Cmc11g0297241.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0297241.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr11: 16208636 .. 16210718 (+)
Sequence length	1708
RNA-Seq Expression	Cmc11g0297241.1
Synteny	Cmc11g0297241.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTATAGATGTTCTGAGCATATTTATTTGAATTTTGTTTTTGTTTTTCTTCTCCAGCTGTTTGTTATAGTGATCAATAATGGTTTAATTTTCCTGATTTGATTCAATCCATCTTTTTGAGACTTTGTGGAGCTAAGTCCCTGTTTTGTTATTGAATCTTATGTTCTGTTAATTTGTTTTGGCCTTTTTCGTATGTCTTTGTTCTTTAAACAGAGAATTCAAATAAGCAAGAATGTACTGATCACTATAACGAATGATTCATAGAGAAAAAAAGATTCAAGTTCGGCTAGGAAATTAGTGAAATTAAAAAGATTCCAGATCTCCAGTGCGTTGATTTTTTTTCCTATGAAAGCAGAAGCTTTTGTGTCTTTGCAGAGCAGAAATAAATAAATGGGTTCAAGCTATCTACGTTTGGTTTCTTACAGTAAGCAATTGAGCTTTTATGCCAAACATGGCAGCCACGAGCAGACTCTTTCTCTTTTCCACCACATGCAGGCCTCACTAGCCCTTGCTTTAGACGCCCATGTCTTCTCTCTTGTTCTCAAGTCTTGCACCGCCCTCCGAAGACCACATTTGGGCATTGCCATCCATGCTCATTCCGCTAAATCCTCCTTACTCTCAAGCCCATTTGTTGCTTGTGCCCTTGTTGACATGTACGGAAAATCTTTGTCTGTTTCACTTGCACGAAAGTTGTTCGACGAAATTCCCCATAGAAGTGTTGTTGTGTGGAATGTCATGCTATCACTCTACGTGCACTCAAACATGTTATTTGGTGCTTTGCAATTGTTTGAAGCTATGGATGTCCCTCCAAATGCTTCGTCCTTCAATCCAATAGTTGCAGGGTTATCGAAATTGGAGGATGGATTCAAGGCCATTGCTTTCTATAGGCAAATGCAACAATGTGGGTTGAAGCCTAATTTAATTACCCTTCTTGCTTTATTACCTGCAAGTGTTGGAGTTGCATCTTTGGACTTGATTAAACAAATTCATGGTTTTGCCATGAGAAACGATATTGGTGGTCATCTTCAGTTAAGCAGTGGCCTTGTTGAGGCCTATGGACGATGCGGATGTCTCTCTTATGCGCACAATGTGTTTGATAATATGACAGAAAGAGATGTAGTTGCATGGAGCAGTTTAATATCAGCACATGCTCTTCATGGGGAAGCCAGTACTGCTTTAAACATCTTTCAACAAATGGAATTGAGTAAAGTGCAGCCTGATGCGATTACATTTATAGGGGTGTTGAAAGCTTGTAGTCACGTGGGGTTGGCTGATGAAGCATTGGATTATTTTAATCGTATGCAGAGAGATTATGGTCTGCAAGCAAGCAGTGATCATTATTCTTGTTTAGTAGATGTATTGAGCAGGGCAGGAAGATTACATGAGGCGCATGACATTATTCGTGAGATGCCAGTGAGGGTGACGGCTAAAGCTTGGGGAGCCCTTCTCGGGGCTTGTCGAATTTATGGAGAGTTAGAGCTGGCGGAGATTGCAGGGAAGGCTTTGTTTGAAATAGAGCCTGAAAATGCTGCGAATTATGTGCTGTTGGCTAAAATGTATGCAAGTGTAGGGAGGCATGAGGAGGCTCAAAGAATGAGGAGGGAAATGAAAGAGAGGAGAGTTAAGGTAGTACCTGGAAGTAGTTGGGTTGTTTATCAGGATTGATTGAGAACCGTTGATGGGTTCTTAATGTAGTATTTGAGAAGTGTGTGTTTATTACTTGAAGAAATTAAATTAATAATTTGGTTGAGACGTGATGATAGCATCCAACGTATCTGAGATGTTGTGAAGCCAGATCCTGCTTCAGGGAGAACATACACAGTGAAACGACATTTACATGAGTTACGGGCCATTTGGATCGAGAAAATTGAGATGAGAATAAGATTAGTGGTAATTAAGAATGTCTAGAAATAATCAGTCTTGAAATAAGATCGTTGGAAATTTAGGATGTATGTGTTTAGTTGTGTATGGGAATGTTATTAAAAATTTATGAGAACAAATTCTTTTCTATTTCACTTGTAAAATTTAATTTTGAGAAAATTTAAATGAGTAATTTGATATATGGGTGTAAATGAGTTGGGTTG

mRNA sequence

ACAGAAATAAATAAATGGGTTCAAGCTATCTACGTTTGGTTTCTTACAGTAAGCAATTGAGCTTTTATGCCAAACATGGCAGCCACGAGCAGACTCTTTCTCTTTTCCACCACATGCAGGCCTCACTAGCCCTTGCTTTAGACGCCCATGTCTTCTCTCTTGTTCTCAAGTCTTGCACCGCCCTCCGAAGACCACATTTGGGCATTGCCATCCATGCTCATTCCGCTAAATCCTCCTTACTCTCAAGCCCATTTGTTGCTTGTGCCCTTGTTGACATGTACGGAAAATCTTTGTCTGTTTCACTTGCACGAAAGTTGTTCGACGAAATTCCCCATAGAAGTGTTGTTGTGTGGAATGTCATGCTATCACTCTACGTGCACTCAAACATGTTATTTGGTGCTTTGCAATTGTTTGAAGCTATGGATGTCCCTCCAAATGCTTCGTCCTTCAATCCAATAGTTGCAGGGTTATCGAAATTGGAGGATGGATTCAAGGCCATTGCTTTCTATAGGCAAATGCAACAATGTGGGTTGAAGCCTAATTTAATTACCCTTCTTGCTTTATTACCTGCAAGTGTTGGAGTTGCATCTTTGGACTTGATTAAACAAATTCATGGTTTTGCCATGAGAAACGATATTGGTGGTCATCTTCAGTTAAGCAGTGGCCTTGTTGAGGCCTATGGACGATGCGGATGTCTCTCTTATGCGCACAATGTGTTTGATAATATGACAGAAAGAGATGTAGTTGCATGGAGCAGTTTAATATCAGCACATGCTCTTCATGGGGAAGCCAGTACTGCTTTAAACATCTTTCAACAAATGGAATTGAGTAAAGTGCAGCCTGATGCGATTACATTTATAGGGGTGTTGAAAGCTTGTAGTCACGTGGGGTTGGCTGATGAAGCATTGGATTATTTTAATCGTATGCAGAGAGATTATGGTCTGCAAGCAAGCAGTGATCATTATTCTTGTTTAGTAGATGTATTGAGCAGGGCAGGAAGATTACATGAGGCGCATGACATTATTCGTGAGATGCCAGTGAGGGTGACGGCTAAAGCTTGGGGAGCCCTTCTCGGGGCTTGTCGAATTTATGGAGAGTTAGAGCTGGCGGAGATTGCAGGGAAGGCTTTGTTTGAAATAGAGCCTGAAAATGCTGCGAATTATGTGCTGTTGGCTAAAATGTATGCAAGTGTAGGGAGGCATGAGGAGGCTCAAAGAATGAGGAGGGAAATGAAAGAGAGGAGAGTTAAGGTAGTACCTGGAAGTAGTTGGGTTGTTTATCAGGATTGATTGAGAACCGTTGATGGGTTCTTAATGTAGTATTTGAGAAGTGTGTGTTTATTACTTGAAGAAATTAAATTAATAATTTGGTTGAGACGTGATGATAGCATCCAACGTATCTGAGATGTTGTGAAGCCAGATCCTGCTTCAGGGAGAACATACACAGTGAAACGACATTTACATGAGTTACGGGCCATTTGGATCGAGAAAATTGAGATGAGAATAAGATTAGTGGTAATTAAGAATGTCTAGAAATAATCAGTCTTGAAATAAGATCGTTGGAAATTTAGGATGTATGTGTTTAGTTGTGTATGGGAATGTTATTAAAAATTTATGAGAACAAATTCTTTTCTATTTCACTTGTAAAATTTAATTTTGAGAAAATTTAAATGAGTAATTTGATATATGGGTGTAAATGAGTTGGGTTG

Coding sequence (CDS)

