Cmc11g0295651.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295651.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 13235614 .. 13236513 (-)
Sequence length	900
RNA-Seq Expression	Cmc11g0295651.1
Synteny	Cmc11g0295651.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGTCACATTTTATGATTATGAAATATGGAAAATGGATGCCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCAAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCTATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTAATGAACCTTGTGTATATAAGAAAATCAACAAAGAAAAAGTAGTTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGAAATTATGTGGGATACCTTACTGATGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTCGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCAATAAAATGTTGGTTCAGTATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTTCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCTAACCCAGGGTTAGACCACTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGAAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACCTGATTTCCAAACCGATAAGGATTCTAAAAAATCTACGTCGGGATCAGTGTTCACCCTAA

mRNA sequence

ATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGTCACATTTTATGATTATGAAATATGGAAAATGGATGCCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCAAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCTATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTAATGAACCTTGTGTATATAAGAAAATCAACAAAGAAAAAGTAGTTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGAAATTATGTGGGATACCTTACTGATGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTCGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCAATAAAATGTTGGTTCAGTATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTTCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCTAACCCAGGGTTAGACCACTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGAAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACCTGATTTCCAAACCGATAAGGATTCTAAAAAATCTACGTCGGGATCAGTGTTCACCCTAA

Coding sequence (CDS)

ATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGTCACATTTTATGATTATGAAATATGGAAAATGGATGCCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCAAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCTATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTAATGAACCTTGTGTATATAAGAAAATCAACAAAGAAAAAGTAGTTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGAAATTATGTGGGATACCTTACTGATGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTCGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCAATAAAATGTTGGTTCAGTATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTTCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCTAACCCAGGGTTAGACCACTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGAAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACCTGATTTCCAAACCGATAAGGATTCTAAAAAATCTACGTCGGGATCAGTGTTCACCCTAA

Protein sequence

MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLSIYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVGYLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKKGLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDLISKPIRILKNLRRDQCSP

Homology

[Close]

BLAST of Cmc11g0295651.1 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.7 bits (1345), Expect = 2.1e-144
Identity = 261/280 (93.21%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1    MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
            MLKSIRILLSI TFYDYEIW+MD KTAFLN NLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 802  MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN VG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
            YLTDVKAWLAAQFQMKDLGEAQYVL IQIIRDRKNKTLALSQATYI+K+LV+YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
            GLLPFRHGVHLSKEQ  KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
            SNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTD
Sbjct: 1042 SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTD 1081

[Close]

BLAST of Cmc11g0295651.1 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.7 bits (1345), Expect = 2.1e-144
Identity = 261/280 (93.21%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
           MLKSIRILLSI TFYDYEIW+MD KTAFLN NLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 676 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 735

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN VG
Sbjct: 736 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 795

Query: 121 YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
           YLTDVKAWLAAQFQMKDLGEAQYVL IQIIRDRKNKTLALSQATYI+K+LV+YSMQNSKK
Sbjct: 796 YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 855

Query: 181 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
           GLLPFRHGVHLSKEQ  KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 856 GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 915

Query: 241 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
           SNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTD
Sbjct: 916 SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTD 955

[Close]

BLAST of Cmc11g0295651.1 vs. NCBI nr
Match: KAA0059556.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK29968.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 259/280 (92.50%), Postives = 267/280 (95.36%), Query Frame = 0


Query: 1   MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
           MLKSIRILLSI TFYDYEIW+MD KTAFLNDNLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 144 MLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRS 203

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
           IYGLKQASRSWNIRFDTAIK YGFDQNV+EPCVYKKINK KV FLVLY+DDILLIGN VG
Sbjct: 204 IYGLKQASRSWNIRFDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIGNDVG 263

Query: 121 YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
           YLTDVKAWLAAQFQMKD+GEAQYVL IQIIRDRKNKTLALSQATYI+KMLV+YSMQNSKK
Sbjct: 264 YLTDVKAWLAAQFQMKDVGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK 323

Query: 181 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
           GLLPFRHGVHLSKEQC KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 324 GLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 383

Query: 241 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
           SNP LDHWTAVKIILKYL+RTRDYMLVYGAKDLIL GYTD
Sbjct: 384 SNPELDHWTAVKIILKYLKRTRDYMLVYGAKDLILIGYTD 423

[Close]

BLAST of Cmc11g0295651.1 vs. NCBI nr
Match: KAA0050437.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 6.7e-143
Identity = 259/280 (92.50%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 1   MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
           ML+SIRILLSI TFYDYEIWKMD KTA LN NLEESIFMSQ EGFIT+GQEQKVCKLN S
Sbjct: 488 MLRSIRILLSIATFYDYEIWKMDVKTALLNGNLEESIFMSQREGFITQGQEQKVCKLNRS 547

