Cmc07g0204581.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0204581.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 25862166 .. 25863646 (-)
Sequence length	1364
RNA-Seq Expression	Cmc07g0204581.1
Synteny	Cmc07g0204581.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACAAAATTTATTCATCGGAGAGAATGAACGAATACTTTTCGATTACTCTTCTCCATATGAACACTTTGATGAATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATAAGAATTGGCATATATAAATCCATCAATAGAATTAATCATCTTCTCCAACTCGCCTCCGGTTCAGTCGGTTTTTACAGAAGCAATTTCGAAATGGCCAAGCAGTTACTGGCGTATTTGCTCATCTTCGTGCTAAGATTATCCAATGGAGAATCCACTCCCATCTCTGCAAAAGTATCATCGCAAGTCGTCAGATCAGTCAGTACAGCCGTCAAAACACTCTCCATTCTACCAGCATCGCGTGCATCGATCGATTCCACTCCAGCTTTTAGATCTTCAATAGCCATATCGAAATTCTCCAGGCAAGTATCGTAACAAGCGATTTCTGTCTCCGATGCTGATGAATCTTTACGAAGTGAATTCAATGTTGCAATTGCTTTCGTTACCTCTTTAATCGATTCCTCAATCTCTGTTTTCAGTGCTGAAGCTGGATCCACTTTCGTTCCCTCGATGTGAGATGAAATCGAAGTTTTACATAGTTGAGGATTGCTCGTCACATCGCAAATCTCCACCAGATTCGTCTTCACAGTCGATGCTGCCGTCGATATCAAACCATCCGAATGCAAATAGTCCAAACCAAGTAGTCCTGAGTCTTCTTCATCAGATATTTCGTTAGAGGAAGATTGATCAGACGTCGATGTTTGTGGTGAGGTTGCCTCTGGTGGCTGCGAAACGGTGGTAACGGCCGGCGGTGACTGATCAGGGGCAACTTGAGGGGAAACGGTTTGTTCAAGAAGTGGAGGAATGGCAGTGGATTCAACGTCGGTGATGTTGATGTTGAGAGGGACACAAATGGCAATGGCAGAGAAGAAGACAGAAGAGAAAGCGAGGAGGAGGAAGACATTATTGATATTATTATTGATGAGCTCCATTTTTATTCTGCTGTTCTCTTCCTCCAGAGAACAAGAGAAGATGAGAAAGGTGAAAAGAAAGGGGAGATGAATGAGATTGTGGAGGGAAATGATGATGGAAGAGATGGGCTTTGTAGAAGATGAACAACAACAACAGCCATTGAAGCTCGATTCAACTAACTCCTACAAATAGCTAAGCCTAATTTTCTTTTGCTCTGAAATTTTCTTATTGCATTTCCACCACAATTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTTACTATTTTTAACATTAACAACAACCATTTTTAGAAATTCTGTTGGATATCCATCCATTCTTTCAGAACTAAAATACCCAAAATCAAAGGCTACATTTTTCAAATTCCTATCTCTATTACTTCTTTATTTCCTAATATATCATTTGCAGATTTTTTCTAGAATGTATCAATAATCTAACTATAATGTATCATAATTTTTGTTTATA

mRNA sequence

CTTTACAAAATTTATTCATCGGAGAGAATGAACGAATACTTTTCGATTACTCTTCTCCATATGAACACTTTGATGAATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATAAGAATTGGCATATATAAATCCATCAATAGAATTAATCATCTTCTCCAACTCGCCTCCGGTTCAGTCGGTTTTTACAGAAGCAATTTCGAAATGGCCAAGCAGTTACTGGCGTATTTGCTCATCTTCGTGCTAAGATTATCCAATGGAGAATCCACTCCCATCTCTGCAAAAGTATCATCGCAAGTCGTCAGATCAGTCAGTACAGCCGTCAAAACACTCTCCATTCTACCAGCATCGCGTGCATCGATCGATTCCACTCCAGCTTTTAGATCTTCAATAGCCATATCGAAATTCTCCAGTGCTGAAGCTGGATCCACTTTCGTTCCCTCGATGTGAGATGAAATCGAAGTTTTACATAGTTGAGGATTGCTCGTCACATCGCAAATCTCCACCAGATTCGTCTTCACAGTCGATGCTGCCGTCGATATCAAACCATCCGAATGCAAATAGTCCAAACCAAGTAGTCCTGAGTCTTCTTCATCAGATATTTCGTTAGAGGAAGATTGATCAGACGTCGATGTTTGTGGTGAGGTTGCCTCTGGTGGCTGCGAAACGGTGGTAACGGCCGGCGGTGACTGATCAGGGGCAACTTGAGGGGAAACGGTTTGTTCAAGAAGTGGAGGAATGGCAGTGGATTCAACGTCGGTGATGTTGATGTTGAGAGGGACACAAATGGCAATGGCAGAGAAGAAGACAGAAGAGAAAGCGAGGAGGAGGAAGACATTATTGATATTATTATTGATGAGCTCCATTTTTATTCTGCTGTTCTCTTCCTCCAGAGAACAAGAGAAGATGAGAAAGGTGAAAAGAAAGGGGAGATGAATGAGATTGTGGAGGGAAATGATGATGGAAGAGATGGGCTTTGTAGAAGATGAACAACAACAACAGCCATTGAAGCTCGATTCAACTAACTCCTACAAATAGCTAAGCCTAATTTTCTTTTGCTCTGAAATTTTCTTATTGCATTTCCACCACAATTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTTACTATTTTTAACATTAACAACAACCATTTTTAGAAATTCTGTTGGATATCCATCCATTCTTTCAGAACTAAAATACCCAAAATCAAAGGCTACATTTTTCAAATTCCTATCTCTATTACTTCTTTATTTCCTAATATATCATTTGCAGATTTTTTCTAGAATGTATCAATAATCTAACTATAATGTATCATAATTTTTGTTTATA

Coding sequence (CDS)

ATGGCCAAGCAGTTACTGGCGTATTTGCTCATCTTCGTGCTAAGATTATCCAATGGAGAATCCACTCCCATCTCTGCAAAAGTATCATCGCAAGTCGTCAGATCAGTCAGTACAGCCGTCAAAACACTCTCCATTCTACCAGCATCGCGTGCATCGATCGATTCCACTCCAGCTTTTAGATCTTCAATAGCCATATCGAAATTCTCCAGTGCTGAAGCTGGATCCACTTTCGTTCCCTCGATGTGA

Protein sequence

MAKQLLAYLLIFVLRLSNGESTPISAKVSSQVVRSVSTAVKTLSILPASRASIDSTPAFRSSIAISKFSSAEAGSTFVPSM

Homology

The following BLAST results are available for this feature:

BLAST of Cmc07g0204581.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0204581.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0204581.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0204581.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0204581	Cmc07g0204581	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0204581.1-exon	Cmc07g0204581.1-exon-CMiso1.1chr07:25862166..25863086	exon
Cmc07g0204581.1-exon	Cmc07g0204581.1-exon-CMiso1.1chr07:25863204..25863646	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0204581.1-three_prime_utr	Cmc07g0204581.1-three_prime_utr-CMiso1.1chr07:25862166..25863049	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0204581.1-cds	Cmc07g0204581.1-cds-CMiso1.1chr07:25863050..25863086	CDS
Cmc07g0204581.1-cds	Cmc07g0204581.1-cds-CMiso1.1chr07:25863204..25863412	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0204581.1-five_prime_utr	Cmc07g0204581.1-five_prime_utr-CMiso1.1chr07:25863413..25863646	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0204581.1	Cmc07g0204581.1-protein	polypeptide