ATGGGTTCAAGCTATCTACGTTTGGTTTCTTACAGTAAGCAATTGAGCTTTTATGCCAAACATGGCAGCCACGAGCAGACTCTTTCTCTTTTCCACCACATGCAGGCCTCACTAGCCCTTGCTTTAGACGCCCATGTCTTCTCTCTTGTTCTCAAGTCTTGCACCGCCCTCCGAAGACCACATTTGGGCATTGCCATCCATGCTCATTCCGCTAAATCCTCCTTACTCTCAAGCCCATTTGTTGCTTGTGCCCTTGTTGACATGTACGGAAAATCTTTGTCTGTTTCACTTGCACGAAAGTTGTTCGACGAAATTCCCCATAGAAGTGTTGTTGTGTGGAATGTCATGCTATCACTCTACGTGCACTCAAACATGTTATTTGGTGCTTTGCAATTGTTTGAAGCTATGGATGTCCCTCCAAATGCTTCGTCCTTCAATCCAATAGTTGCAGGGTTATCGAAATTGGAGGATGGATTCAAGGCCATTGCTTTCTATAGGCAAATGCAACAATGTGGGTTGAAGCCTAATTTAATTACCCTTCTTGCTTTATTACCTGCAAGTGTTGGAGTTGCATCTTTGGACTTGATTAAACAAATTCATGGTTTTGCCATGAGAAACGATATTGGTGGTCATCTTCAGTTAAGCAGTGGCCTTGTTGAGGCCTATGGACGATGCGGATGTCTCTCTTATGCGCACAATGTGTTTGATAATATGACAGAAAGAGATGTAGTTGCATGGAGCAGTTTAATATCAGCACATGCTCTTCATGGGGAAGCCAGTACTGCTTTAAACATCTTTCAACAAATGGAATTGAGTAAAGTGCAGCCTGATGCGATTACATTTATAGGGGTGTTGAAAGCTTGTAGTCACGTGGGGTTGGCTGATGAAGCATTGGATTATTTTAATCGTATGCAGAGAGATTATGGTCTGCAAGCAAGCAGTGATCATTATTCTTGTTTAGTAGATGTATTGAGCAGGGCAGGAAGATTACATGAGGCGCATGACATTATTCGTGAGATGCCAGTGAGGGTGACGGCTAAAGCTTGGGGAGCCCTTCTCGGGGCTTGTCGAATTTATGGAGAGTTAGAGCTGGCGGAGATTGCAGGGAAGGCTTTGTTTGAAATAGAGCCTGAAAATGCTGCGAATTATGTGCTGTTGGCTAAAATGTATGCAAGTGTAGGGAGGCATGAGGAGGCTCAAAGAATGAGGAGGGAAATGAAAGAGAGGAGAGTTAAGGTAGTACCTGGAAGTAGTTGGGTTGTTTATCAGGATTGA

Protein sequence

MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD

Homology

[Close]

BLAST of Cmc11g0297241.1 vs. NCBI nr
Match: XP_008448216.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900559.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900560.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900561.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900562.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo] >XP_016900563.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis melo])

HSP 1 Score: 833.9 bits (2153), Expect = 6.0e-238
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]

BLAST of Cmc11g0297241.1 vs. NCBI nr
Match: XP_031743918.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >XP_031743919.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >XP_031743920.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >XP_031743921.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >KGN46687.1 hypothetical protein Csa_020798 [Cucumis sativus])

HSP 1 Score: 808.9 bits (2088), Expect = 2.1e-230
Identity = 410/424 (96.70%), Postives = 417/424 (98.35%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGSSYLRL+SY+KQLSFYA HG+HEQTLSLFHHMQASLAL LDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSV+LARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VH+NMLFGALQLFEAMDVPPNASSFN IVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIG HLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQME  KVQPD ITFIGVLKACSHVGLA+EALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA+DIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]

BLAST of Cmc11g0297241.1 vs. NCBI nr
Match: ADN33897.1 (pentatricopeptide (PPR) repeat-containing protein [Cucumis melo subsp. melo] >KAA0047897.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK02174.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 770.0 bits (1987), Expect = 1.1e-218
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 34  MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 93
           MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL
Sbjct: 1   MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 60

Query: 94  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 153
           SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS
Sbjct: 61  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 120

Query: 154 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 213
           KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ
Sbjct: 121 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 180

Query: 214 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 273
           LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK
Sbjct: 181 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 240

Query: 274 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 333
           VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA
Sbjct: 241 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 300

Query: 334 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 393
           HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV
Sbjct: 301 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 360

Query: 394 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           GRHEEAQRMRREMKERRVKVVPGSSWVVYQD
Sbjct: 361 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391

[Close]

BLAST of Cmc11g0297241.1 vs. NCBI nr
Match: XP_038902010.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Benincasa hispida])

HSP 1 Score: 761.1 bits (1964), Expect = 4.9e-216
Identity = 384/424 (90.57%), Postives = 403/424 (95.05%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGS+YLRL+SY+KQLSFYA HG+HEQ LSLFHHMQ SLAL LDAHVFSLVLKSCTA+RR 
Sbjct: 1   MGSNYLRLLSYTKQLSFYANHGNHEQALSLFHHMQTSLALDLDAHVFSLVLKSCTAIRRS 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           +LG AIHAHS KSSLLSSPFVACALVDMYGKSLS+SLARKLFDEIPHRSVVVWN MLSLY
Sbjct: 61  YLGTAIHAHSVKSSLLSSPFVACALVDMYGKSLSISLARKLFDEIPHRSVVVWNAMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
            HSNMLF AL+LFEA+DVPPN SSFNPI+AGLSKLEDGFKAIAFYRQMQQ GLKPNLITL
Sbjct: 121 AHSNMLFDALRLFEAIDVPPNTSSFNPIIAGLSKLEDGFKAIAFYRQMQQYGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLP SVGVASLDLIKQIHGFAMR+D+G + QLS GLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPTSVGVASLDLIKQIHGFAMRSDMGCNPQLSCGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISAHALHGEA TALNIFQQMEL KVQPD ITFIGVLKACSHVGLADEALDY
Sbjct: 241 RDVVAWSSLISAHALHGEARTALNIFQQMELGKVQPDEITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           F+RMQRDYGLQA+SDHYSCLVDVLSRAGRL+EA+ IIREMPVR TAKAWGALLGACRIYG
Sbjct: 301 FSRMQRDYGLQANSDHYSCLVDVLSRAGRLYEAYGIIREMPVRATAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           +LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMK+RRVKVVPGSSWV
Sbjct: 361 DLELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKKRRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]

BLAST of Cmc11g0297241.1 vs. NCBI nr
Match: XP_022944604.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moschata] >XP_022944605.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moschata])

HSP 1 Score: 749.2 bits (1933), Expect = 1.9e-212
Identity = 377/424 (88.92%), Postives = 399/424 (94.10%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGS+YLRL+SY+KQLSFYA HG+HEQ L+LFHHMQASLALALDAHVFSLVLKSCTA+RRP
Sbjct: 1   MGSNYLRLLSYTKQLSFYANHGNHEQALALFHHMQASLALALDAHVFSLVLKSCTAIRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           HLG AIHAH+ KSSLLSSPFVACALVDMYGKS+SV LARKLFDEIPHR+VV WN MLSLY
Sbjct: 61  HLGTAIHAHATKSSLLSSPFVACALVDMYGKSMSVPLARKLFDEIPHRTVVAWNAMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
            HSNML  AL+LFEAMDVPPN SSFNPI+AGL  L+DGFKAIAFYR+MQQCGLKPNLITL
Sbjct: 121 THSNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVA+LDLIKQIHGFAMRND+G H QLSSGLVEAYGRCGCL+YAHNVFD M E
Sbjct: 181 LALLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISA+ALHGEA TALNIFQQMEL KVQPD ITFIGVLKACSHVGLADEALDY
Sbjct: 241 RDVVAWSSLISAYALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           F+RMQRDYGLQASSDHYSCLVD LSRAGRLHEA++IIREMPVRVTAKAWGALLGACR YG
Sbjct: 301 FSRMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWV
Sbjct: 361 ELELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 422

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy Swiss-Prot
Match: Q9LR72 (Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E3 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 7.1e-149
Identity = 272/423 (64.30%), Postives = 323/423 (76.36%), Query Frame = 0


Query: 3   SSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHL 62
           SS  +L+S +KQLS YA  G+HEQ L+LF  M +S AL LDAHVFSL LKSC A  RP L
Sbjct: 7   SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66

Query: 63  GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVH 122
           G ++HAHS KS+ LS+PFV CAL+DMYGK LSVS ARKLFDEIP R+ VVWN M+S Y H
Sbjct: 67  GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126

Query: 123 SNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDG-FKAIAFYRQMQQCGLKPNLITLL 182
              +  A++L+EAMDV PN SSFN I+ GL   EDG ++AI FYR+M +   KPNLITLL
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186

Query: 183 ALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTER 242
           AL+ A   + +  LIK+IH +A RN I  H QL SGLVEAYGRCG + Y   VFD+M +R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246

Query: 243 DVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYF 302
           DVVAWSSLISA+ALHG+A +AL  FQ+MEL+KV PD I F+ VLKACSH GLADEAL YF
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306

Query: 303 NRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGE 362
            RMQ DYGL+AS DHYSCLVDVLSR GR  EA+ +I+ MP + TAK WGALLGACR YGE
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366

Query: 363 LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVV 422
           +ELAEIA + L  +EPEN ANYVLL K+Y SVGR EEA+R+R +MKE  VKV PGSSW +
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426

Query: 423 YQD 425
           ++D
Sbjct: 427 FKD 429

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.0e-74
Identity = 144/378 (38.10%), Postives = 229/378 (60.58%), Query Frame = 0


Query: 43  DAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLF 102
           D   F  + KSC +L   +LG  +H H  K           AL+DMY K   +  A K+F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167

Query: 103 DEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAI 162
           DE+  R V+ WN +LS Y     +  A  LF  M +     S+  +++G + +    +A+
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM-LDKTIVSWTAMISGYTGIGCYVEAM 227

Query: 163 AFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAY 222
            F+R+MQ  G++P+ I+L+++LP+   + SL+L K IH +A R        + + L+E Y
Sbjct: 228 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 287

Query: 223 GRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFI 282
            +CG +S A  +F  M  +DV++WS++IS +A HG A  A+  F +M+ +KV+P+ ITF+
Sbjct: 288 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 347

Query: 283 GVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPV 342
           G+L ACSHVG+  E L YF+ M++DY ++   +HY CL+DVL+RAG+L  A +I + MP+
Sbjct: 348 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 407

Query: 343 RVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRM 402
           +  +K WG+LL +CR  G L++A +A   L E+EPE+  NYVLLA +YA +G+ E+  R+
Sbjct: 408 KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRL 467

Query: 403 RREMKERRVKVVPGSSWV 421
           R+ ++   +K  PG S +
Sbjct: 468 RKMIRNENMKKTPGGSLI 484

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy Swiss-Prot
Match: Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 270.0 bits (689), Expect = 4.5e-71
Identity = 144/416 (34.62%), Postives = 242/416 (58.17%), Query Frame = 0