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
           IYGLKQASRSWNIRFDTAIK YGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN +G
Sbjct: 548 IYGLKQASRSWNIRFDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDMG 607

Query: 121 YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
           YLTDVKAWLAAQFQMKDLGEAQYVL IQIIRDRKNK LALSQ TYI+KMLV+YSMQNSKK
Sbjct: 608 YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKILALSQVTYIDKMLVRYSMQNSKK 667

Query: 181 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
           GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVML TRP+ICYAVGIVSRYQ
Sbjct: 668 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLCTRPEICYAVGIVSRYQ 727

Query: 241 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
           SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD
Sbjct: 728 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 767

[Close]

BLAST of Cmc11g0295651.1 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 517.3 bits (1331), Expect = 8.7e-143
Identity = 259/280 (92.50%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 1    MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
            MLKSIRILLSI  FYDYEIW+MD KTAFLN NLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 802  MLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN VG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
            YLTDVKAWLAAQFQMKDLGE QYVL IQIIRDRKNKTLALSQATYI+K+LV+YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
            GLLPFRHGVHLSKEQ  KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
            SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT+
Sbjct: 1042 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTN 1081

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.3e-71
Identity = 133/280 (47.50%), Postives = 192/280 (68.57%), Query Frame = 0


Query: 2    LKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLSI 61
            + SIR +LS+    D E+ ++D KTAFL+ +LEE I+M QPEGF   G++  VCKLN S+
Sbjct: 901  MTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSL 960

Query: 62   YGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVY-KKINKEKVVFLVLYVDDILLIGNYVG 121
            YGLKQA R W ++FD+ +KS  + +  ++PCVY K+ ++   + L+LYVDD+L++G   G
Sbjct: 961  YGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKG 1020

Query: 122  YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 181
             +  +K  L+  F MKDLG AQ +L ++I+R+R ++ L LSQ  YI ++L +++M+N+K 
Sbjct: 1021 LIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKP 1080

Query: 182  GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 241
               P    + LSK+ C  T +E  +M ++PY+SAVGSLMY M+ TRPDI +AVG+VSR+ 
Sbjct: 1081 VSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL 1140

Query: 242  SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
             NPG +HW AVK IL+YLR T    L +G  D IL GYTD
Sbjct: 1141 ENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTD 1180

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 162.5 bits (410), Expect = 7.2e-39
Identity = 99/288 (34.38%), Postives = 160/288 (55.56%), Query Frame = 0


Query: 2    LKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLSI 61
            + S R +LS+V  Y+ ++ +MD KTAFLN  L+E I+M  P+G         VCKLN +I
Sbjct: 981  ISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAI 1040

Query: 62   YGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVY--KKINKEKVVFLVLYVDDILLIGNYV 121
            YGLKQA+R W   F+ A+K   F  +  + C+Y   K N  + ++++LYVDD+++    +
Sbjct: 1041 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDM 1100

Query: 122  GYLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSK 181
              + + K +L  +F+M DL E ++ + I+I  + +   + LSQ+ Y+ K+L +++M+N  
Sbjct: 1101 TRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCN 1160

Query: 182  KGLLPFRHGVHL----SKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGI 241
                P    ++     S E C+            P  S +G LMY+ML TRPD+  AV I
Sbjct: 1161 AVSTPLPSKINYELLNSDEDCN-----------TPCRSLIGCLMYIMLCTRPDLTTAVNI 1220

Query: 242  VSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYG---AKDLILTGYTD 281
            +SRY S    + W  +K +L+YL+ T D  L++    A +  + GY D
Sbjct: 1221 LSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVD 1253

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.4e-36
Identity = 92/278 (33.09%), Postives = 146/278 (52.52%), Query Frame = 0


Query: 4    SIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLSIYG 63
            SIRI+L +     + I ++D   AFL   L + ++MSQP GF+ K +   VC+L  +IYG
Sbjct: 1029 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYG 1088

Query: 64   LKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVGYLT 123
            LKQA R+W +   T + + GF  ++++  ++       ++++++YVDDIL+ GN    L 
Sbjct: 1089 LKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1148

Query: 124  DVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKKGLL 183
                 L+ +F +K+  +  Y L I+    R  + L LSQ  Y   +L + +M  +K    
Sbjct: 1149 HTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVAT 1208

Query: 184  PFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQSNP 243
            P      L+    +K P   E      Y   VGSL Y + +TRPD+ YAV  +S+Y   P
Sbjct: 1209 PMATSPKLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMP 1268

Query: 244  GLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTD 281
              DHW A+K +L+YL  T D+ + +     L L  Y+D
Sbjct: 1269 TDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSD 1297

