Cmc11g0296291.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0296291.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 14412739 .. 14414685 (-)
Sequence length	1563
RNA-Seq Expression	Cmc11g0296291.1
Synteny	Cmc11g0296291.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAAGTGAGCTTAAAGAATTGAAGATGCAATTACAAGAACATGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATATGTAACAAGTATCCTTTACCACGCATCGATGACATATTTGATCAATTAAGGGGAGCAGCATTATTCTCTAAGATTGACTTAAGGTCAGGATACCATCAGTTGAACGTTAGAGAATCAGATATTGCTAAGACAGCATTCAGAACGAGGTATGGGCATTATGAGTTTTGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGGTCTCATGAACAGGATCTTCTATTAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGCCAATGAGGAACATCTGAGGATTGTTTTACAGACTCTACGTGATAAACAGTTGTACGCTAAGTTTAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGGGTTAGTGTAGATCCATAAAAAGTGGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGAAACAGAAGTACGTAGTTTTCTGGGTTTGGCAAGATATTATAGGCGTGTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGAAAAAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTTTGGCACTTCCTGTAACATGGAAGGACTATGTGATTTATTGTGACGCTTCAAGGCTAGGATTAAGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATTCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGTAGAAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCATAGATCATAAAAGGTTGAAGTATATTTTTAATCAGAAAGAGCTAAATCTGAGACAAAGGCAATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCACCCAAGTAAGGCTAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCTAAAGAGTGCCTTGTATGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTTGGTCTTTTCTAGTAACTGAGATTGTAAGAAGCCAGTCAGAAGACAGTAATTTACAGAAGAAGCTTGGGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGTCATTGTTATACAGGGAAGATTATGTGTTCCGAATATCAATGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGTTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTCAACCAGTAAGACAGAGGCCAGAAGGATTTCTTAATCCTTTGCCTGTGCCAAAGTGGAAATGGGAGCATATTACTATGGATATTCTGTTTGGATTACCTCGTACATTCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTTTACCGGTTAAAGCGACATCTACGTTAGACCAACTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGATTCAGATAGGGATTCGAGGTTTACTTCTAAATTTTAG

mRNA sequence

ATGGCTCCAAGTGAGCTTAAAGAATTGAAGATGCAATTACAAGAACATGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATATGTAACAAGTATCCTTTACCACGCATCGATGACATATTTGATCAATTAAGGGGAGCAGCATTATTCTCTAAGATTGACTTAAGGTCAGGATACCATCAGTTGAACGTTAGAGAATCAGATATTGCTAAGACAGCATTCAGAACGAGGCGTGTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGAAAAAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTTTGGCACTTCCTGTAACATGGAAGGACTATGTGATTTATTGTGACGCTTCAAGGCTAGGATTAAGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATTCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGTAGAAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCATAGATCATAAAAGGTTGAAGTATATTTTTAATCAGAAAGAGCTAAATCTGAGACAAAGGCAATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCACCCAAGTAAGGCTAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCTAAAGAGTGCCTTGTATGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTTGGTCTTTTCTAGTAACTGAGATTGTAAGAAGCCAGTCAGAAGACAGTAATTTACAGAAGAAGCTTGGGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGTCATTGTTATACAGGGAAGATTATGTGTTCCGAATATCAATGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGTTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTCAACCAGTAAGACAGAGGCCAGAAGGATTTCTTAATCCTTTGCCTGTGCCAAAGTGGAAATGGGAGCATATTACTATGGATATTCTGTTTGGATTACCTCGTACATTCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTTTACCGGTTAAAGCGACATCTACGTTAGACCAACTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGATTCAGATAGGGATTCGAGGTTTACTTCTAAATTTTAG

Coding sequence (CDS)

ATGGCTCCAAGTGAGCTTAAAGAATTGAAGATGCAATTACAAGAACATGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATATGTAACAAGTATCCTTTACCACGCATCGATGACATATTTGATCAATTAAGGGGAGCAGCATTATTCTCTAAGATTGACTTAAGGTCAGGATACCATCAGTTGAACGTTAGAGAATCAGATATTGCTAAGACAGCATTCAGAACGAGGCGTGTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGAAAAAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTTTGGCACTTCCTGTAACATGGAAGGACTATGTGATTTATTGTGACGCTTCAAGGCTAGGATTAAGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATTCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGTAGAAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCATAGATCATAAAAGGTTGAAGTATATTTTTAATCAGAAAGAGCTAAATCTGAGACAAAGGCAATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCACCCAAGTAAGGCTAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCTAAAGAGTGCCTTGTATGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTTGGTCTTTTCTAGTAACTGAGATTGTAAGAAGCCAGTCAGAAGACAGTAATTTACAGAAGAAGCTTGGGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGTCATTGTTATACAGGGAAGATTATGTGTTCCGAATATCAATGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGTTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTCAACCAGTAAGACAGAGGCCAGAAGGATTTCTTAATCCTTTGCCTGTGCCAAAGTGGAAATGGGAGCATATTACTATGGATATTCTGTTTGGATTACCTCGTACATTCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTTTACCGGTTAAAGCGACATCTACGTTAGACCAACTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGATTCAGATAGGGATTCGAGGTTTACTTCTAAATTTTAG

Protein sequence

MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNKYPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTRRVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDILFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKIVSQYGVLVSIDSDRDSRFTSKF

Homology

[Close]

BLAST of Cmc11g0296291.1 vs. NCBI nr
Match: KAA0060853.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1000.7 bits (2586), Expect = 4.5e-288
Identity = 498/527 (94.50%), Postives = 498/527 (94.50%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK
Sbjct: 144 MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 203

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTR-------------- 120
           YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTR              
Sbjct: 204 YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTREANEEHLRIVLQTL 263

Query: 121 ---------------RVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI 180
                          RVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI
Sbjct: 264 RDKQLYAKFSKCEFWRVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI 323

Query: 181 LALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLAL 240
           LALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLAL
Sbjct: 324 LALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLAL 383

Query: 241 KIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVAD 300
           KIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVAD
Sbjct: 384 KIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVAD 443

Query: 301 ALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSED 360
           ALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSED
Sbjct: 444 ALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSED 503

Query: 361 SNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGST 420
           SNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGST
Sbjct: 504 SNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGST 563

Query: 421 KMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDI 480
           KMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDI
Sbjct: 564 KMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDI 623

Query: 481 LFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKI 499
           LFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKI
Sbjct: 624 LFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKI 670

[Close]

BLAST of Cmc11g0296291.1 vs. NCBI nr
Match: TYK01102.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 960.7 bits (2482), Expect = 5.2e-276
Identity = 487/550 (88.55%), Postives = 490/550 (89.09%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLF+KKKDGTLRLCIDYRQLNKVTICNK
Sbjct: 232 MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFMKKKDGTLRLCIDYRQLNKVTICNK 291

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTR-------------- 120
           YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTA RTR              
Sbjct: 292 YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTALRTREANEEHLRIVLQTL 351

Query: 121 --------------------------------------RVIEDFSRLALPLTALTRKNAK 180
                                                 RVIEDFSRLALPLTALTRKNAK
Sbjct: 352 RDKQLYAKFSKLEAVINWERPISATEVRSFLGLARYYGRVIEDFSRLALPLTALTRKNAK 411

Query: 181 FEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSR 240
           FEW DKCEQSFQELKKRLVTAPILALPVT KDYVIYCDASRLGLSCVLMQDGNVIAYSSR
Sbjct: 412 FEWLDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLSCVLMQDGNVIAYSSR 471

Query: 241 QLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQW 300
           QLKEHECNYPTHDLEL EVVLALKIWRHYLFGEKCHIFIDHKRLKYIF+QKELNLRQRQW
Sbjct: 472 QLKEHECNYPTHDLELAEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFDQKELNLRQRQW 531

Query: 301 LELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSG 360
           LELIKDYDCTIEYHPSKANVVADALSRKSRL KSALYGIRVALLNELRGSKAVVTTEDSG
Sbjct: 532 LELIKDYDCTIEYHPSKANVVADALSRKSRLPKSALYGIRVALLNELRGSKAVVTTEDSG 591

Query: 361 SLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNI 420
           SLLAQFQV SFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCV NI
Sbjct: 592 SLLAQFQVRSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVLNI 651

Query: 421 NELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQ 480
           +ELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQ
Sbjct: 652 SELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQ 711

