Cmc11g0287801.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0287801.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 2686951 .. 2691794 (+)
Sequence length	2429
RNA-Seq Expression	Cmc11g0287801.1
Synteny	Cmc11g0287801.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGAATTGCAAGTGCACCGAATGCATGGGCGAATCAGTAAACTCACAAAGTAACCTTTCATCCCCTCTTAAAATTTGAATCATTCATAAAGAAAATCACTTTTCATTCGGATGAATCACCTCTTAATGCTGATGTGATGAACCAAATTATTAAAGATGTTACAATTGTCAATCACAAATCAAAATCCAACTGCTCCTTTCTTCTCCGATTTAGTAATGAAACACAGTAACATTGTACTCTATAATCGCATCGCCATTACTCACATTCAAGTAATGTGTCTTCAGCTTCGCAAACCCTCTAGCCATCCTAAACTTCCCTCTCCCGCCAACAATCGCCACCTCCCGTCGTCGCTCCGTCACCGGATTCCTCGAGAACACGCTGAGGGAGCTGCCGTTGAACGGTCCCGTTGTGAAACCGTAATCAATATACATCGCCAAGCACAAGTCTGCGCCTTGGCTTGCCGATACGTACAGCCCACGCGCGTTTCCGATTACTTTTGATTCCGGGTCGGGTCCTTCCCGGAGCGGGTCGTCCACGGCGTAGACGCTACCGAATGGAGTCGCTGACTGATCGCCTATGGTTATGTTTGAACGCGCTACTTCGACGGCGCTGGGTTTTTTCCCGCTCAGGATGTCGAAAAGGAAAAAATGGAGATTGGTTACCTTCTCCTTTAACTGAACCCTTGGGACAGTTTTGGAGTAATACTCGGAACGCGCAGATACGGCGGAGAGGAGGAGGACGAGAACCCCCATCGCTATCTTGGTAATCTCCATGTTCCTCTTCATTCTCCTACTATTGAATGTTGCGGAACTGGTTCTTGATTCTTATACTGCATGATTGAAACCGATGGTTCTTGCAATTTAATTGTATTTACTAATTAGGAATGGTAACGAAGTCTTGTAATTTATCATATTTATAATATGGGTGATGTTTATATTGAAATGGAAAGTTAATGCTAGTTTGGATTCACCTCTGGCCTTCCTTTCATGGAGATTTCTATATCAATATACCGTTGAAAGTCAATTACAACTCTGTCTTTGAATCCATTACCAATGCAAATGCGTTACAAGTGAATTTGTCTTAATAAGATGGAAATGCATTGTAGGGAAAATGGATTTATATAATGAATATCATCTTGGTTATAAGAAAAAAGTTTGGTCAATCCGAGCATAATTTAGGATAAGACACTAATACTTTGAGAGAGCATGAGATATTGATTTAGCTGAAGGCTCTTTCAATATAGAACTGCATTTTGTTGGCAGATGATACATATGGATCTAGAAACAGATTCATTATACATATCTAGGTTCATTAGAAATGAAAGAGGGATCAATGATGATCATTTCTCATAATCGTAACGTTTAGAGATTATGCCGAACAGGTTTACTGGCAGGGCTTCCTTTCTTCATCTAGAGTTAGTTAAATTAGCCATAATGAAGTTTGGCTTGAGGAAGAATTGTGTGGATGTTGAGTACCCTTAACTCCAAAGATAGATGTTGTTTCTTTAAGCGATTTGAATAATAAAATTAGTCTTTTATCTCAAGGGGGGATGAGAATTGTGAAAGATAGTGTTGATGCTTCTTCTGTGCTTGTAGATGAATGAATGTTTGATCAGAAAATCTTGAACCATTAGGCTACGTAAAAGCATTGCCGTCTAACTCACTGGAGCAAGATCAATCAATACCCTAAATCATCCATGACGCTGCAATTGCCTTGGTTCTTTCTACAGAACCTCTGGAGAAGTTAAACAAGTGTACAGTTCATGTCATATGCCAAAATATCAAAAGAAAATGTGTTAAAATTAATGGAAACATTTTACTACTTATTGAAGCGTGCAGCTTTATCACAAGGATAAACAATTGCCATTCTAATTGCTTCTGGTAAACTTATCAAAGTCTGTCCTAAAAAATTTCATACGTGGTTGAATCACTTTTTATGTCTCCCAAGTGAAGGGGACTTTCTACCCATAGTCAAATGCTCAAATCCATATGCAATCTCTATCAACCTTGGCTCAAACCCTTTTAATCCTCCAAAGCCAATGCCAAAGGGAAGCCCTTGAGGGTTATATCCAGCTGGTACACTAACTCCAGGAAAACCTCCAATTGCAAGAAAAGGAGAGATTAACCGACCAGGAGCTGCTATTGCATCAAGCTTATTCTTAATCATCAATCTCTCAAATCCCTCTTTTGACAGTTTTGCTAATCTGGCTAATGCTGCCTTTTCTGCACCTCCGATTCCTTTTGTTGCTTCTGCTTCTAAGAATAACTCCTGACCATACTCCCTTAGCTTTTCCTACATATTAACAAGATTTCATTGTTATGATAGTCCGCTTTTTGCTATGCTGATCGTAAAATTAGAACAGAATAGATGATAATTGCTCACAAGTTTTGAGTTCTTTTTGTTGAATTCTATTGCATCTGACAGGGATCGAATTGGAGATGCAACTAGCTGTTTGAGGTATGCATTTAGGGATATTTTGAACTCAGCAAGCAATGCAGTCCGCTCTCCACTTGAACTTCCAGTGATTACATCAAACCTGTCGATCGTCAAATTGTCTACCAATATTGCTCCTCCTTGCCTTTCATGTTATTGAAGACAAAAGAGTTGGATAAAAACCTCTAACATGAGTCATTAAGAAATGGTTTATGAAAAGTGAGTTTTATTTCTTACTTCAGGGTTTTGAAAACTTTCTCAAAAGCTCCAATGTAGAAGACATCATCATGGCCGAAATCATACAATTTCCTCACGATTCCTATTCTCTTTCCTTTCAGCCCTTCAGCCCTTAGAAATTGGCCATATCCACCTCTTGGAATGTATTTTGATGCTTCAATTGTTGAATTATCATATCTGTCCGCTCCTGCAATGGCATCTAGAACATAAGCAGCATCTGCTACTGTTCTACAAATAGGCCTGTTCCATCATTAGTCAATCAGCAGAAAATACTTCCTTTGGATACTTAATAGAAACAGTTCAATAGAAACAAATTGATTACCCAACAGTGTCCTGCCTCAAAGAGATCGGAACGACCCCTGCCCGACTTGTGAGACCTACTGTGGGTTTGATGCCAACTACTGAGTTGAGAGTAGAAGGGCATAATATTGATCCATCAGTTTCGGTTCCCAGTGAAACTGTAACCATATTTGCTGCAACGGATATGGCAGAGCCGCTACTTGAGCCACACGGTTCTCCCATTGTGTAAGGATTCTGCAAACATATCCTCTGCTCTTAGTCTATTGTTGATTTAACTCTAATGTTTGATGTCTTTTAATTAGACTTTCTAATTGACTGATTTTTTTTTTAAAAGATAGCTTAGAGGCTGATATTAACAATATATTTTTAGTTAAAAACTTAGAAGGATTGTTTATTGGCCGAATCTGAGTAGTTCTACACTTTCAAAATCTTCTTTAGTTATCCTATTATTTGAAATATATTTTGAGATGTGACGTCCTACTGTGTGGTACAGATTCATTATTGTGTGATTTCACTTAGAAGCGGACAATTATTGAAGAAGTTGGAAAAGTTACACACCTTCCCTTGGCCACCCCTAGCGCTCCAACCATTGGGCGGTTCATAGGACCTGAAATCGGACCACTCACTTAGGCTCGCTTTCCCAAAGATAATTGCACCTGCCTTCCTCAACTTAGTCACCACACCTGCATCACGAGGAACAATAGAGCCAAGCAGAGCAAAGGAGCCAGCCGTTGTGTTGAGCTTATCCTTGGTTGCAATGTTATCTTTTACAAGTACAGGGATGCCATGAAGTGGAGACAAAGATCTCAGTGAGCTTCTCTTGCGCTTGAGATCGGCTTGAGAGGCTTGGTTTAAAGCATCTGGATTCACTTCTATGATCCCTTTCAGGATGGGGTTTAATCTACGCACTTGTTCGAGGTAAAACTCAACGAGTTGCCTCGAGGTGAGTTTGTTTTGGTAGAAAGCAAGTTGGAAGTCTTTCAAAGTTGCTTCTTCAATGGAAAAGTTGGTGTCAAAGCTACAACTCCCACTCCCATATAATGATAAAATCGCCAACAAACCCAGAAGCATGGATATGTAAATGGGAAAGCTTTGGGTAGCCATGGGAGCTTAGTTCATGAATCTGTTTTTTTTTATCAGTCAACGATCAAGTGGAGTATGCTCCACTCCTTAGTGGAAATATCTTTTTGAGAATCAAGAATACTTTAATGCTTAGACTCTTTTGTTTTTTTTTTTTTTTAATGGAGATTGAAACTTTTAACTTGGAGTTGAATGTATGTTTTAATAAGAAGATTTGTCTTAATAAGTTGAAGTATGCTAAGATATGTGTGCCGCTTTTAAAAATATCATTTACCTAAACTTTGTATTTGTGATTTTAGTTCATTTTGTTACATGAGAGAATATCTCTTTTTTTACTTGAATTTGTAGTGACTCTCGAATTCAGGTCGGATCCTTCTCAGAGGGGGTCGTTGACAGCGTAGATGCTGACGAATGGTGTTGCCGATTGGTCGAAGTTTGGGTGCGTCATTTGGACAGCGCTGGTTTTTTGCTGCTGAGAACGTTGAAAAGGAAGAAATGGAGATTTGTTAACTTCTCCTTTAATTGAACCCTCAAGGCAGATATATCGTCCTGAATTTCCATCTTTTTTATTTCTCTAAAACAGTATTATCATCAATACACTGATATTGGCTCTCGTCGACTTGGTTCTTGATTCTCATATTGCATCATTGAAGCCCATTGTTCTTGCAATTTGATTGTCTCGTCTAATTAGGAATGGTAATGAAATCTCGTTATGTATCACATTTGTAGTCTGGGTTAGGTTCCACTACAATTTATACTGAACTGGAAAGTAAATCACAACTTGGATTCAC

mRNA sequence

TTTTTGAATTGCAAGTGCACCGAATGCATGGGCGAATCAGTAAACTCACAAAGTAACCTTTCATCCCCTCTTAAAATTTGAATCATTCATAAAGAAAATCACTTTTCATTCGGATGAATCACCTCTTAATGCTGATGTGATGAACCAAATTATTAAAGATGTTACAATTGTCAATCACAAATCAAAATCCAACTGCTCCTTTCTTCTCCGATTTAGTAATGAAACACAGTAACATTGTACTCTATAATCGCATCGCCATTACTCACATTCAAGTAATGTGTCTTCAGCTTCGCAAACCCTCTAGCCATCCTAAACTTCCCTCTCCCGCCAACAATCGCCACCTCCCGTCGTCGCTCCGTCACCGGATTCCTCGAGAACACGCTGAGGGAGCTGCCGTTGAACGGTCCCGTTGTGAAACCGTAATCAATATACATCGCCAAGCACAAGTCTGCGCCTTGGCTTGCCGATACGTACAGCCCACGCGCGTTTCCGATTACTTTTGATTCCGGGTCGGGTCCTTCCCGGAGCGGGTCGTCCACGGCGTAGACGCTACCGAATGGAGTCGCTGACTGATCGCCTATGGTTATGTTTGAACGCGCTACTTCGACGGCGCTGGGTTTTTTCCCGCTCAGGATGTCGAAAAGGAAAAAATGGAGATTGGTTACCTTCTCCTTTAACTGAACCCTTGGGACAGTTTTGGAGTAATACTCGGAACGCGCAGATACGGCGGAGAGGAGGAGGACGAGAACCCCCATCGCTATCTTGGGATCGAATTGGAGATGCAACTAGCTGTTTGAGGTATGCATTTAGGGATATTTTGAACTCAGCAAGCAATGCAGTCCGCTCTCCACTTGAACTTCCAGTGATTACATCAAACCTGTCGATCGTCAAATTGTCTACCAATATTGCTCCTCCTTGCCTTTCATGTTATTGAAGACAAAAGAGTTGGATAAAAACCTCTAACATGAGTCATTAAGAAATGGTTTATGAAAAGTGAGTTTTATTTCTTACTTCAGGGTTTTGAAAACTTTCTCAAAAGCTCCAATGTAGAAGACATCATCATGGCCGAAATCATACAATTTCCTCACGATTCCTATTCTCTTTCCTTTCAGCCCTTCAGCCCTTAGAAATTGGCCATATCCACCTCTTGGAATGTATTTTGATGCTTCAATTGTTGAATTATCATATCTGTCCGCTCCTGCAATGGCATCTAGAACATAAGCAGCATCTGCTACTGTTCTACAAATAGGCCTGTTCCATCATTAGTCAATCAGCAGAAAATACTTCCTTTGGATACTTAATAGAAACAGTTCAATAGAAACAAATTGATTACCCAACAGTGTCCTGCCTCAAAGAGATCGGAACGACCCCTGCCCGACTTGTGAGACCTACTGTGGGTTTGATGCCAACTACTGAGTTGAGAGTAGAAGGGCATAATATTGATCCATCAGTTTCGGTTCCCAGTGAAACTGTAACCATATTTGCTGCAACGGATATGGCAGAGCCGCTACTTGAGCCACACGGTTCTCCCATTGTATTCATTATTGTGTGATTTCACTTAGAAGCGGACAATTATTGAAGAAGTTGGAAAAGTTACACACCTTCCCTTGGCCACCCCTAGCGCTCCAACCATTGGGCGGTTCATAGGACCTGAAATCGGACCACTCACTTAGGCTCGCTTTCCCAAAGATAATTGCACCTGCCTTCCTCAACTTAGTCACCACACCTGCATCACGAGGAACAATAGAGCCAAGCAGAGCAAAGGAGCCAGCCGTTGTGTTGAGCTTATCCTTGGTTGCAATGTTATCTTTTACAAGTACAGGGATGCCATGAAGTGGAGACAAAGATCTCAGTGAGCTTCTCTTGCGCTTGAGATCGGCTTGAGAGGCTTGGTTTAAAGCATCTGGATTCACTTCTATGATCCCTTTCAGGATGGGGTTTAATCTACGCACTTGTTCGAGGTAAAACTCAACGAGTTGCCTCGAGTGACTCTCGAATTCAGGTCGGATCCTTCTCAGAGGGGGTCGTTGACAGCGTAGATGCTGACGAATGGTGTTGCCGATTGGTCGAAGTTTGGGTGCGTCATTTGGACAGCGCTGGTTTTTTGCTGCTGAGAACGTTGAAAAGGAAGAAATGGAGATTTGTTAACTTCTCCTTTAATTGAACCCTCAAGGCAGATATATCGTCCTGAATTTCCATCTTTTTTATTTCTCTAAAACAGTATTATCATCAATACACTGATATTGGCTCTCGTCGACTTGGTTCTTGATTCTCATATTGCATCATTGAAGCCCATTGTTCTTGCAATTTGATTGTCTCGTCTAATTAGGAATGGTAATGAAATCTCGTTATGTATCACATTTGTAGTCTGGGTTAGGTTCCACTACAATTTATACTGAACTGGAAAGTAAATCACAACTTGGATTCAC

Coding sequence (CDS)

ATGGAGTCGCTGACTGATCGCCTATGGTTATGTTTGAACGCGCTACTTCGACGGCGCTGGGTTTTTTCCCGCTCAGGATGTCGAAAAGGAAAAAATGGAGATTGGTTACCTTCTCCTTTAACTGAACCCTTGGGACAGTTTTGGAGTAATACTCGGAACGCGCAGATACGGCGGAGAGGAGGAGGACGAGAACCCCCATCGCTATCTTGGGATCGAATTGGAGATGCAACTAGCTGTTTGAGGTATGCATTTAGGGATATTTTGAACTCAGCAAGCAATGCAGTCCGCTCTCCACTTGAACTTCCAGTGATTACATCAAACCTGTCGATCGTCAAATTGTCTACCAATATTGCTCCTCCTTGCCTTTCATGTTATTGA

Protein sequence

MESLTDRLWLCLNALLRRRWVFSRSGCRKGKNGDWLPSPLTEPLGQFWSNTRNAQIRRRGGGREPPSLSWDRIGDATSCLRYAFRDILNSASNAVRSPLELPVITSNLSIVKLSTNIAPPCLSCY

Homology

The following BLAST results are available for this feature:

BLAST of Cmc11g0287801.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0287801.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0287801.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc11g0287801.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0287801	Cmc11g0287801	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0287801.1-exon	Cmc11g0287801.1-exon-CMiso1.1chr11:2686951..2687715	exon
Cmc11g0287801.1-exon	Cmc11g0287801.1-exon-CMiso1.1chr11:2689378..2690148	exon
Cmc11g0287801.1-exon	Cmc11g0287801.1-exon-CMiso1.1chr11:2690417..2690866	exon
Cmc11g0287801.1-exon	Cmc11g0287801.1-exon-CMiso1.1chr11:2691352..2691794	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0287801.1-five_prime_utr	Cmc11g0287801.1-five_prime_utr-CMiso1.1chr11:2686951..2687506	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0287801.1-cds	Cmc11g0287801.1-cds-CMiso1.1chr11:2687507..2687715	CDS
Cmc11g0287801.1-cds	Cmc11g0287801.1-cds-CMiso1.1chr11:2689378..2689546	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0287801.1-three_prime_utr	Cmc11g0287801.1-three_prime_utr-CMiso1.1chr11:2689547..2690148	three_prime_UTR
Cmc11g0287801.1-three_prime_utr	Cmc11g0287801.1-three_prime_utr-CMiso1.1chr11:2690417..2690866	three_prime_UTR
Cmc11g0287801.1-three_prime_utr	Cmc11g0287801.1-three_prime_utr-CMiso1.1chr11:2691352..2691794	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0287801.1	Cmc11g0287801.1-protein	polypeptide