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 95/278 (34.17%), Postives = 145/278 (52.16%), Query Frame = 0


Query: 4    SIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLSIYG 63
            SIRI+L +     + I ++D   AFL   L + ++MSQP GFI K +   VCKL  ++YG
Sbjct: 1046 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYG 1105

Query: 64   LKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVGYLT 123
            LKQA R+W +     + + GF  +V++  ++     + +V++++YVDDIL+ GN    L 
Sbjct: 1106 LKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLH 1165

Query: 124  DVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKKGLL 183
            +    L+ +F +KD  E  Y L I+    R    L LSQ  YI  +L + +M  +K    
Sbjct: 1166 NTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTT 1225

Query: 184  PFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQSNP 243
            P      LS    +K     E      Y   VGSL Y + +TRPDI YAV  +S++   P
Sbjct: 1226 PMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMP 1285

Query: 244  GLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTD 281
              +H  A+K IL+YL  T ++ + +     L L  Y+D
Sbjct: 1286 TEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1314

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 83/260 (31.92%), Postives = 123/260 (47.31%), Query Frame = 0


Query: 22  MDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLSIYGLKQASRSWNIRFDTAIKS 81
           MD  TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 82  YGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVGYLTDVKAWLAAQFQMKDLGEA 141
            GF ++  E  +Y +   +  +++ +YVDD+L+          VK  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 142 QYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKKGLLPFRHGVHLSKEQCSKTPQ 201
              L +  I    N  + LS   YI K   +  +   K    P  +    SK     T  
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCN----SKPLFETTSP 180

Query: 202 EVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRT 261
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 262 RDYMLVY-GAKDLILTGYTD 281
           R   L Y     L LT Y D
Sbjct: 241 RSMCLKYRSGSQLALTVYCD 253

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.0e-144
Identity = 261/280 (93.21%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1    MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
            MLKSIRILLSI TFYDYEIW+MD KTAFLN NLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 802  MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN VG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
            YLTDVKAWLAAQFQMKDLGEAQYVL IQIIRDRKNKTLALSQATYI+K+LV+YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
            GLLPFRHGVHLSKEQ  KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
            SNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTD
Sbjct: 1042 SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTD 1081

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.0e-144
Identity = 261/280 (93.21%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
           MLKSIRILLSI TFYDYEIW+MD KTAFLN NLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 676 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 735

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN VG
Sbjct: 736 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 795

Query: 121 YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
           YLTDVKAWLAAQFQMKDLGEAQYVL IQIIRDRKNKTLALSQATYI+K+LV+YSMQNSKK
Sbjct: 796 YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 855

Query: 181 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
           GLLPFRHGVHLSKEQ  KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 856 GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 915

Query: 241 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
           SNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTD
Sbjct: 916 SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTD 955

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy TrEMBL
Match: A0A5A7UZF3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1449G00020 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144
Identity = 259/280 (92.50%), Postives = 267/280 (95.36%), Query Frame = 0


Query: 1   MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
           MLKSIRILLSI TFYDYEIW+MD KTAFLNDNLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 144 MLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRS 203

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
           IYGLKQASRSWNIRFDTAIK YGFDQNV+EPCVYKKINK KV FLVLY+DDILLIGN VG
Sbjct: 204 IYGLKQASRSWNIRFDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIGNDVG 263

Query: 121 YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
           YLTDVKAWLAAQFQMKD+GEAQYVL IQIIRDRKNKTLALSQATYI+KMLV+YSMQNSKK
Sbjct: 264 YLTDVKAWLAAQFQMKDVGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK 323

Query: 181 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
           GLLPFRHGVHLSKEQC KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 324 GLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 383

Query: 241 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
           SNP LDHWTAVKIILKYL+RTRDYMLVYGAKDLIL GYTD
Sbjct: 384 SNPELDHWTAVKIILKYLKRTRDYMLVYGAKDLILIGYTD 423

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy TrEMBL
Match: A0A5A7U7T0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00310 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.2e-143
Identity = 259/280 (92.50%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 1   MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
           ML+SIRILLSI TFYDYEIWKMD KTA LN NLEESIFMSQ EGFIT+GQEQKVCKLN S
Sbjct: 488 MLRSIRILLSIATFYDYEIWKMDVKTALLNGNLEESIFMSQREGFITQGQEQKVCKLNRS 547

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
           IYGLKQASRSWNIRFDTAIK YGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN +G
Sbjct: 548 IYGLKQASRSWNIRFDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDMG 607

Query: 121 YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
           YLTDVKAWLAAQFQMKDLGEAQYVL IQIIRDRKNK LALSQ TYI+KMLV+YSMQNSKK
Sbjct: 608 YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKILALSQVTYIDKMLVRYSMQNSKK 667

