Cmc08g0217811.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc08g0217811.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr08: 6371946 .. 6373887 (+)
Sequence length	1942
RNA-Seq Expression	Cmc08g0217811.1
Synteny	Cmc08g0217811.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATAGTTTATGAAAATGCCTAATAATATACATAATTAAACATTATTAAAACTATTACATACTACACAACAGCAAATTTGGAGTCCCCTGCTTCTAATAAATGCAGCCCAAGCACTTATTTACAACAGCCACACCAAGATTCATAAATCACTAATTAGACCTTGACACCCACAATACAAACTCTAACCCTGAATAGCTATGAACAGAGTATACAACAAAGAGAATGCAAAACTGTTAAGTTACGAATGGTAATTTGTAAATGAAATCTCAGTTCATAGAGTACCTTATTGATTATCAGCTGCATCTTCTTCAATTTGAGTTACCTCCAAATTAAGCCAAATTGGGGGAGGCCGAAAAATTGGTGCATTATCATTTGAAGAAGCTTTCAGAATCCTTTTGTCTTCAAGCTCAAATACATGAGTGTTATAACCAAGAGCACACTTTGGTGTATGGGTAAAATAAATGCAACTCCCTTTAAGTCCTTCAAAATTTGGAGTTGAAACTGAAAAACAACAATCGTTTCCCAGAATAAAGGATTGATTCCCCAAATTTTTTACCTCAACCCATCTTCCCCACTCTTGATCAAGCCTATGAAGTTTGAAATCAATTACTTTAGGAGGGGAATCTTCAATGAGATTATTCAACCAATGAATATGGAAGATATCAGCATTCCATAACAATGGTTCCTTATCCAGAAATCGATCAACAACATAGAGTTCACCGTTACATTCAACCAAATGCTTTTGATTACCAAAACCACATAATGGAGGAGAAAACTGTACCAATCTCATGGATGAATCAATCCAGAAAACTGTTCCCCATCGATCAACTGCATAGAATTGCCCTTTGTACACAATCACATCGTCGTAGTGGAAATTACGGTGGTCGATCAGCGTCCATTTGTCGTCTCCATGTTTAGCAAACCCTAATTTTCCACCGGCGTAAACTGCTAAAATCGTGCATTTCTTAACATCAATCCATGGGGAATCAGGGAACATTACAACCTTAGTAATTCGAGGAACAGGAGAACCATTAGTATAACCAAGAGTATAAGATTTAGCTACTTCGTAAATTCCAAAATCCAGTAAGTTCACTTCCTTCCGAAATAGATCGGAGTTGCATTTAGCATAGCGTGTTGAAAGCGGGTGGAGAAAACGCATTTTACCTAATTTTGTACTCTCGACCTTCGCTAACCAGCCTTCTGCAGCACAATAAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGCAAAACTGAAAGTTTTATGATGATCGAGAGGACTGAGGCGGTAGATTATTCTTCGGATAAGGAAGGCGTCTGTGAGATGATCGGCGGCGAAGACTGGAGAAGGGAGATCGAGAGGTAAAAGAGGAGAAACGGCGTTGAAAGGAGGTAGAGAAGCACGCCAAGATCGGCAGACACTGCGAAATCGGAGGACGTCGATGTAGGTATCGAGGCGTTTGCCGATGATTGGCCAAAGTTCAGGAGGAAGATCGGACCACCGTACACGGCTGTCTTCCATGGCGGAAGTTTGACTTGAATCCGATTGGTCCAACAGAAAGACGATGAGGAGAAGATTATCTGTGGATTGGGTTGACCGATGCTATGACTCTTACAGAAACCAATTTGATGATATAAATAATAAATATGTTTACAATACAGTTTTTATTATATCATATATCCGATGTCCTATTGGAGCAACTTTTAATCTTCACTTTTATCTAATCTTCATCCATCTTAAATTTAGTTTACTATTCTTAGATTTTGTATCGGTAAACATCAATAACCCATTTGTGAAAATTCTAAACTGATATTAAATATCATTATTTGTTTCATCTCATTTTATGTTTTGCTTGTTTCACCTAATATTAAGGTTGGAGGTTCAAGCTATATGTAAGTATCTTGTTACTAAATCTAAAGGTATTAAAAGTAGAATTTGAT

