Cmc07g0200641.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0200641.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 23196495 .. 23199735 (+)
Sequence length	3241
RNA-Seq Expression	Cmc07g0200641.1
Synteny	Cmc07g0200641.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATTATTTTATTTTTCCTTTTTTTGTTTTTTTTTTCTAGACCTTATTATTCATGAAGAAGTTTCAAAATGGAAAAACTATTCATTTTTAGGAGAGAATGGCATTCCATAAGTAAATCAAGTTTAATCTGTATTATTCTTTTCACATTTGATAACTTTTGTTGGATTAGCTTAATTTGAGTACCATTAATCCTTTCACATTTGATAACTTTTGTTGAGTATTTTAATTAGATAATTAATCACCAAAATTTTTAGGTAGAAAAAAATGTTAGATATTAGCAAATATGAGACCATGCAATTTTTTTTCTTCTTATTTTTCATTTGCCCTATCTATTCTTTTTAGCATTTTTCTTAGACTCTATTGCTATATTCTTTAAGAAACATTGTCAAACATATCCATTACAATTATGTAAAGGTAGTTTGATTTTCAAATTTTCAATTTGAGTCATAATTTGATTTAATATATAAACAATAAGAGTAATTATTACTTCGGAAAAAGAAAGGAAAAATGTAGTAAATTCTAGCCATTTTAACATGTTAGTTCATCTTGTGAGTAATCGGTGTTGCTACCAAAGGAATTCAAAAGGTATAATAATAACAAAGAACCAAAAAAAATCAAAACTTTTAAACCTATAAAAACTAAAAGATTTAATTTAATGTAAAAATGATGGGAGGAAGTAAAAGACAAAGAAAAGTAAAGAGAAAAAAAAGGCATGTGATTGTTTTCATATCTTTTCCACAAAAGTTGATAACACAAATGATGAAAATTGCACAAAAATTAAAAATAAGAAAAAAAACTAATAATATGAATAAGTTTAAGGAGAAAAATATAATAATGAAATTGTGAAGAAGAGAGATTATGGCGGCTGAGGAATCACCCCCTAAATTCCGCCTCTAATCACTCCCTCTAATCTAATTATTTTCATATATTTATATTGAATTATGATGATGATGATGATGATGATGAAGATTGAATAATAATAATAATTATATGAATAATTAATGAGGAAATAATTAAAAATAGATCTCTGTTATTTACAGGATAATAATAAATATAGTTAGGAAGAAAACGAAGGTGTTTCAATTATGTTTGATAATGGCGGATTGTTAATTAACGAAGATGATTCTCTATTTCTCTTTCTCTCTCTCTACTGTAATTCTCTCTTTTCTTTTTCATCATTTTCTTCCAATTTTCTTTGATTTCTTCTTTTTTTTTTTTTTTGAACTAATCAGAAGAACAAATCCATGGTTCCACCATACCTTCATTTCTAGCTCTTAAATTCTCCACTGCTTTATCGCCGAGGAATCCCGACGAATTTCCACCACCGGCGGTGTACCTGATCAATTTCCCGTTCAGATTTCCGTTACTAGATCTTAAATTGATACCTTGTTGATTCGATTCTCCAACGCCACCCCCCATGACCCAGTTCGCCGGAGTATGATGGTGGCCGTTGTTGTTGTTGTTGTTGATGTTGTGGTTGCCGTTGCTTCTGGGTAAGCCTTGACCGGCCGGTGAGAGGCCATGGCCACCGTGGGTAGTTAAACCGAACTCCTCGAAAATACCCATTTTGAGATTCTGTTCATTGGACGAAGAAATCAATTTGTTGGGGTTGGATTGAAACATGTTTTGAATATCAAAAATTGGGTTTTGCAAATTGCTGCCGGCGAGAAAAGTCGAAGGCGACGGAGAAAGAAACGGCGCTTTTTGTGGAAATGGTCGGAGAAGGTAAGTCTGTTGTGTGGAATTAGGTACAACGTCTAAATGTGTAGAAGATGATGTTCTGTTACCGCCACCACCACCACCACCACCGAACAGATCAAATCTCGCCCCGGCGTTTCTCGTAAACGGAGAAGAAGATGAAGAAGCCGTAAACGGCGGAGCTGGAATTCCGGTAAATTCCTGAACCATAGCACGAAAATTCGTCGTATCCGTCGTTAAAACCGTCGTCGGAGCTCGTCGTGAAGCTCTCGGCCGCTTCTTCGAGTTTCTACCGGTGTTCACTGCACCGCCACCACCGCTGGCACCGGCGCTGGCACAATTATTAGGAATGTTTTGCAAATCAGTGTGATCAGAAGGAGCGAAGGAATTAGTAGCGTCAGATGGATGGTTATTGTAATTCTGGACGGCAGAGTAATTATTAGAAATTGGGGATAAATTGTGATCGGTGGTTCCAGAATTGGGAGGTGGAGGATGGAGATCGGAGGGTATTTGGTCGGATCTGACGGTTCTGGACCAAAGCATATCGAGATTGAGAAGTGGGTTTTGATTAGAAAGGTGTGAAGATCGAGGATCAAATAAATTGGAGAGAGGATCAAAGATGGCGGCGGCAGAGGCGGAGGATTGAGAATGGAAGTTTTGAGGGAAAGAAGTGAAGGCGGCGGAGGCGGAGATAGAGTCGGAAGGTGACTCAAACTCGTCGTCGCCGCCGCTAGAGGATTGCATACTTCCACTATTTCCAGAATCCATGGAGAGAAAACAGAAAAAAGAAAAAAAAAAAGGGTGGGAAAAAACCGATAACTGAAGAAGAGGGTGTGAAGAAGAAAGGCAATAAATAAACTCGGTTGAGTAATAAAGGCAGTGATGATCTAAAAAACAAAAGGACAATTTGTTTTATTTTTATTTTTGCTTTTGGGATTTGAAAATAGAGGAAAAAGAGAAAAAGAGAAGAAACCCAACTGACAAATATGGGGGATTAATTAAGAATTTTTTTTAAAAAAATATAATAATATAGAAATTTCATCGTCAAGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGTTTTTAATGGCAAATAGAAAAAAAATAAAAAACAAGTGGAGAATTAGGGTTTCTGTGTTTGGAGAGAGAGAATGGAAAAAGGAAGGGGAAAAAAATTAATTAAAAAAAAGAGGGTGCTGTAGGCTTTTCAATGGATTTAAGAGAGAGGATGAAAATAATTAAAGAAAATTAAAAATATATAATTAAAAAAAAAAAAAAAAAAGAGAAAAAGATAATAAAGGATGAGAGTGGGGTAAGGTGAAGGGAGAGAGAAGATAAGTGATCCAATTTGGTCAATCTAATAAGTATACCAATTTTGATTCTCTACGTGAAAAATAAAAACACCATTTTACAATATACCTTAACCTTATATTTTTATTTTAATCCTTCACTCTACTTTTAACTTCAACTTTCACTATTTCTTTTTTATTCCTTTTTTATTTTCGACTTTCATTTCTTTTTTTTGATCTCTCTCTCTCT

mRNA sequence

ATTTTATTATTTTATTTTTCCTTTTTTTGTTTTTTTTTTCTAGACCTTATTATTCATGAAGAAGTTTCAAAATGGAAAAACTATTCATTTTTAGGAGAGAATGGCATTCCATAAGTAAATCAAGTTTAATCTGTATTATTCTTTTCACATTTGATAACTTTTGTTGGATTAGCTTAATTTGAGTACCATTAATCCTTTCACATTTGATAACTTTTGTTGAGTATTTTAATTAGATAATTAATCACCAAAATTTTTAGGTAGAAAAAAATGTTAGATATTAGCAAATATGAGACCATGCAATTTTTTTTCTTCTTATTTTTCATTTGCCCTATCTATTCTTTTTAGCATTTTTCTTAGACTCTATTGCTATATTCTTTAAGAAACATTGTCAAACATATCCATTACAATTATGTAAAGGTAGTTTGATTTTCAAATTTTCAATTTGAGTCATAATTTGATTTAATATATAAACAATAAGAGTAATTATTACTTCGGAAAAAGAAAGGAAAAATGTAGTAAATTCTAGCCATTTTAACATGTTAGTTCATCTTGTGAGTAATCGGTGTTGCTACCAAAGGAATTCAAAAGGTATAATAATAACAAAGAACCAAAAAAAATCAAAACTTTTAAACCTATAAAAACTAAAAGATTTAATTTAATGTAAAAATGATGGGAGGAAGTAAAAGACAAAGAAAAGTAAAGAGAAAAAAAAGGCATGTGATTGTTTTCATATCTTTTCCACAAAAGTTGATAACACAAATGATGAAAATTGCACAAAAATTAAAAATAAGAAAAAAAACTAATAATATGAATAAGTTTAAGGAGAAAAATATAATAATGAAATTGTGAAGAAGAGAGATTATGGCGGCTGAGGAATCACCCCCTAAATTCCGCCTCTAATCACTCCCTCTAATCTAATTATTTTCATATATTTATATTGAATTATGATGATGATGATGATGATGATGAAGATTGAATAATAATAATAATTATATGAATAATTAATGAGGAAATAATTAAAAATAGATCTCTGTTATTTACAGGATAATAATAAATATAGTTAGGAAGAAAACGAAGGTGTTTCAATTATGTTTGATAATGGCGGATTGTTAATTAACGAAGATGATTCTCTATTTCTCTTTCTCTCTCTCTACTGTAATTCTCTCTTTTCTTTTTCATCATTTTCTTCCAATTTTCTTTGATTTCTTCTTTTTTTTTTTTTTTGAACTAATCAGAAGAACAAATCCATGGTTCCACCATACCTTCATTTCTAGCTCTTAAATTCTCCACTGCTTTATCGCCGAGGAATCCCGACGAATTTCCACCACCGGCGGTGTACCTGATCAATTTCCCGTTCAGATTTCCGTTACTAGATCTTAAATTGATACCTTGTTGATTCGATTCTCCAACGCCACCCCCCATGACCCAGTTCGCCGGAGTATGATGGTGGCCGTTGTTGTTGTTGTTGTTGATGTTGTGGTTGCCGTTGCTTCTGGGTAAGCCTTGACCGGCCGGTGAGAGGCCATGGCCACCGTGGGTAGTTAAACCGAACTCCTCGAAAATACCCATTTTGAGATTCTGTTCATTGGACGAAGAAATCAATTTGTTGGGGTTGGATTGAAACATGTTTTGAATATCAAAAATTGGGTTTTGCAAATTGCTGCCGGCGAGAAAAGTCGAAGGCGACGGAGAAAGAAACGGCGCTTTTTGTGGAAATGGTCGGAGAAGGTAAGTCTGTTGTGTGGAATTAGGTACAACGTCTAAATGTGTAGAAGATGATGTTCTGTTACCGCCACCACCACCACCACCACCGAACAGATCAAATCTCGCCCCGGCGTTTCTCGTAAACGGAGAAGAAGATGAAGAAGCCGTAAACGGCGGAGCTGGAATTCCGGTAAATTCCTGAACCATAGCACGAAAATTCGTCGTATCCGTCGTTAAAACCGTCGTCGGAGCTCGTCGTGAAGCTCTCGGCCGCTTCTTCGAGTTTCTACCGGTGTTCACTGCACCGCCACCACCGCTGGCACCGGCGCTGGCACAATTATTAGGAATGTTTTGCAAATCAGTGTGATCAGAAGGAGCGAAGGAATTAGTAGCGTCAGATGGATGGTTATTGTAATTCTGGACGGCAGAGTAATTATTAGAAATTGGGGATAAATTGTGATCGGTGGTTCCAGAATTGGGAGGTGGAGGATGGAGATCGGAGGGTATTTGGTCGGATCTGACGGTTCTGGACCAAAGCATATCGAGATTGAGAAGTGGGTTTTGATTAGAAAGGTGTGAAGATCGAGGATCAAATAAATTGGAGAGAGGATCAAAGATGGCGGCGGCAGAGGCGGAGGATTGAGAATGGAAGTTTTGAGGGAAAGAAGTGAAGGCGGCGGAGGCGGAGATAGAGTCGGAAGGTGACTCAAACTCGTCGTCGCCGCCGCTAGAGGATTGCATACTTCCACTATTTCCAGAATCCATGGAGAGAAAACAGAAAAAAGAAAAAAAAAAAGGGTGGGAAAAAACCGATAACTGAAGAAGAGGGTGTGAAGAAGAAAGGCAATAAATAAACTCGGTTGAGTAATAAAGGCAGTGATGATCTAAAAAACAAAAGGACAATTTGTTTTATTTTTATTTTTGCTTTTGGGATTTGAAAATAGAGGAAAAAGAGAAAAAGAGAAGAAACCCAACTGACAAATATGGGGGATTAATTAAGAATTTTTTTTAAAAAAATATAATAATATAGAAATTTCATCGTCAAGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGTTTTTAATGGCAAATAGAAAAAAAATAAAAAACAAGTGGAGAATTAGGGTTTCTGTGTTTGGAGAGAGAGAATGGAAAAAGGAAGGGGAAAAAAATTAATTAAAAAAAAGAGGGTGCTGTAGGCTTTTCAATGGATTTAAGAGAGAGGATGAAAATAATTAAAGAAAATTAAAAATATATAATTAAAAAAAAAAAAAAAAAAGAGAAAAAGATAATAAAGGATGAGAGTGGGGTAAGGTGAAGGGAGAGAGAAGATAAGTGATCCAATTTGGTCAATCTAATAAGTATACCAATTTTGATTCTCTACGTGAAAAATAAAAACACCATTTTACAATATACCTTAACCTTATATTTTTATTTTAATCCTTCACTCTACTTTTAACTTCAACTTTCACTATTTCTTTTTTATTCCTTTTTTATTTTCGACTTTCATTTCTTTTTTTTGATCTCTCTCTCTCT