Query: 8   LVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIH 67
           +VS++  LS + + G H++ + +F  +   L    D    S VL S       ++G  IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 276

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLF 127
            +  K  LL    V  A++DMYGKS  V     LF++       V N  ++    + ++ 
Sbjct: 277 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 336

Query: 128 GALQLFE---AMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALL 187
            AL++FE      +  N  S+  I+AG ++     +A+  +R+MQ  G+KPN +T+ ++L
Sbjct: 337 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 396

Query: 188 PASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVV 247
           PA   +A+L   +  HGFA+R  +  ++ + S L++ Y +CG ++ +  VF+ M  +++V
Sbjct: 397 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 456

Query: 248 AWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRM 307
            W+SL++  ++HG+A   ++IF+ +  ++++PD I+F  +L AC  VGL DE   YF  M
Sbjct: 457 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 516

Query: 308 QRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGELEL 367
             +YG++   +HYSC+V++L RAG+L EA+D+I+EMP    +  WGALL +CR+   ++L
Sbjct: 517 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 576

Query: 368 AEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
           AEIA + LF +EPEN   YVLL+ +YA+ G   E   +R +M+   +K  PG SW+
Sbjct: 577 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy Swiss-Prot
Match: Q9ZUT5 (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E49 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-69
Identity = 138/413 (33.41%), Postives = 239/413 (57.87%), Query Frame = 0


Query: 8   LVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIH 67
           +VS++  +S Y++ GS E    ++  M A      +      V ++C        G+ +H
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLF 127
               ++ +     +  A++  Y K  S+  AR LFDE+  +  V +  ++S Y+   ++ 
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317

Query: 128 GALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPAS 187
            A+ LF  M+     S++N +++GL +     + I  +R+M +CG +PN +TL +LLP+ 
Sbjct: 318 EAMALFSEME-SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 377

Query: 188 VGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWS 247
              ++L   K+IH FA+RN    ++ +++ +++ Y + G L  A  VFDN  +R ++AW+
Sbjct: 378 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 437

Query: 248 SLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRMQRD 307
           ++I+A+A+HG++ +A ++F QM+    +PD +T   VL A +H G +D A   F+ M   
Sbjct: 438 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 497

Query: 308 YGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGELELAEI 367
           Y ++   +HY+C+V VLSRAG+L +A + I +MP+   AK WGALL    + G+LE+A  
Sbjct: 498 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF 557

Query: 368 AGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
           A   LFE+EPEN  NY ++A +Y   GR EEA+ +R +MK   +K +PG+SW+
Sbjct: 558 ACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 9.4e-69
Identity = 144/415 (34.70%), Postives = 236/415 (56.87%), Query Frame = 0


Query: 11  YSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHS 70
           ++  ++ Y+++   ++ L LF  M+ S  L  ++   + V+ +C          AIH   
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 71  AKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGAL 130
            K  L    FV   L+DMY +   + +A ++F ++  R +V WN M++ YV S     AL
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491

Query: 131 QLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGV 190
            L   M      +    +  G S++                 LKPN ITL+ +LP+   +
Sbjct: 492 LLLHKMQ-----NLERKVSKGASRV----------------SLKPNSITLMTILPSCAAL 551

Query: 191 ASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLI 250
           ++L   K+IH +A++N++   + + S LV+ Y +CGCL  +  VFD + +++V+ W+ +I
Sbjct: 552 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 611

Query: 251 SAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGL 310
            A+ +HG    A+++ + M +  V+P+ +TFI V  ACSH G+ DE L  F  M+ DYG+
Sbjct: 612 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 671

Query: 311 QASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVT-AKAWGALLGACRIYGELELAEIAG 370
           + SSDHY+C+VD+L RAGR+ EA+ ++  MP     A AW +LLGA RI+  LE+ EIA 
Sbjct: 672 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 731

Query: 371 KALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           + L ++EP  A++YVLLA +Y+S G  ++A  +RR MKE+ V+  PG SW+ + D
Sbjct: 732 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy TrEMBL
Match: A0A1S4DX62 (putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucumis melo OX=3656 GN=LOC103490472 PE=4 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 2.9e-238
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy TrEMBL
Match: A0A0A0KE48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124020 PE=4 SV=1)

HSP 1 Score: 808.9 bits (2088), Expect = 1.0e-230
Identity = 410/424 (96.70%), Postives = 417/424 (98.35%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGSSYLRL+SY+KQLSFYA HG+HEQTLSLFHHMQASLAL LDAHVFSLVLKSCTALRRP
Sbjct: 1   MGSSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSV+LARKLFDEIPHRSVVVWNVMLSLY
Sbjct: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
           VH+NMLFGALQLFEAMDVPPNASSFN IVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL
Sbjct: 121 VHANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVASLDLIKQIHGFAMRNDIG HLQLSSGLVEAYGRCGCLSYAHNVFDNMTE
Sbjct: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISAHALHGEASTALNIFQQME  KVQPD ITFIGVLKACSHVGLA+EALDY
Sbjct: 241 RDVVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA+DIIREMPVRVTAKAWGALLGACRIYG
Sbjct: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV
Sbjct: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 424

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy TrEMBL
Match: A0A5A7U106 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00720 PE=4 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 5.1e-219
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 34  MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 93
           MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL
Sbjct: 1   MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 60

Query: 94  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 153
           SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS
Sbjct: 61  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 120

Query: 154 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 213
           KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ
Sbjct: 121 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 180

Query: 214 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 273
           LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK
Sbjct: 181 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 240

Query: 274 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 333
           VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA
Sbjct: 241 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 300

Query: 334 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 393
           HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV
Sbjct: 301 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 360

Query: 394 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           GRHEEAQRMRREMKERRVKVVPGSSWVVYQD
Sbjct: 361 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy TrEMBL
Match: E5GBQ5 (Pentatricopeptide (PPR) repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 5.1e-219
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 34  MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 93
           MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL
Sbjct: 1   MQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSL 60

Query: 94  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 153
           SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS
Sbjct: 61  SVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLS 120

Query: 154 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 213
           KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ
Sbjct: 121 KLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQ 180

Query: 214 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 273
           LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK
Sbjct: 181 LSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSK 240

Query: 274 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 333
           VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA
Sbjct: 241 VQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEA 300

Query: 334 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 393
           HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV
Sbjct: 301 HDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASV 360

Query: 394 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           GRHEEAQRMRREMKERRVKVVPGSSWVVYQD
Sbjct: 361 GRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391

[Close]

BLAST of Cmc11g0297241.1 vs. ExPASy TrEMBL
Match: A0A6J1FYR9 (putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucurbita moschata OX=3662 GN=LOC111449013 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 9.4e-213
Identity = 377/424 (88.92%), Postives = 399/424 (94.10%), Query Frame = 0


Query: 1   MGSSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRP 60
           MGS+YLRL+SY+KQLSFYA HG+HEQ L+LFHHMQASLALALDAHVFSLVLKSCTA+RRP
Sbjct: 1   MGSNYLRLLSYTKQLSFYANHGNHEQALALFHHMQASLALALDAHVFSLVLKSCTAIRRP 60

Query: 61  HLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLY 120
           HLG AIHAH+ KSSLLSSPFVACALVDMYGKS+SV LARKLFDEIPHR+VV WN MLSLY
Sbjct: 61  HLGTAIHAHATKSSLLSSPFVACALVDMYGKSMSVPLARKLFDEIPHRTVVAWNAMLSLY 120

Query: 121 VHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITL 180
            HSNML  AL+LFEAMDVPPN SSFNPI+AGL  L+DGFKAIAFYR+MQQCGLKPNLITL
Sbjct: 121 THSNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITL 180

Query: 181 LALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTE 240
           LALLPASVGVA+LDLIKQIHGFAMRND+G H QLSSGLVEAYGRCGCL+YAHNVFD M E
Sbjct: 181 LALLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHE 240

Query: 241 RDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDY 300
           RDVVAWSSLISA+ALHGEA TALNIFQQMEL KVQPD ITFIGVLKACSHVGLADEALDY
Sbjct: 241 RDVVAWSSLISAYALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDY 300

Query: 301 FNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYG 360
           F+RMQRDYGLQASSDHYSCLVD LSRAGRLHEA++IIREMPVRVTAKAWGALLGACR YG
Sbjct: 301 FSRMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYG 360

Query: 361 ELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 420
           ELELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWV
Sbjct: 361 ELELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWV 420

Query: 421 VYQD 425
           VYQD
Sbjct: 421 VYQD 422

[Close]

BLAST of Cmc11g0297241.1 vs. TAIR 10
Match: AT1G03510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 528.5 bits (1360), Expect = 5.0e-150
Identity = 272/423 (64.30%), Postives = 323/423 (76.36%), Query Frame = 0


Query: 3   SSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHL 62
           SS  +L+S +KQLS YA  G+HEQ L+LF  M +S AL LDAHVFSL LKSC A  RP L
Sbjct: 7   SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66

Query: 63  GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVH 122
           G ++HAHS KS+ LS+PFV CAL+DMYGK LSVS ARKLFDEIP R+ VVWN M+S Y H
Sbjct: 67  GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126

Query: 123 SNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDG-FKAIAFYRQMQQCGLKPNLITLL 182
              +  A++L+EAMDV PN SSFN I+ GL   EDG ++AI FYR+M +   KPNLITLL
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186

Query: 183 ALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTER 242
           AL+ A   + +  LIK+IH +A RN I  H QL SGLVEAYGRCG + Y   VFD+M +R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246

Query: 243 DVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYF 302
           DVVAWSSLISA+ALHG+A +AL  FQ+MEL+KV PD I F+ VLKACSH GLADEAL YF
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306

Query: 303 NRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGE 362
            RMQ DYGL+AS DHYSCLVDVLSR GR  EA+ +I+ MP + TAK WGALLGACR YGE
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366

Query: 363 LELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVV 422
           +ELAEIA + L  +EPEN ANYVLL K+Y SVGR EEA+R+R +MKE  VKV PGSSW +
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426

Query: 423 YQD 425
           ++D
Sbjct: 427 FKD 429

[Close]

BLAST of Cmc11g0297241.1 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-75
Identity = 144/378 (38.10%), Postives = 229/378 (60.58%), Query Frame = 0


Query: 43  DAHVFSLVLKSCTALRRPHLGIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLF 102
           D   F  + KSC +L   +LG  +H H  K           AL+DMY K   +  A K+F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167

Query: 103 DEIPHRSVVVWNVMLSLYVHSNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAI 162
           DE+  R V+ WN +LS Y     +  A  LF  M +     S+  +++G + +    +A+
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM-LDKTIVSWTAMISGYTGIGCYVEAM 227

Query: 163 AFYRQMQQCGLKPNLITLLALLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAY 222
            F+R+MQ  G++P+ I+L+++LP+   + SL+L K IH +A R        + + L+E Y
Sbjct: 228 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 287

Query: 223 GRCGCLSYAHNVFDNMTERDVVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFI 282
            +CG +S A  +F  M  +DV++WS++IS +A HG A  A+  F +M+ +KV+P+ ITF+
Sbjct: 288 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 347

Query: 283 GVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPV 342
           G+L ACSHVG+  E L YF+ M++DY ++   +HY CL+DVL+RAG+L  A +I + MP+
Sbjct: 348 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 407

Query: 343 RVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRM 402
           +  +K WG+LL +CR  G L++A +A   L E+EPE+  NYVLLA +YA +G+ E+  R+
Sbjct: 408 KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRL 467

Query: 403 RREMKERRVKVVPGSSWV 421
           R+ ++   +K  PG S +
Sbjct: 468 RKMIRNENMKKTPGGSLI 484

[Close]

BLAST of Cmc11g0297241.1 vs. TAIR 10
Match: AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 270.0 bits (689), Expect = 3.2e-72
Identity = 144/416 (34.62%), Postives = 242/416 (58.17%), Query Frame = 0


Query: 8   LVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIH 67
           +VS++  LS + + G H++ + +F  +   L    D    S VL S       ++G  IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 276

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLF 127
            +  K  LL    V  A++DMYGKS  V     LF++       V N  ++    + ++ 
Sbjct: 277 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 336

Query: 128 GALQLFE---AMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALL 187
            AL++FE      +  N  S+  I+AG ++     +A+  +R+MQ  G+KPN +T+ ++L
Sbjct: 337 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 396

Query: 188 PASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVV 247
           PA   +A+L   +  HGFA+R  +  ++ + S L++ Y +CG ++ +  VF+ M  +++V
Sbjct: 397 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 456

Query: 248 AWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRM 307
            W+SL++  ++HG+A   ++IF+ +  ++++PD I+F  +L AC  VGL DE   YF  M
Sbjct: 457 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 516

Query: 308 QRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGELEL 367
             +YG++   +HYSC+V++L RAG+L EA+D+I+EMP    +  WGALL +CR+   ++L
Sbjct: 517 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 576

Query: 368 AEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
           AEIA + LF +EPEN   YVLL+ +YA+ G   E   +R +M+   +K  PG SW+
Sbjct: 577 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631

[Close]

BLAST of Cmc11g0297241.1 vs. TAIR 10
Match: AT2G37310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-70
Identity = 138/413 (33.41%), Postives = 239/413 (57.87%), Query Frame = 0


Query: 8   LVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIH 67
           +VS++  +S Y++ GS E    ++  M A      +      V ++C        G+ +H
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257

Query: 68  AHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLF 127
               ++ +     +  A++  Y K  S+  AR LFDE+  +  V +  ++S Y+   ++ 
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317

Query: 128 GALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPAS 187
            A+ LF  M+     S++N +++GL +     + I  +R+M +CG +PN +TL +LLP+ 
Sbjct: 318 EAMALFSEME-SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 377

Query: 188 VGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWS 247
              ++L   K+IH FA+RN    ++ +++ +++ Y + G L  A  VFDN  +R ++AW+
Sbjct: 378 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 437

Query: 248 SLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRMQRD 307
           ++I+A+A+HG++ +A ++F QM+    +PD +T   VL A +H G +D A   F+ M   
Sbjct: 438 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 497

Query: 308 YGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGELELAEI 367
           Y ++   +HY+C+V VLSRAG+L +A + I +MP+   AK WGALL    + G+LE+A  
Sbjct: 498 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF 557

Query: 368 AGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 421
           A   LFE+EPEN  NY ++A +Y   GR EEA+ +R +MK   +K +PG+SW+
Sbjct: 558 ACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609

[Close]

BLAST of Cmc11g0297241.1 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 262.3 bits (669), Expect = 6.7e-70
Identity = 144/415 (34.70%), Postives = 236/415 (56.87%), Query Frame = 0


Query: 11  YSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHLGIAIHAHS 70
           ++  ++ Y+++   ++ L LF  M+ S  L  ++   + V+ +C          AIH   
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 71  AKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVHSNMLFGAL 130
            K  L    FV   L+DMY +   + +A ++F ++  R +V WN M++ YV S     AL
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491

Query: 131 QLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLALLPASVGV 190
            L   M      +    +  G S++                 LKPN ITL+ +LP+   +
Sbjct: 492 LLLHKMQ-----NLERKVSKGASRV----------------SLKPNSITLMTILPSCAAL 551

Query: 191 ASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLI 250
           ++L   K+IH +A++N++   + + S LV+ Y +CGCL  +  VFD + +++V+ W+ +I
Sbjct: 552 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 611

Query: 251 SAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGL 310
            A+ +HG    A+++ + M +  V+P+ +TFI V  ACSH G+ DE L  F  M+ DYG+
Sbjct: 612 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 671

Query: 311 QASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVT-AKAWGALLGACRIYGELELAEIAG 370
           + SSDHY+C+VD+L RAGR+ EA+ ++  MP     A AW +LLGA RI+  LE+ EIA 
Sbjct: 672 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 731

Query: 371 KALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 425
           + L ++EP  A++YVLLA +Y+S G  ++A  +RR MKE+ V+  PG SW+ + D
Sbjct: 732 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765

The following BLAST results are available for this feature:

BLAST of Cmc11g0297241.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448216.1	6.0e-238	100.00	PREDICTED: putative pentatricopeptide repeat-containing protein At1g03510 [Cucum...	[more]
XP_031743918.1	2.1e-230	96.70	putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus]...	[more]
ADN33897.1	1.1e-218	100.00	pentatricopeptide (PPR) repeat-containing protein [Cucumis melo subsp. melo] >KA...	[more]
XP_038902010.1	4.9e-216	90.57	putative pentatricopeptide repeat-containing protein At1g03510 [Benincasa hispid...	[more]
XP_022944604.1	1.9e-212	88.92	putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moscha...	[more]

BLAST of Cmc11g0297241.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LR72	7.1e-149	64.30	Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis th...	[more]
Q9SIL5	2.0e-74	38.10	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9LNU6	4.5e-71	34.62	Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX...	[more]
Q9ZUT5	1.9e-69	33.41	Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana OX...	[more]
Q7Y211	9.4e-69	34.70	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]

BLAST of Cmc11g0297241.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DX62	2.9e-238	100.00	putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucumis melo O...	[more]
A0A0A0KE48	1.0e-230	96.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124020 PE=4 SV=1	[more]
A0A5A7U106	5.1e-219	100.00	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
E5GBQ5	5.1e-219	100.00	Pentatricopeptide (PPR) repeat-containing protein OS=Cucumis melo subsp. melo OX...	[more]
A0A6J1FYR9	9.4e-213	88.92	putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucurbita mosc...	[more]

BLAST of Cmc11g0297241.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03510.1	5.0e-150	64.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	1.4e-75	38.10	mitochondrial editing factor 21	[more]
AT1G20230.1	3.2e-72	34.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G37310.1	1.3e-70	33.41	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G57430.1	6.7e-70	34.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 241..289 e-value: 6.4E-8 score: 32.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 244..278 e-value: 7.3E-5 score: 20.7 coord: 144..176 e-value: 1.5E-4 score: 19.7 coord: 280..309 e-value: 0.0014 score: 16.7 coord: 317..340 e-value: 4.1E-4 score: 18.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 144..173 e-value: 0.21 score: 11.9 coord: 383..410 e-value: 0.026 score: 14.8 coord: 111..136 e-value: 0.0012 score: 18.9 coord: 316..341 e-value: 0.0017 score: 18.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 242..276 score: 10.325603
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..175 score: 9.558311
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 379..413 score: 9.284279
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 215..379 e-value: 2.3E-36 score: 127.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 8..214 e-value: 7.7E-27 score: 96.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 216..403
None	No IPR available	PANTHER	PTHR24015:SF858	OS03G0852000 PROTEIN	coord: 5..422
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 5..422

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0297241	Cmc11g0297241	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0297241.1-exon	Cmc11g0297241.1-exon-CMiso1.1chr11:16208636..16208636	exon
Cmc11g0297241.1-exon	Cmc11g0297241.1-exon-CMiso1.1chr11:16209012..16210718	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0297241.1-five_prime_utr	Cmc11g0297241.1-five_prime_utr-CMiso1.1chr11:16208636..16208636	five_prime_UTR
Cmc11g0297241.1-five_prime_utr	Cmc11g0297241.1-five_prime_utr-CMiso1.1chr11:16209012..16209024	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0297241.1-cds	Cmc11g0297241.1-cds-CMiso1.1chr11:16209025..16210299	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0297241.1-three_prime_utr	Cmc11g0297241.1-three_prime_utr-CMiso1.1chr11:16210300..16210718	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0297241.1	Cmc11g0297241.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding