Cmc08g0231871.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTCTTATGTTGTTATTATGTGGTTTATTTTACTATTGGTTATTATTTAAGACAGAAGTCCAGCAGAAATTTTTTGGAATAGATTTATCTGGTCGGTCGGGACCGACCTAGATGACAATCTGGATAGAACTAGAAGATAGATCCTTTTCCAAATTGGATTCGAATTCATCACAAAAGTTTACGGACCAAAATTTTTACAAATTTGTGGAACTAAAGCAATTTTGGGCTGTTATTAGTTTCCGAAGTCCAAAAATCCCTTTTCCGATCAGGCAATTTCCTCTTAAGTTGAGTTGAAATTGCTATAAACTTTCCCAAATCTCTCTTTTGCTTGTGTGGGGTTTCTGTTTCCTTATCTGATTGAAGGATTTCACTGTTGAAATCAAGAATATGACAGAGAAGAATCCGTATCTGAATGGATCGGCCACTGTGCTGAACGAGAAGAACGACGAAACTGAGTGGGAGATGAGGCCCTGTGGCATGCTCGTCCAGAAGCGAGAAGATGATAATGACGCCGATGTTTCTACTACCGGCCCCATGATCGCCGTCAGTGTTACTCACGGTTATGGCCCTACTAAGTACAAGATTTTCCTTCCTGCTCAATCGACTTTTGGTACTATCTTTCTCTACTGATTTTCCTCTAATCTTCAATTGAATAGCTCTCGTTTTAACTTAGGGCTTTGTTTTGCTCTAATGAGTTCGAGGGATTTGATTTCTTGTATTGAGTGTTTTTAGGGTTTTAGTTCTTTTGTGGGTGAATTTTTTTTGTTTTTTGTTTTTTTTTAATTGAAACGAACTGATTTATCGTGTTTTTCCTGTTGTGGAGGGAAGATTTGATGTGGGTTTTGTTTGATTTGACGTGGGTTTTTATTTCTTTTCTTAGAGTTCGTGGAATGCTCTGATTTAATGGATGAGTTTGAGTTTGGGGGGGGGGGGGGGGCTATGGCTTCAACATATATGTTTGTTTGTATGAATATTGACTTTCTCAATGTCTTCTTTCATTTGTCTGGAACTGGGATTGGGGAGTTGGAAACTAACTTGTTTTGTTTGACATTGTTGTTTTGTTCTGTTTATGTGGATTGATGGTAAATGAACTTTCCCCATTCATGGTATCTGGGACGTGCGTACTTATAATGGAGTTTGGACTAGTTCCCATGTTGGTGATTTTGTGTGTGTTACTTCTTTTGCAGGCGATATGAAAAAGCATCTGGTGGCAATAACCGGTTTGCAGCTTGAAGAGCAGAGACTACTATTTCGAGGTAAGGAGAAGGATGATGATGAGCATTTGCATACCGCAGGGGTGAAGAATTTGTCAAAGATTTTACTCTTGGAGAACAAGACAAACAAGCAGAGGAAGGTCGTGGAAGATGTTAAGGTGGTAGAAGAGGTCGAGAGAAGTGGTGAGCTTTCAAAGGCATCAGCAGCCATTGCTGATGTTCGGTCTGAGGTTGATAAGCTTGCAGATAGGGTAAGTTTCCCTTGCAGTTTTTCAAAATACTTGATTTTGCTCTGTAATGGGATTCAATGCTGGTTTATATTTTGGGAGTGTGTTCATTATATTGTTATCTCTACAGGTTGCTGCCTTGCAAGTAGCTGTTAATGGTGGCACAAATGTTGAAGATAAAGAATTCGTAGTATCAACGGAGCTGCTGATGAGACAACTGTTGAAATTAGATAGCATTGATGCTGAAGGGGAAGCAAAGTTGCAGAGAAAAGCCGAGGTTAGTATTTAAACATTGATGGTGACACACAATTATACTGTCTTGTGTAACATTCATCTGACATCAAATAATCTCATGTTGAGTAAAAGAAAACAATTCTTAGAGGGACTTGAATCATTATGCTGATATTCGTATGTGACCAACCAATTTTCGTGTATGAGAGTATAGTTCTTCATCTTCTTTTAGCAATTTAAGTTACTGGATTTAGTTGTCTGATATCTTTTTTAAGGACGGCTGCTTTTGTGATATGTTCCATTGGTTGTTCAACTATGGCCTTGAGATTTTTGAGGCTATGTTATCGATTGGATACTAAGACCTTTTACATGATATTCTAGTGTTGCTTTTCTGTATCTACCTTCGGGGAGAATTTCTACCTATTAAAATTGAATTGGCAACTAGGAGTCTCCTAATAGTAAATTTGTACATTTAATAAAAAAGCTTGTTTGTCCATCATTGCTGCTGCTAATATGCGTTGTTAAATGTTTTGTCTAATCAAACAGCGGTCTTTTGTATTTATGAGTGAGCTTCACTCGATTAGGTCAGATTCTATTAAAAGCACATTTTTTCCTTGCAATCTGTTTTGAACTTTAAAGTGATCTCTAACATGTTCACACTTTTAACAAGTTCAGAATTTTACAACTCCAAATTTCATCAATGCATATGATAATCCTTCAAAAATTATTTAGCATCAATTATAAACAAATAGCTTTGAACAGGTACGCCGCATTCAGAACTTCGTGGACACACTCGATGCATTGAAGGCAAAAAGCTCTAAACCAATCAGCAACAATCACAGCACTGTTTCAGTGACGACTGAATGGGAGACCTTTGACTCAGGAGTCGGTAGCCTAACTCCCCCATCCCCTGCTCCGTCTTCTACAAGAGTAACTCAGGATTGGGAACGGTTTGATTAGCTCAACCAAAAGGCAAAAACACCTCACGAGTTTCATTTATTTAAACTCTACTAGTTGTTTATTAGTCAGTCATAAAGAACATCAAACATCCTCCCCCTTCCCCAACCCCGACCCCATCTTAGATTAATAATTTTTTAAATTAATCATACGGTTGTCAGCCCATGAGCCTTGTAGGCATGACAAAAGCTATCATTTCTTTAGAAATTGAGTTATTGTTTCAATATTAAGTTATATATTTAATGAATGGAAACAGATTTGAGCACAATGAAATGACTGGAATCATACTCTGGATTTTGTTTTGTTTATCTCACTCTTTTACACAGATTTGAAATCTCATAGCACAGGCAAAGAGACCAAAAACCTTGGCCCTGCTATCATGTACACATTGTCC TATTCTTATGTTGTTATTATGTGGTTTATTTTACTATTGGTTATTATTTAAGACAGAAGTCCAGCAGAAATTTTTTGGAATAGATTTATCTGGTCGGTCGGGACCGACCTAGATGACAATCTGGATAGAACTAGAAGATAGATCCTTTTCCAAATTGGATTCGAATTCATCACAAAAGTTTACGGACCAAAATTTTTACAAATTTGTGGAACTAAAGCAATTTTGGGCTGTTATTAGTTTCCGAAGTCCAAAAATCCCTTTTCCGATCAGGCAATTTCCTCTTAAGTTGAGTTGAAATTGCTATAAACTTTCCCAAATCTCTCTTTTGCTTGTGTGGGGTTTCTGTTTCCTTATCTGATTGAAGGATTTCACTGTTGAAATCAAGAATATGACAGAGAAGAATCCGTATCTGAATGGATCGGCCACTGTGCTGAACGAGAAGAACGACGAAACTGAGTGGGAGATGAGGCCCTGTGGCATGCTCGTCCAGAAGCGAGAAGATGATAATGACGCCGATGTTTCTACTACCGGCCCCATGATCGCCGTCAGTGTTACTCACGGTTATGGCCCTACTAAGTACAAGATTTTCCTTCCTGCTCAATCGACTTTTGGCGATATGAAAAAGCATCTGGTGGCAATAACCGGTTTGCAGCTTGAAGAGCAGAGACTACTATTTCGAGGTAAGGAGAAGGATGATGATGAGCATTTGCATACCGCAGGGGTGAAGAATTTGTCAAAGATTTTACTCTTGGAGAACAAGACAAACAAGCAGAGGAAGGTCGTGGAAGATGTTAAGGTGGTAGAAGAGGTCGAGAGAAGTGGTGAGCTTTCAAAGGCATCAGCAGCCATTGCTGATGTTCGGTCTGAGGTTGATAAGCTTGCAGATAGGGTTGCTGCCTTGCAAGTAGCTGTTAATGGTGGCACAAATGTTGAAGATAAAGAATTCGTAGTATCAACGGAGCTGCTGATGAGACAACTGTTGAAATTAGATAGCATTGATGCTGAAGGGGAAGCAAAGTTGCAGAGAAAAGCCGAGGTACGCCGCATTCAGAACTTCGTGGACACACTCGATGCATTGAAGGCAAAAAGCTCTAAACCAATCAGCAACAATCACAGCACTGTTTCAGTGACGACTGAATGGGAGACCTTTGACTCAGGAGTCGGTAGCCTAACTCCCCCATCCCCTGCTCCGTCTTCTACAAGAGTAACTCAGGATTGGGAACGGTTTGATTAGCTCAACCAAAAGGCAAAAACACCTCACGAGTTTCATTTATTTAAACTCTACTAGTTGTTTATTAGTCAGTCATAAAGAACATCAAACATCCTCCCCCTTCCCCAACCCCGACCCCATCTTAGATTAATAATTTTTTAAATTAATCATACGGTTGTCAGCCCATGAGCCTTGTAGGCATGACAAAAGCTATCATTTCTTTAGAAATTGAGTTATTGTTTCAATATTAAGTTATATATTTAATGAATGGAAACAGATTTGAGCACAATGAAATGACTGGAATCATACTCTGGATTTTGTTTTGTTTATCTCACTCTTTTACACAGATTTGAAATCTCATAGCACAGGCAAAGAGACCAAAAACCTTGGCCCTGCTATCATGTACACATTGTCC ATGACAGAGAAGAATCCGTATCTGAATGGATCGGCCACTGTGCTGAACGAGAAGAACGACGAAACTGAGTGGGAGATGAGGCCCTGTGGCATGCTCGTCCAGAAGCGAGAAGATGATAATGACGCCGATGTTTCTACTACCGGCCCCATGATCGCCGTCAGTGTTACTCACGGTTATGGCCCTACTAAGTACAAGATTTTCCTTCCTGCTCAATCGACTTTTGGCGATATGAAAAAGCATCTGGTGGCAATAACCGGTTTGCAGCTTGAAGAGCAGAGACTACTATTTCGAGGTAAGGAGAAGGATGATGATGAGCATTTGCATACCGCAGGGGTGAAGAATTTGTCAAAGATTTTACTCTTGGAGAACAAGACAAACAAGCAGAGGAAGGTCGTGGAAGATGTTAAGGTGGTAGAAGAGGTCGAGAGAAGTGGTGAGCTTTCAAAGGCATCAGCAGCCATTGCTGATGTTCGGTCTGAGGTTGATAAGCTTGCAGATAGGGTTGCTGCCTTGCAAGTAGCTGTTAATGGTGGCACAAATGTTGAAGATAAAGAATTCGTAGTATCAACGGAGCTGCTGATGAGACAACTGTTGAAATTAGATAGCATTGATGCTGAAGGGGAAGCAAAGTTGCAGAGAAAAGCCGAGGTACGCCGCATTCAGAACTTCGTGGACACACTCGATGCATTGAAGGCAAAAAGCTCTAAACCAATCAGCAACAATCACAGCACTGTTTCAGTGACGACTGAATGGGAGACCTTTGACTCAGGAGTCGGTAGCCTAACTCCCCCATCCCCTGCTCCGTCTTCTACAAGAGTAACTCAGGATTGGGAACGGTTTGATTAG MTEKNPYLNGSATVLNEKNDETEWEMRPCGMLVQKREDDNDADVSTTGPMIAVSVTHGYGPTKYKIFLPAQSTFGDMKKHLVAITGLQLEEQRLLFRGKEKDDDEHLHTAGVKNLSKILLLENKTNKQRKVVEDVKVVEEVERSGELSKASAAIADVRSEVDKLADRVAALQVAVNGGTNVEDKEFVVSTELLMRQLLKLDSIDAEGEAKLQRKAEVRRIQNFVDTLDALKAKSSKPISNNHSTVSVTTEWETFDSGVGSLTPPSPAPSSTRVTQDWERFD Homology
BLAST of Cmc08g0231871.1 vs. NCBI nr
Match: KAA0037735.1 (BAG family molecular chaperone regulator 4 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. NCBI nr
Match: TYK10926.1 (BAG family molecular chaperone regulator 4 [Cucumis melo var. makuwa]) HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149 Identity = 280/281 (99.64%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. NCBI nr
Match: XP_004148610.2 (BAG family molecular chaperone regulator 4 [Cucumis sativus] >KGN54396.1 hypothetical protein Csa_018133 [Cucumis sativus]) HSP 1 Score: 521.9 bits (1343), Expect = 3.3e-144 Identity = 271/281 (96.44%), Postives = 274/281 (97.51%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. NCBI nr
Match: XP_038880887.1 (BAG family molecular chaperone regulator 4 [Benincasa hispida]) HSP 1 Score: 481.5 bits (1238), Expect = 5.0e-132 Identity = 253/282 (89.72%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. NCBI nr
Match: XP_023544623.1 (BAG family molecular chaperone regulator 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 442.2 bits (1136), Expect = 3.4e-120 Identity = 232/281 (82.56%), Postives = 254/281 (90.39%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy Swiss-Prot
Match: Q8RX71 (BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana OX=3702 GN=BAG4 PE=1 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.3e-63 Identity = 135/276 (48.91%), Postives = 185/276 (67.03%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy Swiss-Prot
Match: Q0WUQ1 (BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.7e-37 Identity = 91/226 (40.27%), Postives = 144/226 (63.72%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy Swiss-Prot
Match: Q9LYP4 (BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.5e-33 Identity = 87/234 (37.18%), Postives = 141/234 (60.26%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy Swiss-Prot
Match: Q0WPX7 (BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana OX=3702 GN=BAG2 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.0e-31 Identity = 93/288 (32.29%), Postives = 157/288 (54.51%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy Swiss-Prot
Match: O60125 (BAG family molecular chaperone regulator 1A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bag101 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07 Identity = 51/183 (27.87%), Postives = 95/183 (51.91%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy TrEMBL
Match: A0A5A7T8E5 (BAG family molecular chaperone regulator 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00310 PE=4 SV=1) HSP 1 Score: 542.7 bits (1397), Expect = 8.8e-151 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy TrEMBL
Match: A0A5D3CKG8 (BAG family molecular chaperone regulator 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00050 PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 5.7e-150 Identity = 280/281 (99.64%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy TrEMBL
Match: A0A0A0L2P6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312290 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.6e-144 Identity = 271/281 (96.44%), Postives = 274/281 (97.51%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy TrEMBL
Match: A0A6J1CSC1 (BAG family molecular chaperone regulator 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013843 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 4.7e-120 Identity = 236/289 (81.66%), Postives = 258/289 (89.27%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. ExPASy TrEMBL
Match: A0A6J1ITL4 (BAG family molecular chaperone regulator 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478292 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 8.9e-119 Identity = 229/281 (81.49%), Postives = 253/281 (90.04%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. TAIR 10
Match: AT3G51780.1 (BCL-2-associated athanogene 4 ) HSP 1 Score: 243.8 bits (621), Expect = 1.6e-64 Identity = 135/276 (48.91%), Postives = 185/276 (67.03%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. TAIR 10
Match: AT5G52060.1 (BCL-2-associated athanogene 1 ) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-38 Identity = 91/226 (40.27%), Postives = 144/226 (63.72%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. TAIR 10
Match: AT5G07220.1 (BCL-2-associated athanogene 3 ) HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34 Identity = 87/234 (37.18%), Postives = 141/234 (60.26%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. TAIR 10
Match: AT5G62100.2 (BCL-2-associated athanogene 2 ) HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32 Identity = 93/288 (32.29%), Postives = 157/288 (54.51%), Query Frame = 0
BLAST of Cmc08g0231871.1 vs. TAIR 10
Match: AT5G62100.1 (BCL-2-associated athanogene 2 ) HSP 1 Score: 128.6 bits (322), Expect = 7.7e-30 Identity = 93/299 (31.10%), Postives = 157/299 (52.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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