Cmc11g0295141.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295141.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Location	CMiso1.1chr11: 12323790 .. 12335613 (+)
Sequence length	910
RNA-Seq Expression	Cmc11g0295141.1
Synteny	Cmc11g0295141.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGAAAAGATATTTCGAAATCGCCCCAACCATCGTAGAAACCCCTCAGACCCAAAGTAGGGTTTTAGCTTTAACCCTCAGAGACAGCCATGAAGAAAGAGTCAATTCTCTCTTGTTCATATTCCGAAACCAAGAAGAACAACCTTCAGAATCTATCATTTCTTCTCATAATCAATGGCATCAATTGGTGCTCGGTCTGCTTTCCGGTCGTTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGTTTGTTGCTTAATGCTTTTGCAACCGTTTTAAGTGCGAAAAGTTTCTTAATCTAGAGCTCTTTGGGTTGTTTTTGTTCTCACTAAAAGTAGAGCAGGAAAACAGTGTTCAATCTTCATCTTTATTTCTCTCTTCAGTGTTTTAGTCGTGAAACGTTTCAGTAAATTAATGTTATCTATTTTGCTTGAAGGCGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCAGAGCTGCGGTTGGCTCCCCGAAGGTGCATAACTGATAATTTAATTCTTTACTTTCTTGATCTGTTATAGCTAGATCTAAACAATTTAGACCATATCCATAATTTTAGAATGAATTTTTCCGTGGACTAGAAAGAGTTGATAATTTTCTAGAAGCTTATTTTCTATATGCATTTGCTTTTCGTTGGATGAATTTTAGCTTTATAATTATTTTCATGAATCAAGAAAAATCAAGTCTGAGTGGGAATAATGATCAACTATATTTTGGAACAGTGATATCTATATTTAGGTTCAGGGGTCATATTAGCCACAGTGATCTGATGTTTCTGGCGAATGAGATATCTATGCTTGTATTCTATGATTAAGGTAGTTAATGTTTTTGAGTCACAAGAAGCTACATCTGAAGCAATATTATTTCGCGCCAAACCATCCATAAGAGATAAAACCAAGAAAGAGGAAGAAGGTTTGATTATCCAAATCCAAGAATCAGCAACCTCACGATAAAAGACAGACTGTAAATGCTGTGATAAAGCCATCCATTCAACAATTTTAGATTCCGTGAGATTACAGCGAAGACAAAAATCCCAAGCAGCAGCATCCCCGACCCAAACATCAGCCACCTTGATATCCGGAAAACGAGCCAAACGAAAAAGACGAGGGAAAATATTTGAGAGAATATAACAAATAAGCCAGGGAGCCTTCCAATATGAGATTGATGAATCGGTGTCAAGATGATGCTGTGTGCAGCTGGCCACCAAATCAGTAGTTTGGCAAATGAATCTCCAAGGAGATTTTGATGAACCCAAATAGAGGAAGGCCAAATGCAGTTAAAGGAATAGTATTTGGCCACAGTGAGTTGTCTCCACGAGGCATTAGATTCATGTAGAAACCACCAGATTCATTTGGCAAAAAGGGCACAGTTGCAAACACGATAATTACCAATACCCAAACCGTCCATCAGACGAGCACATTGTGTAGTCTCCCAATTAACGTTGTGCATCTCATCCATGCCTTGAGCTCCTTCCCTGAAAAAATCACGAATCAACTTCTCCAATGTTTAGATAACAACAGAAGGAGCATGACAAAGAGGGCAAGCAAGAGAGAATTCCGAATCAGTGTATGGCGACCCCTTTAGATGTATAGGCATATTTCCCATGAAGCTTATTATGCATGCGCTCAATAACCAGATGCCAAAAAGTAGTAGATGTAGAGTTACCACCTAAAGGCAAGCAAGGTAAGTAGAAGGCCAATGACTAAGCAAGGAACAAGCCAAAGAGTCCATGGTAGATGAACCTAAATTAATACCAAAAGCTCACTCTTTGAAAGATTAATAGTCAAACCAGCTTCATAGATATATATCATCTATAAAAGATACCGAAGAGTAGGAGTGTTTGTAGAGGAAAAGATTAAAGTATCATCAACAAATTGTAAATGGCTAAGCACAAAATAAGAGTCATCAATAGGATGAGCAACAATAAGGCCCTTGGATAAACTATGATCCATAAGACGGACAAGACAATCAACAACTAGAATGAATAAAAAAGGCGAAAGAGGATCATCTTGTCTAATGCCACGAGAATGGATAATCTTACCTCAAGGCCGACCATTAATAATCCTTAAGTTGCTTCAGCTTCATCACAAGACTGTGACCCGGATGGCCAGCAACGTAAGTATTGGACCACAAAGTGTCTACCAAATGTTTAAAGTCTTTGACTTGGAGCAACAAATTTCACTTGGAGCAACAAATTTTTGAAACGGAAAGGACAAGGACCCCAATCATAGTTTTCAAATATAAGAGCCAAAGGAAAATGATTCGAAGTAACACAGTCGAGACGTTGAGTTTTGGAGGAGCCGCTTGTCAAGAATAGTGTCAGTAGTAAAGAAGCAATCAAGCAAGGAGGATTATTGTGGATTTCCTCCATTAGACCAAGTATAAGTGCCATTGCATAATGGGATATTCCGTTGACATGCTCGAGAATTAAAGATGTCGTTAAAATGATAGGAAGGAAATGTGCAAACGGTACAAAAGATATTCAAAGTAAAGATATGTGATTGATTGAGTTTAAGGTACTCTAACTTCAAACTATATATATAAAAAATATTTGTAACCCAATTTTACTAATCAAAGTATTAATAAAATAAATGTAGTAAAGAGCAAGAAAGGCATCGTACCCAAGGGATTCAACGGTTAGGAAACAAAAAATCTTGGAATTAAAATTCAAGAATTCATGATCATGCAATAGGGGGTTTTAATGTGACAAAGCAAGAAAACGTAGAAACAAAGCAAGTAAATGTTTTTGTACCTTTTCGAGTAGTTTAGCACAAGAAAAAATAAGAATTCTCTCAACAAGATTTAAAGTGGGAATGGTTCATTCTAACAATTTTTCCACCATAGAACAAAGAGATGCATTGGAGTTCTAATTCAATCTACAACTAACTAGTTCAAGCCATTAATTATCCTTTGTTAATGAACAAGAAACAAGTCTAATTCATACTAAATTCAAAGAGAACATTTTCATCTTAGCAGTTTCCATGAAATCTTTAGAATTTGCATTTAGGCTTCAATGTTGTGACATCCAAGAGCAAGGGATGCCTCTATCTCAAGAATGGTTAATTAGTTGAAATTCTAATTGAAAATCAAAGAAAGATCAAAAGGAAATGACATGTTAATGATCAAATCATAATTTTCAACCATTCATGATTCAAAGAATATGCTTAGCGCCATTAGGAATCAAAGATAATTCGTGCAATCATGGGTGATCAAGCCAATCTAACAAGAGTTGGTTACAAAAGCAAGAATGGAATTTCCCTTGTACTTTGAGCATTAGTCTCGTTTCATTATATGAATTAAGAGACACGTTTTCTTTTTTAAAAAAACTAAAGATTGAATCAAGAAAGCAACTTAGACATGGGTTCTCAAGAAAAATATGCTAGAACTATCATTTCCAAAGAAAGTACCTCAGTTGTTCATCATCTTCGAAATAGCTTCAAAGAGAATTGCTAAGAAAGTAGTCATTTGTTGGAGAAATTTGAGAGAATTTTATTGAGAATTGAGAGAGAATTTACAAGTGATTTTGCTTTAGAATGGTCAAATTAAAAAAAATGAAGTGCTAGCTATGCAATTACAAGAGGAAAATGGCTTTAGCCGCTTAAGTCTATTAGGAGGAAAAATCCACGTGCGCATGTCTGAATTTGAAGTTCGTAGCCAAAGACGGGCGCTGCGACATTGGTTGCTTAGATGAGCTACTGTCTTTCGGCGTCGCAATGCTGGGGTGGGGCTTGACTTCAAAAAATGTACAAAAATGCCATTGAGTTTTTTTTTGGCACATTTTCGCTTGTTTTAGCTTTGAATTGAGTGATTTTTATTGTATGGGACTCCTTGACTTGTCTAGATTATTATTTTCTATAAAATGAGAGATTTAATGAATATGCTACCTCGTGAGTCTTAAGGTAGAAAACCTAGTTGATTTATAGTCCTACCCAACGTTAGCTGTTGCTCGTCCTGAGCAAGGAAAAGAAAAATTGCAAACACTCATTAAAAGAATTTTGTTCAAGTAAATTCATGCATTGATGGATGCAAGGCCTCATTATTTTTACTCACTATGCTTGCTTGAAAAGGTTAATGTACCTTAATTTGTATATAAGAAGGATTTCTTCTTATATAAAAGGCCCTCAATTGAACCCTCAGACAAACTAGGGAATGCTAGACTTAGAGATGCACTTATTGGGGTTCATTTCACACTAATATTGGACAACCCTTATTGCTCACGGAGGCATAACTAACCCTTCAACCGAAATGTGCAACCACTCGTTTTTTTTTATTGAGCTCTTGTTTCTTTCTCCATTTTTTATGCTTTTCTTTTTACATTCAAGCCACACATTTTTTATTTTCTAAGCAAACATTTGTTTTTCTTTTGCCACTCTTTTCTTTCTTTGGTATTTGTTTCTTTTTTCTCTCTTATGGCTAGCAAGCTTTTGCTTTGCTCCATTTTTTTTTCCAATTGGGCATTTTCCTATTCTAGGATTCACTAATAGACAAGATGGAACAATCGACCTTTTGAGGTGACAAGTAAATTTAAGTACTACTACCCTTTTCTAAAGTATCAATGGCTCAACATGACTTGGTGAAGTATTCAAATAATGCATGAGATGATGAGATTTTTTAAAATGGGCTCAAAATTGTGAATGCTCTTTTCCTATTAAAAATCATGCAAACTTAGGACAAGAAAAGTGTAGCATCAACCATCATGGTAAAACACCAAGCAACCAGAGAGAACATTCATGCAACTTTTTCTTTCTCTCATTTATGCATTCGATTATCATTAAAATCACAAACCCAAGCTCAGATGCTCAAAGGGCTATGCAGATCTGCATGAATCAAGGATAAAAGCAAGACTCAATTGATCATATGTAAAGCGAAATAATTTTTAAATTTGGCCAAAAATGCCCTAAAAGTATGCAAGAAAATATATGAGTTAAACCCAACCACCCCAACTTTAAAAGCATGCTTTGTCCTCAAAGCATAAAATAAAAGATGAATGTAAGAGAACGAAATGAAGGGAACGAAAACTCCCCTTGATCTTTGGGTGAGTGCATTTTGATTGAGCTCAGCTTGCCAATTGAAAGCTTGGTTTTACTCTTTCTTTGTATTCGTCCTATAATTCAAAAGAGATTCAAGATTCTCTCAATTTTCTTAGAAAGCTTAAAAGTACATGAAAACTATAAACTAAAAGAAATGCAAAAATCTAAAACTAGAAAGCGGTAAGTTGGACGCTTGACTGCCTCCAGGAAGTGCAAATTTTTAAGGTCGATTGCTCAATCGTACTTTCTTCTCAGACTCTAAGTGTAGAGGGGAAGAGATAAAGCCATCTTCAAACAATAAGCATTGGTTTCCCCTTCGCTGTAAATTTTTTTTAATCTATGTCCATTAACCTTGAAACATTTTCCTGTGTCTAAACTTTTTATATCCACTGCACCGAAAGGAGACACATTAGTAATAACAAAGGGACCTAACCAGTTTGATTTCAATTTGTCGGGCATAAGTTTCATCGTGGAATTGAAGAGAACTTTTTGACATACTTTAAAGTTTTTTCTAAAAGTCTACTACCATGAAATATTTCAGTTTTCTCTTTAAAGACCTTAGAATTTTCATAAGCATCTAACCTCAATTCCTCGGGTTCTTGTAAGTACAAAATTCTTTGCTCATCGGCCTTTTGTAGAGACGTTGCATTGCTTGACAGCCCGATACACCTTGTGCCCTATTTCTCTTGGGAGGTGGTAGTAAACAAGCTTAAGTGGGGTCGTGCCAATTGGAGTTTTGAAGGTCGTGCGGTATGCCCACAAGGCGTCGTTTAGGCGGGTACTCCAATCTTTCATCCTTGGACTGATGGTTTTATCATGTATGCTTTTCACTTCTCTATTAGAAATTTTGACTTGGCCATTGGTTTAAGGATGGTTCAGCGTTGGACACTTCCTCATCAAGGCTTCTACCATTCGGTTGCAAATTTGTGTCCCTTGATCACTAAAATGATAGCTTTCGGTACACCAAATCTAGAGAAAATATTGGAAACTAGAAATCCTGAAACAGAAGAGGTACAATTAGTCCTTGTGGGGATTTCCTCAACCCATTTTGAAACCTAATCGACCATAAGAAGAATATACAAATACCCACACGAGAAAGGAAATGGTCCCATAAAATCCATACCCCAAAAATAAAGACCATACCCCAAAAATAAAGAATTCTACATATCAATATGTAAAAAATAAAAAATAATAATAAAAAGAAGCTTACATATCAATATGGATTGTAATGGCATTTCGTTCCTCTAGATAGTGATTAAAATTTCGACACTAACACTTGATTTGCTATAAAAATGTGCATCAACAAATAAAGTGTTCCAAAATAGTCACTATATAGAGTTTTTTTAGCGAAGACTAAATGACCACAAGCTAATTCATGAAAAAAAGACAAGATGGATTCATACTCTTGTTCGGGAAATCACTTCCTAATGATTTGATCTGAACAATACTTCCATAAGTGTGGTGGTTCCCAAAAGTAATATTTTGCATCACACCTAGTTTACATTTTTTAGCAAAAGAGAGTTCATTAGGAAGATTACACGTCACCAAATTGTTGTCGGTATCGGTGTACTACGGGGGTTGATTGGAGGCTTGAAGAAGGTGCTCATCCAAGAAGTCTTCTCTCAAAGGAATTTCTTCTTCTCGCACGATCCGGCTTATAGATGATCCACTACAAAGTTGTCGACTTCCTTCCTATACTTGATTGTTAGGTTGAACTCTTGTAGAAGAAGAAACCATTGTAGAAGCCTCGTTTGACTCTTTTTTCAACACCAAGTACCTAATTGTTGCATGATCAGTAAAGATAGTTATTGGAGAGCCAAGTACATAGCTTCTAGACTTATCTAATGCAAAAATAATGGCAAGAAACTCTTTTTCGGCTGTTGTGTAGTTTGCTTGAGTTGGATTCAAGGTTCTCGATGCATAGTATATAACATGTGCTTTCTTGTCAATTCTTTGCCCAAGCACCGCTCCAACCGCTAGATTGCTAGCATCACATATTATCTCAAACGGAAGATCCCATCTAGGTGGTGGGAGAATAGGGGCGGTGGTCGACTTTTCCTTAAGCACATCAAAAGCTTTGCAACATTTTTCATCTACATTAAAAGGTACTTTGTTAGTAGTTAAAGGCAAAACAATTTTTAAAAAGTCCTTAATGAAGCATCTATAAAATTCCTCATGCCCTAGGAAAGATCTAATATCCTTAATGCATGTAGGATATGGCAAATTATAGATCACATCAATTTTTGCTTTATCTACCTCTATCCCGTTAGATGAAACTAGATGACCTAGTACTATGCCATGAAATGAAACTTATAATTCAGAACAAGATTAGTCTCAACGCATCTCTTCATTATCAATCCTAGATTACTCAAGCATTCATCAAAATTATCTCCATAAACAGTAAAGTCATCCATGAAAACTTCTATGCAATTTTCAACAAAGTCTGAGAATATGTTTAATTGCTCATCATACACCTTTGAAAAGTACCGGGTGCATTACATAAACCAAAAGGCATAGGTACTATAATTGCAAGTAAAAGTTGTTTTCTTTTGATCTTCTTGGACAATGGGGATTTGGTAGAATCCCGAGAATCCATCGAGGAAGCAAAAAAATGGTTTTCTTGCTAATCTTTTGATCTTTTGATCTGAAAAGGGTATGGGGAAATGGTCTTTTTTAGTTACCTCGTTTAGTTTGCGATAATCGATACACATCCTCCATTTGTTTTGAACTCCCGTTGGCACCATCTCACCTTTGTCATTCTTTGTCATGGTCATTCTGGTTTTCTTTGATACAACGTGGATTGGGCTTACCCATGTGATTGGGCTTACCCATGTACTATTGGGAACCATGTAGATTATGCTAGCGTCATTAAGCTTGAACATTTCTTTCATCACTACTTCCTTCAAAGTTTGGTGTGCTTGAACAACATCTTTTGCTCCATCTTCTAAGACGATGCAGTGCATACATAGTGAGGGACTAATTCCCCGGATATCATGAAGTGTTTGTCCATCTATAGCCTTCTTGTTTTCCTTTAACATTTCTATCAAATTTTCTTCTTGATTTGGTGTAAGCTCTCTTGATATTATCACGGGAAGCGTATTCTTCTCTCCTTAGAACATGTATTTCAAATGGGGTGGGAGGACTTTAAGCTGAATCCCTCATTCTTGTGGAGAAAAAGTAATCTCATCACAATCCAATTTATCAAAATCATAATCAATAGAGGGGGTAACAATCCCATTAACAATCTCATCAGTAATCTCGTCAACATTCTCATCAACATTCAACATCATGCATTTCAATAGAACAAAAGAGAAATGCTCCTCCGCAAATGTCATGGCATCAAAGATATTAAAAGAGACAATATCACCACCATCAAATTCTACACTACGTGAACCTTGGCCTACAATGATTATATTATAGCTTAAGTTGTTTTAAGAAAAAGTCTACCTTCTAGGTAGTGGGTGAAAGCCTAGTAGGTTGTCTATTCATTTGCAAGATATAAAAATCCACTGGAAATATTAATTCACTACTTTCACTAAAACTTCTATAATGCCAGGAGGAGAAATATATTTCGCCAATTGTATGCATATAGTTGTTTTTTGCAAATTATTTAGCTTAAGATCTTGAAAAACATTATATGACCCAGCACTTATGGAAGCCCCTCTGTCTAACATAGCATGTGAAACCATTCTATCTCCTATTGTGCCAGGTAAAGTAAACATGCTCGGGTCCCTACACTTTTTGGGTACCTCTCTTTTCAATAAGGTCGAAATATTCTCCACTAACTATCACTTTTCCTCACCTTTCGCTTTTCTTTTATTTGCGCAAAGCTCTTTGAGAAATTTTGCGTTCCTTGAAATTTGTTGAATTGCACCCAGGAGGGATAGGTTGATTTGTTCTTTCTTGAATACCTCCAAGAGCTCTTCATCCTTGCTAGCGTCCTTTTTATTGGGTGCCAATCTACTAGGAAAAGAAGGTTTAGGCACATAATGAGGAATTGAACGCATGAGATTTGCACACACCTTTTTGGTGGACAGTTGGTGTTGTGTTTCACTCTTTTCATCATCTTTTACCTCAAATTGGATTTTTGGAGGGGTCGGCACTCACAATTTGTTCTTGAATGGTGGAAGGTAGAATTTCTCTACTTCTAAGCATTATAGCACTTACGTTGGCATGCTCCGGTTGAGCGGTTACTTTTTTTTTCAAGTTTGCTCATTGTCGTAGCCATTTGTGTAATTTGATTTCCAAGATTTATGAGACCGGTCCTTGCTTCTTGTTGAAATGATTTGGTTTCTTGGTTAAGTTGGTGAAAGTCTTGTTTGAAACTTAAGAGAGTTGTTAGCCAAAGTCTTAACTATATTCTCTAGAGAAAAGGCTTGAAAGAAGTGGTTGGGATGGAAGGTCTTTGAATGTAGTGAGCTTGATTTCCCCATTTCATGTTTAGGATGGTCTCTTCATCCCGCATTACATGTTTTACTATGGGAATCATACCTTTTGTTGAAGCTTCCCATTGCATTTACCTCTTTTGTGATCTCGGGGCACTTGTTGGTTGGATGTCCGAGCAACCCACATACTCCACATAGCATAACTTGATGATTAGTCCGTTTTGCTAATTGAGTAACAAGAGAAGTTAGATTTGCAATTGAGAACGAAGTTCATTTACCTCTTTAGATGTCGGGTGATCCATGTCGGTTGTTCTACTCCCAAAGTTCTGGGAGTTCTTTGCCATTGTTGAGATAAAGCCACTAGCCTTCGACAGTGTTTTGTTGGCCAAAGCGCCTCTTGCCGCCACATTGATGGTATTGCGATCCGATGCCAACAAGCTCAAGTAAAAATATTGTATCAAGTATTGGACCGATATTTGATGGTGAGGGAAACTTGCACACAATTTCTTATACCTTTCGCAATACTCTGACAAGGATTCTCCAATAGCTTGTCGTATGCCATAGAGATCCTTTTGAATGTTGTGAGCTTGTGAGGTGGGGAAAAGTTTTCAAGAAACTTCTTCTCGAGGGTTGTCCATGTTATAATTGAACCCAGTTTGACGTATGCCTCTTTGTGCTATTGGTCAAGGAGAAGGGGAACACCCTCAAATTCAATTGTTCTTCCATAACGGCATGAGGTCTCATTGAGTTGCATACCAGAAATCTTTAAGATTTTTATGAGGTTCCTCCCCTGAACTTCCCTTGAAGATTGGTTAAAGATGTATTAGCCCAGGCTTCAATTCAAACGGGATAGTTGCCGGAATTACGATGCATATCAGCCTTTGTGTTAGATTGGGCTCGGCGAGTTCTCTTAGGGTCTTCTCACATACTTCCCCCATTCTTTTCTCTTCTTTGGTCTTCCTCTTTGTTTTTTATTTCTTCAAACTCTCTTGCTTGATTTTGATGTTGAAATTCATCTTGAAGATTTCTTTCTCCTCTCCTCTCCCTTCAAAGTCTCCTTTCCTCTCTGGTTATGTCTTCAAAAAAGTCAAACTCAATACCCTGGAGTTTCCCCTTTAAAGTTCTAGCGATGCTACCCCCCTGGGCCCACCCCCAAGACAAAGAAAAGAAAGCAAAAAAAACATCTAGAGATGATTCCATCAATAGGTTAAATGAGATGATTGTATTTGGAATGAAATAACAAACTATGATACTCTATTTCGTTCACTTTGTTTGTAAATGATTGTTTTTAACATGTTAAAAGACTACATATTCAATTTTATTCTGCAACTATACTGGACTACATCCCACTGGATCGTTGTAGAATAAATTTGGCTTCTACATAGTTTAAATATTGTTTTGCAAAGTTTACTTTGTTAATCAAGTATCTGGGTCTGTTGATTTATCTTTTCATTTCCACTACTTCATAAAGATGGAAGTTGCTAATTCATATATTACTCTGTCCATAAGTAGGATGGGAAGAAGTTTGAAGTGGTCAGTGGAAAGTTGAAGTCTTCTTTATGAATGATACACTGAAACATCCTTTGCTTCCAACTAGAATGAATGTTTGTAGTTTCCATGACCCAAAATTACGTCCTAAATTTCCGTCTTTTAAGTTTAAACTTGGAAAATGTCAATCTACACATCTCTTTGATGAGCATGCTCATCACCTACCAAATTATTTCTTGTTTTGATTAAAATATCAAACTGTCATTAATAACACACTGGCCACTTGTGTTCATCAGCATGGAATGATGATAAATGACAAGAGGATCTATACGGATGGTGACTTCTATCAAGTAGAAGCTTCCATGCTCCAAATGGTGGTTTGTGAAGAAGAGCTTCCGATCAATGGCAATGGATTATTGTTATTTGAAACTTGTCTTTACAATGTTGAGTTTTTGCTGTCTAACTGCCTCTTGTTTTGTTTTCTAGGGCGGTGATATTTAATCAGCATGTGTAGCATAAAGGTTTGCAACTGTTGATTTTGCCATTTTCATTGCTTATTTGTACCTCAAATTCAGATTCTTCATTAGAAGTATCCTAGTTTCGCCTAGATTATCTGAAACCCTGATTTATGGCTTTCAATTGGATTATTGGTATAATTGGCTTTCAATTGGGTTATGTAATCTATGAAGTAAAAGTGAAACTACTGGTGGAAGAACTAAATTAACTTAAATGAAATTGGTTCGTATAGATTTTGTCTTAC

