Cmc08g0206781.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc08g0206781.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 220600 .. 225041 (+)
Sequence length2437
RNA-Seq ExpressionCmc08g0206781.1
SyntenyCmc08g0206781.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGTCATGTAGAACTATAATGTGTTGGTGACTTGAAGATGTAATCAGTTAAAATTCAGGTTCCCATGAGATTGAAAAAAAGTAAGGTGTCTTATAAACCATTTTATTTATTTATTTATTTTCTTTTGCAATATTCTGCTGAGCGGTCACTGTGAGCCTTTCATATATAGCAGATTGAGAAGAATGGGGGTGATTTAGGACGTTAATTACTTGCTTCCATCCATCGGACTCGTGAGAAGGTGAGAGTGGCTTCAATAATTGAGTAACAATGGTTGATATTTGAGAACGTATGTTGGTCATTACTTTGGTACGACTTGATTTTAATCTGGGATGACTTTAAATTTTTGTAATCATATGCAAGTGTGTGGGAACATGTAATGGCTTCAGAGGTAATCAGAGTCTTAAAAATTCCAATTAAGGCGCCTGGTTAAATGGGGAACCTGCATCTCGCTTCAAAGAAGTGAGGCTCCCTCAATGAAGCATGTTTCAAGTGCACGCCCTAGTGCCTCAAGTTTGGTTTACCTACTTTATTTTGAATATTTATAATTTGTTAGGAAGAAACGCATGAATGTTCTTACATCATCTATAGTTTCTTATAAACACTACATTCACTTTTAAGTTTCTATGTTTTGTTATTCTAAAAATTAGTTTTCAAAAACTTAGAATTTGATTTCAAATTCAAATGTTGTCTAAAAATTGAGAAAACCAGAATAGAAAAATTGGGAGAAAACCAAGATAAATTTCAAAAACAGAAAATTGAAAACAAAGTTGTTATCACATGGGTCCTTCGTTGATAGGTTTTCACCATTTTATGCGTGTGTGAAAAGTGCATTAAAGATTGCTTTTGCGATTTGTTTTCTATGTTACTGGTTAATAAACTCGCACACATAACTTTGTCTTTTAAGTTAAGCCCAGTAATTTCTAACTTTCCCCCTTTTGAAGGATTATGAGTTTTTTCTCCCTTGTTTAAATGCACTCGTGCTATTTTGCTTATCCATTAAAACCAGTGATGGATCTAAAAAAAATACTGACAGGGATTAAAAGAAAAATAAATGTTAAAAATTAAATAGTTTTCTTTATATATATTATATAAATACCATAGAGGCTCGAACCTCCAGACCTATACTAAATCTGCAGATTAAAACTAAATAACTTTCCACTCTTTTGGAACAGTGGTTCCTGAATCTGCTTCTCCTCGGTTTTAAACAACTCGTGCTTCTTGGAAAACCAAAAAGAAAAGCAAATGATAAGTGGCTGATGAACTCATTCTTGTTTTACCTTTCTTTTGAAGCCACTTCGAACTCTTGTCTTTTCTTGGTCACCTTTAAGGACTCTAAAAATGTCGATAGGAGTTACTGATTTAAGATCTGTTTGTATCTACCCTTCTAAACTTCTAGGGATATAGCATACGAAGAATTTGAAGGACAAACCAGTTCATATGATCCTAGAAAGAAGGAGGTAATGGCGCATGAACTATGAAATGGCACATGTGCAAGTTCAGGTACTCAGGGTGCAATGGGATAACAGTGACGCGCATGTTATTATATTACTGTCCTGGTAAACTTGAATAGTATCATAATATTGGCATATTGCTGCTTACGTTCTACTTAGAAACTACAAGTTAAAGTCGTTGTCGAAATTTAGTATTTATAATTTATATTCTTTATTTTCGTCAGAGTTGTTAATGTTTTGGCGGGGATACAGAGTCAGTCCATTGGTCGTATTTATTCTTTTTTTTATATTGATTTTCTTTGACTTTGAGAGCCCAAAAATCCTTTTCAGAGCACCTATCTAATGGGATTTTTTCTCTTTACAGACAGAAATTTTTTAGTCCTGAAGGACCTTCACCTGCCATTACTGGTCAAGCTGGGTGACGTGCAAATTGGTTTGTTGAAGTAAATGTGAAGTTCAGATGAATTCTCAGTATCATTAACATGTTTGTTGAGATATTTGCGATTTCCTTGATTTCTTAGTTTATTCTTTTTACTTTTAAATCTGACCTGCCAGCTTTTTCGATCTGCGACTTTTACATCGTTTCCTTGAGGCACATAGCGAGTCAAAGTGATGATGAACGGAGGTTCAATTTTGGCATATAGACTTTTTGACTTCCATTGTTCCACATTCTTATCTGGACCTGAAGTTCAAGTTTTGAGTCATGGTTCCAGTCTCATGTAAACAGATAACTAACTCCTTTGTTTTAGTTTTCTGTAACTTGATTGGCACCATTATTATGTACATACTACAGGATTGGAATTCATCTTTTAGTCTTTTAGGCTGCCGCTTATTTATTGAAACTCTTGATATACTTTTTTATTGGCTAGATATTTGTAGTTTCGTGCCACAGACAGATGATGGCTGTATGGGTGCCCATTTTTGTAGTAGTGAGAACAGAATAGTAAGTGCGACTTTGATTAAAATTATTTCATGAGTAAAATAAACCGACATATTGCATATATGATTTCTAGTTTTCCACATAGCTTTGGCTAGAACATCAATCTTTTAGAAATCAAGAAAAGACGGTACAACTCGTCCCTTCCAAATTAGTTCATGTTTTTATGATGTGATCATTAAAATTTTCTTGTGTTTGCAAAGACACGGAGGGATGTGGTTTTTCTTCAACAAACAATATGTTGACTTATCTCTTCGAGGTAACTATTTTTGCTAATTGCGAGAAATTGAGGATAATGAACATCAGAAGGTTAGGTATTAGAATGCACTTTTTTGTTATTCCATTCTTTAGTTTTCGCTAAAAAAATTCGGATCTTTTATGGTATAATCCAAAATACTACCTATTATATGCATCATTTTTCTAATTCTTGCATAAAATATTTGGTGTATAAAAGAATCTCAATATGCTTTTGTGAATTATAGTTTTAGACTTCTTTATAAGTTTCCACCACGGAGCAGCCCGATGGTTTCAATTTCTCATAACTTAATACCAGGTCTATAACTGTTATATGTTGTGCTTGTTTTCTCTTTCTTTTGCTTCGTATTAACTGGTTTTTAATTTATTGTTTTATCTTCCGATGTTCACAGGTTAACAGAGTTGACTCGTTGCCACTGCTACGTTTATTCATAATCCTCCTCGTTTATGAGAATGTTTCTGGTACAAGAGTAAATATATACTTGTAGTTACATAGAGGCAAACTTATGAGTTGAATTAGGCCTAGAGATGAGTATACCTAACCTATTGATTTGAATAATGGCATTAGCTGAACTAACCCCACCCAACCCAATCAATTAAGTTGAGGTTGAATGAAGTCAAGCTAAAGACAAGAGTTGATGAACCAACCTGACTTTGTTAGACTCTGGCCCAAACCATTTAATGAGTTGTATTCATCGTGTACTTTTTGGGTCATTATGGCCAACATTGAGGGTTGTTTGGCTTTTCAAATGCTTATTGAAAAATCATTCCAAACAGGTGTTAAGGCACATACGCACTGGCAGTCTCTCCTTTCCACATGTCAACTCAAGTGTTGTAGCAGCGTAGGAAAACCCCATAACTTAAGTTTTGATGCATTTTAATTAATCTAAACTTCTGTGAGGGTGTTGCAGGTATTGAAAATACTGTGTTGTACTTGCACAGGGCTGAGATGATGTATGATGTATTGGTGCAAGAAATATCAATATGGATTTAACAGTGTTATCAGCCAGCCATCAGTTCAGGTACACCCTCCCACTCAATGCTCCCTTCTTCCACTTAATTTCCGACTTTGCTTTTCCTTCAAATATCATCAATGTGTTTAGGCCCATTTTCAACATACCAATTTTTACGGTGCTTTCTTTTCCATAATGATTAGATGAAATTTAAAGTATATGTGAATCCATTTGCGTATAAACCAATGGTTTGTGCATTTCACTAGCAAAATTGTGTGGTATATTTGACTTTTATTATTATTATTATTGAAAACTGTTCAATAGTTTGAGTGTTGTATTTGTAAATGTCAAAAATAGGTGAGTATTGCAATTTGCAAGATGTGAAATTTATGTTACTTTTGATGTGGTCAGGAAATTGAAATGGGGGCCAGCGGAAGAATTGTGCCTTATGTGGAATTGATAGAAACGTTACCCCTCCGGCTCCCAAAAATTTATTGGAATTGCGAACGCCAAACTATTTTTAACGCTGATAAATCAAGACTTGTCTTATTATTGCTGAGATTTGTAATTAAATTCCTTCAATTTTAAAAATCAAGTAAACTTAGGATGGGAGAATTTGAACCCAACACCTTATGTCCTCGAAAATATATAAGCTCATGTTGGCAAATTCTTACTCTCACCTATCGTTGAATTGAATCCTTGAAGTAGAAAAATTATTTTCAAATAAAAGTGCGGGCAAGAGACTTAATTATGGATGACTAATACTTTAGTACTATGATTGATACTAGAGAGTAGGTTTTTTCACGATTTACATCATTGCAATAGCAGGATGTACAATACCTAT

mRNA sequence

TATGGTCATGTAGAACTATAATGTGTTGGTGACTTGAAGATGTAATCAGTTAAAATTCAGGTTCCCATGAGATTGAAAAAAAATTGAGAAGAATGGGGGTGATTTAGGACGTTAATTACTTGCTTCCATCCATCGGACTCGTGAGAAGGGATATAGCATACGAAGAATTTGAAGGACAAACCAGTTCATATGATCCTAGAAAGAAGGAGGTAATGGCGCATGAACTATGAAATGGCACATGTGCAAGTTCAGAAATTTTTTAGTCCTGAAGGACCTTCACCTGCCATTACTGGTCAAGCTGGGTGACGTGCAAATTGGTTTGTTGAAGTAAATGTGAAGTTCAGATGAATTCTCAGTATCATTAACATGTTTGTTGAGATATTTGCGATTTCCTTGATTTCTTAGTTTATTCTTTTTACTTTTAAATCTGACCTGCCAGCTTTTTCGATCTGCGACTTTTACATCGTTTCCTTGAGGCACATAGCGAGTCAAAGTGATGATGAACGGAGGTTCAATTTTGGCATATAGACTTTTTGACTTCCATTGTTCCACATTCTTATCTGGACCTGAAGTTCAAGTTTTGAGTCATGGTTCCAGTCTCATGTAAACAGATAACTAACTCCTTTGTTTTAGTTTTCTGTAACTTGATTGGCACCATTATTATGTACATACTACAGGATTGGAATTCATCTTTTAGTCTTTTAGGCTGCCGCTTATTTATTGAAACTCTTGATATACTTTTTTATTGGCTAGATATTTGTAGTTTCGTGCCACAGACAGATGATGGCTGTATGGGTGCCCATTTTTGTAGTAGTGAGAACAGAATAGTAAGTGCGACTTTGATTAAAATTATTTCATGAGTAAAATAAACCGACATATTGCATATATGATTTCTAGTTTTCCACATAGCTTTGGCTAGAACATCAATCTTTTAGAAATCAAGAAAAGACGGTACAACTCGTCCCTTCCAAATTAGTTCATGTTTTTATGATGTGATCATTAAAATTTTCTTGTGTTTGCAAAGACACGGAGGGATGTGGTTTTTCTTCAACAAACAATATGTTGACTTATCTCTTCGAGGTAACTATTTTTGCTAATTGCGAGAAATTGAGGATAATGAACATCAGAAGGTTAGGTATTAGAATGCACTTTTTTGTTATTCCATTCTTTAGTTTTCGCTAAAAAAATTCGGATCTTTTATGGTATAATCCAAAATACTACCTATTATATGCATCATTTTTCTAATTCTTGCATAAAATATTTGGTGTATAAAAGAATCTCAATATGCTTTTGTGAATTATAGTTTTAGACTTCTTTATAAGTTTCCACCACGGAGCAGCCCGATGGTTTCAATTTCTCATAACTTAATACCAGGTTAACAGAGTTGACTCGTTGCCACTGCTACGTTTATTCATAATCCTCCTCGTTTATGAGAATGTTTCTGGTACAAGAGTAAATATATACTTGTAGTTACATAGAGGCAAACTTATGAGTTGAATTAGGCCTAGAGATGAGTATACCTAACCTATTGATTTGAATAATGGCATTAGCTGAACTAACCCCACCCAACCCAATCAATTAAGTTGAGGTTGAATGAAGTCAAGCTAAAGACAAGAGTTGATGAACCAACCTGACTTTGTTAGACTCTGGCCCAAACCATTTAATGAGTTGTATTCATCGTGTACTTTTTGGGTCATTATGGCCAACATTGAGGGTTGTTTGGCTTTTCAAATGCTTATTGAAAAATCATTCCAAACAGGTGTTAAGGCACATACGCACTGGCAGTCTCTCCTTTCCACATGTCAACTCAAGTGTTGTAGCAGCGTAGGAAAACCCCATAACTTAAGTTTTGATGCATTTTAATTAATCTAAACTTCTGTGAGGGTGTTGCAGGTATTGAAAATACTGTGTTGTACTTGCACAGGGCTGAGATGATGTATGATGTATTGGTGCAAGAAATATCAATATGGATTTAACAGTGTTATCAGCCAGCCATCAGTTCAGGAAATTGAAATGGGGGCCAGCGGAAGAATTGTGCCTTATGTGGAATTGATAGAAACGTTACCCCTCCGGCTCCCAAAAATTTATTGGAATTGCGAACGCCAAACTATTTTTAACGCTGATAAATCAAGACTTGTCTTATTATTGCTGAGATTTGTAATTAAATTCCTTCAATTTTAAAAATCAAGTAAACTTAGGATGGGAGAATTTGAACCCAACACCTTATGTCCTCGAAAATATATAAGCTCATGTTGGCAAATTCTTACTCTCACCTATCGTTGAATTGAATCCTTGAAGTAGAAAAATTATTTTCAAATAAAAGTGCGGGCAAGAGACTTAATTATGGATGACTAATACTTTAGTACTATGATTGATACTAGAGAGTAGGTTTTTTCACGATTTACATCATTGCAATAGCAGGATGTACAATACCTAT

Coding sequence (CDS)

ATGGTTCCAGTCTCATGTAAACAGATAACTAACTCCTTTGTTTTAGTTTTCTGTAACTTGATTGGCACCATTATTATGTACATACTACAGGATTGGAATTCATCTTTTAGTCTTTTAGGCTGCCGCTTATTTATTGAAACTCTTGATATACTTTTTTATTGGCTAGATATTTGTAGTTTCGTGCCACAGACAGATGATGGCTGTATGGGTGCCCATTTTTGTAGTAGTGAGAACAGAATAGTAAGTGCGACTTTGATTAAAATTATTTCATGA

Protein sequence

MVPVSCKQITNSFVLVFCNLIGTIIMYILQDWNSSFSLLGCRLFIETLDILFYWLDICSFVPQTDDGCMGAHFCSSENRIVSATLIKIIS
Homology
The following BLAST results are available for this feature:
BLAST of Cmc08g0206781.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0206781.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0206781.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc08g0206781.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc08g0206781Cmc08g0206781gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0206781.1-exonCmc08g0206781.1-exon-CMiso1.1chr08:220600..220681exon
Cmc08g0206781.1-exonCmc08g0206781.1-exon-CMiso1.1chr08:220774..220839exon
Cmc08g0206781.1-exonCmc08g0206781.1-exon-CMiso1.1chr08:221998..222101exon
Cmc08g0206781.1-exonCmc08g0206781.1-exon-CMiso1.1chr08:222421..223542exon
Cmc08g0206781.1-exonCmc08g0206781.1-exon-CMiso1.1chr08:223637..224266exon
Cmc08g0206781.1-exonCmc08g0206781.1-exon-CMiso1.1chr08:224609..225041exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0206781.1-five_prime_utrCmc08g0206781.1-five_prime_utr-CMiso1.1chr08:220600..220681five_prime_UTR
Cmc08g0206781.1-five_prime_utrCmc08g0206781.1-five_prime_utr-CMiso1.1chr08:220774..220839five_prime_UTR
Cmc08g0206781.1-five_prime_utrCmc08g0206781.1-five_prime_utr-CMiso1.1chr08:221998..222101five_prime_UTR
Cmc08g0206781.1-five_prime_utrCmc08g0206781.1-five_prime_utr-CMiso1.1chr08:222421..222755five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0206781.1-cdsCmc08g0206781.1-cds-CMiso1.1chr08:222756..223028CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc08g0206781.1-three_prime_utrCmc08g0206781.1-three_prime_utr-CMiso1.1chr08:223029..223542three_prime_UTR
Cmc08g0206781.1-three_prime_utrCmc08g0206781.1-three_prime_utr-CMiso1.1chr08:223637..224266three_prime_UTR
Cmc08g0206781.1-three_prime_utrCmc08g0206781.1-three_prime_utr-CMiso1.1chr08:224609..225041three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc08g0206781.1Cmc08g0206781.1-proteinpolypeptide