Query: 481 RPEGFLNPLPVPKWKWEHITMDILFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLD 499
           RPEGFLNPLPVPKWKWEHITMDILFGLPRT SGHDGIWVIVDRLTKTTRFLPVKATSTLD
Sbjct: 712 RPEGFLNPLPVPKWKWEHITMDILFGLPRTSSGHDGIWVIVDRLTKTTRFLPVKATSTLD 771

[Close]

BLAST of Cmc11g0296291.1 vs. NCBI nr
Match: TYJ95925.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 916.4 bits (2367), Expect = 1.1e-262
Identity = 478/623 (76.73%), Postives = 488/623 (78.33%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQE VDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI NK
Sbjct: 219 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 278

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRT--------------- 120
           Y LPRIDD+FDQLRGAALFSKIDLRS YHQL VRESDIAKTAFRT               
Sbjct: 279 YRLPRIDDLFDQLRGAALFSKIDLRSEYHQLKVRESDIAKTAFRTWYGHYEFRVMPFDLT 338

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 339 NAPAVFMDLMNRIFHRYLDPFVIVFIDDILVYSVDRESHEEHLRIVLQTLLSAKGVSVDP 398

Query: 181 ----------------------------RRVIEDFSRLALPLTALTRKNAKFEWSDKCEQ 240
                                       RR IEDFS+LALPLTALTRKN KFEWSDKCEQ
Sbjct: 399 QKVEAIVNWERPISATEVRSFLGLAGYYRRFIEDFSQLALPLTALTRKNVKFEWSDKCEQ 458

Query: 241 SFQELKKRLVTAPILALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNY 300
           SFQELKKRLVTAPILALPVT KDYVIYCDASRLGL CVLMQDGNVIAY+SRQLKEHECNY
Sbjct: 459 SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNY 518

Query: 301 PTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDC 360
           PTHDLEL  VVLALKIWRHYLFGEKCHIF DHK LKYIF+QKELNLRQR+WLELIKDYDC
Sbjct: 519 PTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDC 578

Query: 361 TIEYHPSKANVVADALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVW 420
           TIEYHP KANVVADALSRKSRL KSAL GIRVALLNELRGSKAVVTTEDSGSLLAQFQV 
Sbjct: 579 TIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVR 638

Query: 421 SFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILE 480
           S LVTEIVR QSEDSNLQKK  KSKKGLEVEFELRTDG IV QGRLCVPNI+ELKNAILE
Sbjct: 639 SSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILE 698

Query: 481 EAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPL 521
           EAHSSAY MHPGSTKMYRTLKKTYWW GMKQEIAEYVDRCLICQQV+PVRQRP GFLNPL
Sbjct: 699 EAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPL 758

[Close]

BLAST of Cmc11g0296291.1 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 914.8 bits (2363), Expect = 3.3e-262
Identity = 481/648 (74.23%), Postives = 490/648 (75.62%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            MAPSELKELKMQLQE VDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI NK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRT--------------- 120
            YPLPRIDD+FDQLRGAALFSKIDLRSGYHQL VRESDIAKTAFRT               
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  -----------------------------------------------------RRVIEDF 240
                                                                 RR IEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVT KDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  SCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRL 360
             CVLMQDGNVIAY+SRQLKEHECNYPTHDLEL  VVLALKIWRHYLFGEKCHIF DHK L
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALL 420
            KYIF+QKELNLRQR+WLELIKDYDCTIEYHP KANVVADALSRKSRL KSAL GIRVALL
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

Query: 421  NELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELR 480
            NELRGSKAVVTTEDSGSLLAQFQV S LVTEIVR QSEDSNLQKK  KSKKGLEVEFELR
Sbjct: 1085 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1144

Query: 481  TDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAE 521
            TDG IV QGRLCVPNI+ELKNAILEEAHSSAY MHPGSTKMYRTLKKTYWW GMKQEIAE
Sbjct: 1145 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1204

[Close]

BLAST of Cmc11g0296291.1 vs. NCBI nr
Match: KAA0037582.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 914.8 bits (2363), Expect = 3.3e-262
Identity = 481/648 (74.23%), Postives = 490/648 (75.62%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQE VDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI NK
Sbjct: 249 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 308

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRT--------------- 120
           YPLPRIDD+FDQLRGAALFSKIDLRSGYHQL VRESDIAKTAFRT               
Sbjct: 309 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 368

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 369 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 428

Query: 181 -----------------------------------------------------RRVIEDF 240
                                                                RR IEDF
Sbjct: 429 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 488

Query: 241 SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
           SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVT KDYVIYCDASRLGL
Sbjct: 489 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 548

Query: 301 SCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRL 360
            CVLMQDGNVIAY+SRQLKEHECNYPTHDLEL  VVLALKIWRHYLFGEKCHIF DHK L
Sbjct: 549 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 608

Query: 361 KYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALL 420
           KYIF+QKELNLRQR+WLELIKDYDCTIEYHP KANVVADALSRKSRL KSAL GIRVALL
Sbjct: 609 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 668

Query: 421 NELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELR 480
           NELRGSKAVVTTEDSGSLLAQFQV S LVTEIVR QSEDSNLQKK  KSKKGLEVEFELR
Sbjct: 669 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 728

Query: 481 TDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAE 521
           TDG IV QGRLCVPNI+ELKNAILEEAHSSAY MHPGSTKMYRTLKKTYWW GMKQEIAE
Sbjct: 729 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 788

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-57
Identity = 157/656 (23.93%), Postives = 282/656 (42.99%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFR---------------- 120
            YPLP I+ +  +++G+ +F+K+DL+S YH + VR+ D  K AFR                
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 540  IAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  ----------------------------------------------------TRRVIEDF 240
                                                                 R+ I   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  SCVLMQDGN-----VIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFG--EKCHI 360
              VL Q  +      + Y S ++ + + NY   D E++ ++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FIDHKRL-KYIFNQKE-LNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSA 420
              DH+ L   I N+ E  N R  +W   ++D++  I Y P  AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------- 839

Query: 421  LYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKK 480
                   +++E        + ++S + + Q  +      ++V   + D+ L   L    K
Sbjct: 840  -------IVDETEPIPK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK 899

Query: 481  GLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWW 520
             +E   +L+   +I  + ++ +PN  +L   I+++ H    ++HPG   +   + + + W
Sbjct: 900  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-57
Identity = 157/656 (23.93%), Postives = 282/656 (42.99%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFR---------------- 120
            YPLP I+ +  +++G+ +F+K+DL+S YH + VR+ D  K AFR                
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  ----------------------------------------------------TRRVIEDF 240
                                                                 R+ I   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  SCVLMQDGN-----VIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFG--EKCHI 360
              VL Q  +      + Y S ++ + + NY   D E++ ++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FIDHKRL-KYIFNQKE-LNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSA 420
              DH+ L   I N+ E  N R  +W   ++D++  I Y P  AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------- 839

Query: 421  LYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKK 480
                   +++E        + ++S + + Q  +      ++V   + D+ L   L    K
Sbjct: 840  -------IVDETEPIPK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK 899

Query: 481  GLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWW 520
             +E   +L+   +I  + ++ +PN  +L   I+++ H    ++HPG   +   + + + W
Sbjct: 900  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-57
Identity = 157/656 (23.93%), Postives = 282/656 (42.99%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFR---------------- 120
            YPLP I+ +  +++G+ +F+K+DL+S YH + VR+ D  K AFR                
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  ----------------------------------------------------TRRVIEDF 240
                                                                 R+ I   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  SCVLMQDGN-----VIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFG--EKCHI 360
              VL Q  +      + Y S ++ + + NY   D E++ ++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FIDHKRL-KYIFNQKE-LNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSA 420
              DH+ L   I N+ E  N R  +W   ++D++  I Y P  AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------- 839

Query: 421  LYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKK 480
                   +++E        + ++S + + Q  +      ++V   + D+ L   L    K
Sbjct: 840  -------IVDETEPIPK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK 899

Query: 481  GLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWW 520
             +E   +L+   +I  + ++ +PN  +L   I+++ H    ++HPG   +   + + + W
Sbjct: 900  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-57
Identity = 157/656 (23.93%), Postives = 282/656 (42.99%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFR---------------- 120
            YPLP I+ +  +++G+ +F+K+DL+S YH + VR+ D  K AFR                
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  ----------------------------------------------------TRRVIEDF 240
                                                                 R+ I   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  SCVLMQDGN-----VIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFG--EKCHI 360
              VL Q  +      + Y S ++ + + NY   D E++ ++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FIDHKRL-KYIFNQKE-LNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSA 420
              DH+ L   I N+ E  N R  +W   ++D++  I Y P  AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------- 839

