Cmc11g0292111.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc11g0292111.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 7717438 .. 7720110 (-)
Sequence length2413
RNA-Seq ExpressionCmc11g0292111.1
SyntenyCmc11g0292111.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGGGTTCATAATTAAATTTTTAAGATCTATAAAGAATCAGTTCACACAAAGTTTTACCATAGTTTCTCCACCAAGCCAACCCAATTAAGAATACAACAGAACAGAACCTTGCAAACAAACCTAGAGAAAGGAAGAGAGAGAGAGTGCAACAGAATCCCAATAGCATTTTTTACTAAAAGAAAAGATACCTGTTGTATGAACGGAGGGTGATATACAATCATGATAAAGATCCCAAGGAGTTCATAGTTTCATACAGATAGCTTTCAATGGCTGGTGCCAAGCAAAGGAAAAAGTTTATAATGATACAAAGTATGCATTTTGAGGGGGTTGGGGAAGCTGGATCAGCATACCTTGTAACAGGTATCCTTCCCGTTATTTTTTCACCAAAGCAGAATGAATGCCATAAATACTGTTTCTAATTTCCCCCTTTATTCCAATGAACTGAATCCGAATTCATGGGGCTGAATTCTATGATGGCTGCAAATTACACCATCAGGGCAAGTATCTAAACTGTCAACTACTTTAAAAATCAAAATGAGTTGAGTTAGAACAGAGGATGTACACTGAGCTCATTTTGTACAATTACATTTACAGCACTGTATTGAGAGGGAGGAACACCAAGAACCTAAATTGCTACCTGACTAACCCAATTCATTAGCAATTTCAAGATGGGTTCTTCACAATCTTAACATTGCTGTAGAAACGCTTCAGGTCCTTTATAGCCTTCTCCTCAATTTGAATTGAACGAATCGAAGATGGTGTGTCAACTTCTGGTTTGAACCAGCGGTTTATTCCACTGGAATCTGATGGAGAGCCTTGACCAGAAGTAATTGAAAAGCCAGCTGTTCTCACCTTTGGACTATTTGATAGTACTTGTTGTTGTTTTCCTTTCTGCGAGATAAGAAAAACAAATAGCAGTGTCAGATTCCTGCTTGAATAAATTAAGAATTGACTTCAACTTTGAACTAATCCAAAAGAACAGAGAGATGAAAAGCTGGCCTACCTGCTGCATCTGAATGTCCCTGAGAGATGGCCGAGAAGGGGGAGGAGTGCCAGATGCAGACCAGGGAGGAGTGTTTCTTTCTCCATCAGTAACTTGAAAGGCTTGACTCGGGACGACAGGTATTGGCTTGGAAGACAAAAATGAAGCAAATCGAATTTTCCCTTCGCTTTTACAGTCCAAGAGATCAGCCTGTTCTTTGCTCTCACTCATCTGCTTCCCTATTGTTTTCCTCTGCTCATCCTGAATTTCACGCAAGGTTGTAGACCCCTTGGCAACTTTAGCCCCACCCCAGGCTGGGCCTTCCATTTTAGGCGGTGGTGGGGGTGCAGGTGCAGCTACATCTTTGGTCATATCATCAAGAGCACCACTCAAGAACATCGACAGCCCACCCTTCCTATTTTTCTTCTTCTTCGTAGCTGTTGGATATGAATTTTTATCCTTTGACAAGTCTGCACTTTTCACCGAACTTGAATTGCTTTTCTTCAAATTACAAGTGGATGACTCAAGAGTATTAGTATTGTTAGCTGTTTCTTCAAAGATGGTGTTGTCTCCCTGTTGGATATAATCAATCAATTTTAAGTCGAAGAAAAACAAACGAAAATCGCAATCAAGGAGGGTAAACACAATGCAGTAATCTAGTTGAAACTAAAATGTGAAAAAGGTTGAGCCAGGTACAAAACAACGGAAGACCACAGTCATTACTGAAAATTTGGGCAATGTAGTTTCTAATCAAATGGCCGTTAGGCTGCTAGTACTACATTTTGTTTTTGATGAAACAAAAACACCTTTACGACTCGGAGACAAATAACATATTTGAGTAATTATTTCAAAAACTTCCTTTTAGTTTTTTGGCCTATTTAACAACAATTGAAATTATTTTTACCTCAACCTAAACAATAGCACCACAACTCTTCAAAATAGTTCAAAAAATCAGAAACTTGTTATCGAAGGGGCTTAGCTCCTAACTGAGCTCCCCCAAATAATAAAACAAACAAATAAAATTTCAGCCTAACCTTATTCTTGGCAACTGAAAGCATTTCAACATCACAGGACCCTTCTATATGATCTGATTCTACAGCAGATTTGGTAAAACCAGCTGAAGTTTCCAAGGGTTCTAGTTTGCTTTTGTTCCTCCTCCTATGTTTTTTTGATGCCACAGTGTTTTTATTTCCTTTGTCTTCTGGAGCCATTAAAGATGGTTTTTCCAGCAGGTTACCCACTGGAACACCAAGATCCAGAAGTGAACTTTCAAGGGCAGTCTTGGTTTGGAGCTTTGCAATTTGTTGTTCGTCAAGGAGATATCCACAGGACTGTTTTGATTCAAGCATCTCAATTTGCTGCAACTTTTTCCGCAAGGCACGAATTTGTTTGGAAATGGCTTCATTTTGATTACCTTCGTGGAAAAAAGAATCTGATCTTCGTTCCATTTCTTTTGTCATGTTACTCATCAAATGATTCTCTCGGGACCTTAAAATCTCATTCTCACTATCCTCCTCTTCACTGTTAATAATGACAGGCAAAGTAGCAGTTGCAGTTGGGAGTCGACGATAGCTCCATGGCTCAGATGACTTTAGGTCTAACAACTTCTCGAGCTTAGCCATAACATCAGGAGAAGCATTGGCAATAGCTTGTGATGCCACTGTAAAAATGTAGTCAAGGTTCCGAATA

mRNA sequence

CATGGGTTCATAATTAAATTTTTAAGATCTATAAAGAATCAGTTCACACAAAGTTTTACCATAGTTTCTCCACCAAGCCAACCCAATTAAGAATACAACAGAACAGAACCTTGCAAACAAACCTAGAGAAAGGAAGAGAGAGAGAGTGCAACAGAATCCCAATAGCATTTTTTACTAAAAGAAAAGATACCTGTTGTATGAACGGAGGGTGATATACAATCATGATAAAGATCCCAAGGAGTTCATAGTTTCATACAGATAGCTTTCAATGGCTGGTGCCAAGCAAAGGAAAAAGTTTATAATGATACAAAGTATGCATTTTGAGGGGGTTGGGGAAGCTGGATCAGCATACCTTGTAACAGGTATCCTTCCCGTTATTTTTTCACCAAAGCAGAATGAATGCCATAAATACTGTTTCTAATTTCCCCCTTTATTCCAATGAACTGAATCCGAATTCATGGGGCTGAATTCTATGATGGCTGCAAATTACACCATCAGGGCAAGTATCTAAACTGTCAACTACTTTAAAAATCAAAATGAGTTGAGTTAGAACAGAGGATGTACACTGAGCTCATTTTGTACAATTACATTTACAGCACTGTATTGAGAGGGAGGAACACCAAGAACCTAAATTGCTACCTGACTAACCCAATTCATTAGCAATTTCAAGATGGGTTCTTCACAATCTTAACATTGCTGTAGAAACGCTTCAGGTCCTTTATAGCCTTCTCCTCAATTTGAATTGAACGAATCGAAGATGGTGTGTCAACTTCTGGTTTGAACCAGCGGTTTATTCCACTGGAATCTGATGGAGAGCCTTGACCAGAAGTAATTGAAAAGCCAGCTGTTCTCACCTTTGGACTATTTGATAGTACTTGTTGTTGTTTTCCTTTCTGCGAGATAAGAAAAACAAATAGCAGTGTCAGATTCCTGCTTGAATAAATTAAGAATTGACTTCAACTTTGAACTAATCCAAAAGAACAGAGAGATGAAAAGCTGGCCTACCTGCTGCATCTGAATGTCCCTGAGAGATGGCCGAGAAGGGGGAGGAGTGCCAGATGCAGACCAGGGAGGAGTGTTTCTTTCTCCATCAGTAACTTGAAAGGCTTGACTCGGGACGACAGGTATTGGCTTGGAAGACAAAAATGAAGCAAATCGAATTTTCCCTTCGCTTTTACAGTCCAAGAGATCAGCCTGTTCTTTGCTCTCACTCATCTGCTTCCCTATTGTTTTCCTCTGCTCATCCTGAATTTCACGCAAGGTTGTAGACCCCTTGGCAACTTTAGCCCCACCCCAGGCTGGGCCTTCCATTTTAGGCGGTGGTGGGGGTGCAGGTGCAGCTACATCTTTGGTCATATCATCAAGAGCACCACTCAAGAACATCGACAGCCCACCCTTCCTATTTTTCTTCTTCTTCGTAGCTGTTGGATATGAATTTTTATCCTTTGACAAGTCTGCACTTTTCACCGAACTTGAATTGCTTTTCTTCAAATTACAAGTGGATGACTCAAGAGTATTAGTATTGTTAGCTGTTTCTTCAAAGATGGTGTTGTCTCCCTGTTGGATATAATCAATCAATTTTAAGTCGAAGAAAAACAAACGAAAATCGCAATCAAGGAGGGTAAACACAATGCAGTAATCTAGTTGAAACTAAAATGTGAAAAAGGTTGAGCCAGGTACAAAACAACGGAAGACCACAGTCATTACTGAAAATTTGGGCAATGTAGTTTCTAATCAAATGGCCGTTAGGCTGCTAGTACTACATTTTGTTTTTGATGAAACAAAAACACCTTTACGACTCGGAGACAAATAACATATTTGAGTAATTATTTCAAAAACTTCCTTTTAGTTTTTTGGCCTATTTAACAACAATTGAAATTATTTTTACCTCAACCTAAACAATAGCACCACAACTCTTCAAAATAGTTCAAAAAATCAGAAACTTGTTATCGAAGGGGCTTAGCTCCTAACTGAGCTCCCCCAAATAATAAAACAAACAAATAAAATTTCAGCCTAACCTTATTCTTGGCAACTGAAAGCATTTCAACATCACAGGACCCTTCTATATGATCTGATTCTACAGCAGATTTGGTAAAACCAGCTGAAGTTTCCAAGGGTTACCCACTGGAACACCAAGATCCAGAAGTGAACTTTCAAGGGCAGTCTTGGTTTGGAGCTTTGCAATTTGTTGTTCGTCAAGGAGATATCCACAGGACTGTTTTGATTCAAGCATCTCAATTTGCTGCAACTTTTTCCGCAAGGCAAAGTAGCAGTTGCAGTTGGGAGTCGACGATAGCTCCATGGCTCAGATGACTTTAGGTCTAACAACTTCTCGAGCTTAGCCATAACATCAGGAGAAGCATTGGCAATAGCTTGTGATGCCACTGTAAAAATGTAGTCAAGGTTCCGAATA

Coding sequence (CDS)

ATGGCTGGTGCCAAGCAAAGGAAAAAGTTTATAATGATACAAAGTATGCATTTTGAGGGGGTTGGGGAAGCTGGATCAGCATACCTTGTAACAGGTATCCTTCCCGTTATTTTTTCACCAAAGCAGAATGAATGCCATAAATACTGTTTCTAA

Protein sequence

MAGAKQRKKFIMIQSMHFEGVGEAGSAYLVTGILPVIFSPKQNECHKYCF
Homology
The following BLAST results are available for this feature:
BLAST of Cmc11g0292111.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc11g0292111.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc11g0292111.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc11g0292111.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc11g0292111Cmc11g0292111gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0292111.1-exonCmc11g0292111.1-exon-CMiso1.1chr11:7717438..7717589exon
Cmc11g0292111.1-exonCmc11g0292111.1-exon-CMiso1.1chr11:7717750..7717894exon
Cmc11g0292111.1-exonCmc11g0292111.1-exon-CMiso1.1chr11:7717995..7720110exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0292111.1-three_prime_utrCmc11g0292111.1-three_prime_utr-CMiso1.1chr11:7717438..7717589three_prime_UTR
Cmc11g0292111.1-three_prime_utrCmc11g0292111.1-three_prime_utr-CMiso1.1chr11:7717750..7717894three_prime_UTR
Cmc11g0292111.1-three_prime_utrCmc11g0292111.1-three_prime_utr-CMiso1.1chr11:7717995..7719689three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0292111.1-cdsCmc11g0292111.1-cds-CMiso1.1chr11:7719690..7719842CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc11g0292111.1-five_prime_utrCmc11g0292111.1-five_prime_utr-CMiso1.1chr11:7719843..7720110five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc11g0292111.1Cmc11g0292111.1-proteinpolypeptide