mRNA sequence

TTTTGAAAAGATATTTCGAAATCGCCCCAACCATCGTAGAAACCCCTCAGACCCAAAGTAGGGTTTTAGCTTTAACCCTCAGAGACAGCCATGAAGAAAGAGTCAATTCTCTCTTGTTCATATTCCGAAACCAAGAAGAACAACCTTCAGAATCTATCATTTCTTCTCATAATCAATGGCATCAATTGGTGCTCGGTCTGCTTTCCGGTCGTTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGCGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCAGAGCTGCGGTTGGCTCCCCGAAGCATGGAATGATGATAAATGACAAGAGGATCTATACGGATGGTGACTTCTATCAAGTAGAAGCTTCCATGCTCCAAATGGTGGTTTGTGAAGAAGAGCTTCCGATCAATGGCAATGGATTATTGTTATTTGAAACTTGTCTTTACAATGTTGAGTTTTTGCTGTCTAACTGCCTCTTGTTTTGTTTTCTAGGGCGGTGATATTTAATCAGCATGTGTAGCATAAAGGTTTGCAACTGTTGATTTTGCCATTTTCATTGCTTATTTGTACCTCAAATTCAGATTCTTCATTAGAAGTATCCTAGTTTCGCCTAGATTATCTGAAACCCTGATTTATGGCTTTCAATTGGATTATTGGTATAATTGGCTTTCAATTGGGTTATGTAATCTATGAAGTAAAAGTGAAACTACTGGTGGAAGAACTAAATTAACTTAAATGAAATTGGTTCGTATAGATTTTGTCTTAC

Coding sequence (CDS)

ATGGCATCAATTGGTGCTCGGTCTGCTTTCCGGTCGTTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCATCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCCTACTTTCAGGCGTGCGCCTGTGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCAGAGCTGCGGTTGGCTCCCCGAAGCATGGAATGATGATAAATGA

Protein sequence

MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLESMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK

Homology

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BLAST of Cmc11g0295141.1 vs. NCBI nr
Match: XP_016901841.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 6.7e-44
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 96

[Close]

BLAST of Cmc11g0295141.1 vs. NCBI nr
Match: XP_016901880.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 6.9e-41
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFR APVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          SMMPFHSVSSSALMTSMLSISR SCGWLPEA NDDK
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDK 96

[Close]

BLAST of Cmc11g0295141.1 vs. NCBI nr
Match: KAA0053250.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK02920.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRQSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPE 90

[Close]

BLAST of Cmc11g0295141.1 vs. NCBI nr
Match: XP_011649977.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKPLSH TFR AP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          SMMPFHSVSSSALMTSMLSISR SCGWLPEAWNDDK
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK 96

[Close]

BLAST of Cmc11g0295141.1 vs. NCBI nr
Match: XP_011649973.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-38
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPS +SPFRMATNKPLSH TFR AP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          SMMPFHSVSSSALMTSMLSISR SCGWLPEA NDDK
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDK 96

[Close]

BLAST of Cmc11g0295141.1 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 5  GARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPV---------M 64
          GARS  R  + S+R AAA  G     + ++P       PL   T RR+P+         +
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAP-------PLFRATARRSPLLSPLRNPVEL 68

Query: 65 SFCLESMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDD 96
          SFC+ES++P+HS ++SALMTS LSIS Q+ GWL +A NDD
Sbjct: 69 SFCVESLLPYHSATASALMTSKLSISGQTYGWLSDACNDD 99

[Close]

BLAST of Cmc11g0295141.1 vs. ExPASy TrEMBL
Match: A0A1S4E0T5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103496019 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.2e-44
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 96

[Close]

BLAST of Cmc11g0295141.1 vs. ExPASy TrEMBL
Match: A0A1S4E1L9 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.3e-41
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFR APVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          SMMPFHSVSSSALMTSMLSISR SCGWLPEA NDDK
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDK 96

[Close]

BLAST of Cmc11g0295141.1 vs. ExPASy TrEMBL
Match: A0A5D3BUX5 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00220 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.2e-40
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRQSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPE 90

[Close]

BLAST of Cmc11g0295141.1 vs. ExPASy TrEMBL
Match: A0A5A7UI59 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00160 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFR APVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISR SCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of Cmc11g0295141.1 vs. ExPASy TrEMBL
Match: A0A5D3BHH0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00120 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPVMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFR APVMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRQSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISR SCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of Cmc11g0295141.1 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRRAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRQSCGWLPEAWNDD 96
          +P+H+ ++SAL+ SMLS+SR+  GW+ +  NDD
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDDCNDD 94

[Close]

BLAST of Cmc11g0295141.1 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 )

HSP 1 Score: 63.9 bits (154), Expect = 7.9e-11
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 5  GARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRRAPV---------M 64
          GARS  R  + S+R AAA  G     + ++P       PL   T RR+P+         +
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAP-------PLFRATARRSPLLSPLRNPVEL 68

Query: 65 SFCLESMMPFHSVSSSALMTSMLSISRQSCGWLPEAWNDD 96
          SFC+ES++P+HS ++SALMTS LSIS Q+ GWL +A NDD
Sbjct: 69 SFCVESLLPYHSATASALMTSKLSISGQTYGWLSDACNDD 99

[Close]

BLAST of Cmc11g0295141.1 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 6.7e-10
Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRRAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          +P+H+ ++SAL+ SMLS+SR+  GW+ +  ++ +
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDETR 95

[Close]

BLAST of Cmc11g0295141.1 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 6.7e-10
Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRRAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          +P+H+ ++SAL+ SMLS+SR+  GW+ +  ++ +
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDETR 95

[Close]

BLAST of Cmc11g0295141.1 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 6.7e-10
Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKP---SSTSPFRMATNKPLSHPTFRRAPVMSFCLESM 65
          ARS FRS +  A   A    + PKP   S+ + FRM    PL++  FR    +S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRQSCGWLPEAWNDDK 97
          +P+H+ ++SAL+ SMLS+SR+  GW+ +  ++ +
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDETR 95

The following BLAST results are available for this feature:

BLAST of Cmc11g0295141.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901841.1	6.7e-44	100.00	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ...	[more]
XP_016901880.1	6.9e-41	96.88	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ...	[more]
KAA0053250.1	1.7e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK02920.1 protei...	[more]
XP_011649977.1	2.9e-39	93.75	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]
XP_011649973.1	4.2e-38	92.71	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]

BLAST of Cmc11g0295141.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	1.1e-09	44.00	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Cmc11g0295141.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0T5	3.2e-44	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucumis ...	[more]
A0A1S4E1L9	3.3e-41	96.88	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A5D3BUX5	8.2e-40	100.00	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7UI59	2.6e-38	97.78	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3BHH0	2.6e-38	97.78	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Cmc11g0295141.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28395.4	2.7e-11	41.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20585.1	7.9e-11	44.00	nuclear fusion defective 6	[more]
AT1G28395.2	6.7e-10	38.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	6.7e-10	38.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	6.7e-10	38.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..90
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..90

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0295141	Cmc11g0295141	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295141.1-exon	Cmc11g0295141.1-exon-CMiso1.1chr11:12323790..12324113	exon
Cmc11g0295141.1-exon	Cmc11g0295141.1-exon-CMiso1.1chr11:12324304..12324425	exon
Cmc11g0295141.1-exon	Cmc11g0295141.1-exon-CMiso1.1chr11:12335150..12335613	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295141.1-five_prime_utr	Cmc11g0295141.1-five_prime_utr-CMiso1.1chr11:12323790..12323964	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295141.1-cds	Cmc11g0295141.1-cds-CMiso1.1chr11:12323965..12324113	CDS
Cmc11g0295141.1-cds	Cmc11g0295141.1-cds-CMiso1.1chr11:12324304..12324425	CDS
Cmc11g0295141.1-cds	Cmc11g0295141.1-cds-CMiso1.1chr11:12335150..12335169	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295141.1-three_prime_utr	Cmc11g0295141.1-three_prime_utr-CMiso1.1chr11:12335170..12335613	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0295141.1	Cmc11g0295141.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy