGTCCCTCTTGCGATTTTCGTGGAAATGACACGTTGGATATTTCAATTTATCCACTCAAAAAATGCTCTCTCTTTTTTTTCTTTATAGCGAGGATTCAGTGTATCGCAGCCCATGATAATCGGGAAAGACAGTTCGTCGGTGTCAACCGTCATTGAAATTGAATGGAGGCGATGGTTGCCACGTATGAGATGGAGATGAAAGCTCAGCTATTGGGGAATGGGTATTATGG mRNA sequence TCTTTCAATCCTCGAACCCAGTTTTTTCCCAAATTGCATTTCTTACCCTACTCAGATCTCTCCCTTTCAACGTCCTCCCAATTCCTTCGTGCACCGAAAACGATGCGATCCTCGTCCTCGCCATTTGCCTCGCCAGAAACTCATGAGCGAGGATTCAGTGTATCGCAGCCCATGATAATCGGGAAAGACAGTTCGTCGGTGTCAACCGTCATTGAAATTGAATGGAGGCGATGGTTGCCACGTATGAGATGGAGATGAAAGCTCAGCTATTGGGGAATGGGTATTATGG Coding sequence (CDS) ATGCGATCCTCGTCCTCGCCATTTGCCTCGCCAGAAACTCATGAGCGAGGATTCAGTGTATCGCAGCCCATGATAATCGGGAAAGACAGTTCGTCGGTGTCAACCGTCATTGAAATTGAATGGAGGCGATGGTTGCCACGTATGAGATGGAGATGA Protein sequence MRSSSSPFASPETHERGFSVSQPMIIGKDSSSVSTVIEIEWRRWLPRMRWR
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..17 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..23 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc11g0306031.1-exon | Cmc11g0306031.1-exon-CMiso1.1chr11:27281160..27281301 | exon |
| Cmc11g0306031.1-exon | Cmc11g0306031.1-exon-CMiso1.1chr11:27281990..27282136 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc11g0306031.1-three_prime_utr | Cmc11g0306031.1-three_prime_utr-CMiso1.1chr11:27281160..27281190 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc11g0306031.1-cds | Cmc11g0306031.1-cds-CMiso1.1chr11:27281191..27281301 | CDS |
| Cmc11g0306031.1-cds | Cmc11g0306031.1-cds-CMiso1.1chr11:27281990..27282034 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc11g0306031.1-five_prime_utr | Cmc11g0306031.1-five_prime_utr-CMiso1.1chr11:27282035..27282136 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cmc11g0306031.1 | Cmc11g0306031.1-protein | polypeptide |
|