Coding sequence (CDS)

ATGATGGGAGGAAGTAAAAGACAAAGAAAAGTAAAGAGAAAAAAAAGGCATGTGATTGTTTTCATATCTTTTCCACAAAAGTTGATAACACAAATGATGAAAATTGCACAAAAATTAAAAATAAGAAAAAAAACTAATAATATGAATAAGTTTAAGGAGAAAAATATAATAATGAAATTGTGA

Protein sequence

MMGGSKRQRKVKRKKRHVIVFISFPQKLITQMMKIAQKLKIRKKTNNMNKFKEKNIIMKL

Homology

The following BLAST results are available for this feature:

BLAST of Cmc07g0200641.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0200641.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0200641.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0200641.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0200641	Cmc07g0200641	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200641.1-exon	Cmc07g0200641.1-exon-CMiso1.1chr07:23196495..23199735	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200641.1-five_prime_utr	Cmc07g0200641.1-five_prime_utr-CMiso1.1chr07:23196495..23197160	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200641.1-cds	Cmc07g0200641.1-cds-CMiso1.1chr07:23197161..23197343	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200641.1-three_prime_utr	Cmc07g0200641.1-three_prime_utr-CMiso1.1chr07:23197344..23199735	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0200641.1	Cmc07g0200641.1-protein	polypeptide