Cmc08g0214351.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc08g0214351.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 4519927 .. 4523834 (-)
Sequence length896
RNA-Seq ExpressionCmc08g0214351.1
SyntenyCmc08g0214351.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAACGAAACCCCAAAAAACGATGCTTTTTTTTTTTTTCCTTTCCCCAAACTCGCTCGAATTTGGCCTATAAATTGCATGTGAAATCCATGAAAATGATGATCTCCCCATCTATATGTTTTATAAAAAGAAAAGGAAGAAAGAAAAAAACCCATTTTGATTTAATCGATAAAAACGCGTTTGAAGAACAGAAGAGAAATGTGAAAAGGGCCCTTCACCAGCCACATCGACCTCCATGCCTTTTCTTTTGTCTATATAAATCAAAGTTTTCTTTTCTTTTCTGTTCTTTTCTTTTGTTCTGTAGATGGATGGAGATCAATATAATCAGGTTGGTTCATCACTCAAACAAACAAAAAAAAAAAAATCTCTATTATTATTGTTGTTGTTGTATATATGAGTTTATCTGGTCTTAATCTCCCTCCCATCTTGTTTGAATGATATCATTTGGTTTCAAAATTTAGATATAGAGCCCACTTTTGTAAAAATCGAAAGAGGGTCGAAGAAATTACAAGAGTGCAAATGTGAAACCTTGAGATCTTTCTTGTGGAATTAGAGCAAAATTTTTGGCAGACAGGGCCAAGCCAGGCAGTACAAATGGAAGCTACTACTACTACAACAACAACAACAAAAAAAAAAGTTCTTGATTCAAAGATTCAAGCCATTCTTGCTGATGATCTTAGAAGAATCTGTATGAGTTTTTCTTCTTCTTCTTCTTCTAATTTGGTAATTTAATTTCTTCGAACTTTAATTAATTGTTGGATTATATAATTCATATATATTTATATCGTATATTGATGAAATGTTGTTGGGAATTAGATATTAGATGATAGCGTAGAGAGAGGAGAAAGGGAAAAATTTTCTTTTTTTCTTTTTTGGAATATGAATAATTGGTTTTTTTATTATTATTTTTTAAATTAGGATCAATACCCACAAGACAAATTCTTTTGTTTGCGTGGATTATGATCCAAGCAAGAAAGAAAAAAAAAACACATAAGTAATTAAGTTTCAATTCTGAGTATATAGTTCTCTTTTTTGGTATTTTGCTAAGCTGTAAGGCTTTTTCTTTTTGAAGGATGAAATGAATAAATTGGAACAAAGAGCATTGGATTGTCAGAGAAAAGGAACCAAATTTTAATTTGCATCCAAAGTTTGAGGCTCTAATGTTTTCTAAACCACATTTTTGTTTATGTCGAATATTCTGCTTTCCTTCTTTATATTACTTATTTCTCAACAAATTAAAAATTTAAAAACACCCTTTAAAAACTTTAAATAATTAATTACAAAGCTTGTGCGTAAATTTTAAAATAGTATTAGACTAAAAATGAAGAATTCACGATTTGCTTTATATATCCTAATTGACAATAAGATTCATTTTCTAAACAACAAAGATTCAAATCTCAAATTTTTTTATTTGTTTAACGTACCTTTCATATTTAAGTCTAATCTAACATTTAACGAAACCAAGAGTCTTATTGAAATAAGAAAACAAAACTTTTAAATTTATGTATATGTGATTTCTCAACCACCATATCCAAGATATCATAGTGGATGTCACATGCTTTAGGATTTTTATGAATTTAAGGCTAAACATATAATATTAGTAATAATGATGTTTTTAGTTAAATCGTTTGCTTTTAATACAGCCTCTCTTCCAAGAGAAAATAATACACACGAAAGAGTAATTTCCATTTCCAAATTCGTTTATATGGGAAAGGATAATTATAATTAAATTAAACTGCCTTTGTTAATTTCATTTTTTTTTCCTTGTTTGGGTTATAACGTTTATAAGAAATGGCCATAGTTTTACACGTGTAAAGAAATGTGTTGAACTTAATTAGGAAATGGACATGGTTTCTTGTTAATTAATAGTTAAATGCACCTGTGAATGTTGATAAACTTAGTTAATAAACATCTATCATGTAGTTTTTAAATATAATCTACCTTTTCTTTGTTTTATTATTAATTTTTTATTTTGTGTTTTGAGTTTAGGTTTTAATTGGTTTAATTTGTATAGTATTTCGCCCTTCTTCTTTTCATCTTTTGCGCTAATTAATGTCTATTTTGATATTTATAGGTTAATTTTCAGTTGATTAATTAAAGTAAGCAATGAAGAGAGAAATTTTAATTTTAATTTGAATAATTTGGTGACAAAACATAGAGGCTATTGATAAAGACGGCTCATCTTTGTGTTTCGATATGTGACGTTATTCTTTTAAATTTAGTGTGCTTATATATAGTAGGACTTCAATAAATTAAATTCAATTTGGTTCTAGCTATTTGATTGTTAAGGTCCATCAATAAATGAGTCATTTTAAAATTATAAAATACTACGTAATTAAAAATATAACTTTATATTTGTAGTACCTATAATATAATCATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATATTATAGTTTAATACATAATCTTAACAAAGTAACCTAATAGTTTAATACATAATCTTAGCTAGCTATATTCAAATTAGTTTTGAACATGTAGATTTAAGTATGCGACTCAAACAAAGTACGTTTCTTTATTCATTTTATCAAATTTTATATTTTTCTTACGATTTTCATTATCAAACACTCATTCAGTACAACCATTTATCATATTCATGTCAACTTTAAGGGTTCGCATGATCTTCCTTTATCTTTTTCCTGGTTAGTTACATTGGACACCATAGAAAAATATACATACCTCATACAACTGATATGTTATTTATTACAGAGTAAAATATATATATATATATATATATATATGAACTATGTTTTTTTTAAGATAGATACGATATAAATTACTATCATATTGGTTATATGTTAAATTATGTTATATTTTATTTAATGTCTTTTTTTATTTAATTTGAATTTCCTTACTTTTAATAAAATTTAAATTTTAGTCTTTACCATTAGTTTCTAATTGATTTTGTCTGGGAGATAAAAAGAGTGTTTTTAGTTTTATTTTTCCAAAAAAAAATGTAATCTTTACCAGCAATACTTTACAAATTGCAAAAGTATTTTTATATGGGATATTTTCTTACTTGAAAATTATAACCTAACATGCTCTCCGAAACAAACTAAATTATATAGCACAACAATAAAAATATTTGTAAAAATAATAATAGTTGACTAGTCAAATGGTGAAAAGTTTTAAAAGATGAAGTTTGTCCTTTAGCGACCGTCATCAATTATCAATTAAGTGATAATTGCTGTCAATTACAATAATTGACGGTACGTTTCTCAAATTGAAATTGTCACCGATAACATCTATTAGTGATAATAGTTATTTTCAATGATAACCTTCAATTTATCATAATTATGATTGTTTCTTATGGTTTTTTAAAATTGAAAGTCATAATTCATAGCAACTATCAATGATAACTTTCAACAAGAGAAAAAAAAATGTAAGTCTATTAGCAATTAGTTTTAGTTTGAAAATTTTGAAAAGAAGTGTTCAAAATAGTGATTGGACCCGGGTCTTTTAGTATTTTACTATACATGTGTCTTATAAACAATTATTTTATTGTTGTACTAGATATTCTATTACTTTTTACTTTAAGTTTTACTTATGCAGGTGACCCTTGGAACTACACCATCAAAACTTGAAATAACTTAACCAAAAAGTGACAACACTGTCTTCATTTTCTTTCATTCCGGCTTCTAAATATTGTCCCCTCACATGTTTATCATTTCTAGGCCTTTGCAATATACACACAAATAGTATATATTCTCTTTGCCCAATCTTATACTAAGGCTAATTCACTTGACTTACAATTTGATTTTTTAAACTCTAAAATTGTTGCACAAGAAAACATATATTCTCTCACACATTGATAACATTTTCTAGTTTGCTTTTTTTTTTTTTTAATTTTATTTTCCT

mRNA sequence

TTAAACGAAACCCCAAAAAACGATGCTTTTTTTTTTTTTCCTTTCCCCAAACTCGCTCGAATTTGGCCTATAAATTGCATGTGAAATCCATGAAAATGATGATCTCCCCATCTATATGTTTTATAAAAAGAAAAGGAAGAAAGAAAAAAACCCATTTTGATTTAATCGATAAAAACGCGTTTGAAGAACAGAAGAGAAATGTGAAAAGGGCCCTTCACCAGCCACATCGACCTCCATGCCTTTTCTTTTGTCTATATAAATCAAAGTTTTCTTTTCTTTTCTGTTCTTTTCTTTTGTTCTGTAGATGGATGGAGATCAATATAATCAGATATAGAGCCCACTTTTGTAAAAATCGAAAGAGGGTCGAAGAAATTACAAGAGTGCAAATGTGAAACCTTGAGATCTTTCTTGTGGAATTAGAGCAAAATTTTTGGCAGACAGGGCCAAGCCAGGCAGTACAAATGGAAGCTACTACTACTACAACAACAACAACAAAAAAAAAAGTTCTTGATTCAAAGATTCAAGCCATTCTTGCTGATGATCTTAGAAGAATCTGTATGAGTTTTTCTTCTTCTTCTTCTTCTAATTTGGTGACCCTTGGAACTACACCATCAAAACTTGAAATAACTTAACCAAAAAGTGACAACACTGTCTTCATTTTCTTTCATTCCGGCTTCTAAATATTGTCCCCTCACATGTTTATCATTTCTAGGCCTTTGCAATATACACACAAATAGTATATATTCTCTTTGCCCAATCTTATACTAAGGCTAATTCACTTGACTTACAATTTGATTTTTTAAACTCTAAAATTGTTGCACAAGAAAACATATATTCTCTCACACATTGATAACATTTTCTAGTTTGCTTTTTTTTTTTTTTAATTTTATTTTCCT

Coding sequence (CDS)

ATGAAAATGATGATCTCCCCATCTATATGTTTTATAAAAAGAAAAGGAAGAAAGAAAAAAACCCATTTTGATTTAATCGATAAAAACGCGTTTGAAGAACAGAAGAGAAATGTGAAAAGGGCCCTTCACCAGCCACATCGACCTCCATGCCTTTTCTTTTGTCTATATAAATCAAAGTTTTCTTTTCTTTTCTGTTCTTTTCTTTTGTTCTGTAGATGGATGGAGATCAATATAATCAGATATAGAGCCCACTTTTGTAAAAATCGAAAGAGGGTCGAAGAAATTACAAGAGTGCAAATGTGA

Protein sequence

MKMMISPSICFIKRKGRKKKTHFDLIDKNAFEEQKRNVKRALHQPHRPPCLFFCLYKSKFSFLFCSFLLFCRWMEINIIRYRAHFCKNRKRVEEITRVQM
Homology
The following BLAST results are available for this feature:
BLAST of Cmc08g0214351.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0214351.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0214351.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0214351.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc08g0214351Cmc08g0214351gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0214351.1-exonCmc08g0214351.1-exon-CMiso1.1chr08:4519927..4520232exon
Cmc08g0214351.1-exonCmc08g0214351.1-exon-CMiso1.1chr08:4523112..4523373exon
Cmc08g0214351.1-exonCmc08g0214351.1-exon-CMiso1.1chr08:4523507..4523834exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0214351.1-three_prime_utrCmc08g0214351.1-three_prime_utr-CMiso1.1chr08:4519927..4520232three_prime_UTR
Cmc08g0214351.1-three_prime_utrCmc08g0214351.1-three_prime_utr-CMiso1.1chr08:4523112..4523309three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0214351.1-cdsCmc08g0214351.1-cds-CMiso1.1chr08:4523310..4523373CDS
Cmc08g0214351.1-cdsCmc08g0214351.1-cds-CMiso1.1chr08:4523507..4523745CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0214351.1-five_prime_utrCmc08g0214351.1-five_prime_utr-CMiso1.1chr08:4523746..4523834five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc08g0214351.1Cmc08g0214351.1-proteinpolypeptide