Cmc08g0209061.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc08g0209061.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 1507289 .. 1511105 (-)
Sequence length1151
RNA-Seq ExpressionCmc08g0209061.1
SyntenyCmc08g0209061.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGCTTCTTACTGAATGCTAAGAACAACACCGCTTGTAACGGTCTGAGTATCTCCGTCAGCTCATTCAGCGTACGGATCCTCAATTTGTCGGCTTGTTGGATGAGTCTCACCATTTCCCCATCTTGCTTTTCCAAAGCCCTTTCCAATTCCTCAATCCCGATTTGCTCCTTCATTGATCTCATCGCAATTCCCACCACCGTCTGATCCGCCATCTCCTCCTGAACCCTCGCCAGCTCCGACGTCAGTCTCTCCTCTTCCTTTATCGTTCTCATCTGCAGACTGTCCAGCTGCTCCATTTGCTGCGGCGTCAACTCTCCAGCTATGTCCTCCATCGACTTCATCCCCTGAAGAAATTGCGCCATTCTGGTTTCCAGTTCGTACCCGGTGAGGGAATAGGCTAAACGGATGAAAACAGTGGGTCGGCAACCGGCGATCCAGAGGAGTGAAGCTTCTCTTGTGCTACACCAAACAGGGGCGAAGAATAGCGACACGTCGTTTTTGGCTAGCTGCATTCGTCGATCAATGTAGTCTTGGAATTCCTCGATGCTCTTGTCTACAAGCTGGGTGAGTTGGCGCTCTGCTTCTTCATGGTTTGAATTTACTCTGTTTTCGATGGCGCTAAGAGCTTGGAAAAGCTCCTTCTGGCTGTCCTCTTGAAGCTTCATCCACTCCAGAAAACACCGCTCCGATGCAGCTTGGTCGCTGGTACTTCCCTTTTCCGCCATCTAACTTTTTTTTTACCAATCTTAATCAGCTTCTCCATCTCTATATATACATATATAAATACAATACAACATTGCAAATTGTATAAAACGACAAAACATGGCATAAGTTCAAAGTTTGAGAAACTGAGTGTTGTGTGTTTTTTTCTTTTTTGTTCTTATTTTGAGACGAAATTAAAAGTAATAATAATTCCAACCTTATCTATATCTATCCGACATTTGAATTAAAATTTGTATAGAATTGAAGTAGAATTAAGAAGAGAACATATAGAGAGCTTACGTGTCGCCGTCTAGGGAAACAGAGGAGAGTGTGTAGTGGAGACTGGAGAGATCTAATGATACATTAAAACACACAAACAAACACACACACACACACACACACACACACACACACACACACACACACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAAGAACTACATTAACAAATCCAGTGGTTTGGTATTGTCATAGCTCTGATTTATGGTGTGCTCTAAAAGGGAAAATTAAACAAATAAGAGAGTGAGAGAGAGATAGAGTGGACCTTTGATTTGGTGCAACAGTCGAATGGGTACGACGTTTAGGAAGTCAAGGAGGCGTATTCGAAGTCGGAGAAATTTTTATTGCTTCTTCACTGTCCACTGTTTCATTCCATGAATATGTCCCAACAAATGCACACCACAGTGATACAATATACCCTTAATTTCATCACCATTTTTCTTCTTTTCTCTAGATTTATGCCAACTTGCAAGTTCGAACAACACCCAACTTGATTTTGCTACATCCTCCCCTTTTTTAATTTCTAAAAAAACGTAAATTGGCCTTGTTAAATTTTTAAACAATCTAGTATATGTATTACGTATATATGTTTATATTGTGGGCGTCTCGGTTTTGAAAACCTTTTGTTTTCTCTCCTTCTTCACATCATAAATGAGTAGAGCTTGTGAATTATTTTATCATTTATTTGGGGGAGTTTTATAGTAAACTCTAGAGTGGGTTACAATTTAGAAAGGATGAAAATAGGTAAATGTTTCTTTGTTTTAAAGCTTGAACGTAGGGGACCAAATTTTGTGACTTTACCTTTCTATCTTCAACTTTATCGCATTGGTCCGCTAGTAGCTTAAAGAGTCTTCTTGTGGAGGGATGTTTTGCTACGGAGTGTATCCATATTATTTTATTTATTTATTAATGATACTCTTAGTTTCTTACCTATCTATCTATCTATATATATATATATATATGCTAAAATGGGAGCCATAGCCACATGTATTTTTAAATTACTAACTTCCAAAAGTTACTATCCGACACAGGATACCAAAATTAGATGATTGATTGCAAATGAATACGAGGTTTGAGTACCGGCACGGCCGTACCAAAACAAAAGTTGCTCTTTTTGTGGAAGCATTGGACAAATAAAGCTAAGCTCCAACCAACAAATTCGAACTCAAAATAGGGGTTTCTTGAGATAATATATAAATAATTTTGGTGTCTCGGTACATTTAAAACTTGGATTGTCACTGTACTGGAAAAATTAATCCCATTTTTTGGGTCGGTTTATAAGGTAGGCGTTGCACCAATTGCTTTCCTAAATTCTTTTTAGGAATTTGTTCATTCATATCACCAACCCTTTTAATAAATGTTTTTTTTTTTTTTCTTTTTAGGTGTATTTGATGATGAATTTAGAGGACGTCATTATTATATCATATGAAGTCATATAATTGAAAGAGGAAATTAAAGGTCAAATTAAAAAGAAAGTTGGGCCATCAGCATAGCATTGGACAACAATGTGGCCCATAATCCTCTATATCATTTGGGATCACTACCCAACATGCCATACCCACAGGGAACATCTTCTCTTTTGTATGATGTCCAACTTCACAGCTTTACATTCTATTTCTCATTCCATATCCATATTTATTGTATTCAACCTCTACCCTAAACTATATATCAAACCACTACTTACAATTTTATCACAGAATTCAACACTGTTTTTGAGAAATCAAGTCATTTTTTCTTTTTTGAAAAGCACACCCTACTATGAAATGGATACTAGTTGGATTTTTACACCTCGGTTAGTGATTATTTGATTTTTTGTTGTTTAGTTTTTATAATTAAATCTATCACCACTAATTACATCCGTAAATTTTTCGTTTTATAATCTACTTTTTACTCATGTTTTCCAAAATTCAAGTTTTTTTTTAAGTTGAAAAAGGGGTTTTTTTTTCTTTTTTTGAATTTTACTTAGATTTAAACTTTTGTACGTAAAGAATGATACACATCAATGTAAGAACTTGAGGGAAAAAAAGAAGTATGTAAAGAGTGTGTGAAAAAATCATGAATTACATGAATTCAAATTTTCAAATCCTTGCCACCCCATCTTTAGAAACTTGGACTGAATGATTGAAGGAATCTGCTCTACCTCGCTCTGTTTTTTTTTTTTTTTTTTTAATTATTATGATAGAGATCCCACGTAGAAACAACAAGCCCTATTATGCGAGCAAGTGTAAATTCTCCAAGAATTTTGAATGTGTTGTATAGCATCTCATGTGGGTTCGTTTGGTGTGGACAGGAGTAGGTGTAGGTGTTGATTGTTAAGATCACCTAATGAGGGTGTCATGTTTAGGACAAGATTTGGATCATGTGTGCTCTAGTTGTCCTTTGGATTTTGTGGAGACATCACAATGACATTTCTTCCATGAAATAGGAGTTCTATCTAATATGAAATATCTTAGTTTAATTGACATTATATTTAGTGTTCGGAGATCTGTGGTTCAAAACTATAAGAAAAAAGAGTAGAAATTGGAGTATCTTAGGTTTCTTTTTATTATTATTTGACAGATTTGGATGACTCGTTGGCAACCTGGGGTGCAAAAGGGTGTATTGGCTATCTCGATTCAACCTTAACCCCTCTCTGTCTTCCACTTCTTCTTCATCTATTGTTAGTCTTTGGAAGTTTACTGTTGATGCAGCGAGGGCCAGTGAGAAGGGTAAAGATGAGCTGCTTAGGTGTTTAGTTAGAAATCATTGTAGATGCTTTTTGTTGGAGAAGAAATGGGATATTTTGTCTTCTTGAAGTTGAGGT

mRNA sequence

TGGAGCTTCTTACTGAATGCTAAGAACAACACCGCTTGTAACGGTCTGAGTATCTCCGTCAGCTCATTCAGCGTACGGATCCTCAATTTGTCGGCTTGTTGGATGAGTCTCACCATTTCCCCATCTTGCTTTTCCAAAGCCCTTTCCAATTCCTCAATCCCGATTTGCTCCTTCATTGATCTCATCGCAATTCCCACCACCGTCTGATCCGCCATCTCCTCCTGAACCCTCGCCAGCTCCGACGTCAGTCTCTCCTCTTCCTTTATCGTTCTCATCTGCAGACTGTCCAGCTGCTCCATTTGCTGCGGCGTCAACTCTCCAGCTATGTCCTCCATCGACTTCATCCCCTGAAGAAATTGCGCCATTCTGGTTTCCAGTTCGTACCCGGTGAGGGAATAGGCTAAACGGATGAAAACAGTGGGTCGGCAACCGGCGATCCAGAGGAGTGAAGCTTCTCTTGTGCTACACCAAACAGGGGCGAAGAATAGCGACACGTCGTTTTTGGCTAGCTGCATTCGTCGATCAATGTAGTCTTGGAATTCCTCGATGCTCTTGTCTACAAGCTGGGTGAGTTGGCGCTCTGCTTCTTCATGGTTTGAATTTACTCTGTTTTCGATGGCGCTAAGAGCTTGGAAAAGCTCCTTCTGGCTGTCCTCTTGAAGCTTCATCCACTCCAGAAAACACCGCTCCGATGCAGCTTGGTCGCTGGTGTATTTGATGATGAATTTAGAGGACGTCATTATTATATCATATGAAGTCATATAATTGAAAGAGGAAATTAAAGGTCAAATTAAAAAGAAAGTTGGGCCATCAGCATAGCATTGGACAACAATGTGGCCCATAATCCTCTATATCATTTGGGATCACTACCCAACATGCCATACCCACAGGGAACATCTTCTCTTTTATTTGGATGACTCGTTGGCAACCTGGGGTGCAAAAGGGTGTATTGGCTATCTCGATTCAACCTTAACCCCTCTCTGTCTTCCACTTCTTCTTCATCTATTGTTAGTCTTTGGAAGTTTACTGTTGATGCAGCGAGGGCCAGTGAGAAGGGTAAAGATGAGCTGCTTAGGTGTTTAGTTAGAAATCATTGTAGATGCTTTTTGTTGGAGAAGAAATGGGATATTTTGTCTTCTTGAAGTTGAGGT

Coding sequence (CDS)

ATGTGGCCCATAATCCTCTATATCATTTGGGATCACTACCCAACATGCCATACCCACAGGGAACATCTTCTCTTTTATTTGGATGACTCGTTGGCAACCTGGGGTGCAAAAGGGTGTATTGGCTATCTCGATTCAACCTTAACCCCTCTCTGTCTTCCACTTCTTCTTCATCTATTGTTAGTCTTTGGAAGTTTACTGTTGATGCAGCGAGGGCCAGTGAGAAGGGTAAAGATGAGCTGCTTAGGTGTTTAG

Protein sequence

MWPIILYIIWDHYPTCHTHREHLLFYLDDSLATWGAKGCIGYLDSTLTPLCLPLLLHLLLVFGSLLLMQRGPVRRVKMSCLGV
Homology
The following BLAST results are available for this feature:
BLAST of Cmc08g0209061.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0209061.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0209061.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0209061.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc08g0209061Cmc08g0209061gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0209061.1-exonCmc08g0209061.1-exon-CMiso1.1chr08:1507289..1507532exon
Cmc08g0209061.1-exonCmc08g0209061.1-exon-CMiso1.1chr08:1508511..1508709exon
Cmc08g0209061.1-exonCmc08g0209061.1-exon-CMiso1.1chr08:1510398..1511105exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0209061.1-three_prime_utrCmc08g0209061.1-three_prime_utr-CMiso1.1chr08:1507289..1507356three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0209061.1-cdsCmc08g0209061.1-cds-CMiso1.1chr08:1507357..1507532CDS
Cmc08g0209061.1-cdsCmc08g0209061.1-cds-CMiso1.1chr08:1508511..1508586CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0209061.1-five_prime_utrCmc08g0209061.1-five_prime_utr-CMiso1.1chr08:1508587..1508709five_prime_UTR
Cmc08g0209061.1-five_prime_utrCmc08g0209061.1-five_prime_utr-CMiso1.1chr08:1510398..1511105five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc08g0209061.1Cmc08g0209061.1-proteinpolypeptide