Query: 421  LYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKK 480
                   +++E        + ++S + + Q  +      ++V   + D+ L   L    K
Sbjct: 840  -------IVDETEPIPK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK 899

Query: 481  GLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWW 520
             +E   +L+   +I  + ++ +PN  +L   I+++ H    ++HPG   +   + + + W
Sbjct: 900  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.5e-57
Identity = 157/656 (23.93%), Postives = 282/656 (42.99%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFR---------------- 120
            YPLP I+ +  +++G+ +F+K+DL+S YH + VR+ D  K AFR                
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  ----------------------------------------------------TRRVIEDF 240
                                                                 R+ I   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  SCVLMQDGN-----VIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFG--EKCHI 360
              VL Q  +      + Y S ++ + + NY   D E++ ++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FIDHKRL-KYIFNQKE-LNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSA 420
              DH+ L   I N+ E  N R  +W   ++D++  I Y P  AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------- 839

Query: 421  LYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKK 480
                   +++E        + ++S + + Q  +      ++V   + D+ L   L    K
Sbjct: 840  -------IVDETEPIPK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK 899

Query: 481  GLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWW 520
             +E   +L+   +I  + ++ +PN  +L   I+++ H    ++HPG   +   + + + W
Sbjct: 900  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 959

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL
Match: A0A5A7UY11 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00880 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 2.2e-288
Identity = 498/527 (94.50%), Postives = 498/527 (94.50%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK
Sbjct: 144 MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 203

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTR-------------- 120
           YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTR              
Sbjct: 204 YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTREANEEHLRIVLQTL 263

Query: 121 ---------------RVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI 180
                          RVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI
Sbjct: 264 RDKQLYAKFSKCEFWRVIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI 323

Query: 181 LALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLAL 240
           LALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLAL
Sbjct: 324 LALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLAL 383

Query: 241 KIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVAD 300
           KIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVAD
Sbjct: 384 KIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVAD 443

Query: 301 ALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSED 360
           ALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSED
Sbjct: 444 ALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSED 503

Query: 361 SNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGST 420
           SNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGST
Sbjct: 504 SNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGST 563

Query: 421 KMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDI 480
           KMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDI
Sbjct: 564 KMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPLPVPKWKWEHITMDI 623

Query: 481 LFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKI 499
           LFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKI
Sbjct: 624 LFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLDQLARLYVDKI 670

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL
Match: A0A5D3BQQ4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001290 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 2.5e-276
Identity = 487/550 (88.55%), Postives = 490/550 (89.09%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLF+KKKDGTLRLCIDYRQLNKVTICNK
Sbjct: 232 MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFMKKKDGTLRLCIDYRQLNKVTICNK 291

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRTR-------------- 120
           YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTA RTR              
Sbjct: 292 YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTALRTREANEEHLRIVLQTL 351

Query: 121 --------------------------------------RVIEDFSRLALPLTALTRKNAK 180
                                                 RVIEDFSRLALPLTALTRKNAK
Sbjct: 352 RDKQLYAKFSKLEAVINWERPISATEVRSFLGLARYYGRVIEDFSRLALPLTALTRKNAK 411

Query: 181 FEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSR 240
           FEW DKCEQSFQELKKRLVTAPILALPVT KDYVIYCDASRLGLSCVLMQDGNVIAYSSR
Sbjct: 412 FEWLDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLSCVLMQDGNVIAYSSR 471

Query: 241 QLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQW 300
           QLKEHECNYPTHDLEL EVVLALKIWRHYLFGEKCHIFIDHKRLKYIF+QKELNLRQRQW
Sbjct: 472 QLKEHECNYPTHDLELAEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFDQKELNLRQRQW 531

Query: 301 LELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSG 360
           LELIKDYDCTIEYHPSKANVVADALSRKSRL KSALYGIRVALLNELRGSKAVVTTEDSG
Sbjct: 532 LELIKDYDCTIEYHPSKANVVADALSRKSRLPKSALYGIRVALLNELRGSKAVVTTEDSG 591

Query: 361 SLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNI 420
           SLLAQFQV SFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCV NI
Sbjct: 592 SLLAQFQVRSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVLNI 651

Query: 421 NELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQ 480
           +ELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQ
Sbjct: 652 SELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQ 711

Query: 481 RPEGFLNPLPVPKWKWEHITMDILFGLPRTFSGHDGIWVIVDRLTKTTRFLPVKATSTLD 499
           RPEGFLNPLPVPKWKWEHITMDILFGLPRT SGHDGIWVIVDRLTKTTRFLPVKATSTLD
Sbjct: 712 RPEGFLNPLPVPKWKWEHITMDILFGLPRTSSGHDGIWVIVDRLTKTTRFLPVKATSTLD 771

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL
Match: A0A5D3BBS5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002370 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 5.4e-263
Identity = 478/623 (76.73%), Postives = 488/623 (78.33%), Query Frame = 0


Query: 1   MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
           MAPSELKELKMQLQE VDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI NK
Sbjct: 219 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 278

Query: 61  YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRT--------------- 120
           Y LPRIDD+FDQLRGAALFSKIDLRS YHQL VRESDIAKTAFRT               
Sbjct: 279 YRLPRIDDLFDQLRGAALFSKIDLRSEYHQLKVRESDIAKTAFRTWYGHYEFRVMPFDLT 338

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 339 NAPAVFMDLMNRIFHRYLDPFVIVFIDDILVYSVDRESHEEHLRIVLQTLLSAKGVSVDP 398

Query: 181 ----------------------------RRVIEDFSRLALPLTALTRKNAKFEWSDKCEQ 240
                                       RR IEDFS+LALPLTALTRKN KFEWSDKCEQ
Sbjct: 399 QKVEAIVNWERPISATEVRSFLGLAGYYRRFIEDFSQLALPLTALTRKNVKFEWSDKCEQ 458

Query: 241 SFQELKKRLVTAPILALPVTWKDYVIYCDASRLGLSCVLMQDGNVIAYSSRQLKEHECNY 300
           SFQELKKRLVTAPILALPVT KDYVIYCDASRLGL CVLMQDGNVIAY+SRQLKEHECNY
Sbjct: 459 SFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNY 518

Query: 301 PTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRLKYIFNQKELNLRQRQWLELIKDYDC 360
           PTHDLEL  VVLALKIWRHYLFGEKCHIF DHK LKYIF+QKELNLRQR+WLELIKDYDC
Sbjct: 519 PTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDC 578

Query: 361 TIEYHPSKANVVADALSRKSRLLKSALYGIRVALLNELRGSKAVVTTEDSGSLLAQFQVW 420
           TIEYHP KANVVADALSRKSRL KSAL GIRVALLNELRGSKAVVTTEDSGSLLAQFQV 
Sbjct: 579 TIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVR 638

Query: 421 SFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELRTDGVIVIQGRLCVPNINELKNAILE 480
           S LVTEIVR QSEDSNLQKK  KSKKGLEVEFELRTDG IV QGRLCVPNI+ELKNAILE
Sbjct: 639 SSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILE 698

Query: 481 EAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAEYVDRCLICQQVQPVRQRPEGFLNPL 521
           EAHSSAY MHPGSTKMYRTLKKTYWW GMKQEIAEYVDRCLICQQV+PVRQRP GFLNPL
Sbjct: 699 EAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPL 758

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.6e-262
Identity = 481/648 (74.23%), Postives = 490/648 (75.62%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            MAPSELKELKMQLQE VDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI NK
Sbjct: 627  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRT--------------- 120
            YPLPRIDD+FDQLRGAALFSKIDLRSGYHQL VRESDIAKTAFRT               
Sbjct: 687  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 747  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181  -----------------------------------------------------RRVIEDF 240
                                                                 RR IEDF
Sbjct: 807  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVT KDYVIYCDASRLGL
Sbjct: 867  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301  SCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRL 360
             CVLMQDGNVIAY+SRQLKEHECNYPTHDLEL  VVLALKIWRHYLFGEKCHIF DHK L
Sbjct: 927  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 986

