Cmc11g0296141.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0296141.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RPM1-interacting protein 4-like
Location	CMiso1.1chr11: 14142358 .. 14145028 (+)
Sequence length	990
RNA-Seq Expression	Cmc11g0296141.1
Synteny	Cmc11g0296141.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCTTTCAACGTCTGGGGGTTGGCGCTTGGGGTATGCACAGCTGGAAGTAGCAGACACCGTTAAACGTCCTTCGAAGCTGCGTAGACGAAAGGCCCCACTCTCCACTTCTATAACATCCCATTACCCAAATTCCTTCTTCTTCCTTCCTTCTCTCTCAATCAATCATACACCCAAATCAACACATCTTCTTCTTTTTCTTCCTCTCAACCCTCACTCATGGCGGTATGTAATCCTTCTTTCTTTCATCTCTAATCTCTCTTTACTTATCCCTGATTTTGACTTCCTCACTTATTCCTTTCTGGGTTTCTCTTCATCTTTTTTTATTTTTATTTTTATTTTTTTTTATTTTTTATTTTTCCCTTTCTATTTTCCTCTTCCTCTCTAATGGGCATTCTTAAATTGAGGGTTTGCTGGGTCTGCTTTCTATTTGGTCTTCATATGAATCCGGTTGTGTTCTGTTCCTATGTTTGGTACTATGCTTGATTGCTTTTCCCCTTTGTGTTCACACCCCTCACTTTCTTTGTTATTCGATGATTTGTTTACTTGCTTTTAGCCTTTTCTCTATCGTTTTGTTAGTTTGCTAATTTTGCTGAGGGATTGGTGGGGTTTCTTTCTGTTTGTTTGGTTTTGAAGTCCCTTCCATTGCGGAAATTTGGGCTTTTCACTCAATCAGCTTGTCCGTAAGTATGCTGAATAAAAAGTTGGGGAGTTCTTTGGCATTCTATGTTAAATATGTGTAAATTTTATCTAACTTTAGAGTTTCGTCCAAACGAACAGACAAACTAGATAGCCCAACGTATATCTTATAATTTGGTGTTATAGATGAGCTCTGGGAGTTCTATTTTTTTTTTCCTACAGCTATTTTTAGTCTGAGTAAAGACATAAGGATGACCAAGAAACTTGGAAAAGTCTCATGTACTATTCTATGGAGTGCGTTGTGAGATTTCTCTATGAATGTTGAATCTGAAGCTTTCATTTTCTCCCCTGTTCTTCACCATTCTATTCATAAGTTTTATGAGATATCTCTGATACTTGATTGGGTAGTTCTTGATTGTTTCGAGATTGTCTCACTTTGGGGTTGGGTCTTCATATCATGGGGTTTGGTAGCAAGTGTTGGTTAATTTAGGAATGCACTTTTGTTCAAAACCTTGAATGACAGTTGAAGATTTTTCTTTATGTCTGTTTTTGTTTTGAATCAGACAGGATTTTTTGAATTGTATCTATGGTCTTATATAGGTTTCTTATGCTTTCTCTTTTTCTCTCCCTTGCGTAGTTTGTATTTTTTGAGCATTAGACTTGGTTAATAAATAAACTATGGTCTTACATGGGCAAGGTTTTAGAGATTTGAACCAAGAAGAAGGGAGAAGAGATGAAAGAAGTATACTTGTGCTCTCCACCTTCATATCTTTGTTACTTATTTTACTAAGTTTTTTGCTTCCCTTGGCCTCAACCTTTAAGCTACAAACTTAAAGAGCTATGACTAAGTGTACATTTATACTATGTTGCCATGAAATGACTGCCATCCTTGAGTTTATTGATTCTGCAGGAAAAAGGCAGTAGCAGTCCATTGCCAAAGTTCGGTGAATGGGATGTCAATGATCCAGCATCCGCCGAGGGATTCACAGTAATCTTTAATAAAGCCAGAAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCGAAGGATGAAACAGCATTCAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTGTAAGTTCTTTGTAGCCAAAGGCTTTTAATTTATTTGATTAGTTTTGCGATTGCTTGGAATTGGAAGCTTTGCTTGTTAGACTATTGGCGAGTGTATCTTTTTGGATACCTCCTCTTGAGCTTCTAACCCACATTCATGCAGCCATTGGATAGAGCCACATGGTGAAATCGATTTAAATGATCACCTCTTTGTTGGGTGCCTAAACCTTTTGCATTTTCTTTCTATTTCACGAATTCATGATGGAGGCATTGTTAAATATACCATATTGTTTAAACTAATTCCATTCATATATATTATATTACACGAGTAGTAGAACACTGCTATTTTCTCATGATTTTGAAAGTTGGAAATTGCAGAAAAAATGGTTTTGCTGCTTGCAAGCTGCGGAATCGTGAAGGTTTTGGGTTCGATAAAGGGGGTTCAGCAGAATTGTATAATCTGAAAATTCTGAACAACACGAGTGAAGCTGTATTTAAAACCTGTGATGGATAACGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTCTGGTTGGGGATGAGGATGATTAAATCTAATCTATCATTGTCTTGTTATGTTGTTCATTCTGCATAAATGACAATTGTTGAAGATTGTTGTATTCATCATCATCCCTCCTCCCCGCTACTTGTGAAATGATGTTGTTTGTCGACACTTTCTTGTATGAATGATTTCAAATGTCTATCTTTTCTATGTAGTCTCAAATTTTATGCAAAGGGTTGTTTCATATCCCCTTCACACACCTTCCATTTCAATTCATGTGTGGTCGGTTATTGAAAACTAGACGATGTTGAACTATTTGTTTTGGTTTTTCAGAACAATTAGGTTTTTTTCTTTAAAGAACTTGAACGACAATGCTGGTTCATTAGCATTCTAATTTGTTTTATAGCTTTTATTATATTTATT

mRNA sequence

TGTCTTTCAACGTCTGGGGGTTGGCGCTTGGGGTATGCACAGCTGGAAGTAGCAGACACCGTTAAACGTCCTTCGAAGCTGCGTAGACGAAAGGCCCCACTCTCCACTTCTATAACATCCCATTACCCAAATTCCTTCTTCTTCCTTCCTTCTCTCTCAATCAATCATACACCCAAATCAACACATCTTCTTCTTTTTCTTCCTCTCAACCCTCACTCATGGCGGAAAAAGGCAGTAGCAGTCCATTGCCAAAGTTCGGTGAATGGGATGTCAATGATCCAGCATCCGCCGAGGGATTCACAGTAATCTTTAATAAAGCCAGAAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCGAAGGATGAAACAGCATTCAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTAAAAAATGGTTTTGCTGCTTGCAAGCTGCGGAATCGTGAAGGTTTTGGGTTCGATAAAGGGGGTTCAGCAGAATTGTATAATCTGAAAATTCTGAACAACACGAGTGAAGCTGTATTTAAAACCTGTGATGGATAACGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTCTGGTTGGGGATGAGGATGATTAAATCTAATCTATCATTGTCTTGTTATGTTGTTCATTCTGCATAAATGACAATTGTTGAAGATTGTTGTATTCATCATCATCCCTCCTCCCCGCTACTTGTGAAATGATGTTGTTTGTCGACACTTTCTTGTATGAATGATTTCAAATGTCTATCTTTTCTATGTAGTCTCAAATTTTATGCAAAGGGTTGTTTCATATCCCCTTCACACACCTTCCATTTCAATTCATGTGTGGTCGGTTATTGAAAACTAGACGATGTTGAACTATTTGTTTTGGTTTTTCAGAACAATTAGGTTTTTTTCTTTAAAGAACTTGAACGACAATGCTGGTTCATTAGCATTCTAATTTGTTTTATAGCTTTTATTATATTTATT

Coding sequence (CDS)

ATGGCGGAAAAAGGCAGTAGCAGTCCATTGCCAAAGTTCGGTGAATGGGATGTCAATGATCCAGCATCCGCCGAGGGATTCACAGTAATCTTTAATAAAGCCAGAAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCGAAGGATGAAACAGCATTCAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTAAAAAATGGTTTTGCTGCTTGCAAGCTGCGGAATCGTGA

Protein sequence

MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGKSQPKKWFCCLQAAES

Homology

[Close]

BLAST of Cmc11g0296141.1 vs. NCBI nr
Match: XP_008464154.1 (PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo] >XP_011656890.1 protein NOI4 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 6.3e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60

Query: 61 GKSQPKKWFCCLQAAES 78
          GKSQPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]

BLAST of Cmc11g0296141.1 vs. NCBI nr
Match: KAA0060827.1 (RPM1-interacting protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 9.1e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 3   EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 62
           EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK
Sbjct: 52  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 111

Query: 63  SQPKKWFCCLQAAES 78
           SQPKKWFCCLQAAES
Sbjct: 112 SQPKKWFCCLQAAES 126

[Close]

BLAST of Cmc11g0296141.1 vs. NCBI nr
Match: XP_008464153.1 (PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo] >TYK08810.1 RPM1-interacting protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 9.1e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 62
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK
Sbjct: 4  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 63

Query: 63 SQPKKWFCCLQAAES 78
          SQPKKWFCCLQAAES
Sbjct: 64 SQPKKWFCCLQAAES 78

[Close]

BLAST of Cmc11g0296141.1 vs. NCBI nr
Match: XP_038902743.1 (protein NOI4 [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 4.5e-35
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKD+  +KNGSVL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVL 60

Query: 61 GKSQPKKWFCCLQAAES 78
          GKSQPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]

BLAST of Cmc11g0296141.1 vs. NCBI nr
Match: XP_022947539.1 (uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata] >XP_022971144.1 uncharacterized protein LOC111469905 isoform X1 [Cucurbita maxima] >XP_023534543.1 uncharacterized protein LOC111796087 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6604921.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.7 bits (387), Expect = 6.5e-34
Identity = 70/77 (90.91%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKD+ ++K+G+VL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVL 60

Query: 61 GKSQPKKWFCCLQAAES 78
          GKSQPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-21
Identity = 51/76 (67.11%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAF--KNGS 60
          M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K         G 
Sbjct: 1  MSDKG--RPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGG 60

Query: 61 VLGKSQPKKWFCCLQA 75
             K QPKKW CC+QA
Sbjct: 61 DPSKPQPKKWLCCMQA 74

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 10  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDET 53
           +PKFG+WD N+P+SA+G+T IFNK R E+ +G      ++  T
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPT 190

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy TrEMBL
Match: A0A0A0KCQ1 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G113510 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60

Query: 61 GKSQPKKWFCCLQAAES 78
          GKSQPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy TrEMBL
Match: A0A1S3CKU3 (RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502102 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60

Query: 61 GKSQPKKWFCCLQAAES 78
          GKSQPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy TrEMBL
Match: A0A5D3CBU4 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00150 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 62
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK
Sbjct: 4  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 63

Query: 63 SQPKKWFCCLQAAES 78
          SQPKKWFCCLQAAES
Sbjct: 64 SQPKKWFCCLQAAES 78

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy TrEMBL
Match: A0A5A7V1V9 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00530 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 3   EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 62
           EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK
Sbjct: 52  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 111

Query: 63  SQPKKWFCCLQAAES 78
           SQPKKWFCCLQAAES
Sbjct: 112 SQPKKWFCCLQAAES 126

[Close]

BLAST of Cmc11g0296141.1 vs. ExPASy TrEMBL
Match: A0A1S3CKV9 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502102 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 62
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK
Sbjct: 4  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 63

Query: 63 SQPKKWFCCLQAAES 78
          SQPKKWFCCLQAAES
Sbjct: 64 SQPKKWFCCLQAAES 78

[Close]

BLAST of Cmc11g0296141.1 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 55/75 (73.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAF-KNGSV 60
          MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KDE  + KNG V
Sbjct: 1  MADKG--RPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEV 60

Query: 61 LGKSQPKKWFCCLQA 75
          L K   KKWFCC++A
Sbjct: 61 LEK-PAKKWFCCIRA 72

[Close]

BLAST of Cmc11g0296141.1 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-22
Identity = 48/68 (70.59%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 9  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAF--KNGSVLGKSQPK 68
          PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K         G    K QPK
Sbjct: 23 PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPK 82

Query: 69 KWFCCLQA 75
          KW CC+QA
Sbjct: 83 KWLCCMQA 90

[Close]

BLAST of Cmc11g0296141.1 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-18
Identity = 48/79 (60.76%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAF--KNGS 60
          M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K         G 
Sbjct: 1  MSDKG--RPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGG 60

Query: 61 VLGKSQPKKWFCCLQAAES 78
             K QP K    L A+ S
Sbjct: 61 DPSKPQPVKKMALLHASSS 77

[Close]

BLAST of Cmc11g0296141.1 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 87.4 bits (215), Expect = 5.4e-18
Identity = 45/71 (63.38%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 9  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAF--KNGSVLGKSQPK 68
          PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K         G    K QP 
Sbjct: 23 PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPV 82

Query: 69 KWFCCLQAAES 78
          K    L A+ S
Sbjct: 83 KKMALLHASSS 93

[Close]

BLAST of Cmc11g0296141.1 vs. TAIR 10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 70.5 bits (171), Expect = 6.8e-13
Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60
          MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +KKTG    S +K  +  K     
Sbjct: 1  MASNSDARPLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTG---RSSSKAPSQRKQD--- 60

Query: 61 GKSQPKKWFC 71
          G    KKW C
Sbjct: 61 GVKPTKKWLC 64

The following BLAST results are available for this feature:

BLAST of Cmc11g0296141.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464154.1	6.3e-37	100.00	PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo] >XP_011656890.1 ...	[more]
KAA0060827.1	9.1e-36	100.00	RPM1-interacting protein 4 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008464153.1	9.1e-36	100.00	PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo] >TYK08810.1 RPM1...	[more]
XP_038902743.1	4.5e-35	94.81	protein NOI4 [Benincasa hispida]	[more]
XP_022947539.1	6.5e-34	90.91	uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata] >XP_0229711...	[more]

BLAST of Cmc11g0296141.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	1.0e-21	67.11	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	1.0e-05	46.51	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Cmc11g0296141.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCQ1	3.1e-37	100.00	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G11...	[more]
A0A1S3CKU3	3.1e-37	100.00	RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502102 PE...	[more]
A0A5D3CBU4	4.4e-36	100.00	RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7V1V9	4.4e-36	100.00	RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CKV9	4.4e-36	100.00	RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502102 PE...	[more]

BLAST of Cmc11g0296141.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04410.1	1.7e-24	73.33	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	2.7e-22	70.59	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	1.4e-18	60.76	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	5.4e-18	63.38	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	6.8e-13	54.29	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 7..40 e-value: 7.7E-22 score: 76.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..58
None	No IPR available	PANTHER	PTHR33159:SF64	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 1..75
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 1..75

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0296141	Cmc11g0296141	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296141.1-exon	Cmc11g0296141.1-exon-CMiso1.1chr11:14142358..14142581	exon
Cmc11g0296141.1-exon	Cmc11g0296141.1-exon-CMiso1.1chr11:14143906..14144094	exon
Cmc11g0296141.1-exon	Cmc11g0296141.1-exon-CMiso1.1chr11:14144452..14145028	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296141.1-five_prime_utr	Cmc11g0296141.1-five_prime_utr-CMiso1.1chr11:14142358..14142575	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296141.1-cds	Cmc11g0296141.1-cds-CMiso1.1chr11:14142576..14142581	CDS
Cmc11g0296141.1-cds	Cmc11g0296141.1-cds-CMiso1.1chr11:14143906..14144094	CDS
Cmc11g0296141.1-cds	Cmc11g0296141.1-cds-CMiso1.1chr11:14144452..14144490	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296141.1-three_prime_utr	Cmc11g0296141.1-three_prime_utr-CMiso1.1chr11:14144491..14145028	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0296141.1	Cmc11g0296141.1-protein	polypeptide