mRNA sequence

GCATAGTTTATGAAAATGCCTAATAATATACATAATTAAACATTATTAAAACTATTACATACTACACAACAGCAAATTTGGAGTCCCCTGCTTCTAATAAATGCAGCCCAAGCACTTATTTACAACAGCCACACCAAGATTCATAAATCACTAATTAGACCTTGACACCCACAATACAAACTCTAACCCTGAATAGCTATGAACAGAGTATACAACAAAGAGAATGCAAAACTGTTAAGTTACGAATGGTAATTTGTAAATGAAATCTCAGTTCATAGAGTACCTTATTGATTATCAGCTGCATCTTCTTCAATTTGAGTTACCTCCAAATTAAGCCAAATTGGGGGAGGCCGAAAAATTGGTGCATTATCATTTGAAGAAGCTTTCAGAATCCTTTTGTCTTCAAGCTCAAATACATGAGTGTTATAACCAAGAGCACACTTTGGTGTATGGGTAAAATAAATGCAACTCCCTTTAAGTCCTTCAAAATTTGGAGTTGAAACTGAAAAACAACAATCGTTTCCCAGAATAAAGGATTGATTCCCCAAATTTTTTACCTCAACCCATCTTCCCCACTCTTGATCAAGCCTATGAAGTTTGAAATCAATTACTTTAGGAGGGGAATCTTCAATGAGATTATTCAACCAATGAATATGGAAGATATCAGCATTCCATAACAATGGTTCCTTATCCAGAAATCGATCAACAACATAGAGTTCACCGTTACATTCAACCAAATGCTTTTGATTACCAAAACCACATAATGGAGGAGAAAACTGTACCAATCTCATGGATGAATCAATCCAGAAAACTGTTCCCCATCGATCAACTGCATAGAATTGCCCTTTGTACACAATCACATCGTCGTAGTGGAAATTACGGTGGTCGATCAGCGTCCATTTGTCGTCTCCATGTTTAGCAAACCCTAATTTTCCACCGGCGTAAACTGCTAAAATCGTGCATTTCTTAACATCAATCCATGGGGAATCAGGGAACATTACAACCTTAGTAATTCGAGGAACAGGAGAACCATTAGTATAACCAAGAGTATAAGATTTAGCTACTTCGTAAATTCCAAAATCCAGTAAGTTCACTTCCTTCCGAAATAGATCGGAGTTGCATTTAGCATAGCGTGTTGAAAGCGGGTGGAGAAAACGCATTTTACCTAATTTTGTACTCTCGACCTTCGCTAACCAGCCTTCTGCAGCACAATAAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGCAAAACTGAAAGTTTTATGATGATCGAGAGGACTGAGGCGGTAGATTATTCTTCGGATAAGGAAGGCGTCTGTGAGATGATCGGCGGCGAAGACTGGAGAAGGGAGATCGAGAGGTAAAAGAGGAGAAACGGCGTTGAAAGGAGGTAGAGAAGCACGCCAAGATCGGCAGACACTGCGAAATCGGAGGACGTCGATGTAGGTATCGAGGCGTTTGCCGATGATTGGCCAAAGTTCAGGAGGAAGATCGGACCACCGTACACGGCTGTCTTCCATGGCGGAAGTTTGACTTGAATCCGATTGGTCCAACAGAAAGACGATGAGGAGAAGATTATCTGTGGATTGGGTTGACCGATGCTATGACTCTTACAGAAACCAATTTGATGATATAAATAATAAATATGTTTACAATACAGTTTTTATTATATCATATATCCGATGTCCTATTGGAGCAACTTTTAATCTTCACTTTTATCTAATCTTCATCCATCTTAAATTTAGTTTACTATTCTTAGATTTTGTATCGGTAAACATCAATAACCCATTTGTGAAAATTCTAAACTGATATTAAATATCATTATTTGTTTCATCTCATTTTATGTTTTGCTTGTTTCACCTAATATTAAGGTTGGAGGTTCAAGCTATATGTAAGTATCTTGTTACTAAATCTAAAGGTATTAAAAGTAGAATTTGAT

Coding sequence (CDS)

ATGGTTCCTTATCCAGAAATCGATCAACAACATAGAGTTCACCGTTACATTCAACCAAATGCTTTTGATTACCAAAACCACATAATGGAGGAGAAAACTGTACCAATCTCATGGATGAATCAATCCAGAAAACTGTTCCCCATCGATCAACTGCATAGAATTGCCCTTTGTACACAATCACATCGTCGTAGTGGAAATTACGGTGGTCGATCAGCGTCCATTTGTCGTCTCCATGTTTAG

Protein sequence

MVPYPEIDQQHRVHRYIQPNAFDYQNHIMEEKTVPISWMNQSRKLFPIDQLHRIALCTQSHRRSGNYGGRSASICRLHV

Homology

The following BLAST results are available for this feature:

BLAST of Cmc08g0217811.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc08g0217811.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc08g0217811.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc08g0217811.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc08g0217811	Cmc08g0217811	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0217811.1-exon	Cmc08g0217811.1-exon-CMiso1.1chr08:6371946..6373887	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0217811.1-five_prime_utr	Cmc08g0217811.1-five_prime_utr-CMiso1.1chr08:6371946..6372624	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0217811.1-cds	Cmc08g0217811.1-cds-CMiso1.1chr08:6372625..6372864	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0217811.1-three_prime_utr	Cmc08g0217811.1-three_prime_utr-CMiso1.1chr08:6372865..6373887	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc08g0217811.1	Cmc08g0217811.1-protein	polypeptide