Cmc11g0304921.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0304921.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr11: 26241432 .. 26242364 (-)
Sequence length	933
RNA-Seq Expression	Cmc11g0304921.1
Synteny	Cmc11g0304921.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCGTGGACAGAAACTGGTCAAGGATATTTGGTAGAGTGCAGGGCAATAGAGGGAGGAGTAGTGTTAGCTGAAAAAGAAAAGGAAACAGAGGCCGATGTGATACCTACTAATGTACAGAATGTGATGAAGAATTTTAGTGACATTTTTGATTCGCCAGAAACTTTACCACCAAGGAGGGTAATTGAACATCACATTCATTTGAAAACAGGAACAGACCCAGTGAATGTCAGGCCTTATAGGTATGCTTTTCAGCAGAAGGCAGAGATGGAAAAATTGGTTGACGAAATGTTGACATCTGAGATTATACGACCAAGCTCCAGCCCCTACTCCAGCCCGGTATTACTTGTCAAGAAAAAAGATGGAAGCTGGAGGTTTTGTATGGACTACCGTGCCCTTAACAACGTCACCATACCATATAAGTTTCCTATTCCTGTTATAGAGGAATTATTTGATGAACTTAACGGTGCAAATTTATTTTCTAAAATTGACTTAAAGGCTAGATATCATCAAATAAGAATGCATAGGGAAGATATTGAGAAAACTGCATTTAGAACACACGAGGGACACAATGAATTCTTAGTGATGCCCTTTGGTTTAACAAATGCGCCAGCTACCTTTCAATCTCTTATGAATTCTATTTTTCGATCATATCTGAGGAAGTTCGTTTTGGTATTTTTTGATGATATTTTGATTTATAGTCGAGGAATGGAGGAGCATATATATCATTTAGAGCTGGTGTTTGAAGTATTACGTGAACATAAGCTTTATGCTAACAAGAAGAAGTGCAGTTTTGCTTTTCAAAGAGTAGAATATCTTGGCCACATTGTTTCAGGTCAAGGGGTGGAAGCGGATCCGGAGAAAATTAAATCCATTAAACAGTGGCCAGTTCCTTCCAACGTGAGAGAATTACGGGGATTTTTGGGCTGA

mRNA sequence

ATGAAAGCGTGGACAGAAACTGGTCAAGGATATTTGGTAGAGTGCAGGGCAATAGAGGGAGGAGTAGTGTTAGCTGAAAAAGAAAAGGAAACAGAGGCCGATGTGATACCTACTAATGTACAGAATGTGATGAAGAATTTTAGTGACATTTTTGATTCGCCAGAAACTTTACCACCAAGGAGGGTAATTGAACATCACATTCATTTGAAAACAGGAACAGACCCAGTGAATGTCAGGCCTTATAGGTATGCTTTTCAGCAGAAGGCAGAGATGGAAAAATTGGTTGACGAAATGTTGACATCTGAGATTATACGACCAAGCTCCAGCCCCTACTCCAGCCCGGTATTACTTGTCAAGAAAAAAGATGGAAGCTGGAGGTTTTGTATGGACTACCGTGCCCTTAACAACGTCACCATACCATATAAGTTTCCTATTCCTGTTATAGAGGAATTATTTGATGAACTTAACGGTGCAAATTTATTTTCTAAAATTGACTTAAAGGCTAGATATCATCAAATAAGAATGCATAGGGAAGATATTGAGAAAACTGCATTTAGAACACACGAGGGACACAATGAATTCTTAGTGATGCCCTTTGGTTTAACAAATGCGCCAGCTACCTTTCAATCTCTTATGAATTCTATTTTTCGATCATATCTGAGGAAGTTCGTTTTGGTATTTTTTGATGATATTTTGATTTATAGTCGAGGAATGGAGGAGCATATATATCATTTAGAGCTGGTGTTTGAAGTATTACGTGAACATAAGCTTTATGCTAACAAGAAGAAGTGCAGTTTTGCTTTTCAAAGAGTAGAATATCTTGGCCACATTGTTTCAGGTCAAGGGGTGGAAGCGGATCCGGAGAAAATTAAATCCATTAAACAGTGGCCAGTTCCTTCCAACGTGAGAGAATTACGGGGATTTTTGGGCTGA