Query: 361  KYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALL 420
            KYIF+QKELNLRQR+WLELIKDYDCTIEYHP KANVVADALSRKSRL KSAL GIRVALL
Sbjct: 987  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1046

Query: 421  NELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELR 480
            NELRGSKAVVTTEDSGSLLAQFQV S LVTEIVR QSEDSNLQKK  KSKKGLEVEFELR
Sbjct: 1047 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1106

Query: 481  TDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAE 521
            TDG IV QGRLCVPNI+ELKNAILEEAHSSAY MHPGSTKMYRTLKKTYWW GMKQEIAE
Sbjct: 1107 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1166

[Close]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.6e-262
Identity = 481/648 (74.23%), Postives = 490/648 (75.62%), Query Frame = 0


Query: 1    MAPSELKELKMQLQEHVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTICNK 60
            MAPSELKELKMQLQE VDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI NK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDIFDQLRGAALFSKIDLRSGYHQLNVRESDIAKTAFRT--------------- 120
            YPLPRIDD+FDQLRGAALFSKIDLRSGYHQL VRESDIAKTAFRT               
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  -----------------------------------------------------RRVIEDF 240
                                                                 RR IEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTWKDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVT KDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  SCVLMQDGNVIAYSSRQLKEHECNYPTHDLELVEVVLALKIWRHYLFGEKCHIFIDHKRL 360
             CVLMQDGNVIAY+SRQLKEHECNYPTHDLEL  VVLALKIWRHYLFGEKCHIF DHK L
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFNQKELNLRQRQWLELIKDYDCTIEYHPSKANVVADALSRKSRLLKSALYGIRVALL 420
            KYIF+QKELNLRQR+WLELIKDYDCTIEYHP KANVVADALSRKSRL KSAL GIRVALL
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

Query: 421  NELRGSKAVVTTEDSGSLLAQFQVWSFLVTEIVRSQSEDSNLQKKLGKSKKGLEVEFELR 480
            NELRGSKAVVTTEDSGSLLAQFQV S LVTEIVR QSEDSNLQKK  KSKKGLEVEFELR
Sbjct: 1085 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1144

Query: 481  TDGVIVIQGRLCVPNINELKNAILEEAHSSAYVMHPGSTKMYRTLKKTYWWPGMKQEIAE 521
            TDG IV QGRLCVPNI+ELKNAILEEAHSSAY MHPGSTKMYRTLKKTYWW GMKQEIAE
Sbjct: 1145 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1204

The following BLAST results are available for this feature:

BLAST of Cmc11g0296291.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060853.1	4.5e-288	94.50	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK01102.1	5.2e-276	88.55	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYJ95925.1	1.1e-262	76.73	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	3.3e-262	74.23	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
KAA0037582.1	3.3e-262	74.23	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0296291.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.5e-57	23.93	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.5e-57	23.93	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.5e-57	23.93	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.5e-57	23.93	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.5e-57	23.93	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY11	2.2e-288	94.50	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BQQ4	2.5e-276	88.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5D3BBS5	5.4e-263	76.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7U2V7	1.6e-262	74.23	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	1.6e-262	74.23	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc11g0296291.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 131..225 e-value: 2.3E-27 score: 94.9
None	No IPR available	GENE3D	1.10.340.70		coord: 333..424 e-value: 6.7E-19 score: 69.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..109 e-value: 1.7E-43 score: 150.4
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 105..425
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 105..425
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 162..276 e-value: 4.54447E-48 score: 160.351
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..115 e-value: 2.55906E-41 score: 144.66
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 370..425 e-value: 3.8E-19 score: 68.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 435..520 e-value: 4.8E-12 score: 47.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..88 e-value: 1.7E-43 score: 150.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..111 e-value: 2.9E-7 score: 30.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..261
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 435..519

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0296291	Cmc11g0296291	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296291.1-exon	Cmc11g0296291.1-exon-CMiso1.1chr11:14412739..14413984	exon
Cmc11g0296291.1-exon	Cmc11g0296291.1-exon-CMiso1.1chr11:14414369..14414685	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296291.1-cds	Cmc11g0296291.1-cds-CMiso1.1chr11:14412739..14413984	CDS
Cmc11g0296291.1-cds	Cmc11g0296291.1-cds-CMiso1.1chr11:14414369..14414685	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296291.1	Cmc11g0296291.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding