Cmc10g0280781.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc10g0280781.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr10: 18740156 .. 18740889 (-)
Sequence length517
RNA-Seq ExpressionCmc10g0280781.1
SyntenyCmc10g0280781.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACTTTCTTATAACACTATCACTTAAATTTAGGATTATTGTACCATAGGCATTTAACTCCATGTCTTCTCTTTGTCATCTTGTGAGTGTTGTTGGAAGTTCTGAAGGATCTAAAATGACTTTATGAGCCTTAGTTTTTGCCTTCCAAAGAGCAAAATCTTCCTTTCCATCGACCTTTTCAATTTCTACTCTTGCCACTACCATCCTCAGGTATGCTTCTGTTCTTTAATCCTTCAAGATTCAAATTCTTGAAATCAAGATTCGCTCTGATACCAATTTGTTGGACTTTTACTTTTATTACAAGCCCAAAGCAAATAGAGGACGGTTGGAGAGAAGACTTGGCATAGAAGAAAACATGCTTTTTAGCTTATGGTCGTACGCATGGCAAAATTTCTCTTTGCTTTTGCAAGACGAAAGGTAAAAAAACGAGAGAAAGAAAAGAAAAAATTGAAATGAAAAACCTTTATTTCTCTCTTTGTGTCTTTTCCTCTTATTCTGAAATCCATAATTTTTTATGGTGCTTTATTTATGTGTAGAGAGAACACACATATTGAAGATGAAGGAGAAGGAGAAGAAGAAGATGAACATACAAGATATATATGGTTCGGCCAAATAATGCCTACATTCATGGAAAGGGATCACTTTCTTGAAGAAATCTTGAGACGAATACAATTTGTTTTTTTCTCTCTCTTTTGTTTGTATGATGTAAAGAAAAGGTAAATTATTATTTTTGT

mRNA sequence

TTACTTTCTTATAACACTATCACTTAAATTTAGGATTATTGTACCATAGGCATTTAACTCCATGTCTTCTCTTTGTCATCTTGTGAGTGTTGTTGGAAGTTCTGAAGGATCTAAAATGACTTTATGAGCCTTAGTTTTTGCCTTCCAAAGAGCAAAATCTTCCTTTCCATCGACCTTTTCAATTTCTACTCTTGCCACTACCATCCTCAGCCCAAAGCAAATAGAGGACGGTTGGAGAGAAGACTTGGCATAGAAGAAAACATGCTTTTTAGCTTATGGTCGTACGCATGGCAAAATTTCTCTTTGCTTTTGCAAGACGAAAGAACACACATATTGAAGATGAAGGAGAAGGAGAAGAAGAAGATGAACATACAAGATATATATGGTTCGGCCAAATAATGCCTACATTCATGGAAAGGGATCACTTTCTTGAAGAAATCTTGAGACGAATACAATTTGTTTTTTTCTCTCTCTTTTGTTTGTATGATGTAAAGAAAAGGTAAATTATTATTTTTGT

Coding sequence (CDS)

ATGAGCCTTAGTTTTTGCCTTCCAAAGAGCAAAATCTTCCTTTCCATCGACCTTTTCAATTTCTACTCTTGCCACTACCATCCTCAGCCCAAAGCAAATAGAGGACGGTTGGAGAGAAGACTTGGCATAGAAGAAAACATGCTTTTTAGCTTATGGTCGTACGCATGGCAAAATTTCTCTTTGCTTTTGCAAGACGAAAGAACACACATATTGAAGATGAAGGAGAAGGAGAAGAAGAAGATGAACATACAAGATATATATGGTTCGGCCAAATAA

Protein sequence

MSLSFCLPKSKIFLSIDLFNFYSCHYHPQPKANRGRLERRLGIEENMLFSLWSYAWQNFSLLLQDERTHILKMKEKEKKKMNIQDIYGSAK
Homology
The following BLAST results are available for this feature:
BLAST of Cmc10g0280781.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0280781.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0280781.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0280781.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc10g0280781Cmc10g0280781gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0280781.1-exonCmc10g0280781.1-exon-CMiso1.1chr10:18740156..18740349exon
Cmc10g0280781.1-exonCmc10g0280781.1-exon-CMiso1.1chr10:18740473..18740585exon
Cmc10g0280781.1-exonCmc10g0280781.1-exon-CMiso1.1chr10:18740680..18740889exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0280781.1-three_prime_utrCmc10g0280781.1-three_prime_utr-CMiso1.1chr10:18740156..18740273three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0280781.1-cdsCmc10g0280781.1-cds-CMiso1.1chr10:18740274..18740349CDS
Cmc10g0280781.1-cdsCmc10g0280781.1-cds-CMiso1.1chr10:18740473..18740585CDS
Cmc10g0280781.1-cdsCmc10g0280781.1-cds-CMiso1.1chr10:18740680..18740766CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0280781.1-five_prime_utrCmc10g0280781.1-five_prime_utr-CMiso1.1chr10:18740767..18740889five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc10g0280781.1Cmc10g0280781.1-proteinpolypeptide