Coding sequence (CDS)

ATGAAAGCGTGGACAGAAACTGGTCAAGGATATTTGGTAGAGTGCAGGGCAATAGAGGGAGGAGTAGTGTTAGCTGAAAAAGAAAAGGAAACAGAGGCCGATGTGATACCTACTAATGTACAGAATGTGATGAAGAATTTTAGTGACATTTTTGATTCGCCAGAAACTTTACCACCAAGGAGGGTAATTGAACATCACATTCATTTGAAAACAGGAACAGACCCAGTGAATGTCAGGCCTTATAGGTATGCTTTTCAGCAGAAGGCAGAGATGGAAAAATTGGTTGACGAAATGTTGACATCTGAGATTATACGACCAAGCTCCAGCCCCTACTCCAGCCCGGTATTACTTGTCAAGAAAAAAGATGGAAGCTGGAGGTTTTGTATGGACTACCGTGCCCTTAACAACGTCACCATACCATATAAGTTTCCTATTCCTGTTATAGAGGAATTATTTGATGAACTTAACGGTGCAAATTTATTTTCTAAAATTGACTTAAAGGCTAGATATCATCAAATAAGAATGCATAGGGAAGATATTGAGAAAACTGCATTTAGAACACACGAGGGACACAATGAATTCTTAGTGATGCCCTTTGGTTTAACAAATGCGCCAGCTACCTTTCAATCTCTTATGAATTCTATTTTTCGATCATATCTGAGGAAGTTCGTTTTGGTATTTTTTGATGATATTTTGATTTATAGTCGAGGAATGGAGGAGCATATATATCATTTAGAGCTGGTGTTTGAAGTATTACGTGAACATAAGCTTTATGCTAACAAGAAGAAGTGCAGTTTTGCTTTTCAAAGAGTAGAATATCTTGGCCACATTGTTTCAGGTCAAGGGGTGGAAGCGGATCCGGAGAAAATTAAATCCATTAAACAGTGGCCAGTTCCTTCCAACGTGAGAGAATTACGGGGATTTTTGGGCTGA

Protein sequence

MKAWTETGQGYLVECRAIEGGVVLAEKEKETEADVIPTNVQNVMKNFSDIFDSPETLPPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHREDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGMEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

Homology

[Close]

BLAST of Cmc11g0304921.1 vs. NCBI nr
Match: KAA0061363.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK14718.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 511.5 bits (1316), Expect = 5.0e-141
Identity = 248/310 (80.00%), Postives = 275/310 (88.71%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLAEKEKETEADVIPTNVQNVMKNFSDIFDSPETLPPR 60
           MKAWT++ QGYLVECRA++GGV+L+E+  E E +++P +VQ ++  F+D+F+ PETLPPR
Sbjct: 215 MKAWTDSDQGYLVECRALQGGVILSEEVMEEEVNMVPADVQTMLDKFNDVFEWPETLPPR 274

Query: 61  RVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKK 120
           R IEH IH+K GT PVNVRPYRYAF QKAEME+LVDEML+S II+PS+SPYSSPVLLVKK
Sbjct: 275 RAIEHQIHMKLGTVPVNVRPYRYAFHQKAEMERLVDEMLSSGIIQPSNSPYSSPVLLVKK 334

Query: 121 KDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHREDI 180
           KDGS   C DYRA NN TI YKFPI VIEELFDELNGANLFSKIDLK  YHQIR H+ED 
Sbjct: 335 KDGS---CADYRAFNNETIQYKFPILVIEELFDELNGANLFSKIDLKVGYHQIRRHKEDT 394

Query: 181 EKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGMEE 240
           EKTAFRTHEGH EFL+MPFGL NAPATFQSLMNSIFRSY+RKFVLVFFDDILIYSRGMEE
Sbjct: 395 EKTAFRTHEGHYEFLMMPFGLRNAPATFQSLMNSIFRSYIRKFVLVFFDDILIYSRGMEE 454

Query: 241 HIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPS 300
           HIYHLELV EVLREHKLYANKKKCSFAFQ+VEYLGHIVSGQGVE DPEK +SIKQW VP+
Sbjct: 455 HIYHLELVLEVLREHKLYANKKKCSFAFQKVEYLGHIVSGQGVEVDPEKTRSIKQWSVPT 514

Query: 301 NVRELRGFLG 311
           NVREL GFLG
Sbjct: 515 NVRELWGFLG 521

[Close]

BLAST of Cmc11g0304921.1 vs. NCBI nr
Match: KAA0037155.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK13918.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 494.6 bits (1272), Expect = 6.3e-136
Identity = 239/301 (79.40%), Postives = 265/301 (88.04%), Query Frame = 0


Query: 10  GYLVECRAIEGGVVLAEKEKETEADVIPTNVQNVMKNFSDIFDSPETLPPRRVIEHHIHL 69
           GYLVECRA+E GV+L E+    E +  P  VQ ++  ++D+F+  ETLPPRR IEHHIHL
Sbjct: 101 GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHL 160

Query: 70  KTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKKKDGSWRFCM 129
           KTGT+PVNVRPY YAFQQKAEMEKLVDEM++S II+P +SPYSS VLLVKK DGSWRFCM
Sbjct: 161 KTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCM 220

Query: 130 DYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHREDIEKTAFRTHE 189
           +YRALNN T+P KFPIPVIEELFDELNGANLFSKIDLKA YHQIRMH+EDIEKTAFRTHE
Sbjct: 221 NYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHE 280

Query: 190 GHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGMEEHIYHLELVF 249
           GH EFLVMPFGLTNAPATFQSL+NS+FR YLRKFVLVFFD ILIYSRGMEEH YHLELV 
Sbjct: 281 GHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVL 340

Query: 250 EVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFL 309
           EVLREHKLYANKKKC+FA+Q+VEYLGHIVSG+GVE DPEKI+SIKQWPV  N  E+RG L
Sbjct: 341 EVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL 400

Query: 310 G 311
           G
Sbjct: 401 G 401

[Close]

BLAST of Cmc11g0304921.1 vs. NCBI nr
Match: TYK30083.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 463.8 bits (1192), Expect = 1.2e-126
Identity = 224/313 (71.57%), Postives = 261/313 (83.39%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLA---EKEKETEADVIPTNVQNVMKNFSDIFDSPETL 60
           +K W E   GYL+ECR++E   +     E+++ET+  +IP     ++  FSD+F+ PE L
Sbjct: 560 VKTWEEHDHGYLIECRSVEVAELKTSHKEEKEETKKKLIP-----ILNQFSDVFEWPEKL 619

Query: 61  PPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLL 120
           PPRR IEH IHLK GT+PVNVRPYRYA+ QK EMEKLV+EML S IIRPS+SPYSSPVLL
Sbjct: 620 PPRRSIEHQIHLKEGTNPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSASPYSSPVLL 679

Query: 121 VKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHR 180
           VKKKDGSWRFC+DYRALNNVT+P KFPIPV+EELFDEL GA+LF+KIDLKA YHQIRM  
Sbjct: 680 VKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELGGASLFTKIDLKAGYHQIRMVD 739

Query: 181 EDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRG 240
            DIEKTAFRTHEGH EFLVMPFGLTNAPATFQSLMNSIFR YLRKFVLVFFDDILIYSR 
Sbjct: 740 GDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRPYLRKFVLVFFDDILIYSRN 799

Query: 241 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWP 300
            E+H+ H+E+VF VLR+H+L+AN+KKCSF   +VEYLGH++S +GVE DPEKIK+I  WP
Sbjct: 800 WEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISNKGVEVDPEKIKAITNWP 859

Query: 301 VPSNVRELRGFLG 311
            P+NVRE RGFLG
Sbjct: 860 KPTNVRETRGFLG 867

[Close]

BLAST of Cmc11g0304921.1 vs. NCBI nr
Match: TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 463.8 bits (1192), Expect = 1.2e-126
Identity = 224/313 (71.57%), Postives = 261/313 (83.39%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLA---EKEKETEADVIPTNVQNVMKNFSDIFDSPETL 60
           +K W E   GYL+ECR++E   +     E+++ET+  +IP     ++  FSD+F+ PE L
Sbjct: 560 VKTWEEHDHGYLIECRSVEVAELKTSHKEEKEETKKKLIP-----ILNQFSDVFEWPEKL 619

Query: 61  PPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLL 120
           PPRR IEH IHLK GT+PVNVRPYRYA+ QK EMEKLV+EML S IIRPS+SPYSSPVLL
Sbjct: 620 PPRRSIEHQIHLKEGTNPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSASPYSSPVLL 679

Query: 121 VKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHR 180
           VKKKDGSWRFC+DYRALNNVT+P KFPIPV+EELFDEL GA+LF+KIDLKA YHQIRM  
Sbjct: 680 VKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELGGASLFTKIDLKAGYHQIRMVD 739

Query: 181 EDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRG 240
            DIEKTAFRTHEGH EFLVMPFGLTNAPATFQSLMNSIFR YLRKFVLVFFDDILIYSR 
Sbjct: 740 GDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRPYLRKFVLVFFDDILIYSRN 799

Query: 241 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWP 300
            E+H+ H+E+VF VLR+H+L+AN+KKCSF   +VEYLGH++S +GVE DPEKIK+I  WP
Sbjct: 800 WEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISNKGVEVDPEKIKAITNWP 859

Query: 301 VPSNVRELRGFLG 311
            P+NVRE RGFLG
Sbjct: 860 KPTNVRETRGFLG 867

[Close]

BLAST of Cmc11g0304921.1 vs. NCBI nr
Match: KAA0065392.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.6e-126
Identity = 224/313 (71.57%), Postives = 261/313 (83.39%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLA---EKEKETEADVIPTNVQNVMKNFSDIFDSPETL 60
           +K W E   GYL+ECR++E   +     E+++ET+  +IP     ++  FSD+F+ PE L
Sbjct: 560 VKTWEEHDHGYLIECRSVEVAELKTSHKEEKEETKKKLIP-----ILDQFSDVFEWPEKL 619

Query: 61  PPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLL 120
           PPRR IEH IHLK GT+PVNVRPYRYA+ QK EMEKLV+EML S IIRPS+SPYSSPVLL
Sbjct: 620 PPRRSIEHQIHLKEGTNPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSASPYSSPVLL 679

Query: 121 VKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHR 180
           VKKKDGSWRFC+DYRALNNVT+P KFPIPV+EELFDEL GA+LF+KIDLKA YHQIRM  
Sbjct: 680 VKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELGGASLFTKIDLKAGYHQIRMVD 739

Query: 181 EDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRG 240
            DIEKTAFRTHEGH EFLVMPFGLTNAPATFQSLMNSIFR YLRKFVLVFFDDILIYSR 
Sbjct: 740 GDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRPYLRKFVLVFFDDILIYSRN 799

Query: 241 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWP 300
            E+H+ H+E+VF VLR+H+L+AN+KKCSF   +VEYLGH++S +GVE DPEKIK+I  WP
Sbjct: 800 WEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISNKGVEVDPEKIKAITNWP 859

Query: 301 VPSNVRELRGFLG 311
            P+NVRE RGFLG
Sbjct: 860 KPTNVRETRGFLG 867

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.2e-54
Identity = 107/250 (42.80%), Postives = 150/250 (60.00%), Query Frame = 0


Query: 66  HIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKKKD--- 125
           H+   T   P+  + Y  A   + E+E  V EML   +IR S+SPY+SP  +V KK    
Sbjct: 197 HVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDAS 256

Query: 126 --GSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHREDI 185
               +R  +DYR LN +TIP ++PIP ++E+  +L     F+ IDL   +HQI M  E I
Sbjct: 257 GANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESI 316

Query: 186 EKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGMEE 245
            KTAF T  GH E+L MPFGL NAPATFQ  MN+I R  L K  LV+ DDI+I+S  + E
Sbjct: 317 SKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTE 376

Query: 246 HIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPS 305
           H+  ++LVF  L +  L     KC F  +   +LGHIV+  G++ +P K+K+I  +P+P+
Sbjct: 377 HLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPT 436

Query: 306 NVRELRGFLG 311
             +E+R FLG
Sbjct: 437 KDKEIRAFLG 446

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-53
Identity = 110/260 (42.31%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 57  LPPRRV------IEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSP 116
           LPPR        ++H I +K G     ++PY    + + E+ K+V ++L ++ I PS SP
Sbjct: 572 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 117 YSSPVLLVKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARY 176
            SSPV+LV KKDG++R C+DYR LN  TI   FP+P I+ L   +  A +F+ +DL + Y
Sbjct: 632 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 691

Query: 177 HQIRMHREDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDD 236
           HQI M  +D  KTAF T  G  E+ VMPFGL NAP+TF   M   FR    +FV V+ DD
Sbjct: 692 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 751

Query: 237 ILIYSRGMEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKI 296
           ILI+S   EEH  HL+ V E L+   L   KKKC FA +  E+LG+ +  Q +     K 
Sbjct: 752 ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 811

Query: 297 KSIKQWPVPSNVRELRGFLG 311
            +I+ +P P  V++ + FLG
Sbjct: 812 AAIRDFPTPKTVKQAQRFLG 829

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-53
Identity = 110/260 (42.31%), Postives = 153/260 (58.85%), Query Frame = 0


Query: 57  LPPRRV------IEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSP 116
           LPPR        ++H I +K G     ++PY    + + E+ K+V ++L ++ I PS SP
Sbjct: 598 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 117 YSSPVLLVKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARY 176
            SSPV+LV KKDG++R C+DYR LN  TI   FP+P I+ L   +  A +F+ +DL + Y
Sbjct: 658 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 717

Query: 177 HQIRMHREDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDD 236
           HQI M  +D  KTAF T  G  E+ VMPFGL NAP+TF   M   FR    +FV V+ DD
Sbjct: 718 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 777

Query: 237 ILIYSRGMEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKI 296
           ILI+S   EEH  HL+ V E L+   L   KKKC FA +  E+LG+ +  Q +     K 
Sbjct: 778 ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 837

Query: 297 KSIKQWPVPSNVRELRGFLG 311
            +I+ +P P  V++ + FLG
Sbjct: 838 AAIRDFPTPKTVKQAQRFLG 855

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.1e-53
Identity = 107/252 (42.46%), Postives = 158/252 (62.70%), Query Frame = 0


Query: 64  EHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLV-KKKD 123
           +H I+ K      +   Y  A++Q  E+E  + +ML   IIR S+SPY+SP+ +V KK+D
Sbjct: 198 KHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQD 257

Query: 124 GS----WRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHRE 183
            S    +R  +DYR LN +T+  + PIP ++E+  +L   N F+ IDL   +HQI M  E
Sbjct: 258 ASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPE 317

Query: 184 DIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGM 243
            + KTAF T  GH E+L MPFGL NAPATFQ  MN I R  L K  LV+ DDI+++S  +
Sbjct: 318 SVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSL 377

Query: 244 EEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPV 303
           +EH+  L LVFE L +  L     KC F  Q   +LGH+++  G++ +PEKI++I+++P+
Sbjct: 378 DEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPI 437

Query: 304 PSNVRELRGFLG 311
           P+  +E++ FLG
Sbjct: 438 PTKPKEIKAFLG 447

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-52
Identity = 107/277 (38.63%), Postives = 165/277 (59.57%), Query Frame = 0


Query: 40  VQNVMKNFSDIFDSP-ETLPPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEM 99
           + +++  F  IF+ P   +     ++  I   T  DP+  + Y Y    + E+E+ +DE+
Sbjct: 88  LNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNT-QDPIYAKSYPYPVNMRGEVERQIDEL 147

Query: 100 LTSEIIRPSSSPYSSPVLLVKKK-----DGSWRFCMDYRALNNVTIPYKFPIPVIEELFD 159
           L   IIRPS+SPY+SP+ +V KK     +  +R  +D++ LN VTIP  +PIP I     
Sbjct: 148 LQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLA 207

Query: 160 ELNGANLFSKIDLKARYHQIRMHREDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMN 219
            L  A  F+ +DL + +HQI M   DI KTAF T  G  EFL +PFGL NAPA FQ +++
Sbjct: 208 SLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMID 267

Query: 220 SIFRSYLRKFVLVFFDDILIYSRGMEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEY 279
            I R ++ K   V+ DDI+++S   + H  +L LV   L +  L  N +K  F   +VE+
Sbjct: 268 DILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEF 327

Query: 280 LGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG 311
           LG+IV+  G++ADP+K+++I + P P++V+EL+ FLG
Sbjct: 328 LGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLG 363

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy TrEMBL
Match: A0A5D3CU29 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00500 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.4e-141
Identity = 248/310 (80.00%), Postives = 275/310 (88.71%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLAEKEKETEADVIPTNVQNVMKNFSDIFDSPETLPPR 60
           MKAWT++ QGYLVECRA++GGV+L+E+  E E +++P +VQ ++  F+D+F+ PETLPPR
Sbjct: 215 MKAWTDSDQGYLVECRALQGGVILSEEVMEEEVNMVPADVQTMLDKFNDVFEWPETLPPR 274

Query: 61  RVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKK 120
           R IEH IH+K GT PVNVRPYRYAF QKAEME+LVDEML+S II+PS+SPYSSPVLLVKK
Sbjct: 275 RAIEHQIHMKLGTVPVNVRPYRYAFHQKAEMERLVDEMLSSGIIQPSNSPYSSPVLLVKK 334

Query: 121 KDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHREDI 180
           KDGS   C DYRA NN TI YKFPI VIEELFDELNGANLFSKIDLK  YHQIR H+ED 
Sbjct: 335 KDGS---CADYRAFNNETIQYKFPILVIEELFDELNGANLFSKIDLKVGYHQIRRHKEDT 394

Query: 181 EKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGMEE 240
           EKTAFRTHEGH EFL+MPFGL NAPATFQSLMNSIFRSY+RKFVLVFFDDILIYSRGMEE
Sbjct: 395 EKTAFRTHEGHYEFLMMPFGLRNAPATFQSLMNSIFRSYIRKFVLVFFDDILIYSRGMEE 454

Query: 241 HIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPS 300
           HIYHLELV EVLREHKLYANKKKCSFAFQ+VEYLGHIVSGQGVE DPEK +SIKQW VP+
Sbjct: 455 HIYHLELVLEVLREHKLYANKKKCSFAFQKVEYLGHIVSGQGVEVDPEKTRSIKQWSVPT 514

Query: 301 NVRELRGFLG 311
           NVREL GFLG
Sbjct: 515 NVRELWGFLG 521

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy TrEMBL
Match: A0A5A7T6Q1 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001160 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 3.0e-136
Identity = 239/301 (79.40%), Postives = 265/301 (88.04%), Query Frame = 0


Query: 10  GYLVECRAIEGGVVLAEKEKETEADVIPTNVQNVMKNFSDIFDSPETLPPRRVIEHHIHL 69
           GYLVECRA+E GV+L E+    E +  P  VQ ++  ++D+F+  ETLPPRR IEHHIHL
Sbjct: 101 GYLVECRALEAGVLLLEETTVEENNNAPEEVQKILAKYNDVFEWSETLPPRRAIEHHIHL 160

Query: 70  KTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKKKDGSWRFCM 129
           KTGT+PVNVRPY YAFQQKAEMEKLVDEM++S II+P +SPYSS VLLVKK DGSWRFCM
Sbjct: 161 KTGTEPVNVRPYWYAFQQKAEMEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCM 220

Query: 130 DYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHREDIEKTAFRTHE 189
           +YRALNN T+P KFPIPVIEELFDELNGANLFSKIDLKA YHQIRMH+EDIEKTAFRTHE
Sbjct: 221 NYRALNNATVPDKFPIPVIEELFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHE 280

Query: 190 GHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRGMEEHIYHLELVF 249
           GH EFLVMPFGLTNAPATFQSL+NS+FR YLRKFVLVFFD ILIYSRGMEEH YHLELV 
Sbjct: 281 GHYEFLVMPFGLTNAPATFQSLVNSVFRFYLRKFVLVFFDYILIYSRGMEEHAYHLELVL 340

Query: 250 EVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFL 309
           EVLREHKLYANKKKC+FA+Q+VEYLGHIVSG+GVE DPEKI+SIKQWPV  N  E+RG L
Sbjct: 341 EVLREHKLYANKKKCNFAYQKVEYLGHIVSGKGVEVDPEKIRSIKQWPVLKNAGEVRGSL 400

Query: 310 G 311
           G
Sbjct: 401 G 401

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy TrEMBL
Match: A0A5D3E1V9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00560 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.8e-127
Identity = 224/313 (71.57%), Postives = 261/313 (83.39%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLA---EKEKETEADVIPTNVQNVMKNFSDIFDSPETL 60
           +K W E   GYL+ECR++E   +     E+++ET+  +IP     ++  FSD+F+ PE L
Sbjct: 560 VKTWEEHDHGYLIECRSVEVAELKTSHKEEKEETKKKLIP-----ILNQFSDVFEWPEKL 619

Query: 61  PPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLL 120
           PPRR IEH IHLK GT+PVNVRPYRYA+ QK EMEKLV+EML S IIRPS+SPYSSPVLL
Sbjct: 620 PPRRSIEHQIHLKEGTNPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSASPYSSPVLL 679

Query: 121 VKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHR 180
           VKKKDGSWRFC+DYRALNNVT+P KFPIPV+EELFDEL GA+LF+KIDLKA YHQIRM  
Sbjct: 680 VKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELGGASLFTKIDLKAGYHQIRMVD 739

Query: 181 EDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRG 240
            DIEKTAFRTHEGH EFLVMPFGLTNAPATFQSLMNSIFR YLRKFVLVFFDDILIYSR 
Sbjct: 740 GDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRPYLRKFVLVFFDDILIYSRN 799

Query: 241 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWP 300
            E+H+ H+E+VF VLR+H+L+AN+KKCSF   +VEYLGH++S +GVE DPEKIK+I  WP
Sbjct: 800 WEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISNKGVEVDPEKIKAITNWP 859

Query: 301 VPSNVRELRGFLG 311
            P+NVRE RGFLG
Sbjct: 860 KPTNVRETRGFLG 867

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy TrEMBL
Match: A0A5D3DFT1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001370 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.8e-127
Identity = 224/313 (71.57%), Postives = 261/313 (83.39%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLA---EKEKETEADVIPTNVQNVMKNFSDIFDSPETL 60
           +K W E   GYL+ECR++E   +     E+++ET+  +IP     ++  FSD+F+ PE L
Sbjct: 560 VKTWEEHDHGYLIECRSVEVAELKTSHKEEKEETKKKLIP-----ILNQFSDVFEWPEKL 619

Query: 61  PPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLL 120
           PPRR IEH IHLK GT+PVNVRPYRYA+ QK EMEKLV+EML S IIRPS+SPYSSPVLL
Sbjct: 620 PPRRSIEHQIHLKEGTNPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSASPYSSPVLL 679

Query: 121 VKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHR 180
           VKKKDGSWRFC+DYRALNNVT+P KFPIPV+EELFDEL GA+LF+KIDLKA YHQIRM  
Sbjct: 680 VKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELGGASLFTKIDLKAGYHQIRMVD 739

Query: 181 EDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRG 240
            DIEKTAFRTHEGH EFLVMPFGLTNAPATFQSLMNSIFR YLRKFVLVFFDDILIYSR 
Sbjct: 740 GDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRPYLRKFVLVFFDDILIYSRN 799

Query: 241 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWP 300
            E+H+ H+E+VF VLR+H+L+AN+KKCSF   +VEYLGH++S +GVE DPEKIK+I  WP
Sbjct: 800 WEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISNKGVEVDPEKIKAITNWP 859

Query: 301 VPSNVRELRGFLG 311
            P+NVRE RGFLG
Sbjct: 860 KPTNVRETRGFLG 867

[Close]

BLAST of Cmc11g0304921.1 vs. ExPASy TrEMBL
Match: A0A5A7SMQ7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00120 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.5e-127
Identity = 224/313 (71.57%), Postives = 261/313 (83.39%), Query Frame = 0


Query: 1   MKAWTETGQGYLVECRAIEGGVVLA---EKEKETEADVIPTNVQNVMKNFSDIFDSPETL 60
           +K W E   GYL+ECR++E   +     E+++ET+  +IP     ++  FSD+F+ PE L
Sbjct: 560 VKTWEEHDHGYLIECRSVEVAELKTSHKEEKEETKKKLIP-----ILDQFSDVFEWPEKL 619

Query: 61  PPRRVIEHHIHLKTGTDPVNVRPYRYAFQQKAEMEKLVDEMLTSEIIRPSSSPYSSPVLL 120
           PPRR IEH IHLK GT+PVNVRPYRYA+ QK EMEKLV+EML S IIRPS+SPYSSPVLL
Sbjct: 620 PPRRSIEHQIHLKEGTNPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSASPYSSPVLL 679

Query: 121 VKKKDGSWRFCMDYRALNNVTIPYKFPIPVIEELFDELNGANLFSKIDLKARYHQIRMHR 180
           VKKKDGSWRFC+DYRALNNVT+P KFPIPV+EELFDEL GA+LF+KIDLKA YHQIRM  
Sbjct: 680 VKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELGGASLFTKIDLKAGYHQIRMVD 739

Query: 181 EDIEKTAFRTHEGHNEFLVMPFGLTNAPATFQSLMNSIFRSYLRKFVLVFFDDILIYSRG 240
            DIEKTAFRTHEGH EFLVMPFGLTNAPATFQSLMNSIFR YLRKFVLVFFDDILIYSR 
Sbjct: 740 GDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNSIFRPYLRKFVLVFFDDILIYSRN 799

Query: 241 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWP 300
            E+H+ H+E+VF VLR+H+L+AN+KKCSF   +VEYLGH++S +GVE DPEKIK+I  WP
Sbjct: 800 WEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISNKGVEVDPEKIKAITNWP 859

Query: 301 VPSNVRELRGFLG 311
            P+NVRE RGFLG
Sbjct: 860 KPTNVRETRGFLG 867

[Close]

BLAST of Cmc11g0304921.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.1e-16
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 244 HLELVFEVLREHKLYANKKKCSFAFQRVEYLG--HIVSGQGVEADPEKIKSIKQWPVPSN 303
           HL +V ++  +H+ YAN+KKC+F   ++ YLG  HI+SG+GV ADP K++++  WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 304 VRELRGFLG 311
             ELRGFLG
Sbjct: 63  TTELRGFLG 71

[Close]

BLAST of Cmc11g0304921.1 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 87  QKAEMEKLVDEMLTSEIIRPSSSPYSSPVLLVKKKDGSW 126
           ++  ++  + EML + II+PS SPYSSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc11g0304921.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061363.1	5.0e-141	80.00	peroxidase 64 [Cucumis melo var. makuwa] >TYK14718.1 peroxidase 64 [Cucumis melo...	[more]
KAA0037155.1	6.3e-136	79.40	peroxidase 64 [Cucumis melo var. makuwa] >TYK13918.1 peroxidase 64 [Cucumis melo...	[more]
TYK30083.1	1.2e-126	71.57	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK22240.1	1.2e-126	71.57	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0065392.1	1.6e-126	71.57	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0304921.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	8.2e-54	42.80	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q99315	1.4e-53	42.31	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.4e-53	42.31	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	4.1e-53	42.46	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.5e-52	38.63	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc11g0304921.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CU29	2.4e-141	80.00	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00500 ...	[more]
A0A5A7T6Q1	3.0e-136	79.40	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001160...	[more]
A0A5D3E1V9	5.8e-127	71.57	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DFT1	5.8e-127	71.57	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7SMQ7	7.5e-127	71.57	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc11g0304921.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.1e-16	50.72	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	2.9e-06	56.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 118..277 e-value: 2.9E-31 score: 108.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 99..278 score: 16.378252
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 63..203 e-value: 3.1E-92 score: 309.7
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 25..229
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 25..229
None	No IPR available	CDD	cd01647	RT_LTR	coord: 115..278 e-value: 2.87866E-88 score: 259.835
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 143..278 e-value: 3.1E-92 score: 309.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 44..310

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0304921	Cmc11g0304921	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0304921.1-exon	Cmc11g0304921.1-exon-CMiso1.1chr11:26241432..26242364	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0304921.1-cds	Cmc11g0304921.1-cds-CMiso1.1chr11:26241432..26242364	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0304921.1	Cmc11g0304921.1-protein	polypeptide