Query: 181 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
           GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVML TRP+ICYAVGIVSRYQ
Sbjct: 668 GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLCTRPEICYAVGIVSRYQ 727

Query: 241 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
           SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD
Sbjct: 728 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 767

[Close]

BLAST of Cmc11g0295651.1 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.2e-143
Identity = 259/280 (92.50%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 1    MLKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQEQKVCKLNLS 60
            MLKSIRILLSI  FYDYEIW+MD KTAFLN NLEESIFMSQPEGFIT+GQEQKVCKLN S
Sbjct: 802  MLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGNYVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNV+EPCVYKKINK KV FLVLYVDDILLIGN VG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQNSKK 180
            YLTDVKAWLAAQFQMKDLGE QYVL IQIIRDRKNKTLALSQATYI+K+LV+YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVSRYQ 240
            GLLPFRHGVHLSKEQ  KTPQEVEDMRRIPYASAVGSLMY ML TRPDICYAVGIVSRYQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD 281
            SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT+
Sbjct: 1042 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTN 1081

[Close]

BLAST of Cmc11g0295651.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 132.1 bits (331), Expect = 7.4e-31
Identity = 83/274 (30.29%), Postives = 145/274 (52.92%), Query Frame = 0


Query: 2   LKSIRILLSIVTFYDYEIWKMDAKTAFLNDNLEESIFMSQPEGFITKGQE----QKVCKL 61
           L S++++L+I   Y++ + ++D   AFLN +L+E I+M  P G+  +  +      VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232

Query: 62  NLSIYGLKQASRSWNIRFDTAIKSYGFDQNVNEPCVYKKINKEKVVFLVLYVDDILLIGN 121
             SIYGLKQASR W ++F   +  +GF Q+ ++   + KI     + +++YVDDI++  N
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292

Query: 122 YVGYLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQATYINKMLVQYSMQN 181
               + ++K+ L + F+++DLG  +Y L ++I R      + + Q  Y   +L +  +  
Sbjct: 293 NDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLG 352

Query: 182 SKKGLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVMLYTRPDICYAVGIVS 241
            K   +P    V  S    + +  +  D +   Y   +G LMY+ + TR DI +AV  +S
Sbjct: 353 CKPSSVPMDPSVTFS----AHSGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLS 412

Query: 242 RYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK 272
           ++   P L H  AV  IL Y++ T    L Y ++
Sbjct: 413 QFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437

[Close]

BLAST of Cmc11g0295651.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 6.9e-13
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 103 VFLVLYVDDILLIGNYVGYLTDVKAWLAAQFQMKDLGEAQYVLRIQIIRDRKNKTLALSQ 162
           ++L+LYVDDILL G+    L  +   L++ F MKDLG   Y L IQI        L LSQ
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQ 60

Query: 163 ATYINKMLVQYSMQNSKKGLLPFRHGVHLSKEQCSKTPQEVEDMRRIPYASAVGSLMYVM 222
             Y  ++L    M + K    P    ++ S    +K P   +      + S VG+L Y+ 
Sbjct: 61  TKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSD------FRSIVGALQYLT 120

Query: 223 LYTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRT 262
           L TRPDI YAV IV +    P L  +  +K +L+Y++ T
Sbjct: 121 L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGT 149

The following BLAST results are available for this feature:

BLAST of Cmc11g0295651.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	2.1e-144	93.21	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	2.1e-144	93.21	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059556.1	1.3e-143	92.50	gag/pol protein [Cucumis melo var. makuwa] >TYK29968.1 gag/pol protein [Cucumis ...	[more]
KAA0050437.1	6.7e-143	92.50	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	8.7e-143	92.50	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0295651.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.3e-71	47.50	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.2e-39	34.38	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.4e-36	33.09	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.5e-33	34.17	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	1.3e-27	31.92	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc11g0295651.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	1.0e-144	93.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	1.0e-144	93.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7UZF3	6.5e-144	92.50	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1449G000...	[more]
A0A5A7U7T0	3.2e-143	92.50	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G0031...	[more]
A0A5A7T2V9	4.2e-143	92.50	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of Cmc11g0295651.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.4e-31	30.29	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.9e-13	35.85	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..184 e-value: 4.4E-44 score: 150.9
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..267
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 16..274

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0295651	Cmc11g0295651	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295651.1-exon	Cmc11g0295651.1-exon-CMiso1.1chr11:13235614..13236513	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295651.1-cds	Cmc11g0295651.1-cds-CMiso1.1chr11:13235614..13236513	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295651.1	Cmc11g0295651.1-protein	polypeptide